EGF-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42620 AT5G42620 |
| fragaria_vesca | FvH4_2g40290 FvH4_2g40290 FvH4_2g40290 |
| malus_domestica | MD08G1036300.v1.1 |
| prunus_persica | Prupe.1G383600_v2.0.a1 |
| pyrus_communis | pycom08g02900 pycom15g02830 |
| rosa_chinensis | RchiOBHm_Chr6g0300451 |
| rosa_laevigata | RLG00000011336 |
| rosa_multiflora | Rmu_sc0001670.1_g000004 Rmu_sc0014364.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00167770 |
| rosa_rugosa | Rorug06G0296200 |
| rosa_samantha | Rh6AG408800 Rh6BG416000 Rh6CG423500 Rh6DG409200 |
| rosa_wichuraiana | Rw6G035770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 1005 |
| AciI | CCGC | 4 cut(s) | 829, 908, 1446, 2238 |
| AclWI | GGATC | 3 cut(s) | 899, 1165, 2311 |
| AcoI | YGGCCR | 1 cut(s) | 1447 |
| AcsI | RAATTY | 2 cut(s) | 622, 1694 |
| AcuI | CTGAAG | 3 cut(s) | 825, 1389, 2168 |
| AcvI | CACGTG | 1 cut(s) | 1526 |
| AfaI | GTAC | 8 cut(s) | 442, 1351, 1474, 1507, 1597, 1780, 1797, 2461 |
| AfeI | AGCGCT | 1 cut(s) | 1200 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 24, 491, 559, 617, 746, 762, 763, 1442, 1709 |
| AflIII | ACRYGT | 4 cut(s) | 1003, 1302, 2078, 2142 |
| AgsI | TTSAA | 5 cut(s) | 272, 358, 438, 608, 1185 |
| AhlI | ACTAGT | 1 cut(s) | 2098 |
| AjiI | CACGTC | 2 cut(s) | 797, 1100 |
| AjnI | CCWGG | 3 cut(s) | 59, 1269, 1568 |
| AleI | CACNNNNGTG | 1 cut(s) | 175 |
| Alw21I | GWGCWC | 3 cut(s) | 1525, 1531, 2164 |
| Alw26I | GTCTC | 5 cut(s) | 205, 1123, 1256, 1865, 2334 |
| Alw44I | GTGCAC | 2 cut(s) | 1521, 1527 |
| AlwI | GGATC | 3 cut(s) | 899, 1165, 2311 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 848, 1218 |
| Ama87I | CYCGRG | 1 cut(s) | 1069 |
| Aor51HI | AGCGCT | 1 cut(s) | 1200 |
| AoxI | GGCC | 4 cut(s) | 988, 1416, 1447, 1578 |
| ApaI | GGGCCC | 1 cut(s) | 1420 |
| ApaLI | GTGCAC | 2 cut(s) | 1521, 1527 |
| ApeKI | GCWGC | 4 cut(s) | 670, 2010, 2188, 2288 |
| ApoI | RAATTY | 2 cut(s) | 622, 1694 |
| AseI | ATTAAT | 1 cut(s) | 1748 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1894 |
| AspLEI | GCGC | 1 cut(s) | 1201 |
| AspS9I | GGNCC | 4 cut(s) | 988, 1416, 1417, 1715 |
| AsuC2I | CCSGG | 3 cut(s) | 216, 1731, 2235 |
| AsuHPI | GGTGA | 5 cut(s) | 437, 506, 739, 1754, 2459 |
| AvaI | CYCGRG | 1 cut(s) | 1069 |
| AvaII | GGWCC | 1 cut(s) | 1715 |
| AxyI | CCTNAGG | 1 cut(s) | 243 |
