Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0008959

Physical Location & Seq

Genomic Coordinates Reverse (-)

9474038 .. 9478451

Gene Structure 4414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1109900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGTCTGCATTTGAAGGAGTGATTGTTTCTGACACATGGCTGCAGAGCCAATTCACTCAAGTCGAGCTTCGCACCCTCAAATCGAAATTTCTTTCGATAAGGAATCAGTCTGGTCGAGTCACATTGGGAGATTTGCCGCCTGTTTTTGCGAAATTGAAGGCTTTCAGTGAAATGTTTAATGAAGATGAGATTAAATCAATCTTATTGGAGTCGGGCAAGGACACTGGCGAAGATACTGATTTTGAGTCCTATCTTCGGGCACATTTGAATTTGCAAGCGCGTGCAAATGCAAAATCTGGTGGTTCAAAACAATCTTCCTTTCTCAAGGCAACCACAACAACGGTTCACCACGCAATTAATACTTCTGAGAAGTCTTCTTATGTTGCCCACATTAATGGCTACCTGGCAGAAGATCCGTTCTTGAAGAAGTATCTTCCTTTGGATCCATCTACAAATGCTCTATTTGATCTTGCAAAAGATGGAGTACTACTCTGTAAGCTTATCAATATAGCTGTTCCTGGGACTATAGATGAGCGAGCTATCAACACTAAAGCAGTCCTTAATCCGTGGGAGAGGAATGAGAACCATACCCTTTGTCTTAATTCTGCGAAGGCTATCGGCTGTACTGTAGTTAATATCGGCACACAGGACTTGGTTGAAGCAAGACCCCATCTTGTACTTGGCTTGATTTCTCAAATAATCAAGATTCAACTGTTAGCTGATCTCAATCTGAAGAAAACTCCACAACTCGTGGAATTGGTGGATGACAGCCAGGATGTAGAGGAGCTCTTGGGTCTGCCACCCGATAAGGTTCTACTGAAATGGATGAATTTTCATCTGAAGAAAGCTGGCTACGAAAAGCAAGTCACAAACTTTTCTTCTGATGTAAAGGATGGAGAGGCTTATGCTTACCTGCTTAATGCTCTTGCACCAGAGCACTCGGGCCCCGCTGCCTTGGATATGAAAGATCCTACAGCAAGAGCAAACCTGGTTCTTGAGCAAGCAGAGAAATTGGATTGCAAAAGATACCTTACTCCGAAAGACATTGTTGAGGGCTCACCAAATCTTAACCTTGCATTTGTTGCACAAATTTTCCAGCACAGGCAAGAAACAGTATTTCACAAAAATGGCCTGTCTGCTGATAGTAAAAAAATGTCCTTTGCTGAGATGATGACAGATGATGCTGAAACTTCTCGAGAAGAGAGATGCTTCCGGCTCTGGATTAACAGTCTTGGAACTGCTACCTATGTCAATAATCTTTTCGAAGATGTCAGAAATGGATGGGTTCTTTTAGAAGTGCTTGACAAAATTTCTTCAGGATCAGTCAACTGGAAGAAGGCATCAAAGCCTCCAATAAAAATGCCATTTAGAAAAGTCGAGAATGCCAACCAAGTTATAGAGATTGGAAAGCAATTAAATTTCTCCCTTGTGAATGTAGCAGGGAATGATATTGTGCAAGGAAATAAGAAGCTCGTACTTGCATTTTTATGGCAGTTGATGAGGTTTAGTATGCTTCAACTCTTGAGAAACTTGAGATCCCACTCCCAAGATAAAGCGGGTAAAGAGATTACTGACGCTGACATTCTAAATTGGGCGAACAAAAAAGTTAAGCAGGCGGGTAGAAACTCCCAAGTGGAGAGTTTCAAGGTAATTAATTTGACAATAGCTGTTCTCACTGACAGCTTTGATCCCATGGATAAAAATCTCTCAAGTGGAGTTTTCTTCCTCGAGCTTCTTAGTTCTGTGGAGCCAAGGGTGGTGAATTGGAGTCTTGCCACAAAGGGGGAAACTGAGGAAGATAAGAAGTTGAATGCAACGTATATAATCAGTGTGGCCAGAAAGCTAGGTTGCTCCATTTTCTTGTTACCAGAGGACATTATAGAGGTAAACCAGAAGATGATGCTTACTTTGACTGCAAGCATCATGTACTGGAGTCTGCAGCAACCGGGAGGGGAGGCGGAATCAAACCTTACCACTCCTGACGGGTCCCCTACAGCTTCTGCTGATGGCGAGAAGGAAGCAGCTTTGGCAAGTGCAGTCTCTAATTTGTCCGTGGATGCTTCAAACCATACCTCCCCACAGACAGAACACGAGAATCCCTCGAAGGTCGAAAATCGAAAAACGGACACTTCTGATGAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0030154 