Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0008959

Physical Location & Seq

Genomic Coordinates Forward (+)

77576661 .. 77583731

Gene Structure 7071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG547200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGTCTAGCTTTGTGGGTGTTGTTGTTAACGATACAGAGCTGCAGAGCCAATTCACCCAAGTCGAGCTTCGTACCCTCAAATCAAAATTTCTTTCAACAAAGACTCAGAATGGGCGCGTCACGCTAAAAGATTTGCCGGGTATTTTTGCAAGTCTCAGGTCTTTTAATGAAACGTTCAGAGAAGAGGAGATTAAGACCATCTTGGAGGAGTCAAAAAAGGACACTGGTGAAGAACTTGAATTCGAGTCGTTTCTGCGGGCACATTTGAATTTGCAAGCCCGTGCAGGCGCAAAATCTGGTCGTTTCAAAAAAACTGCTTCATTTCTCAAGGCAACCACTACAAAGGTTGTCCACTCGATCAATGAAAATGAAAAGGCTTCGTATGTCCACCACATTAACAACTACCTGGCAGAAGATTCGTTCTTGAAGAAGTATCTTCCATTAGATCCAGCTACAAATGCTTTATTTGATCTTGCGAAAGATGGAGTACTTCTTTGTAAGCTCATCAACATAGCAGTTCCTGGGACAATAGACGAGCGTGCTATCAACACTAAAGGGGTCCTTAATCCATGGGAGAGAAATGAGAACCATACACTTTGTCTTAATTCAGCAAAAGCTATTGGCTGCACTGTGGTTAACATTGGTACACAGGATTTGGCTGAAGCAAGGCCTCATCTCCTGCTCGGCTTAATTTCTCAAATTATCAAGATTCAACTGTTAGCTGATCTTAATCTGAAGAAAACTCCACAGCTTGTGGAATTGGTGGATGACAGCCAGGAGGTGGAGGAGCTCTTGGGTCTACCGCCAGAGAAGGTTCTACTAAAATGGATGAATTTTCATCTGAAGAAAGCTGGATACGAAAAACAAGTGACAAACTTCTCTTCTGATGTCAAGGATGGAGAGGCTTATGCTTACCTGATTAATGCTCTTGCACCCGAGGTCTCAGGCCCCGCTGCCTTGGATACAAAAGATCCTACACAAAGAGCAACCATGGTTCTTGAGCAAGCTGAGAAATTGGATTGCAAAAGATTTCTCTCTCCTAAAGATATTGTTGAGGGCTCACCAAATCTTAATCTTGCATTTGTTGCACAAATCTTCCAGCACAGGAATGGATTGAGTGCAGATAGTAAAAAAATGTCTTTTGCTGAGATGATGACAGATGATGCAGAAACTTCTCGGGAAGAGAGATGCTTTCGTCTGTGGATTAACAGCCTTGGAACTGCAACCTATGTTAATAATCTTTTTGAAGATGTTAGAAATGGATGGGTTCTTTTGGAAGTGCTTGACAAAATTTCTTCTGGATCAGTCAACTGGAAAAAAGCCTCAAAGCCTCCAATAAAAATGCCATTCAGAAAGGTTGAGAATTGTAACCAAGTTATAGAGATTGGGAAGGAATTAAATTTCTCACTTGTGAATGTAGCTGGTAATGATATTGTGCAAGGAAATAAGAAGCTCATACTGGCTTATTTGTGGCAGTTGATGAGGTTTAGTATGCTTCAACTCCTGAGAAACTTGAGATCACACTCCCATGGTAAAGCTGGTAAAGAGATAACTGATGCTGAAATTCTAAACTGGGCAAACAATAAAGTGAAGAAGTCGGGTAGAACCTCCCAAATGGAGAGTTTCAAGGATAAAAATCTCTCAAGTGGAATTTTCTTCCTCGAGCTTCTTAGTGCTGTGGAGCCAAGGGTGGTCAATTGGAGTCTTGCCACAAAGGGAGAAACTGAGGAAGACAAGAAGGGGAATGCAACATATATAATTAGTGTCGCTCGAAAGCTTGGTTGCTCCATTTTCTTGTTACCTGAGGACATTATGGAGGTAAACCAGAAGATGATCCTTATTTTGACTGCAAGCATCATGTACTGGAGTATGCAGCAAGCAGGAGCAGAATCAGAGTCGGCCACTGACAGTCCCGTGGGTACCCCTACTAAAGCTTCTAAATCTGGTGAGAGCGAAGCAGGTTTGGCTAGGGAAGTCTCGAACTTGTCCATCACTGGCAATACTACTTCCCAACAGACAGGAAATCAATCTTCTCAAGAATCAAAAGACCTCCCAAATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0009653 