| BaeGI | GKGCMC | 3 cut(s) | 1420, 1525, 1531 |
| BanII | GRGCYC | 2 cut(s) | 1420, 2245 |
| BauI | CACGAG | 3 cut(s) | 175, 678, 878 |
| BbrPI | CACGTG | 1 cut(s) | 1526 |
| BbsI | GAAGAC | 2 cut(s) | 952, 1446 |
| Bbv12I | GWGCWC | 3 cut(s) | 1525, 1531, 2164 |
| BbvI | GCAGC | 4 cut(s) | 682, 2022, 2200, 2300 |
| BccI | CCATC | 5 cut(s) | 653, 1082, 1490, 1838, 2330 |
| BceAI | ACGGC | 2 cut(s) | 1052, 2451 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 659, 693 |
| BciT130I | CCWGG | 3 cut(s) | 61, 1271, 1570 |
| BciVI | GTATCC | 1 cut(s) | 632 |
| BclI | TGATCA | 2 cut(s) | 187, 784 |
| BcnI | CCSGG | 3 cut(s) | 216, 1731, 2235 |
| BcoDI | GTCTC | 5 cut(s) | 205, 1123, 1256, 1865, 2334 |
| BcuI | ACTAGT | 1 cut(s) | 2098 |
| BfaI | CTAG | 5 cut(s) | 108, 1196, 2099, 2175, 2300 |
| BfmI | CTRYAG | 4 cut(s) | 576, 768, 1774, 1885 |
| BfoI | RGCGCY | 1 cut(s) | 1202 |
| BfuI | GTATCC | 1 cut(s) | 632 |
| BisI | GCNGC | 5 cut(s) | 671, 1447, 2011, 2189, 2289 |
| BlsI | GCNGC | 5 cut(s) | 672, 1448, 2012, 2190, 2290 |
| BmcAI | AGTACT | 1 cut(s) | 442 |
| Bme1390I | CCNGG | 6 cut(s) | 61, 216, 1271, 1570, 1731, 2235 |
| Bme18I | GGWCC | 1 cut(s) | 1715 |
| BmeT110I | CYCGRG | 1 cut(s) | 1069 |
| BmgBI | CACGTC | 2 cut(s) | 797, 1100 |
| BmgT120I | GGNCC | 4 cut(s) | 988, 1416, 1417, 1715 |
| BmiI | GGNNCC | 4 cut(s) | 1114, 1268, 1418, 1615 |
| BmrFI | CCNGG | 6 cut(s) | 61, 216, 1271, 1570, 1731, 2235 |
| BmrI | ACTGGG | 2 cut(s) | 1129, 1608 |
| BmsI | GCATC | 6 cut(s) | 88, 121, 355, 556, 1048, 2440 |
| BmuI | ACTGGG | 2 cut(s) | 1129, 1608 |
| BpiI | GAAGAC | 2 cut(s) | 952, 1446 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1459 |
| BpuEI | CTTGAG | 3 cut(s) | 1103, 1689, 2213 |
| BpuMI | CCSGG | 3 cut(s) | 216, 1731, 2235 |
| Bsa29I | ATCGAT | 2 cut(s) | 2315, 2334 |
| BsaAI | YACGTR | 1 cut(s) | 1526 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2315 |
| BsaI | GGTCTC | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 7 cut(s) | 60, 260, 895, 1016, 1270, 1864, 2486 |
| BsaWI | WCCGGW | 1 cut(s) | 484 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 466, 496, 1824, 1854 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 24, 491, 559, 617, 746, 762, 763, 1442, 1709 |
| Bse118I | RCCGGY | 1 cut(s) | 990 |
| Bse1I | ACTGG | 6 cut(s) | 751, 1124, 1159, 1450, 1603, 1975 |
| Bse21I | CCTNAGG | 1 cut(s) | 243 |
