Leishmanolysin-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G42620 AT5G42620 |
| fragaria_vesca | FvH4_2g40290 FvH4_2g40290 FvH4_2g40290 |
| malus_domestica | MD08G1036300.v1.1 |
| prunus_persica | Prupe.1G383600_v2.0.a1 |
| pyrus_communis | pycom08g02900 pycom15g02830 |
| rosa_chinensis | RchiOBHm_Chr6g0300451 |
| rosa_laevigata | RLG00000011336 |
| rosa_multiflora | Rmu_sc0001670.1_g000004 Rmu_sc0014364.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00167770 |
| rosa_rugosa | Rorug06G0296200 |
| rosa_samantha | Rh6AG408800 Rh6BG416000 Rh6CG423500 Rh6DG409200 |
| rosa_wichuraiana | Rw6G035770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 969, 1917 |
| Acc65I | GGTACC | 1 cut(s) | 1239 |
| AccB1I | GGYRCC | 3 cut(s) | 1239, 2264, 2291 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 509 |
| AccI | GTMKAC | 1 cut(s) | 2203 |
| AccII | CGCG | 1 cut(s) | 1119 |
| AciI | CCGC | 7 cut(s) | 646, 669, 1009, 1067, 1119, 2071, 2377 |
| AclI | AACGTT | 1 cut(s) | 2133 |
| AclWI | GGATC | 6 cut(s) | 491, 504, 917, 1185, 1525, 2342 |
| AcsI | RAATTY | 6 cut(s) | 318, 366, 1081, 1737, 1831, 2066 |
| AcuI | CTGAAG | 2 cut(s) | 744, 882 |
| AcvI | CACGTG | 1 cut(s) | 698 |
| AflIII | ACRYGT | 1 cut(s) | 829 |
| AgeI | ACCGGT | 1 cut(s) | 764 |
| AgsI | TTSAA | 8 cut(s) | 324, 626, 710, 1203, 1846, 1862, 2345, 2541 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 65 |
| AjiI | CACGTC | 1 cut(s) | 1940 |
| AjnI | CCWGG | 4 cut(s) | 226, 1747, 2257, 2267 |
| AleI | CACNNNNGTG | 1 cut(s) | 1668 |
| Alw21I | GWGCWC | 1 cut(s) | 1543 |
| Alw26I | GTCTC | 1 cut(s) | 35 |
| Alw44I | GTGCAC | 1 cut(s) | 1539 |
| AlwI | GGATC | 6 cut(s) | 491, 504, 917, 1185, 1525, 2342 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1929 |
| Ama87I | CYCGRG | 1 cut(s) | 77 |
| AoxI | GGCC | 4 cut(s) | 151, 1215, 1332, 1596 |
| ApaLI | GTGCAC | 1 cut(s) | 1539 |
| ApoI | RAATTY | 6 cut(s) | 318, 366, 1081, 1737, 1831, 2066 |
| AsiGI | ACCGGT | 1 cut(s) | 764 |
| Asp718I | GGTACC | 1 cut(s) | 1239 |
| AspLEI | GCGC | 1 cut(s) | 1119 |
| AspS9I | GGNCC | 4 cut(s) | 152, 1332, 1420, 2440 |
| AsuC2I | CCSGG | 2 cut(s) | 155, 1775 |
| AsuHPI | GGTGA | 5 cut(s) | 284, 455, 524, 1577, 1772 |
| AsuNHI | GCTAGC | 1 cut(s) | 2516 |
| AvaI | CYCGRG | 1 cut(s) | 77 |
| AvaII | GGWCC | 2 cut(s) | 1420, 2440 |
| BaeGI | GKGCMC | 3 cut(s) | 1438, 1543, 2188 |
| BamHI | GGATCC | 1 cut(s) | 496 |
| BanI | GGYRCC | 3 cut(s) | 1239, 2264, 2291 |
| BbrPI | CACGTG | 1 cut(s) | 698 |
| BbsI | GAAGAC | 2 cut(s) | 717, 1464 |
| Bbv12I | GWGCWC | 1 cut(s) | 1543 |
| BbvCI | CCTCAGC | 1 cut(s) | 1386 |
| BccI | CCATC | 8 cut(s) | 671, 1006, 1100, 1230, 1508, 1694, 2048, 2354 |