GO:0030312 GO:0032432 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051015 GO:0051017 GO:0051639 GO:0051704 GO:0051764 GO:0060560 GO:0061572 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

715

Amino Acids

79.22

Weight (kDa)

5.77

Isoelectric Point (pI)

35.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	152 - 235	3.1e-15	Calponin homology (CH) domain
CH	PF00307	268 - 369	6e-23	Calponin homology (CH) domain
CH	PF00307	400 - 502	3.6e-18	Calponin homology (CH) domain
CH	PF00307	525 - 643	1.3e-15	Calponin homology (CH) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04750 AT5G35700
fragaria_vesca	FvH4_6g41540 FvH4_6g41540
malus_domestica	MD09G1119000.v1.1 MD17G1109900.v1.1
prunus_persica	Prupe.3G205200_v2.0.a1
pyrus_communis	pycom09g04390 pycom17g10220
rosa_chinensis	RchiOBHm_Chr2g0157211
rosa_laevigata	RLG00000020972
rosa_multiflora	Rmu_sc0006282.1_g000007 Rmu_sc0039256.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092410
rosa_rugosa	Rorug02G0458400 Rorug02G0458500
rosa_samantha	Rh2AG523900 Rh2BG538300 Rh2CG508700 Rh2DG547200
rosa_wichuraiana	Rw2G043330 Rw2G043390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	921
AccII	CGCG	1 cut(s)	280
AciI	CCGC	5 cut(s)	137, 948, 1556, 1616, 1958
AclWI	GGATC	7 cut(s)	407, 437, 450, 962, 1327, 1530, 1682
AcoI	YGGCCR	1 cut(s)	1833
AcsI	RAATTY	6 cut(s)	86, 268, 829, 1089, 1308, 1417
AcuI	CTGAAG	3 cut(s)	752, 860, 1299
AfaI	GTAC	5 cut(s)	486, 625, 678, 1476, 1928
AfiI	CCNNNNNNNGG	2 cut(s)	255, 1782
AjnI	CCWGG	4 cut(s)	402, 517, 771, 987
Alw21I	GWGCWC	2 cut(s)	789, 939
Alw26I	GTCTC	1 cut(s)	2044
AlwI	GGATC	7 cut(s)	407, 437, 450, 962, 1327, 1530, 1682
AlwNI	CAGNNNCTG	1 cut(s)	2000
Ama87I	CYCGRG	3 cut(s)	940, 1194, 1727
AoxI	GGCC	3 cut(s)	943, 1129, 1833
ApaI	GGGCCC	1 cut(s)	947
ApeKI	GCWGC	4 cut(s)	40, 950, 1939, 2021
ApoI	RAATTY	6 cut(s)	86, 268, 829, 1089, 1308, 1417