| Bse3DI | GCAATG | 1 cut(s) | 1921 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2315 |
| BseBI | CCWGG | 3 cut(s) | 61, 1271, 1570 |
| BseCI | ATCGAT | 2 cut(s) | 2315, 2334 |
| BseDI | CCNNGG | 7 cut(s) | 60, 260, 895, 1016, 1270, 1864, 2486 |
| BseGI | GGATG | 4 cut(s) | 334, 982, 1093, 1781 |
| BseJI | GATNNNNATC | 1 cut(s) | 2315 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 24, 491, 559, 617, 746, 762, 763, 1442, 1709 |
| BseMI | GCAATG | 1 cut(s) | 1921 |
| BseMII | CTCAG | 6 cut(s) | 257, 945, 954, 1292, 1952, 2427 |
| BseNI | ACTGG | 6 cut(s) | 751, 1124, 1159, 1450, 1603, 1975 |
| BseRI | GAGGAG | 6 cut(s) | 231, 335, 707, 1107, 2037, 2210 |
| BseSI | GKGCMC | 3 cut(s) | 1420, 1525, 1531 |
| BseXI | GCAGC | 4 cut(s) | 682, 2022, 2200, 2300 |
| BseYI | CCCAGC | 2 cut(s) | 806, 985 |
| BsgI | GTGCAG | 2 cut(s) | 496, 689 |
| Bsh1236I | CGCG | 1 cut(s) | 1005 |
| BshFI | GGCC | 4 cut(s) | 990, 1418, 1449, 1580 |
| BshVI | ATCGAT | 2 cut(s) | 2315, 2334 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1525, 1531, 2164 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1069 |
| BsiSI | CCGG | 6 cut(s) | 215, 485, 991, 1731, 1757, 2234 |
| BslFI | GGGAC | 3 cut(s) | 807, 865, 1288 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 24, 491, 559, 617, 746, 762, 763, 1442, 1709 |
| BsmAI | GTCTC | 5 cut(s) | 205, 1123, 1256, 1865, 2334 |
| BsmBI | CGTCTC | 2 cut(s) | 1256, 2334 |
| BsmFI | GGGAC | 3 cut(s) | 807, 865, 1288 |
| BsmI | GAATGC | 2 cut(s) | 1030, 2178 |
| BsnI | GGCC | 4 cut(s) | 990, 1418, 1449, 1580 |
| Bso31I | GGTCTC | 1 cut(s) | 205 |
| BsoBI | CYCGRG | 1 cut(s) | 1069 |
| Bsp120I | GGGCCC | 1 cut(s) | 1416 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1420, 1525, 1531, 2164, 2245 |
| Bsp1407I | TGTACA | 2 cut(s) | 1349, 1472 |
| Bsp143I | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| Bsp19I | CCATGG | 1 cut(s) | 2486 |
| BspACI | CCGC | 4 cut(s) | 829, 908, 1446, 2238 |
| BspANI | GGCC | 4 cut(s) | 990, 1418, 1449, 1580 |
| BspCNI | CTCAG | 6 cut(s) | 256, 946, 955, 1291, 1951, 2426 |
| BspDI | ATCGAT | 2 cut(s) | 2315, 2334 |
| BspFNI | CGCG | 1 cut(s) | 1005 |
| BspHI | TCATGA | 4 cut(s) | 184, 253, 1137, 1879 |
| BspLI | GGNNCC | 4 cut(s) | 1114, 1268, 1418, 1615 |
| BspMAI | CTGCAG | 2 cut(s) | 580, 1778 |
| BspPI | GGATC | 3 cut(s) | 899, 1165, 2311 |
| BspQI | GCTCTTC | 1 cut(s) | 586 |