GO:0009826 GO:0009846 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0022414 GO:0022607 GO:0030029 GO:0030036 GO:0030154 GO:0030312 GO:0032432 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051015 GO:0051017 GO:0051639 GO:0051704 GO:0051764 GO:0060560 GO:0061572 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

687

Amino Acids

76.39

Weight (kDa)

6.61

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	153 - 236	7.2e-14	Calponin homology (CH) domain
CH	PF00307	268 - 369	6.3e-23	Calponin homology (CH) domain
CH	PF00307	394 - 496	6.5e-19	Calponin homology (CH) domain
CH	PF00307	519 - 621	8.4e-19	Calponin homology (CH) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04750 AT5G35700
fragaria_vesca	FvH4_6g41540 FvH4_6g41540
malus_domestica	MD09G1119000.v1.1 MD17G1109900.v1.1
prunus_persica	Prupe.3G205200_v2.0.a1
pyrus_communis	pycom09g04390 pycom17g10220
rosa_chinensis	RchiOBHm_Chr2g0157211
rosa_laevigata	RLG00000020972
rosa_multiflora	Rmu_sc0006282.1_g000007 Rmu_sc0039256.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092410
rosa_rugosa	Rorug02G0458400 Rorug02G0458500
rosa_samantha	Rh2AG523900 Rh2BG538300 Rh2CG508700 Rh2DG547200
rosa_wichuraiana	Rw2G043330 Rw2G043390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1949
Acc65I	GGTACC	1 cut(s)	1919
AccB1I	GGYRCC	1 cut(s)	1919
AccB7I	CCANNNNNTGG	1 cut(s)	781
AccI	GTMKAC	1 cut(s)	799
AccII	CGCG	1 cut(s)	117
AciI	CCGC	3 cut(s)	256, 803, 951
AclI	AACGTT	1 cut(s)	173
AclWI	GGATC	4 cut(s)	440, 965, 1309, 1828
AcoI	YGGCCR	1 cut(s)	1899
AcsI	RAATTY	8 cut(s)	86, 239, 268, 832, 1290, 1399, 1563, 1650
AcuI	CTGAAG	3 cut(s)	681, 755, 863
AfaI	GTAC	5 cut(s)	73, 489, 646, 1862, 1921
AfiI	CCNNNNNNNGG	1 cut(s)	781
AgsI	TTSAA	9 cut(s)	96, 239, 268, 307, 427, 713, 1247, 1499, 1627
AjnI	CCWGG	3 cut(s)	405, 520, 774
AjuI	GAANNNNNNNTTGG	2 cut(s)	51, 83
Alw21I	GWGCWC	1 cut(s)	792
Alw26I	GTCTC	3 cut(s)	158, 946, 1981
AlwI	GGATC	4 cut(s)	440, 965, 1309, 1828
AlwNI	CAGNNNCTG	1 cut(s)	521