| BceAI | ACGGC | 2 cut(s) | 50, 980 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1480, 1514 |
| BciT130I | CCWGG | 4 cut(s) | 228, 1749, 2259, 2269 |
| BciVI | GTATCC | 1 cut(s) | 1177 |
| BclI | TGATCA | 1 cut(s) | 802 |
| BcnI | CCSGG | 2 cut(s) | 155, 1775 |
| BcoDI | GTCTC | 1 cut(s) | 35 |
| BfmI | CTRYAG | 2 cut(s) | 1930, 2207 |
| BfuI | GTATCC | 1 cut(s) | 1177 |
| Bme1390I | CCNGG | 6 cut(s) | 155, 228, 1749, 1775, 2259, 2269 |
| Bme18I | GGWCC | 2 cut(s) | 1420, 2440 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 65 |
| BmeT110I | CYCGRG | 1 cut(s) | 77 |
| BmgBI | CACGTC | 1 cut(s) | 1940 |
| BmgT120I | GGNCC | 4 cut(s) | 152, 1332, 1420, 2440 |
| BmiI | GGNNCC | 7 cut(s) | 498, 1241, 1333, 1421, 1889, 2266, 2293 |
| BmrFI | CCNGG | 6 cut(s) | 155, 228, 1749, 1775, 2259, 2269 |
| BmrI | ACTGGG | 5 cut(s) | 149, 1147, 1423, 1809, 2184 |
| BmsI | GCATC | 7 cut(s) | 201, 337, 373, 1714, 1859, 2223, 2292 |
| BmtI | GCTAGC | 1 cut(s) | 2520 |
| BmuI | ACTGGG | 5 cut(s) | 149, 1147, 1423, 1809, 2184 |
| BpiI | GAAGAC | 2 cut(s) | 717, 1464 |
| BpmI | CTGGAG | 1 cut(s) | 2539 |
| Bpu10I | CCTNAGC | 2 cut(s) | 616, 1386 |
| BpuEI | CTTGAG | 1 cut(s) | 111 |
| BpuMI | CCSGG | 2 cut(s) | 155, 1775 |
| BsaAI | YACGTR | 2 cut(s) | 698, 1371 |
| BsaJI | CCNNGG | 7 cut(s) | 1034, 1194, 1288, 1642, 1747, 1891, 2257 |
| BsaWI | WCCGGW | 1 cut(s) | 764 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 26, 149, 179, 235, 265 |
| Bse118I | RCCGGY | 1 cut(s) | 764 |
| Bse3DI | GCAATG | 5 cut(s) | 15, 308, 1339, 1829, 2030 |
| BseBI | CCWGG | 4 cut(s) | 228, 1749, 2259, 2269 |
| BseDI | CCNNGG | 7 cut(s) | 1034, 1194, 1288, 1642, 1747, 1891, 2257 |
| BseMI | GCAATG | 5 cut(s) | 15, 308, 1339, 1829, 2030 |
| BseMII | CTCAG | 4 cut(s) | 52, 1068, 1287, 1377 |
| BseRI | GAGGAG | 1 cut(s) | 834 |
| BseSI | GKGCMC | 3 cut(s) | 1438, 1543, 2188 |
| BseYI | CCCAGC | 2 cut(s) | 548, 1922 |
| BsgI | GTGCAG | 2 cut(s) | 102, 514 |
| Bsh1236I | CGCG | 1 cut(s) | 1119 |
| BshFI | GGCC | 4 cut(s) | 153, 1217, 1334, 1598 |
| BshNI | GGYRCC | 3 cut(s) | 1239, 2264, 2291 |
| BshTI | ACCGGT | 1 cut(s) | 764 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1543 |
| BsiHKCI | CYCGRG | 1 cut(s) | 77 |
| BsiSI | CCGG | 3 cut(s) | 155, 765, 1775 |
| BslFI | GGGAC | 4 cut(s) | 422, 1433, 1905, 2378 |
| BsmAI | GTCTC | 1 cut(s) | 35 |
| BsmFI | GGGAC | 4 cut(s) | 422, 1433, 1905, 2378 |
| BsmI | GAATGC | 2 cut(s) | 1048, 1070 |
| BsnI | GGCC | 4 cut(s) | 153, 1217, 1334, 1598 |
| BsoBI | CYCGRG | 1 cut(s) | 77 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1438, 1543, 2188 |
| Bsp1407I | TGTACA | 4 cut(s) | 240, 334, 685, 1523 |