| BspTNI | GGTCTC | 1 cut(s) | 205 |
| BsrDI | GCAATG | 1 cut(s) | 1921 |
| BsrFI | RCCGGY | 1 cut(s) | 990 |
| BsrGI | TGTACA | 2 cut(s) | 1349, 1472 |
| BsrI | ACTGG | 6 cut(s) | 751, 1124, 1159, 1450, 1603, 1975 |
| BssAI | RCCGGY | 1 cut(s) | 990 |
| BssECI | CCNNGG | 7 cut(s) | 60, 260, 895, 1016, 1270, 1864, 2486 |
| BssMI | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| BssSI | CACGAG | 3 cut(s) | 175, 678, 878 |
| BssT1I | CCWWGG | 5 cut(s) | 260, 895, 1016, 1864, 2486 |
| Bst2BI | CACGAG | 3 cut(s) | 175, 678, 878 |
| Bst2UI | CCWGG | 3 cut(s) | 61, 1271, 1570 |
| Bst4CI | ACNGT | 8 cut(s) | 630, 1214, 1250, 1877, 1886, 1895, 1982, 2273 |
| Bst6I | CTCTTC | 2 cut(s) | 203, 586 |
| BstAUI | TGTACA | 2 cut(s) | 1349, 1472 |
| BstBAI | YACGTR | 1 cut(s) | 1526 |
| BstC8I | GCNNGC | 2 cut(s) | 912, 2071 |
| BstDSI | CCRYGG | 1 cut(s) | 2486 |
| BstEII | GGTNACC | 1 cut(s) | 727 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 22, 557, 615, 1440 |
| BstF5I | GGATG | 4 cut(s) | 334, 982, 1093, 1781 |
| BstFNI | CGCG | 1 cut(s) | 1005 |
| BstH2I | RGCGCY | 1 cut(s) | 1202 |
| BstHHI | GCGC | 1 cut(s) | 1201 |
| BstKTI | GATC | 8 cut(s) | 190, 787, 907, 1160, 1175, 2319, 2419, 2483 |
| BstMAI | GTCTC | 5 cut(s) | 205, 1123, 1256, 1865, 2334 |
| BstMBI | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 98, 458, 1036, 2396 |
| BstNI | CCWGG | 3 cut(s) | 61, 1271, 1570 |
| BstNSI | RCATGY | 7 cut(s) | 815, 893, 914, 1306, 2082, 2146, 2373 |
| BstPI | GGTNACC | 1 cut(s) | 727 |
| BstSCI | CCNGG | 6 cut(s) | 59, 214, 1269, 1568, 1729, 2233 |
| BstSFI | CTRYAG | 4 cut(s) | 576, 768, 1774, 1885 |
| BstSLI | GKGCMC | 3 cut(s) | 1420, 1525, 1531 |
| BstUI | CGCG | 1 cut(s) | 1005 |
| BstV1I | GCAGC | 4 cut(s) | 682, 2022, 2200, 2300 |
| BstV2I | GAAGAC | 2 cut(s) | 952, 1446 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1576 |
| Bsu15I | ATCGAT | 2 cut(s) | 2315, 2334 |
| Bsu36I | CCTNAGG | 1 cut(s) | 243 |
| BsuI | GTATCC | 1 cut(s) | 632 |
| BsuRI | GGCC | 4 cut(s) | 990, 1418, 1449, 1580 |
| BsuTUI | ATCGAT | 2 cut(s) | 2315, 2334 |
| BtgI | CCRYGG | 1 cut(s) | 2486 |
| BtgZI | GCGATG | 2 cut(s) | 533, 2013 |
| BtrI | CACGTC | 2 cut(s) | 797, 1100 |
| BtsCI | GGATG | 4 cut(s) | 334, 982, 1093, 1781 |
| BtsI | GCAGTG | 2 cut(s) | 147, 1986 |
| BtsIMutI | CAGTG | 9 cut(s) | 147, 794, 951, 960, 1117, 1167, 1219, 1811, 1986 |
