Calponin homology domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04750 AT5G35700 |
| fragaria_vesca | FvH4_6g41540 FvH4_6g41540 |
| malus_domestica | MD09G1119000.v1.1 MD17G1109900.v1.1 |
| prunus_persica | Prupe.3G205200_v2.0.a1 |
| pyrus_communis | pycom09g04390 pycom17g10220 |
| rosa_chinensis | RchiOBHm_Chr2g0157211 |
| rosa_laevigata | RLG00000020972 |
| rosa_multiflora | Rmu_sc0006282.1_g000007 Rmu_sc0039256.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092410 |
| rosa_rugosa | Rorug02G0458400 Rorug02G0458500 |
| rosa_samantha | Rh2AG523900 Rh2BG538300 Rh2CG508700 Rh2DG547200 |
| rosa_wichuraiana | Rw2G043330 Rw2G043390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 506, 704, 1379 |
| Acc36I | ACCTGC | 2 cut(s) | 856, 924 |
| Acc65I | GGTACC | 1 cut(s) | 170 |
| AccB1I | GGYRCC | 1 cut(s) | 170 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 718 |
| AccI | GTMKAC | 1 cut(s) | 1886 |
| AciI | CCGC | 4 cut(s) | 450, 1195, 1667, 1934 |
| AclWI | GGATC | 5 cut(s) | 26, 410, 440, 703, 1257 |
| AcoI | YGGCCR | 1 cut(s) | 1591 |
| AcsI | RAATTY | 2 cut(s) | 832, 874 |
| AcuI | CTGAAG | 4 cut(s) | 681, 863, 1600, 1815 |
| AcyI | GRCGYC | 1 cut(s) | 1902 |
| AfaI | GTAC | 7 cut(s) | 73, 172, 337, 681, 914, 946, 1853 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 718 |
| AflIII | ACRYGT | 1 cut(s) | 949 |
| AgsI | TTSAA | 8 cut(s) | 157, 427, 758, 892, 1131, 1277, 1351, 1735 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1882 |
| AhlI | ACTAGT | 1 cut(s) | 1598 |
| AjnI | CCWGG | 2 cut(s) | 520, 1297 |
| Alw21I | GWGCWC | 2 cut(s) | 351, 792 |
| Alw26I | GTCTC | 4 cut(s) | 31, 605, 956, 1897 |
| Alw44I | GTGCAC | 1 cut(s) | 347 |
| AlwI | GGATC | 5 cut(s) | 26, 410, 440, 703, 1257 |
| AoxI | GGCC | 2 cut(s) | 258, 1591 |
| ApaLI | GTGCAC | 1 cut(s) | 347 |
| ApeKI | GCWGC | 2 cut(s) | 624, 1838 |
| ApoI | RAATTY | 2 cut(s) | 832, 874 |
| Asp718I | GGTACC | 1 cut(s) | 170 |
| AspLEI | GCGC | 2 cut(s) | 1090, 1401 |
| AspS9I | GGNCC | 2 cut(s) | 258, 525 |
| AsuHPI | GGTGA | 5 cut(s) | 911, 1287, 1822, 1949, 2054 |
| AsuII | TTCGAA | 2 cut(s) | 95, 147 |
| AvaII | GGWCC | 1 cut(s) | 525 |
| BaeGI | GKGCMC | 1 cut(s) | 351 |
| BanI | GGYRCC | 1 cut(s) | 170 |
| BanII | GRGCYC | 1 cut(s) | 792 |
| BauI | CACGAG | 2 cut(s) | 279, 1176 |
| BbsI | GAAGAC | 2 cut(s) | 673, 1905 |
| Bbv12I | GWGCWC | 2 cut(s) | 351, 792 |
| BbvI | GCAGC | 2 cut(s) | 611, 1850 |
| BccI | CCATC | 6 cut(s) | 476, 536, 846, 1907, 1955, 2033 |
| BceAI | ACGGC | 1 cut(s) | 1072 |
| BciT130I | CCWGG | 2 cut(s) | 522, 1299 |
| BcoDI | GTCTC | 4 cut(s) | 31, 605, 956, 1897 |
| BcuI | ACTAGT | 1 cut(s) | 1598 |
| BfaI | CTAG | 3 cut(s) | 6, 1599, 1635 |
| BfmI | CTRYAG | 1 cut(s) | 1929 |
| BfuAI | ACCTGC | 2 cut(s) | 856, 924 |