ArsI	GACNNNNNNTTYG	2 cut(s)	849, 881
AseI	ATTAAT	3 cut(s)	357, 393, 1653
Asp700I	GAANNNNTTC	1 cut(s)	161
AspLEI	GCGC	1 cut(s)	280
AspS9I	GGNCC	3 cut(s)	943, 944, 1986
AsuC2I	CCSGG	1 cut(s)	1947
AsuHPI	GGTGA	3 cut(s)	338, 1050, 1771
AsuII	TTCGAA	1 cut(s)	1263
AvaI	CYCGRG	3 cut(s)	940, 1194, 1727
AvaII	GGWCC	1 cut(s)	1986
BaeGI	GKGCMC	2 cut(s)	262, 947
BalI	TGGCCA	1 cut(s)	1835
BamHI	GGATCC	1 cut(s)	442
BanII	GRGCYC	3 cut(s)	789, 947, 1058
BauI	CACGAG	2 cut(s)	749, 2090
BbsI	GAAGAC	1 cut(s)	366
Bbv12I	GWGCWC	2 cut(s)	789, 939
BbvI	GCAGC	4 cut(s)	27, 937, 1951, 2033
BccI	CCATC	6 cut(s)	454, 473, 678, 887, 1275, 2000
BciT130I	CCWGG	4 cut(s)	404, 519, 773, 989
BcnI	CCSGG	1 cut(s)	1947
BcoDI	GTCTC	1 cut(s)	2044
BfaI	CTAG	1 cut(s)	1844
BfmI	CTRYAG	6 cut(s)	41, 525, 627, 972, 1937, 1992
BfuAI	ACCTGC	1 cut(s)	921
BisI	GCNGC	5 cut(s)	41, 137, 951, 1940, 2022
BlsI	GCNGC	5 cut(s)	42, 138, 952, 1941, 2023
BmcAI	AGTACT	1 cut(s)	486
Bme1390I	CCNGG	5 cut(s)	404, 519, 773, 989, 1947
Bme18I	GGWCC	1 cut(s)	1986
BmeT110I	CYCGRG	3 cut(s)	940, 1194, 1727
BmgT120I	GGNCC	3 cut(s)	943, 944, 1986
BmiI	GGNNCC	6 cut(s)	444, 945, 946, 1749, 1987, 1988
BmrFI	CCNGG	5 cut(s)	404, 519, 773, 989, 1947
BmsI	GCATC	6 cut(s)	1171, 1196, 1349, 1890, 1929, 2047
BpiI	GAAGAC	1 cut(s)	366
BplI	GAGNNNNNCTC	4 cut(s)	474, 506, 2084, 2116
BpmI	CTGGAG	1 cut(s)	1951
Bpu14I	TTCGAA	1 cut(s)	1263
BpuEI	CTTGAG	6 cut(s)	42, 308, 1016, 1543, 1552, 1693
BpuMI	CCSGG	1 cut(s)	1947
BsaBI	GATNNNNATC	2 cut(s)	726, 1701
BsaJI	CCNNGG	6 cut(s)	518, 566, 954, 1692, 1751, 2052
BsaXI	ACNNNNNCTCC	4 cut(s)	9, 39, 2057, 2087
Bsc4I	CCNNNNNNNGG	2 cut(s)	255, 1782
Bse1I	ACTGG	3 cut(s)	229, 1334, 1934
Bse8I	GATNNNNATC	2 cut(s)	726, 1701
BseBI	CCWGG	4 cut(s)	404, 519, 773, 989
BseDI	CCNNGG	6 cut(s)	518, 566, 954, 1692, 1751, 2052
BseGI	GGATG	6 cut(s)	769, 781, 831, 898, 1286, 2062
BseJI	GATNNNNATC	2 cut(s)	726, 1701
BseLI	CCNNNNNNNGG	2 cut(s)	255, 1782
BseMII	CTCAG	3 cut(s)	357, 1155, 1782
BseNI	ACTGG	3 cut(s)	229, 1334, 1934
BseRI	GAGGAG	1 cut(s)	797
BseSI	GKGCMC	2 cut(s)	262, 947
BseXI	GCAGC	4 cut(s)	27, 937, 1951, 2033
BsgI	GTGCAG	1 cut(s)	2055
Bsh1236I	CGCG	1 cut(s)	280