| Cac8I | GCNNGC | 2 cut(s) | 912, 2071 |
| CaiI | CAGNNNCTG | 2 cut(s) | 848, 1218 |
| CciI | TCATGA | 4 cut(s) | 184, 253, 1137, 1879 |
| CfoI | GCGC | 1 cut(s) | 1201 |
| Cfr10I | RCCGGY | 1 cut(s) | 990 |
| Cfr13I | GGNCC | 4 cut(s) | 988, 1416, 1417, 1715 |
| ClaI | ATCGAT | 2 cut(s) | 2315, 2334 |
| CseI | GACGC | 2 cut(s) | 81, 957 |
| Csp6I | GTAC | 8 cut(s) | 441, 1350, 1473, 1506, 1596, 1779, 1796, 2460 |
| CviQI | GTAC | 8 cut(s) | 441, 1350, 1473, 1506, 1596, 1779, 1796, 2460 |
| DpnI | GATC | 8 cut(s) | 189, 786, 906, 1159, 1174, 2318, 2418, 2482 |
| DpnII | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| EaeI | YGGCCR | 1 cut(s) | 1447 |
| Eam1104I | CTCTTC | 2 cut(s) | 203, 586 |
| EarI | CTCTTC | 2 cut(s) | 203, 586 |
| Eco130I | CCWWGG | 5 cut(s) | 260, 895, 1016, 1864, 2486 |
| Eco24I | GRGCYC | 2 cut(s) | 1420, 2245 |
| Eco31I | GGTCTC | 1 cut(s) | 205 |
| Eco32I | GATATC | 3 cut(s) | 1513, 2313, 2332 |
| Eco47I | GGWCC | 1 cut(s) | 1715 |
| Eco47III | AGCGCT | 1 cut(s) | 1200 |
| Eco57I | CTGAAG | 3 cut(s) | 825, 1389, 2168 |
| Eco72I | CACGTG | 1 cut(s) | 1526 |
| Eco81I | CCTNAGG | 1 cut(s) | 243 |
| Eco88I | CYCGRG | 1 cut(s) | 1069 |
| Eco91I | GGTNACC | 1 cut(s) | 727 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 22, 557, 615, 1440 |
| EcoO65I | GGTNACC | 1 cut(s) | 727 |
| EcoRII | CCWGG | 3 cut(s) | 59, 1269, 1568 |
| EcoRV | GATATC | 3 cut(s) | 1513, 2313, 2332 |
| EcoT14I | CCWWGG | 5 cut(s) | 260, 895, 1016, 1864, 2486 |
| EcoT22I | ATGCAT | 3 cut(s) | 891, 1032, 1952 |
| EcoT38I | GRGCYC | 2 cut(s) | 1420, 2245 |
| ErhI | CCWWGG | 5 cut(s) | 260, 895, 1016, 1864, 2486 |
| Esp3I | CGTCTC | 2 cut(s) | 1256, 2334 |
| FaqI | GGGAC | 3 cut(s) | 807, 865, 1288 |
| FauI | CCCGC | 2 cut(s) | 836, 2231 |
| FauNDI | CATATG | 1 cut(s) | 1952 |
| FbaI | TGATCA | 2 cut(s) | 187, 784 |
| Fnu4HI | GCNGC | 5 cut(s) | 671, 1447, 2011, 2189, 2289 |
| FokI | GGATG | 4 cut(s) | 341, 989, 1100, 1768 |
| FriOI | GRGCYC | 2 cut(s) | 1420, 2245 |
| Fsp4HI | GCNGC | 5 cut(s) | 671, 1447, 2011, 2189, 2289 |
| FspBI | CTAG | 5 cut(s) | 108, 1196, 2099, 2175, 2300 |
| GlaI | GCGC | 1 cut(s) | 1200 |
| GluI | GCNGC | 5 cut(s) | 671, 1447, 2011, 2189, 2289 |
| GsaI | CCCAGC | 2 cut(s) | 810, 989 |
| HaeII | RGCGCY | 1 cut(s) | 1202 |
| HaeIII | GGCC | 4 cut(s) | 990, 1418, 1449, 1580 |