| BisI | GCNGC | 2 cut(s) | 625, 1839 |
| BlpI | GCTNAGC | 1 cut(s) | 1060 |
| BlsI | GCNGC | 2 cut(s) | 626, 1840 |
| BmcAI | AGTACT | 1 cut(s) | 337 |
| Bme1390I | CCNGG | 2 cut(s) | 522, 1299 |
| Bme18I | GGWCC | 1 cut(s) | 525 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1882 |
| BmgT120I | GGNCC | 2 cut(s) | 258, 525 |
| BmiI | GGNNCC | 5 cut(s) | 172, 526, 804, 1694, 1859 |
| BmrFI | CCNGG | 2 cut(s) | 522, 1299 |
| BmrI | ACTGGG | 1 cut(s) | 1573 |
| BmsI | GCATC | 5 cut(s) | 769, 1537, 1815, 1854, 2047 |
| BmuI | ACTGGG | 1 cut(s) | 1573 |
| BpiI | GAAGAC | 2 cut(s) | 673, 1905 |
| BpmI | CTGGAG | 3 cut(s) | 918, 1711, 1876 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1060 |
| Bpu14I | TTCGAA | 2 cut(s) | 95, 147 |
| BpuEI | CTTGAG | 3 cut(s) | 427, 1019, 1534 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1829 |
| BsaHI | GRCGYC | 1 cut(s) | 1902 |
| BsaI | GGTCTC | 2 cut(s) | 605, 956 |
| BsaJI | CCNNGG | 3 cut(s) | 35, 521, 569 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 718 |
| Bse1I | ACTGG | 7 cut(s) | 333, 765, 1316, 1568, 1694, 1859, 1977 |
| Bse3DI | GCAATG | 1 cut(s) | 1375 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1829 |
| BseBI | CCWGG | 2 cut(s) | 522, 1299 |
| BseDI | CCNNGG | 3 cut(s) | 35, 521, 569 |
| BseGI | GGATG | 5 cut(s) | 190, 784, 834, 1778, 2035 |
| BseJI | GATNNNNATC | 1 cut(s) | 1829 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 718 |
| BseMI | GCAATG | 1 cut(s) | 1375 |
| BseMII | CTCAG | 7 cut(s) | 710, 788, 999, 1074, 1137, 1496, 1908 |
| BseNI | ACTGG | 7 cut(s) | 333, 765, 1316, 1568, 1694, 1859, 1977 |
| BseRI | GAGGAG | 3 cut(s) | 297, 800, 1733 |
| BseSI | GKGCMC | 1 cut(s) | 351 |
| BseXI | GCAGC | 2 cut(s) | 611, 1850 |
| BseYI | CCCAGC | 1 cut(s) | 1421 |
| BsgI | GTGCAG | 1 cut(s) | 610 |
| BshFI | GGCC | 2 cut(s) | 260, 1593 |
| BshNI | GGYRCC | 1 cut(s) | 170 |
| BsiHKAI | GWGCWC | 2 cut(s) | 351, 792 |
| BslFI | GGGAC | 3 cut(s) | 538, 1634, 1965 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 718 |
| BsmAI | GTCTC | 4 cut(s) | 31, 605, 956, 1897 |
| BsmFI | GGGAC | 3 cut(s) | 538, 1634, 1965 |
| BsmI | GAATGC | 1 cut(s) | 1741 |
| BsnI | GGCC | 2 cut(s) | 260, 1593 |
| Bso31I | GGTCTC | 2 cut(s) | 605, 956 |
| Bsp119I | TTCGAA | 2 cut(s) | 95, 147 |
| Bsp1286I | GDGCHC | 2 cut(s) | 351, 792 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1060 |
| Bsp19I | CCATGG | 1 cut(s) | 569 |
| BspACI | CCGC | 4 cut(s) | 450, 1195, 1667, 1934 |
| BspANI | GGCC | 2 cut(s) | 260, 1593 |
| BspCNI | CTCAG | 7 cut(s) | 709, 787, 1000, 1073, 1138, 1497, 1907 |
| BspLI | GGNNCC | 5 cut(s) | 172, 526, 804, 1694, 1859 |
| BspMI | ACCTGC | 2 cut(s) | 856, 924 |
| BspPI | GGATC | 5 cut(s) | 26, 410, 440, 703, 1257 |
| BspQI | GCTCTTC | 1 cut(s) | 422 |