BshFI	GGCC	3 cut(s)	945, 1131, 1835
BsiHKAI	GWGCWC	2 cut(s)	789, 939
BsiHKCI	CYCGRG	3 cut(s)	940, 1194, 1727
BsiSI	CCGG	2 cut(s)	1213, 1946
BslFI	GGGAC	2 cut(s)	535, 1972
BslI	CCNNNNNNNGG	2 cut(s)	255, 1782
BsmAI	GTCTC	1 cut(s)	2044
BsmFI	GGGAC	2 cut(s)	535, 1972
BsmI	GAATGC	2 cut(s)	1387, 1816
BsnI	GGCC	3 cut(s)	945, 1131, 1835
BsoBI	CYCGRG	3 cut(s)	940, 1194, 1727
Bsp119I	TTCGAA	1 cut(s)	1263
Bsp120I	GGGCCC	1 cut(s)	943
Bsp1286I	GDGCHC	5 cut(s)	262, 789, 939, 947, 1058
Bsp143I	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
Bsp19I	CCATGG	1 cut(s)	1692
BspACI	CCGC	5 cut(s)	137, 948, 1556, 1616, 1958
BspANI	GGCC	3 cut(s)	945, 1131, 1835
BspCNI	CTCAG	3 cut(s)	358, 1156, 1783
BspFNI	CGCG	1 cut(s)	280
BspLI	GGNNCC	6 cut(s)	444, 945, 946, 1749, 1987, 1988
BspMAI	CTGCAG	2 cut(s)	45, 1941
BspMI	ACCTGC	1 cut(s)	921
BspPI	GGATC	7 cut(s)	407, 437, 450, 962, 1327, 1530, 1682
BspT104I	TTCGAA	1 cut(s)	1263
BsrI	ACTGG	3 cut(s)	229, 1334, 1934
BssECI	CCNNGG	6 cut(s)	518, 566, 954, 1692, 1751, 2052
BssMI	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
BssSI	CACGAG	2 cut(s)	749, 2090
BssT1I	CCWWGG	3 cut(s)	954, 1692, 1751
Bst2BI	CACGAG	2 cut(s)	749, 2090
Bst2UI	CCWGG	4 cut(s)	404, 519, 773, 989
Bst4CI	ACNGT	5 cut(s)	343, 628, 714, 1114, 1229
Bst6I	CTCTTC	1 cut(s)	1194
BstAPI	GCANNNNNTGC	1 cut(s)	1082
BstBI	TTCGAA	1 cut(s)	1263
BstC8I	GCNNGC	7 cut(s)	276, 282, 537, 850, 1002, 1614, 1918
BstDEI	CTNAG	4 cut(s)	366, 1164, 1736, 1791
BstDSI	CCRYGG	3 cut(s)	566, 1692, 2052
BstF5I	GGATG	6 cut(s)	769, 781, 831, 898, 1286, 2062
BstFNI	CGCG	1 cut(s)	280
BstHHI	GCGC	1 cut(s)	280
BstKTI	GATC	8 cut(s)	415, 445, 469, 724, 970, 1322, 1538, 1690
BstMAI	GTCTC	1 cut(s)	2044
BstMBI	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
BstMWI	GCNNNNNNNGC	2 cut(s)	1082, 2027
BstNI	CCWGG	4 cut(s)	404, 519, 773, 989
BstSCI	CCNGG	5 cut(s)	402, 517, 771, 987, 1945
BstSFI	CTRYAG	6 cut(s)	41, 525, 627, 972, 1937, 1992
BstSLI	GKGCMC	2 cut(s)	262, 947
BstUI	CGCG	1 cut(s)	280
BstV1I	GCAGC	4 cut(s)	27, 937, 1951, 2033
BstV2I	GAAGAC	1 cut(s)	366
BstX2I	RGATCY	4 cut(s)	412, 442, 967, 1535
BstXI	CCANNNNNNTGG	1 cut(s)	395
BstYI	RGATCY	4 cut(s)	412, 442, 967, 1535