| Bsp143I | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| Bsp19I | CCATGG | 1 cut(s) | 1891 |
| BspACI | CCGC | 7 cut(s) | 646, 669, 1009, 1067, 1119, 2071, 2377 |
| BspANI | GGCC | 4 cut(s) | 153, 1217, 1334, 1598 |
| BspCNI | CTCAG | 4 cut(s) | 51, 1069, 1288, 1378 |
| BspFNI | CGCG | 1 cut(s) | 1119 |
| BspLI | GGNNCC | 7 cut(s) | 498, 1241, 1333, 1421, 1889, 2266, 2293 |
| BspMAI | CTGCAG | 1 cut(s) | 2211 |
| BspOI | GCTAGC | 1 cut(s) | 2520 |
| BspPI | GGATC | 6 cut(s) | 491, 504, 917, 1185, 1525, 2342 |
| BspT107I | GGYRCC | 3 cut(s) | 1239, 2264, 2291 |
| BsrDI | GCAATG | 5 cut(s) | 15, 308, 1339, 1829, 2030 |
| BsrFI | RCCGGY | 1 cut(s) | 764 |
| BsrGI | TGTACA | 4 cut(s) | 240, 334, 685, 1523 |
| BssAI | RCCGGY | 1 cut(s) | 764 |
| BssECI | CCNNGG | 7 cut(s) | 1034, 1194, 1288, 1642, 1747, 1891, 2257 |
| BssMI | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| BssNAI | GTATAC | 1 cut(s) | 2204 |
| BssT1I | CCWWGG | 3 cut(s) | 1288, 1642, 1891 |
| Bst1107I | GTATAC | 1 cut(s) | 2204 |
| Bst2UI | CCWGG | 4 cut(s) | 228, 1749, 2259, 2269 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1998 |
| BstAUI | TGTACA | 4 cut(s) | 240, 334, 685, 1523 |
| BstBAI | YACGTR | 2 cut(s) | 698, 1371 |
| BstC8I | GCNNGC | 7 cut(s) | 667, 1438, 1479, 2089, 2325, 2329, 2518 |
| BstDEI | CTNAG | 8 cut(s) | 38, 51, 572, 616, 1077, 1296, 1386, 2528 |
| BstDSI | CCRYGG | 3 cut(s) | 1034, 1194, 1891 |
| BstEII | GGTNACC | 1 cut(s) | 1015 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 575, 633 |
| BstFNI | CGCG | 1 cut(s) | 1119 |
| BstHHI | GCGC | 1 cut(s) | 1119 |
| BstKTI | GATC | 6 cut(s) | 499, 805, 925, 1193, 1520, 2337 |
| BstMAI | GTCTC | 1 cut(s) | 35 |
| BstMBI | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 116, 445, 1998, 2097, 2106, 2289, 2420 |
| BstNI | CCWGG | 4 cut(s) | 228, 1749, 2259, 2269 |
| BstNSI | RCATGY | 4 cut(s) | 669, 833, 911, 2418 |
| BstPI | GGTNACC | 1 cut(s) | 1015 |
| BstSCI | CCNGG | 6 cut(s) | 153, 226, 1747, 1773, 2257, 2267 |
| BstSFI | CTRYAG | 2 cut(s) | 1930, 2207 |
| BstSLI | GKGCMC | 3 cut(s) | 1438, 1543, 2188 |
| BstSNI | TACGTA | 1 cut(s) | 1371 |
| BstUI | CGCG | 1 cut(s) | 1119 |
| BstV2I | GAAGAC | 2 cut(s) | 717, 1464 |
| BstX2I | RGATCY | 3 cut(s) | 496, 1190, 2334 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1649 |
| BstYI | RGATCY | 3 cut(s) | 496, 1190, 2334 |
| BstZ17I | GTATAC | 1 cut(s) | 2204 |
| BsuI | GTATCC | 1 cut(s) | 1177 |
| BsuRI | GGCC | 4 cut(s) | 153, 1217, 1334, 1598 |
| BtgI | CCRYGG | 3 cut(s) | 1034, 1194, 1891 |
| BtrI | CACGTC | 1 cut(s) | 1940 |
| BtsI | GCAGTG | 2 cut(s) | 792, 2004 |