Ama87I	CYCGRG	3 cut(s)	935, 1176, 1661
AoxI	GGCC	3 cut(s)	668, 946, 1899
ApeKI	GCWGC	4 cut(s)	40, 624, 953, 1873
ApoI	RAATTY	8 cut(s)	86, 239, 268, 832, 1290, 1399, 1563, 1650
AseI	ATTAAT	1 cut(s)	921
Asp718I	GGTACC	1 cut(s)	1919
AspLEI	GCGC	2 cut(s)	117, 290
AspS9I	GGNCC	2 cut(s)	559, 947
AsuC2I	CCSGG	1 cut(s)	138
AsuHPI	GGTGA	4 cut(s)	46, 239, 1053, 1958
AvaI	CYCGRG	3 cut(s)	935, 1176, 1661
AvaII	GGWCC	1 cut(s)	559
AxyI	CCTNAGG	1 cut(s)	1803
BaeGI	GKGCMC	1 cut(s)	262
BanI	GGYRCC	1 cut(s)	1919
BanII	GRGCYC	2 cut(s)	792, 1061
BbsI	GAAGAC	1 cut(s)	1737
Bbv12I	GWGCWC	1 cut(s)	792
BbvI	GCAGC	4 cut(s)	27, 611, 940, 1885
BccI	CCATC	5 cut(s)	206, 476, 890, 1257, 1997
BcgI	CGANNNNNNTGC	2 cut(s)	399, 433
BciT130I	CCWGG	3 cut(s)	407, 522, 776
BciVI	GTATCC	2 cut(s)	848, 955
BcnI	CCSGG	1 cut(s)	138
BcoDI	GTCTC	3 cut(s)	158, 946, 1981
BfaI	CTAG	2 cut(s)	6, 1968
BfmI	CTRYAG	1 cut(s)	41
BfuAI	ACCTGC	1 cut(s)	1949
BfuI	GTATCC	2 cut(s)	848, 955
BisI	GCNGC	4 cut(s)	41, 625, 954, 1874
BlsI	GCNGC	4 cut(s)	42, 626, 955, 1875
BmcAI	AGTACT	1 cut(s)	489
Bme1390I	CCNGG	4 cut(s)	138, 407, 522, 776
Bme18I	GGWCC	1 cut(s)	559
BmeT110I	CYCGRG	3 cut(s)	935, 1176, 1661
BmgT120I	GGNCC	2 cut(s)	559, 947
BmiI	GGNNCC	4 cut(s)	560, 949, 1683, 1921
BmrFI	CCNGG	4 cut(s)	138, 407, 522, 776
BmrI	ACTGGG	1 cut(s)	1582
BmsI	GCATC	4 cut(s)	1153, 1178, 1546, 1863
BmuI	ACTGGG	1 cut(s)	1582
BpiI	GAAGAC	1 cut(s)	1737
BpmI	CTGGAG	1 cut(s)	1885
BpuEI	CTTGAG	5 cut(s)	311, 1019, 1534, 1627, 2019
BpuMI	CCSGG	1 cut(s)	138
BsaBI	GATNNNNATC	2 cut(s)	729, 1635
BsaI	GGTCTC	1 cut(s)	946
BsaJI	CCNNGG	9 cut(s)	521, 569, 936, 957, 990, 1213, 1528, 1685, 1914
Bsc4I	CCNNNNNNNGG	1 cut(s)	781
Bse1I	ACTGG	6 cut(s)	229, 1316, 1464, 1577, 1868, 1999
Bse21I	CCTNAGG	1 cut(s)	1803
Bse8I	GATNNNNATC	2 cut(s)	729, 1635
BseBI	CCWGG	3 cut(s)	407, 522, 776
BseDI	CCNNGG	9 cut(s)	521, 569, 936, 957, 990, 1213, 1528, 1685, 1914
BseGI	GGATG	4 cut(s)	772, 834, 901, 1268
BseJI	GATNNNNATC	2 cut(s)	729, 1635
BseLI	CCNNNNNNNGG	1 cut(s)	781
BseMII	CTCAG	8 cut(s)	119, 169, 957, 999, 1137, 1496, 1716, 1794
BseNI	ACTGG	6 cut(s)	229, 1316, 1464, 1577, 1868, 1999
BseRI	GAGGAG	3 cut(s)	200, 221, 800
BseSI	GKGCMC	1 cut(s)	262
BseXI	GCAGC	4 cut(s)	27, 611, 940, 1885