BsuRI	GGCC	3 cut(s)	945, 1131, 1835
BtgI	CCRYGG	3 cut(s)	566, 1692, 2052
BtsCI	GGATG	6 cut(s)	769, 781, 831, 898, 1286, 2062
BtsIMutI	CAGTG	4 cut(s)	172, 222, 1674, 1834
BveI	ACCTGC	1 cut(s)	921
Cac8I	GCNNGC	7 cut(s)	276, 282, 537, 850, 1002, 1614, 1918
CaiI	CAGNNNCTG	1 cut(s)	2000
CfoI	GCGC	1 cut(s)	280
Cfr13I	GGNCC	3 cut(s)	943, 944, 1986
CseI	GACGC	1 cut(s)	1583
CsiI	ACCWGGT	1 cut(s)	987
Csp6I	GTAC	5 cut(s)	485, 624, 677, 1475, 1927
CviAII	CATG	3 cut(s)	36, 1693, 1924
CviQI	GTAC	5 cut(s)	485, 624, 677, 1475, 1927
DdeI	CTNAG	4 cut(s)	366, 1164, 1736, 1791
DpnI	GATC	8 cut(s)	414, 444, 468, 723, 969, 1321, 1537, 1689
DpnII	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
EaeI	YGGCCR	1 cut(s)	1833
Eam1104I	CTCTTC	1 cut(s)	1194
EarI	CTCTTC	1 cut(s)	1194
EciI	GGCGGA	1 cut(s)	1973
Ecl136II	GAGCTC	1 cut(s)	787
Eco130I	CCWWGG	3 cut(s)	954, 1692, 1751
Eco24I	GRGCYC	3 cut(s)	789, 947, 1058
Eco47I	GGWCC	1 cut(s)	1986
Eco53kI	GAGCTC	1 cut(s)	787
Eco57I	CTGAAG	3 cut(s)	752, 860, 1299
Eco88I	CYCGRG	3 cut(s)	940, 1194, 1727
EcoICRI	GAGCTC	1 cut(s)	787
EcoO109I	RGGNCCY	2 cut(s)	944, 1986
EcoRII	CCWGG	4 cut(s)	402, 517, 771, 987
EcoT14I	CCWWGG	3 cut(s)	954, 1692, 1751
EcoT38I	GRGCYC	3 cut(s)	789, 947, 1058
ErhI	CCWWGG	3 cut(s)	954, 1692, 1751
FaeI	CATG	3 cut(s)	39, 1696, 1927
FalI	AAGNNNNNCTT	4 cut(s)	51, 83, 543, 575
FaqI	GGGAC	2 cut(s)	535, 1972
FatI	CATG	3 cut(s)	35, 1692, 1923
FauI	CCCGC	3 cut(s)	955, 1549, 1609
Fnu4HI	GCNGC	5 cut(s)	41, 137, 951, 1940, 2022
FokI	GGATG	6 cut(s)	776, 788, 838, 905, 1293, 2069
FriOI	GRGCYC	3 cut(s)	789, 947, 1058
Fsp4HI	GCNGC	5 cut(s)	41, 137, 951, 1940, 2022
FspBI	CTAG	1 cut(s)	1844
GlaI	GCGC	1 cut(s)	279
GluI	GCNGC	5 cut(s)	41, 137, 951, 1940, 2022
GsuI	CTGGAG	1 cut(s)	1951
HaeIII	GGCC	3 cut(s)	945, 1131, 1835
HapII	CCGG	2 cut(s)	1213, 1946
HgaI	GACGC	1 cut(s)	1583
HhaI	GCGC	1 cut(s)	280
Hin1II	CATG	3 cut(s)	39, 1696, 1927
Hin6I	GCGC	1 cut(s)	278
HinP1I	GCGC	1 cut(s)	278
HincII	GTYRAC	1 cut(s)	1327
HindII	GTYRAC	1 cut(s)	1327
HindIII	AAGCTT	1 cut(s)	497
HinfI	GANTC	9 cut(s)	103, 117, 209, 245, 706, 1768, 1933, 1961, 2095
HpaII	CCGG	2 cut(s)	1213, 1946
HphI	GGTGA	3 cut(s)	338, 1050, 1771