| Cac8I | GCNNGC | 7 cut(s) | 667, 1438, 1479, 2089, 2325, 2329, 2518 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1929 |
| CfoI | GCGC | 1 cut(s) | 1119 |
| Cfr10I | RCCGGY | 1 cut(s) | 764 |
| Cfr13I | GGNCC | 4 cut(s) | 152, 1332, 1420, 2440 |
| CseI | GACGC | 1 cut(s) | 1920 |
| CsiI | ACCWGGT | 1 cut(s) | 226 |
| CspAI | ACCGGT | 1 cut(s) | 764 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1176, 1211, 1915, 1950 |
| DdeI | CTNAG | 8 cut(s) | 38, 51, 572, 616, 1077, 1296, 1386, 2528 |
| DpnI | GATC | 6 cut(s) | 498, 804, 924, 1192, 1519, 2336 |
| DpnII | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 969, 1917 |
| DriI | GACNNNNNGTC | 1 cut(s) | 65 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 969, 1917 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 65 |
| EciI | GGCGGA | 1 cut(s) | 1024 |
| Eco105I | TACGTA | 1 cut(s) | 1371 |
| Eco130I | CCWWGG | 3 cut(s) | 1288, 1642, 1891 |
| Eco32I | GATATC | 2 cut(s) | 133, 1058 |
| Eco47I | GGWCC | 2 cut(s) | 1420, 2440 |
| Eco57I | CTGAAG | 2 cut(s) | 744, 882 |
| Eco72I | CACGTG | 1 cut(s) | 698 |
| Eco88I | CYCGRG | 1 cut(s) | 77 |
| Eco91I | GGTNACC | 1 cut(s) | 1015 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 575, 633 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1332, 1420 |
| EcoO65I | GGTNACC | 1 cut(s) | 1015 |
| EcoRI | GAATTC | 1 cut(s) | 2066 |
| EcoRII | CCWGG | 4 cut(s) | 226, 1747, 2257, 2267 |
| EcoRV | GATATC | 2 cut(s) | 133, 1058 |
| EcoT14I | CCWWGG | 3 cut(s) | 1288, 1642, 1891 |
| EcoT22I | ATGCAT | 2 cut(s) | 909, 1050 |
| ErhI | CCWWGG | 3 cut(s) | 1288, 1642, 1891 |
| FaqI | GGGAC | 4 cut(s) | 422, 1433, 1905, 2378 |
| FauI | CCCGC | 1 cut(s) | 2370 |
| FbaI | TGATCA | 1 cut(s) | 802 |
| FblI | GTMKAC | 1 cut(s) | 2203 |
| GlaI | GCGC | 1 cut(s) | 1118 |
| GsaI | CCCAGC | 2 cut(s) | 552, 1926 |
| GsuI | CTGGAG | 1 cut(s) | 2539 |
| HaeIII | GGCC | 4 cut(s) | 153, 1217, 1334, 1598 |
| HapII | CCGG | 3 cut(s) | 155, 765, 1775 |
| HgaI | GACGC | 1 cut(s) | 1920 |
| HhaI | GCGC | 1 cut(s) | 1119 |
| Hin6I | GCGC | 1 cut(s) | 1117 |
| HinP1I | GCGC | 1 cut(s) | 1117 |
| HincII | GTYRAC | 1 cut(s) | 1675 |
| HindII | GTYRAC | 1 cut(s) | 1675 |
| HindIII | AAGCTT | 2 cut(s) | 437, 1001 |
| HinfI | GANTC | 3 cut(s) | 42, 60, 2549 |
| HpaII | CCGG | 3 cut(s) | 155, 765, 1775 |
| HphI | GGTGA | 5 cut(s) | 284, 455, 524, 1577, 1772 |
| Hpy188I | TCNGA | 8 cut(s) | 41, 169, 417, 1078, 1513, 1900, 2080, 2440 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 7 cut(s) | 213, 299, 337, 486, 547, 1856, 2042 |
| HpyCH4IV | ACGT | 6 cut(s) | 697, 799, 1320, 1370, 1939, 2133 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 116, 445, 1998, 2097, 2106, 2289, 2420 |