BsgI	GTGCAG	3 cut(s)	303, 610, 1140
Bsh1236I	CGCG	1 cut(s)	117
BshFI	GGCC	3 cut(s)	670, 948, 1901
BshNI	GGYRCC	1 cut(s)	1919
BsiHKAI	GWGCWC	1 cut(s)	792
BsiHKCI	CYCGRG	3 cut(s)	935, 1176, 1661
BsiSI	CCGG	1 cut(s)	137
BslFI	GGGAC	2 cut(s)	538, 1896
BslI	CCNNNNNNNGG	1 cut(s)	781
BsmAI	GTCTC	3 cut(s)	158, 946, 1981
BsmFI	GGGAC	2 cut(s)	538, 1896
BsmI	GAATGC	1 cut(s)	1750
BsnI	GGCC	3 cut(s)	670, 948, 1901
Bso31I	GGTCTC	1 cut(s)	946
BsoBI	CYCGRG	3 cut(s)	935, 1176, 1661
Bsp1286I	GDGCHC	3 cut(s)	262, 792, 1061
Bsp143I	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
Bsp19I	CCATGG	3 cut(s)	569, 990, 1528
BspACI	CCGC	3 cut(s)	256, 803, 951
BspANI	GGCC	3 cut(s)	670, 948, 1901
BspCNI	CTCAG	8 cut(s)	118, 168, 956, 1000, 1138, 1497, 1717, 1795
BspFNI	CGCG	1 cut(s)	117
BspLI	GGNNCC	4 cut(s)	560, 949, 1683, 1921
BspMAI	CTGCAG	1 cut(s)	45
BspMI	ACCTGC	1 cut(s)	1949
BspPI	GGATC	4 cut(s)	440, 965, 1309, 1828
BspT107I	GGYRCC	1 cut(s)	1919
BspTNI	GGTCTC	1 cut(s)	946
BsrI	ACTGG	6 cut(s)	229, 1316, 1464, 1577, 1868, 1999
BssECI	CCNNGG	9 cut(s)	521, 569, 936, 957, 990, 1213, 1528, 1685, 1914
BssMI	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
BssT1I	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
Bst2UI	CCWGG	3 cut(s)	407, 522, 776
Bst4CI	ACNGT	3 cut(s)	631, 717, 1910
Bst6I	CTCTTC	3 cut(s)	177, 886, 1176
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstC8I	GCNNGC	7 cut(s)	258, 276, 286, 540, 1005, 1852, 1878
BstDEI	CTNAG	9 cut(s)	105, 155, 943, 1008, 1146, 1505, 1670, 1725, 1803
BstDSI	CCRYGG	4 cut(s)	569, 990, 1528, 1914
BstF5I	GGATG	4 cut(s)	772, 834, 901, 1268
BstFNI	CGCG	1 cut(s)	117
BstHHI	GCGC	2 cut(s)	117, 290
BstKTI	GATC	8 cut(s)	360, 448, 472, 727, 973, 1304, 1520, 1836
BstMAI	GTCTC	3 cut(s)	158, 946, 1981
BstMBI	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
BstMWI	GCNNNNNNNGC	4 cut(s)	121, 458, 1085, 1964
BstNI	CCWGG	3 cut(s)	407, 522, 776
BstSCI	CCNGG	4 cut(s)	136, 405, 520, 774
BstSFI	CTRYAG	1 cut(s)	41
BstSLI	GKGCMC	1 cut(s)	262
BstUI	CGCG	1 cut(s)	117
BstV1I	GCAGC	4 cut(s)	27, 611, 940, 1885
BstV2I	GAAGAC	1 cut(s)	1737
BstX2I	RGATCY	2 cut(s)	445, 970
BstYI	RGATCY	2 cut(s)	445, 970
Bsu36I	CCTNAGG	1 cut(s)	1803