Hpy166II	GTNNAC	3 cut(s)	346, 1327, 1888
Hpy188I	TCNGA	8 cut(s)	31, 367, 732, 840, 883, 1038, 1274, 2134
Hpy8I	GTNNAC	3 cut(s)	346, 1327, 1888
HpyAV	CCTTC	6 cut(s)	8, 151, 604, 1330, 2008, 2098
HpyCH4III	ACNGT	5 cut(s)	343, 628, 714, 1114, 1229
HpyCH4IV	ACGT	1 cut(s)	1817
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1082, 2027
HpyF3I	CTNAG	4 cut(s)	366, 1164, 1736, 1791
HpySE526I	ACGT	1 cut(s)	1817
Hsp92II	CATG	3 cut(s)	39, 1696, 1927
HspAI	GCGC	1 cut(s)	278
KflI	GGGWCCC	1 cut(s)	1986
Kzo9I	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
LmnI	GCTCC	3 cut(s)	784, 1747, 1856
Lsp1109I	GCAGC	4 cut(s)	27, 937, 1951, 2033
LweI	GCATC	6 cut(s)	1171, 1196, 1349, 1890, 1929, 2047
MabI	ACCWGGT	1 cut(s)	987
MaeI	CTAG	1 cut(s)	1844
MaeII	ACGT	1 cut(s)	1817
MaeIII	GTNAC	3 cut(s)	118, 865, 1863
MalI	GATC	8 cut(s)	414, 444, 468, 723, 969, 1321, 1537, 1689
MboI	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
MflI	RGATCY	4 cut(s)	412, 442, 967, 1535
MhlI	GDGCHC	5 cut(s)	262, 789, 939, 947, 1058
MlsI	TGGCCA	1 cut(s)	1835
MluNI	TGGCCA	1 cut(s)	1835
MlyI	GAGTC	5 cut(s)	126, 218, 254, 1777, 1942
Mox20I	TGGCCA	1 cut(s)	1835
MroXI	GAANNNNTTC	1 cut(s)	161
MscI	TGGCCA	1 cut(s)	1835
MslI	CAYNNNNRTG	3 cut(s)	393, 1125, 1486
Msp20I	TGGCCA	1 cut(s)	1835
MspA1I	CMGCKG	1 cut(s)	950
MspI	CCGG	2 cut(s)	1213, 1946
MspR9I	CCNGG	5 cut(s)	404, 519, 773, 989, 1947
Mva1269I	GAATGC	2 cut(s)	1387, 1816
MvaI	CCWGG	4 cut(s)	404, 519, 773, 989
MvnI	CGCG	1 cut(s)	280
MwoI	GCNNNNNNNGC	2 cut(s)	1082, 2027
NciI	CCSGG	1 cut(s)	1947
NcoI	CCATGG	1 cut(s)	1692
NdeII	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
NlaIII	CATG	3 cut(s)	39, 1696, 1927
NlaIV	GGNNCC	6 cut(s)	444, 945, 946, 1749, 1987, 1988
NmuCI	GTSAC	2 cut(s)	118, 865
NspV	TTCGAA	1 cut(s)	1263
PaeR7I	CTCGAG	2 cut(s)	1194, 1727
PctI	GAATGC	2 cut(s)	1387, 1816
PdmI	GAANNNNTTC	1 cut(s)	161
PfeI	GAWTC	4 cut(s)	103, 706, 1961, 2095
PkrI	GCNGC	5 cut(s)	42, 138, 952, 1941, 2023
PleI	GAGTC	5 cut(s)	125, 217, 253, 1776, 1941
PpsI	GAGTC	5 cut(s)	125, 217, 253, 1776, 1941
PpuMI	RGGWCCY	1 cut(s)	1986
PshBI	ATTAAT	3 cut(s)	357, 393, 1653
Psp124BI	GAGCTC	1 cut(s)	789
Psp5II	RGGWCCY	1 cut(s)	1986