| HpyF3I | CTNAG | 8 cut(s) | 38, 51, 572, 616, 1077, 1296, 1386, 2528 |
| HpySE526I | ACGT | 6 cut(s) | 697, 799, 1320, 1370, 1939, 2133 |
| HspAI | GCGC | 1 cut(s) | 1117 |
| KpnI | GGTACC | 1 cut(s) | 1243 |
| Ksp22I | TGATCA | 1 cut(s) | 802 |
| Kzo9I | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| LmnI | GCTCC | 5 cut(s) | 847, 1578, 1919, 2006, 2420 |
| LweI | GCATC | 7 cut(s) | 201, 337, 373, 1714, 1859, 2223, 2292 |
| MabI | ACCWGGT | 1 cut(s) | 226 |
| MaeII | ACGT | 6 cut(s) | 697, 799, 1320, 1370, 1939, 2133 |
| MalI | GATC | 6 cut(s) | 498, 804, 924, 1192, 1519, 2336 |
| MboI | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| MboII | GAAGA | 6 cut(s) | 722, 1115, 1238, 1464, 1878, 2278 |
| MfeI | CAATTG | 2 cut(s) | 1355, 1401 |
| MflI | RGATCY | 3 cut(s) | 496, 1190, 2334 |
| MhlI | GDGCHC | 3 cut(s) | 1438, 1543, 2188 |
| MlyI | GAGTC | 1 cut(s) | 54 |
| MmeI | TCCRAC | 2 cut(s) | 84, 395 |
| Mph1103I | ATGCAT | 2 cut(s) | 909, 1050 |
| MseI | TTAA | 2 cut(s) | 1755, 2130 |
| MslI | CAYNNNNRTG | 3 cut(s) | 834, 1668, 2040 |
| MspA1I | CMGCKG | 4 cut(s) | 691, 860, 2073, 2323 |
| MspI | CCGG | 3 cut(s) | 155, 765, 1775 |
| MspR9I | CCNGG | 6 cut(s) | 155, 228, 1749, 1775, 2259, 2269 |
| MunI | CAATTG | 2 cut(s) | 1355, 1401 |
| Mva1269I | GAATGC | 2 cut(s) | 1048, 1070 |
| MvaI | CCWGG | 4 cut(s) | 228, 1749, 2259, 2269 |
| MvnI | CGCG | 1 cut(s) | 1119 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 116, 445, 1998, 2097, 2106, 2289, 2420 |
| NciI | CCSGG | 2 cut(s) | 155, 1775 |
| NcoI | CCATGG | 1 cut(s) | 1891 |
| NdeII | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| NheI | GCTAGC | 1 cut(s) | 2516 |
| NlaIV | GGNNCC | 7 cut(s) | 498, 1241, 1333, 1421, 1889, 2266, 2293 |
| NmuCI | GTSAC | 3 cut(s) | 392, 512, 2351 |
| NsiI | ATGCAT | 2 cut(s) | 909, 1050 |
| NspI | RCATGY | 4 cut(s) | 669, 833, 911, 2418 |
| OliI | CACNNNNGTG | 1 cut(s) | 1668 |
| PaeI | GCATGC | 1 cut(s) | 669 |
| PaeR7I | CTCGAG | 1 cut(s) | 77 |
| PciI | ACATGT | 1 cut(s) | 829 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PctI | GAATGC | 2 cut(s) | 1048, 1070 |
| PfeI | GAWTC | 2 cut(s) | 42, 2549 |
| PflFI | GACNNNGTC | 1 cut(s) | 228 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 509 |
| PinAI | ACCGGT | 1 cut(s) | 764 |
| PleI | GAGTC | 1 cut(s) | 54 |
| PmaCI | CACGTG | 1 cut(s) | 698 |
| PmlI | CACGTG | 1 cut(s) | 698 |
| PpsI | GAGTC | 1 cut(s) | 54 |
| Ppu21I | YACGTR | 2 cut(s) | 698, 1371 |
| PpuMI | RGGWCCY | 1 cut(s) | 1420 |
| PscI | ACATGT | 1 cut(s) | 829 |
| Psp1406I | AACGTT | 1 cut(s) | 2133 |
| Psp5II | RGGWCCY | 1 cut(s) | 1420 |
| Psp6I | CCWGG | 4 cut(s) | 226, 1747, 2257, 2267 |