| HapII | CCGG | 6 cut(s) | 215, 485, 991, 1731, 1757, 2234 |
| HgaI | GACGC | 2 cut(s) | 81, 957 |
| HhaI | GCGC | 1 cut(s) | 1201 |
| Hin6I | GCGC | 1 cut(s) | 1199 |
| HinP1I | GCGC | 1 cut(s) | 1199 |
| HincII | GTYRAC | 1 cut(s) | 398 |
| HindII | GTYRAC | 1 cut(s) | 398 |
| HindIII | AAGCTT | 1 cut(s) | 276 |
| HinfI | GANTC | 7 cut(s) | 48, 73, 845, 1192, 1276, 1565, 1974 |
| HpaII | CCGG | 6 cut(s) | 215, 485, 991, 1731, 1757, 2234 |
| HphI | GGTGA | 5 cut(s) | 437, 506, 739, 1754, 2459 |
| Hpy166II | GTNNAC | 6 cut(s) | 398, 779, 1165, 1523, 1529, 1715 |
| Hpy188III | TCNNGA | 9 cut(s) | 185, 254, 680, 878, 1071, 1138, 1253, 1880, 2320 |
| Hpy8I | GTNNAC | 6 cut(s) | 398, 779, 1165, 1523, 1529, 1715 |
| HpyAV | CCTTC | 6 cut(s) | 140, 288, 319, 444, 1364, 2438 |
| HpyCH4III | ACNGT | 8 cut(s) | 630, 1214, 1250, 1877, 1886, 1895, 1982, 2273 |
| HpyCH4IV | ACGT | 4 cut(s) | 781, 796, 1099, 1525 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 98, 458, 1036, 2396 |
| HpySE526I | ACGT | 4 cut(s) | 781, 796, 1099, 1525 |
| HspAI | GCGC | 1 cut(s) | 1199 |
| Ksp22I | TGATCA | 2 cut(s) | 187, 784 |
| Kzo9I | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| LguI | GCTCTTC | 1 cut(s) | 586 |
| LmnI | GCTCC | 4 cut(s) | 89, 829, 1049, 2167 |
| Lsp1109I | GCAGC | 4 cut(s) | 682, 2022, 2200, 2300 |
| LweI | GCATC | 6 cut(s) | 88, 121, 355, 556, 1048, 2440 |
| MaeI | CTAG | 5 cut(s) | 108, 1196, 2099, 2175, 2300 |
| MaeII | ACGT | 4 cut(s) | 781, 796, 1099, 1525 |
| MalI | GATC | 8 cut(s) | 189, 786, 906, 1159, 1174, 2318, 2418, 2482 |
| MboI | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| MboII | GAAGA | 6 cut(s) | 220, 603, 957, 1446, 2174, 2453 |
| MfeI | CAATTG | 1 cut(s) | 801 |
| MhlI | GDGCHC | 5 cut(s) | 1420, 1525, 1531, 2164, 2245 |
| MluI | ACGCGT | 1 cut(s) | 1003 |
| MlyI | GAGTC | 2 cut(s) | 1186, 1270 |
| MmeI | TCCRAC | 4 cut(s) | 200, 1244, 1647, 2288 |
| Mph1103I | ATGCAT | 3 cut(s) | 891, 1032, 1952 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1894 |
| MseI | TTAA | 6 cut(s) | 632, 1737, 1748, 1827, 2256, 2524 |
| MslI | CAYNNNNRTG | 5 cut(s) | 175, 288, 816, 1294, 1878 |
| MspI | CCGG | 6 cut(s) | 215, 485, 991, 1731, 1757, 2234 |
| MspR9I | CCNGG | 6 cut(s) | 61, 216, 1271, 1570, 1731, 2235 |
| MunI | CAATTG | 1 cut(s) | 801 |
| Mva1269I | GAATGC | 2 cut(s) | 1030, 2178 |
| MvaI | CCWGG | 3 cut(s) | 61, 1271, 1570 |