BsuI	GTATCC	2 cut(s)	848, 955
BsuRI	GGCC	3 cut(s)	670, 948, 1901
BtgI	CCRYGG	4 cut(s)	569, 990, 1528, 1914
BtsCI	GGATG	4 cut(s)	772, 834, 901, 1268
BtsIMutI	CAGTG	4 cut(s)	222, 627, 1902, 1992
BveI	ACCTGC	1 cut(s)	1949
Cac8I	GCNNGC	7 cut(s)	258, 276, 286, 540, 1005, 1852, 1878
CaiI	CAGNNNCTG	1 cut(s)	521
CfoI	GCGC	2 cut(s)	117, 290
Cfr13I	GGNCC	2 cut(s)	559, 947
CseI	GACGC	1 cut(s)	106
Csp6I	GTAC	5 cut(s)	72, 488, 645, 1861, 1920
CviAII	CATG	4 cut(s)	570, 991, 1529, 1858
CviQI	GTAC	5 cut(s)	72, 488, 645, 1861, 1920
DdeI	CTNAG	9 cut(s)	105, 155, 943, 1008, 1146, 1505, 1670, 1725, 1803
DpnI	GATC	8 cut(s)	359, 447, 471, 726, 972, 1303, 1519, 1835
DpnII	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
EaeI	YGGCCR	1 cut(s)	1899
Eam1104I	CTCTTC	3 cut(s)	177, 886, 1176
EarI	CTCTTC	3 cut(s)	177, 886, 1176
Ecl136II	GAGCTC	1 cut(s)	790
Eco130I	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
Eco147I	AGGCCT	1 cut(s)	670
Eco24I	GRGCYC	2 cut(s)	792, 1061
Eco31I	GGTCTC	1 cut(s)	946
Eco47I	GGWCC	1 cut(s)	559
Eco53kI	GAGCTC	1 cut(s)	790
Eco57I	CTGAAG	3 cut(s)	681, 755, 863
Eco81I	CCTNAGG	1 cut(s)	1803
Eco88I	CYCGRG	3 cut(s)	935, 1176, 1661
EcoICRI	GAGCTC	1 cut(s)	790
EcoO109I	RGGNCCY	2 cut(s)	559, 947
EcoRI	GAATTC	1 cut(s)	239
EcoRII	CCWGG	3 cut(s)	405, 520, 774
EcoT14I	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
EcoT38I	GRGCYC	2 cut(s)	792, 1061
ErhI	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
FaeI	CATG	4 cut(s)	573, 994, 1532, 1861
FalI	AAGNNNNNCTT	6 cut(s)	51, 83, 185, 217, 546, 578
FaqI	GGGAC	2 cut(s)	538, 1896
FatI	CATG	4 cut(s)	569, 990, 1528, 1857
FauI	CCCGC	2 cut(s)	249, 958
FblI	GTMKAC	1 cut(s)	799
Fnu4HI	GCNGC	4 cut(s)	41, 625, 954, 1874
FokI	GGATG	4 cut(s)	779, 841, 908, 1275
FriOI	GRGCYC	2 cut(s)	792, 1061
Fsp4HI	GCNGC	4 cut(s)	41, 625, 954, 1874
FspBI	CTAG	2 cut(s)	6, 1968
GlaI	GCGC	2 cut(s)	116, 289
GluI	GCNGC	4 cut(s)	41, 625, 954, 1874
GsuI	CTGGAG	1 cut(s)	1885
HaeIII	GGCC	3 cut(s)	670, 948, 1901
HapII	CCGG	1 cut(s)	137
HgaI	GACGC	1 cut(s)	106
HhaI	GCGC	2 cut(s)	117, 290
Hin1II	CATG	4 cut(s)	573, 994, 1532, 1861
Hin6I	GCGC	2 cut(s)	115, 288
HinP1I	GCGC	2 cut(s)	115, 288
HincII	GTYRAC	3 cut(s)	28, 637, 1309
HindII	GTYRAC	3 cut(s)	28, 637, 1309