| BspT104I | TTCGAA | 2 cut(s) | 95, 147 |
| BspT107I | GGYRCC | 1 cut(s) | 170 |
| BspTNI | GGTCTC | 2 cut(s) | 605, 956 |
| BsrDI | GCAATG | 1 cut(s) | 1375 |
| BsrI | ACTGG | 7 cut(s) | 333, 765, 1316, 1568, 1694, 1859, 1977 |
| BssECI | CCNNGG | 3 cut(s) | 35, 521, 569 |
| BssNI | GRCGYC | 1 cut(s) | 1902 |
| BssSI | CACGAG | 2 cut(s) | 279, 1176 |
| BssT1I | CCWWGG | 2 cut(s) | 35, 569 |
| Bst2BI | CACGAG | 2 cut(s) | 279, 1176 |
| Bst2UI | CCWGG | 2 cut(s) | 522, 1299 |
| Bst6I | CTCTTC | 2 cut(s) | 422, 1577 |
| BstACI | GRCGYC | 1 cut(s) | 1902 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 458 |
| BstBI | TTCGAA | 2 cut(s) | 95, 147 |
| BstC8I | GCNNGC | 3 cut(s) | 276, 1005, 1843 |
| BstDSI | CCRYGG | 1 cut(s) | 569 |
| BstF5I | GGATG | 5 cut(s) | 190, 784, 834, 1778, 2035 |
| BstHHI | GCGC | 2 cut(s) | 1090, 1401 |
| BstMAI | GTCTC | 4 cut(s) | 31, 605, 956, 1897 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 458, 1085 |
| BstNI | CCWGG | 2 cut(s) | 522, 1299 |
| BstNSI | RCATGY | 2 cut(s) | 395, 953 |
| BstSCI | CCNGG | 2 cut(s) | 520, 1297 |
| BstSFI | CTRYAG | 1 cut(s) | 1929 |
| BstSLI | GKGCMC | 1 cut(s) | 351 |
| BstV1I | GCAGC | 2 cut(s) | 611, 1850 |
| BstV2I | GAAGAC | 2 cut(s) | 673, 1905 |
| BstX2I | RGATCY | 2 cut(s) | 708, 1249 |
| BstYI | RGATCY | 2 cut(s) | 708, 1249 |
| BsuRI | GGCC | 2 cut(s) | 260, 1593 |
| BtgI | CCRYGG | 1 cut(s) | 569 |
| BtsCI | GGATG | 5 cut(s) | 190, 784, 834, 1778, 2035 |
| BtsIMutI | CAGTG | 5 cut(s) | 120, 636, 1759, 1905, 1983 |
| BveI | ACCTGC | 2 cut(s) | 856, 924 |
| Cac8I | GCNNGC | 3 cut(s) | 276, 1005, 1843 |
| CfoI | GCGC | 2 cut(s) | 1090, 1401 |
| Cfr13I | GGNCC | 2 cut(s) | 258, 525 |
| CseI | GACGC | 2 cut(s) | 1910, 1928 |
| Csp6I | GTAC | 7 cut(s) | 72, 171, 336, 680, 913, 945, 1852 |
| CviAII | CATG | 7 cut(s) | 353, 392, 570, 793, 950, 1849, 2061 |
| CviQI | GTAC | 7 cut(s) | 72, 171, 336, 680, 913, 945, 1852 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1882 |
| EaeI | YGGCCR | 1 cut(s) | 1591 |
| Eam1104I | CTCTTC | 2 cut(s) | 422, 1577 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1882 |
| EarI | CTCTTC | 2 cut(s) | 422, 1577 |
| EciI | GGCGGA | 1 cut(s) | 1184 |
| Ecl136II | GAGCTC | 1 cut(s) | 790 |
| Eco130I | CCWWGG | 2 cut(s) | 35, 569 |
| Eco24I | GRGCYC | 1 cut(s) | 792 |
| Eco31I | GGTCTC | 2 cut(s) | 605, 956 |
| Eco32I | GATATC | 2 cut(s) | 693, 1801 |
| Eco47I | GGWCC | 1 cut(s) | 525 |
| Eco53kI | GAGCTC | 1 cut(s) | 790 |
| Eco57I | CTGAAG | 4 cut(s) | 681, 863, 1600, 1815 |
| EcoICRI | GAGCTC | 1 cut(s) | 790 |
| EcoRII | CCWGG | 2 cut(s) | 520, 1297 |
| EcoRV | GATATC | 2 cut(s) | 693, 1801 |
| EcoT14I | CCWWGG | 2 cut(s) | 35, 569 |
| EcoT22I | ATGCAT | 1 cut(s) | 2062 |
| EcoT38I | GRGCYC | 1 cut(s) | 792 |