| MvnI | CGCG | 1 cut(s) | 1005 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 98, 458, 1036, 2396 |
| NciI | CCSGG | 3 cut(s) | 216, 1731, 2235 |
| NcoI | CCATGG | 1 cut(s) | 2486 |
| NdeI | CATATG | 1 cut(s) | 1952 |
| NdeII | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| NlaIV | GGNNCC | 4 cut(s) | 1114, 1268, 1418, 1615 |
| NmuCI | GTSAC | 3 cut(s) | 727, 958, 1285 |
| NsiI | ATGCAT | 3 cut(s) | 891, 1032, 1952 |
| NspI | RCATGY | 7 cut(s) | 815, 893, 914, 1306, 2082, 2146, 2373 |
| OliI | CACNNNNGTG | 1 cut(s) | 175 |
| PaeI | GCATGC | 1 cut(s) | 914 |
| PagI | TCATGA | 4 cut(s) | 184, 253, 1137, 1879 |
| PciI | ACATGT | 3 cut(s) | 1302, 2078, 2142 |
| PciSI | GCTCTTC | 1 cut(s) | 586 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2340 |
| PctI | GAATGC | 2 cut(s) | 1030, 2178 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1894 |
| PfeI | GAWTC | 5 cut(s) | 48, 73, 845, 1565, 1974 |
| PflFI | GACNNNGTC | 1 cut(s) | 216 |
| PkrI | GCNGC | 5 cut(s) | 672, 1448, 2012, 2190, 2290 |
| PleI | GAGTC | 2 cut(s) | 1186, 1270 |
| PmaCI | CACGTG | 1 cut(s) | 1526 |
| PmlI | CACGTG | 1 cut(s) | 1526 |
| PpsI | GAGTC | 2 cut(s) | 1186, 1270 |
| Ppu21I | YACGTR | 1 cut(s) | 1526 |
| PscI | ACATGT | 3 cut(s) | 1302, 2078, 2142 |
| PshBI | ATTAAT | 1 cut(s) | 1748 |
| Psp6I | CCWGG | 3 cut(s) | 59, 1269, 1568 |
| PspCI | CACGTG | 1 cut(s) | 1526 |
| PspEI | GGTNACC | 1 cut(s) | 727 |
| PspFI | CCCAGC | 2 cut(s) | 806, 985 |
| PspGI | CCWGG | 3 cut(s) | 59, 1269, 1568 |
| PspN4I | GGNNCC | 4 cut(s) | 1114, 1268, 1418, 1615 |
| PspOMI | GGGCCC | 1 cut(s) | 1416 |
| PspPI | GGNCC | 4 cut(s) | 988, 1416, 1417, 1715 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1879, 1911 |
| PstI | CTGCAG | 2 cut(s) | 580, 1778 |
| PstNI | CAGNNNCTG | 2 cut(s) | 848, 1218 |
| PsyI | GACNNNGTC | 1 cut(s) | 216 |
| RsaI | GTAC | 8 cut(s) | 442, 1351, 1474, 1507, 1597, 1780, 1797, 2461 |
| RsaNI | GTAC | 8 cut(s) | 441, 1350, 1473, 1506, 1596, 1779, 1796, 2460 |
| RseI | CAYNNNNRTG | 5 cut(s) | 175, 288, 816, 1294, 1878 |
| SapI | GCTCTTC | 1 cut(s) | 586 |
| SaqAI | TTAA | 6 cut(s) | 632, 1737, 1748, 1827, 2256, 2524 |
| SatI | GCNGC | 5 cut(s) | 671, 1447, 2011, 2189, 2289 |
| Sau3AI | GATC | 8 cut(s) | 187, 784, 904, 1157, 1172, 2316, 2416, 2480 |
| Sau96I | GGNCC | 4 cut(s) | 988, 1416, 1417, 1715 |
| ScaI | AGTACT | 1 cut(s) | 442 |