HindIII	AAGCTT	2 cut(s)	1775, 1932
HinfI	GANTC	9 cut(s)	103, 209, 245, 416, 709, 1702, 1889, 1895, 2039
HpaI	GTTAAC	2 cut(s)	28, 637
HpaII	CCGG	1 cut(s)	137
HphI	GGTGA	4 cut(s)	46, 239, 1053, 1958
Hpy166II	GTNNAC	8 cut(s)	28, 352, 388, 637, 647, 800, 1309, 1822
Hpy188I	TCNGA	7 cut(s)	108, 179, 735, 843, 886, 1352, 1894
Hpy188III	TCNNGA	8 cut(s)	424, 706, 998, 1178, 1299, 1504, 1978, 2036
Hpy8I	GTNNAC	8 cut(s)	28, 352, 388, 637, 647, 800, 1309, 1822
HpyAV	CCTTC	3 cut(s)	805, 1384, 1732
HpyCH4III	ACNGT	3 cut(s)	631, 717, 1910
HpyCH4IV	ACGT	1 cut(s)	173
HpyF10VI	GCNNNNNNNGC	4 cut(s)	121, 458, 1085, 1964
HpyF3I	CTNAG	9 cut(s)	105, 155, 943, 1008, 1146, 1505, 1670, 1725, 1803
HpySE526I	ACGT	1 cut(s)	173
Hsp92II	CATG	4 cut(s)	573, 994, 1532, 1861
HspAI	GCGC	2 cut(s)	115, 288
KpnI	GGTACC	1 cut(s)	1923
KspAI	GTTAAC	2 cut(s)	28, 637
Kzo9I	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
LmnI	GCTCC	4 cut(s)	787, 1681, 1790, 1883
Lsp1109I	GCAGC	4 cut(s)	27, 611, 940, 1885
LweI	GCATC	4 cut(s)	1153, 1178, 1546, 1863
MaeI	CTAG	2 cut(s)	6, 1968
MaeII	ACGT	1 cut(s)	173
MaeIII	GTNAC	4 cut(s)	118, 868, 1367, 1797
MalI	GATC	8 cut(s)	359, 447, 471, 726, 972, 1303, 1519, 1835
MboI	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
MfeI	CAATTG	1 cut(s)	1696
MflI	RGATCY	2 cut(s)	445, 970
MhlI	GDGCHC	3 cut(s)	262, 792, 1061
MlyI	GAGTC	5 cut(s)	97, 218, 254, 1711, 1904
MslI	CAYNNNNRTG	2 cut(s)	1107, 1527
MspA1I	CMGCKG	1 cut(s)	953
MspI	CCGG	1 cut(s)	137
MspR9I	CCNGG	4 cut(s)	138, 407, 522, 776
MunI	CAATTG	1 cut(s)	1696
Mva1269I	GAATGC	1 cut(s)	1750
MvaI	CCWGG	3 cut(s)	407, 522, 776
MvnI	CGCG	1 cut(s)	117
MwoI	GCNNNNNNNGC	4 cut(s)	121, 458, 1085, 1964
NciI	CCSGG	1 cut(s)	138
NcoI	CCATGG	3 cut(s)	569, 990, 1528
NdeII	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
NlaIII	CATG	4 cut(s)	573, 994, 1532, 1861
NlaIV	GGNNCC	4 cut(s)	560, 949, 1683, 1921
NmeAIII	GCCGAG	1 cut(s)	663
NmuCI	GTSAC	2 cut(s)	118, 868
PaeR7I	CTCGAG	1 cut(s)	1661
PceI	AGGCCT	1 cut(s)	670
PctI	GAATGC	1 cut(s)	1750
PfeI	GAWTC	4 cut(s)	416, 709, 1889, 2039
PflMI	CCANNNNNTGG	1 cut(s)	781
PkrI	GCNGC	4 cut(s)	42, 626, 955, 1875
PleI	GAGTC	5 cut(s)	97, 217, 253, 1710, 1903