| ErhI | CCWWGG | 2 cut(s) | 35, 569 |
| FaeI | CATG | 7 cut(s) | 356, 395, 573, 796, 953, 1852, 2064 |
| FaqI | GGGAC | 3 cut(s) | 538, 1634, 1965 |
| FatI | CATG | 7 cut(s) | 352, 391, 569, 792, 949, 1848, 2060 |
| FauI | CCCGC | 2 cut(s) | 457, 1927 |
| FauNDI | CATATG | 1 cut(s) | 907 |
| FblI | GTMKAC | 1 cut(s) | 1886 |
| Fnu4HI | GCNGC | 2 cut(s) | 625, 1839 |
| FokI | GGATG | 5 cut(s) | 197, 791, 841, 1785, 2042 |
| FriOI | GRGCYC | 1 cut(s) | 792 |
| Fsp4HI | GCNGC | 2 cut(s) | 625, 1839 |
| FspBI | CTAG | 3 cut(s) | 6, 1599, 1635 |
| GlaI | GCGC | 2 cut(s) | 1089, 1400 |
| GluI | GCNGC | 2 cut(s) | 625, 1839 |
| GsaI | CCCAGC | 1 cut(s) | 1425 |
| GsuI | CTGGAG | 3 cut(s) | 918, 1711, 1876 |
| HaeIII | GGCC | 2 cut(s) | 260, 1593 |
| HgaI | GACGC | 2 cut(s) | 1910, 1928 |
| HhaI | GCGC | 2 cut(s) | 1090, 1401 |
| Hin1I | GRCGYC | 1 cut(s) | 1902 |
| Hin1II | CATG | 7 cut(s) | 356, 395, 573, 796, 953, 1852, 2064 |
| Hin6I | GCGC | 2 cut(s) | 1088, 1399 |
| HinP1I | GCGC | 2 cut(s) | 1088, 1399 |
| HincII | GTYRAC | 4 cut(s) | 637, 1123, 1309, 1687 |
| HindII | GTYRAC | 4 cut(s) | 637, 1123, 1309, 1687 |
| HindIII | AAGCTT | 3 cut(s) | 159, 500, 1766 |
| HinfI | GANTC | 5 cut(s) | 365, 1127, 1627, 1883, 1973 |
| HphI | GGTGA | 5 cut(s) | 911, 1287, 1822, 1949, 2054 |
| Hpy99I | CGWCG | 2 cut(s) | 536, 1922 |
| HpyAV | CCTTC | 6 cut(s) | 367, 656, 756, 886, 1384, 2005 |
| HpyCH4IV | ACGT | 2 cut(s) | 12, 115 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 458, 1085 |
| HpySE526I | ACGT | 2 cut(s) | 12, 115 |
| Hsp92I | GRCGYC | 1 cut(s) | 1902 |
| Hsp92II | CATG | 7 cut(s) | 356, 395, 573, 796, 953, 1852, 2064 |
| HspAI | GCGC | 2 cut(s) | 1088, 1399 |
| KpnI | GGTACC | 1 cut(s) | 174 |
| LguI | GCTCTTC | 1 cut(s) | 422 |
| LmnI | GCTCC | 7 cut(s) | 787, 808, 937, 1500, 1692, 1857, 1964 |
| Lsp1109I | GCAGC | 2 cut(s) | 611, 1850 |
| LweI | GCATC | 5 cut(s) | 769, 1537, 1815, 1854, 2047 |
| MaeI | CTAG | 3 cut(s) | 6, 1599, 1635 |
| MaeII | ACGT | 2 cut(s) | 12, 115 |
| MaeIII | GTNAC | 4 cut(s) | 8, 39, 868, 1699 |
| MflI | RGATCY | 2 cut(s) | 708, 1249 |
| MhlI | GDGCHC | 2 cut(s) | 351, 792 |
| MlyI | GAGTC | 2 cut(s) | 1892, 1982 |
| MmeI | TCCRAC | 3 cut(s) | 106, 1522, 1888 |
| Mph1103I | ATGCAT | 1 cut(s) | 2062 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1107, 1340, 1468, 1808 |
| MspR9I | CCNGG | 2 cut(s) | 522, 1299 |
| Mva1269I | GAATGC | 1 cut(s) | 1741 |
| MvaI | CCWGG | 2 cut(s) | 522, 1299 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 458, 1085 |
| NcoI | CCATGG | 1 cut(s) | 569 |
| NdeI | CATATG | 1 cut(s) | 907 |
| NlaIII | CATG | 7 cut(s) | 356, 395, 573, 796, 953, 1852, 2064 |
| NlaIV | GGNNCC | 5 cut(s) | 172, 526, 804, 1694, 1859 |
| NsiI | ATGCAT | 1 cut(s) | 2062 |