| SchI | GAGTC | 2 cut(s) | 1186, 1270 |
| ScrFI | CCNGG | 6 cut(s) | 61, 216, 1271, 1570, 1731, 2235 |
| SduI | GDGCHC | 5 cut(s) | 1420, 1525, 1531, 2164, 2245 |
| SfaNI | GCATC | 6 cut(s) | 88, 121, 355, 556, 1048, 2440 |
| SfcI | CTRYAG | 4 cut(s) | 576, 768, 1774, 1885 |
| SinI | GGWCC | 1 cut(s) | 1715 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 175, 288, 816, 1294, 1878 |
| SmlI | CTYRAG | 3 cut(s) | 1082, 1704, 2192 |
| SmoI | CTYRAG | 3 cut(s) | 1082, 1704, 2192 |
| SpeI | ACTAGT | 1 cut(s) | 2098 |
| SphI | GCATGC | 1 cut(s) | 914 |
| SsiI | CCGC | 4 cut(s) | 829, 908, 1446, 2238 |
| SspI | AATATT | 1 cut(s) | 412 |
| SspMI | CTAG | 5 cut(s) | 108, 1196, 2099, 2175, 2300 |
| StyD4I | CCNGG | 6 cut(s) | 59, 214, 1269, 1568, 1729, 2233 |
| StyI | CCWWGG | 5 cut(s) | 260, 895, 1016, 1864, 2486 |
| TaaI | ACNGT | 8 cut(s) | 630, 1214, 1250, 1877, 1886, 1895, 1982, 2273 |
| TaiI | ACGT | 4 cut(s) | 784, 799, 1102, 1528 |
| TaqI | TCGA | 5 cut(s) | 1254, 1723, 1977, 2315, 2334 |
| TaqII | GACCGA | 1 cut(s) | 402 |
| TatI | WGTACW | 5 cut(s) | 440, 1349, 1472, 1778, 1795 |
| TauI | GCSGC | 1 cut(s) | 1449 |
| TfiI | GAWTC | 5 cut(s) | 48, 73, 845, 1565, 1974 |
| Tru1I | TTAA | 6 cut(s) | 632, 1737, 1748, 1827, 2256, 2524 |
| Tru9I | TTAA | 6 cut(s) | 632, 1737, 1748, 1827, 2256, 2524 |
| TscAI | CASTG | 9 cut(s) | 147, 794, 958, 967, 1124, 1167, 1219, 1811, 1993 |
| TseFI | GTSAC | 3 cut(s) | 727, 958, 1285 |
| TseI | GCWGC | 4 cut(s) | 670, 2010, 2188, 2288 |
| Tsp45I | GTSAC | 3 cut(s) | 727, 958, 1285 |
| TspDTI | ATGAA | 9 cut(s) | 173, 272, 948, 993, 1154, 1782, 1887, 2016, 2298 |
| TspGWI | ACGGA | 5 cut(s) | 1062, 1413, 1523, 1774, 2042 |
| TspRI | CASTG | 9 cut(s) | 147, 794, 958, 967, 1124, 1167, 1219, 1811, 1993 |
| Tth111I | GACNNNGTC | 1 cut(s) | 216 |
| VneI | GTGCAC | 2 cut(s) | 1521, 1527 |
| VpaK11BI | GGWCC | 1 cut(s) | 1715 |
| VspI | ATTAAT | 1 cut(s) | 1748 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 22, 557, 615, 1440 |
| XapI | RAATTY | 2 cut(s) | 622, 1694 |
| XceI | RCATGY | 7 cut(s) | 815, 893, 914, 1306, 2082, 2146, 2373 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1302 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1894 |
| XspI | CTAG | 5 cut(s) | 108, 1196, 2099, 2175, 2300 |
| ZrmI | AGTACT | 1 cut(s) | 442 |
| Zsp2I | ATGCAT | 3 cut(s) | 891, 1032, 1952 |