| PspCI | CACGTG | 1 cut(s) | 698 |
| PspEI | GGTNACC | 1 cut(s) | 1015 |
| PspFI | CCCAGC | 2 cut(s) | 548, 1922 |
| PspGI | CCWGG | 4 cut(s) | 226, 1747, 2257, 2267 |
| PspN4I | GGNNCC | 7 cut(s) | 498, 1241, 1333, 1421, 1889, 2266, 2293 |
| PspPI | GGNCC | 4 cut(s) | 152, 1332, 1420, 2440 |
| PspPPI | RGGWCCY | 1 cut(s) | 1420 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2187, 2219 |
| PstI | CTGCAG | 1 cut(s) | 2211 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1929 |
| PsuI | RGATCY | 3 cut(s) | 496, 1190, 2334 |
| PsyI | GACNNNGTC | 1 cut(s) | 228 |
| PvuII | CAGCTG | 3 cut(s) | 691, 860, 2323 |
| RseI | CAYNNNNRTG | 3 cut(s) | 834, 1668, 2040 |
| SaqAI | TTAA | 2 cut(s) | 1755, 2130 |
| Sau3AI | GATC | 6 cut(s) | 496, 802, 922, 1190, 1517, 2334 |
| Sau96I | GGNCC | 4 cut(s) | 152, 1332, 1420, 2440 |
| SchI | GAGTC | 1 cut(s) | 54 |
| ScrFI | CCNGG | 6 cut(s) | 155, 228, 1749, 1775, 2259, 2269 |
| SduI | GDGCHC | 3 cut(s) | 1438, 1543, 2188 |
| SexAI | ACCWGGT | 1 cut(s) | 226 |
| SfaNI | GCATC | 7 cut(s) | 201, 337, 373, 1714, 1859, 2223, 2292 |
| SfcI | CTRYAG | 2 cut(s) | 1930, 2207 |
| Sfr274I | CTCGAG | 1 cut(s) | 77 |
| SinI | GGWCC | 2 cut(s) | 1420, 2440 |
| SlaI | CTCGAG | 1 cut(s) | 77 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 834, 1668, 2040 |
| SmlI | CTYRAG | 2 cut(s) | 77, 126 |
| SmoI | CTYRAG | 2 cut(s) | 77, 126 |
| SnaBI | TACGTA | 1 cut(s) | 1371 |
| SphI | GCATGC | 1 cut(s) | 669 |
| SsiI | CCGC | 7 cut(s) | 646, 669, 1009, 1067, 1119, 2071, 2377 |
| StyD4I | CCNGG | 6 cut(s) | 153, 226, 1747, 1773, 2257, 2267 |
| StyI | CCWWGG | 3 cut(s) | 1288, 1642, 1891 |
| TaiI | ACGT | 6 cut(s) | 700, 802, 1323, 1373, 1942, 2136 |
| TaqI | TCGA | 1 cut(s) | 78 |
| TatI | WGTACW | 5 cut(s) | 20, 240, 334, 685, 1523 |
| TauI | GCSGC | 2 cut(s) | 1070, 1122 |
| TfiI | GAWTC | 2 cut(s) | 42, 2549 |
| Tru1I | TTAA | 2 cut(s) | 1755, 2130 |
| Tru9I | TTAA | 2 cut(s) | 1755, 2130 |
| TseFI | GTSAC | 3 cut(s) | 392, 512, 2351 |
| Tsp45I | GTSAC | 3 cut(s) | 392, 512, 2351 |
| TspDTI | ATGAA | 8 cut(s) | 1011, 1172, 1176, 1800, 2024, 2108, 2481, 2516 |
| TspGWI | ACGGA | 1 cut(s) | 1183 |
| Tth111I | GACNNNGTC | 1 cut(s) | 228 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 509 |
| VneI | GTGCAC | 1 cut(s) | 1539 |
| VpaK11BI | GGWCC | 2 cut(s) | 1420, 2440 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 575, 633 |
| XapI | RAATTY | 6 cut(s) | 318, 366, 1081, 1737, 1831, 2066 |
| XceI | RCATGY | 4 cut(s) | 669, 833, 911, 2418 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1790 |
| XhoI | CTCGAG | 1 cut(s) | 77 |
| XmiI | GTMKAC | 1 cut(s) | 2203 |
| Zsp2I | ATGCAT | 2 cut(s) | 909, 1050 |