PpsI	GAGTC	5 cut(s)	97, 217, 253, 1710, 1903
PpuMI	RGGWCCY	1 cut(s)	559
PshBI	ATTAAT	1 cut(s)	921
Psp124BI	GAGCTC	1 cut(s)	792
Psp1406I	AACGTT	1 cut(s)	173
Psp5II	RGGWCCY	1 cut(s)	559
Psp6I	CCWGG	3 cut(s)	405, 520, 774
PspGI	CCWGG	3 cut(s)	405, 520, 774
PspN4I	GGNNCC	4 cut(s)	560, 949, 1683, 1921
PspPI	GGNCC	2 cut(s)	559, 947
PspPPI	RGGWCCY	1 cut(s)	559
PspXI	VCTCGAGB	1 cut(s)	1661
PstI	CTGCAG	1 cut(s)	45
PstNI	CAGNNNCTG	1 cut(s)	521
PsuI	RGATCY	2 cut(s)	445, 970
RsaI	GTAC	5 cut(s)	73, 489, 646, 1862, 1921
RsaNI	GTAC	5 cut(s)	72, 488, 645, 1861, 1920
RseI	CAYNNNNRTG	2 cut(s)	1107, 1527
SacI	GAGCTC	1 cut(s)	792
SatI	GCNGC	4 cut(s)	41, 625, 954, 1874
Sau3AI	GATC	8 cut(s)	357, 445, 469, 724, 970, 1301, 1517, 1833
Sau96I	GGNCC	2 cut(s)	559, 947
ScaI	AGTACT	1 cut(s)	489
SchI	GAGTC	5 cut(s)	97, 218, 254, 1711, 1904
ScrFI	CCNGG	4 cut(s)	138, 407, 522, 776
SduI	GDGCHC	3 cut(s)	262, 792, 1061
SfaNI	GCATC	4 cut(s)	1153, 1178, 1546, 1863
SfcI	CTRYAG	1 cut(s)	41
Sfr274I	CTCGAG	1 cut(s)	1661
SinI	GGWCC	1 cut(s)	559
SlaI	CTCGAG	1 cut(s)	1661
SmiMI	CAYNNNNRTG	2 cut(s)	1107, 1527
SmlI	CTYRAG	6 cut(s)	326, 998, 1513, 1642, 1661, 2034
SmoI	CTYRAG	6 cut(s)	326, 998, 1513, 1642, 1661, 2034
SseBI	AGGCCT	1 cut(s)	670
SsiI	CCGC	3 cut(s)	256, 803, 951
SspMI	CTAG	2 cut(s)	6, 1968
SstI	GAGCTC	1 cut(s)	792
StuI	AGGCCT	1 cut(s)	670
StyD4I	CCNGG	4 cut(s)	136, 405, 520, 774
StyI	CCWWGG	6 cut(s)	569, 957, 990, 1213, 1528, 1685
TaaI	ACNGT	3 cut(s)	631, 717, 1910
TaiI	ACGT	1 cut(s)	176
TaqI	TCGA	6 cut(s)	63, 243, 356, 1662, 1771, 1979
TatI	WGTACW	2 cut(s)	487, 1860
TfiI	GAWTC	4 cut(s)	416, 709, 1889, 2039
TscAI	CASTG	4 cut(s)	229, 634, 1909, 1999
TseFI	GTSAC	2 cut(s)	118, 868
TseI	GCWGC	4 cut(s)	40, 624, 953, 1873
Tsp45I	GTSAC	2 cut(s)	118, 868
TspDTI	ATGAA	6 cut(s)	183, 309, 378, 384, 827, 845
TspRI	CASTG	4 cut(s)	229, 634, 1909, 1999
Van91I	CCANNNNNTGG	1 cut(s)	781
VpaK11BI	GGWCC	1 cut(s)	559
VspI	ATTAAT	1 cut(s)	921
XapI	RAATTY	8 cut(s)	86, 239, 268, 832, 1290, 1399, 1563, 1650
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1106, 1535
XhoI	CTCGAG	1 cut(s)	1661
XmiI	GTMKAC	1 cut(s)	799
XspI	CTAG	2 cut(s)	6, 1968
ZrmI	AGTACT	1 cut(s)	489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.