Psp6I	CCWGG	4 cut(s)	402, 517, 771, 987
PspGI	CCWGG	4 cut(s)	402, 517, 771, 987
PspN4I	GGNNCC	6 cut(s)	444, 945, 946, 1749, 1987, 1988
PspOMI	GGGCCC	1 cut(s)	943
PspPI	GGNCC	3 cut(s)	943, 944, 1986
PspPPI	RGGWCCY	1 cut(s)	1986
PspXI	VCTCGAGB	1 cut(s)	1727
PstI	CTGCAG	2 cut(s)	45, 1941
PstNI	CAGNNNCTG	1 cut(s)	2000
PsuI	RGATCY	4 cut(s)	412, 442, 967, 1535
RsaI	GTAC	5 cut(s)	486, 625, 678, 1476, 1928
RsaNI	GTAC	5 cut(s)	485, 624, 677, 1475, 1927
RseI	CAYNNNNRTG	3 cut(s)	393, 1125, 1486
SacI	GAGCTC	1 cut(s)	789
SatI	GCNGC	5 cut(s)	41, 137, 951, 1940, 2022
Sau3AI	GATC	8 cut(s)	412, 442, 466, 721, 967, 1319, 1535, 1687
Sau96I	GGNCC	3 cut(s)	943, 944, 1986
ScaI	AGTACT	1 cut(s)	486
SchI	GAGTC	5 cut(s)	126, 218, 254, 1777, 1942
ScrFI	CCNGG	5 cut(s)	404, 519, 773, 989, 1947
SduI	GDGCHC	5 cut(s)	262, 789, 939, 947, 1058
SexAI	ACCWGGT	1 cut(s)	987
SfaNI	GCATC	6 cut(s)	1171, 1196, 1349, 1890, 1929, 2047
SfcI	CTRYAG	6 cut(s)	41, 525, 627, 972, 1937, 1992
Sfr274I	CTCGAG	2 cut(s)	1194, 1727
SfuI	TTCGAA	1 cut(s)	1263
SinI	GGWCC	1 cut(s)	1986
SlaI	CTCGAG	2 cut(s)	1194, 1727
SmiMI	CAYNNNNRTG	3 cut(s)	393, 1125, 1486
SmlI	CTYRAG	8 cut(s)	57, 323, 995, 1194, 1522, 1531, 1708, 1727
SmoI	CTYRAG	8 cut(s)	57, 323, 995, 1194, 1522, 1531, 1708, 1727
SsiI	CCGC	5 cut(s)	137, 948, 1556, 1616, 1958
SspMI	CTAG	1 cut(s)	1844
SstI	GAGCTC	1 cut(s)	789
StyD4I	CCNGG	5 cut(s)	402, 517, 771, 987, 1945
StyI	CCWWGG	3 cut(s)	954, 1692, 1751
TaaI	ACNGT	5 cut(s)	343, 628, 714, 1114, 1229
TaiI	ACGT	1 cut(s)	1820
TatI	WGTACW	4 cut(s)	484, 623, 676, 1926
TauI	GCSGC	1 cut(s)	139
TfiI	GAWTC	4 cut(s)	103, 706, 1961, 2095
TscAI	CASTG	4 cut(s)	172, 229, 1681, 1834
TseFI	GTSAC	2 cut(s)	118, 865
TseI	GCWGC	4 cut(s)	40, 950, 1939, 2021
Tsp45I	GTSAC	2 cut(s)	118, 865
TspDTI	ATGAA	4 cut(s)	195, 824, 842, 977
TspGWI	ACGGA	4 cut(s)	405, 555, 2041, 2138
TspRI	CASTG	4 cut(s)	172, 229, 1681, 1834
VpaK11BI	GGWCC	1 cut(s)	1986
VspI	ATTAAT	3 cut(s)	357, 393, 1653
XapI	RAATTY	6 cut(s)	86, 268, 829, 1089, 1308, 1417
XcmI	CCANNNNNNNNNTGG	1 cut(s)	677
XhoI	CTCGAG	2 cut(s)	1194, 1727
XmnI	GAANNNNTTC	1 cut(s)	161
XspI	CTAG	1 cut(s)	1844
ZrmI	AGTACT	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.