| NspI | RCATGY | 2 cut(s) | 395, 953 |
| NspV | TTCGAA | 2 cut(s) | 95, 147 |
| PciI | ACATGT | 1 cut(s) | 949 |
| PciSI | GCTCTTC | 1 cut(s) | 422 |
| PctI | GAATGC | 1 cut(s) | 1741 |
| PfeI | GAWTC | 3 cut(s) | 365, 1127, 1627 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 718 |
| PkrI | GCNGC | 2 cut(s) | 626, 1840 |
| PleI | GAGTC | 2 cut(s) | 1891, 1981 |
| PpsI | GAGTC | 2 cut(s) | 1891, 1981 |
| PscI | ACATGT | 1 cut(s) | 949 |
| PsiI | TTATAA | 3 cut(s) | 506, 704, 1379 |
| Psp124BI | GAGCTC | 1 cut(s) | 792 |
| Psp6I | CCWGG | 2 cut(s) | 520, 1297 |
| PspFI | CCCAGC | 1 cut(s) | 1421 |
| PspGI | CCWGG | 2 cut(s) | 520, 1297 |
| PspN4I | GGNNCC | 5 cut(s) | 172, 526, 804, 1694, 1859 |
| PspPI | GGNCC | 2 cut(s) | 258, 525 |
| PsuI | RGATCY | 2 cut(s) | 708, 1249 |
| RsaI | GTAC | 7 cut(s) | 73, 172, 337, 681, 914, 946, 1853 |
| RsaNI | GTAC | 7 cut(s) | 72, 171, 336, 680, 913, 945, 1852 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1107, 1340, 1468, 1808 |
| SacI | GAGCTC | 1 cut(s) | 792 |
| SapI | GCTCTTC | 1 cut(s) | 422 |
| SatI | GCNGC | 2 cut(s) | 625, 1839 |
| Sau96I | GGNCC | 2 cut(s) | 258, 525 |
| ScaI | AGTACT | 1 cut(s) | 337 |
| SchI | GAGTC | 2 cut(s) | 1892, 1982 |
| ScrFI | CCNGG | 2 cut(s) | 522, 1299 |
| SduI | GDGCHC | 2 cut(s) | 351, 792 |
| SfaNI | GCATC | 5 cut(s) | 769, 1537, 1815, 1854, 2047 |
| SfcI | CTRYAG | 1 cut(s) | 1929 |
| SfuI | TTCGAA | 2 cut(s) | 95, 147 |
| SinI | GGWCC | 1 cut(s) | 525 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1107, 1340, 1468, 1808 |
| SmlI | CTYRAG | 3 cut(s) | 406, 998, 1513 |
| SmoI | CTYRAG | 3 cut(s) | 406, 998, 1513 |
| SpeI | ACTAGT | 1 cut(s) | 1598 |
| SsiI | CCGC | 4 cut(s) | 450, 1195, 1667, 1934 |
| SspI | AATATT | 1 cut(s) | 1095 |
| SspMI | CTAG | 3 cut(s) | 6, 1599, 1635 |
| SstI | GAGCTC | 1 cut(s) | 792 |
| StyD4I | CCNGG | 2 cut(s) | 520, 1297 |
| StyI | CCWWGG | 2 cut(s) | 35, 569 |
| TaiI | ACGT | 2 cut(s) | 15, 118 |
| TaqI | TCGA | 5 cut(s) | 95, 147, 237, 531, 1284 |
| TaqII | GACCGA | 1 cut(s) | 1294 |
| TatI | WGTACW | 3 cut(s) | 335, 944, 1851 |
| TfiI | GAWTC | 3 cut(s) | 365, 1127, 1627 |
| TscAI | CASTG | 5 cut(s) | 127, 636, 1759, 1912, 1990 |
| TseI | GCWGC | 2 cut(s) | 624, 1838 |
| TspDTI | ATGAA | 6 cut(s) | 246, 309, 378, 845, 873, 1386 |
| TspRI | CASTG | 5 cut(s) | 127, 636, 1759, 1912, 1990 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 718 |
| VneI | GTGCAC | 1 cut(s) | 347 |
| VpaK11BI | GGWCC | 1 cut(s) | 525 |
| XapI | RAATTY | 2 cut(s) | 832, 874 |
| XceI | RCATGY | 2 cut(s) | 395, 953 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1048 |
| XmiI | GTMKAC | 1 cut(s) | 1886 |
| XspI | CTAG | 3 cut(s) | 6, 1599, 1635 |
| ZrmI | AGTACT | 1 cut(s) | 337 |
| Zsp2I | ATGCAT | 1 cut(s) | 2062 |