AT5G45690

Protein of unknown function (DUF1264)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0016212
Physical Location & Seq
Reverse (-)
18534999 .. 18536316
1318 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G45690.1

Sequence Viewer

Length: 744 bp
ATGGCGTCGAGCGATGAGCGTCCAGGAGCGTATCCGGCACGTGACGGATCAGAGAACTTACCTCCGGGAGATCCAAAGACGATGAAGACGGTGGTGATGGATAAAGGAGCGGCGATGATGCAATCGTTGAAACCGATCAAACAGATGAGTCTCCATTTGTGTTCTTTCGCTTGTTATGGTCACGATCCTAGCCGTCAGATTGAAGTCAACTTCTATGTTCATCGACTCAACCAAGACTTTCTTCAATGTGCTGTTTACGATTGCGACTCCTCTAAACCCCATCTCATCGGGATCGAGTATATTGTGTCGGAGAGGTTATTTGAGAGTCTTGATCCGGAGGAGCAAAAGCTTTGGCACTCTCATGACTATGAGATCCAAACAGGCCTTCTAGTAACTCCAAGGGTCCCTGAGCTTGTAGCTAAGACAGAGCTTGAAAATATTGCCAAAACTTATGGGAAGTTTTGGTGCACTTGGCAGACCGATCGCGGGGATAAATTGCCACTTGGTGCACCATCACTTATGATGTCACCACAAGACGTGAATATGGGAAAGATCAAGCCAGGGCTATTGAAGAAACGTGACGATGAGTATGGAATCTCGACGGAATCTTTGAAGACGTCTCGAGTTGGAATTATGGGACCGGAGAAGAAAAATTCGATGGCTGATTATTGGGTTCATCACGGAAAAGGATTAGCGGTTGACATAATCGAAACTGAGATGCAGAAATTGGCTCCGTTCCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1264

Protein Analysis

247

Amino Acids

27.85

Weight (kDa)

5.92

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1264 PF06884 44 - 211 2.1e-67 Protein of unknown function (DUF1264)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G45690
fragaria_vesca FvH4_3g06760
malus_domestica MD10G1271700.v1.1 MD17G1093800.v1.1
prunus_persica Prupe.4G070200_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0012391
rosa_laevigata RLG00000031910
rosa_multiflora Rmu_sc0003469.1_g000010
rosa_roxburghii Rroxscaffold_1G00064270
rosa_rugosa Rorug05G0000800
rosa_samantha Rh5AG095200 Rh5BG091500 Rh5CG104400 Rh5DG090900
rosa_wichuraiana Rw5G008330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 620
AccBSI CCGCTC 1 cut(s) 110
AccII CGCG 1 cut(s) 486
AccIII TCCGGA 1 cut(s) 334
AciI CCGC 3 cut(s) 110, 486, 695
AclWI GGATC 6 cut(s) 55, 65, 179, 299, 326, 367
AcsI RAATTY 1 cut(s) 652
AcvI CACGTG 1 cut(s) 41
AcyI GRCGYC 2 cut(s) 5, 617
AdeI CACNNNGTG 1 cut(s) 506
AfiI CCNNNNNNNGG 1 cut(s) 486
AgsI TTSAA 6 cut(s) 130, 203, 245, 434, 571, 613
AjiI CACGTC 1 cut(s) 538
AjnI CCWGG 2 cut(s) 22, 559
AjuI GAANNNNNNNTTGG 4 cut(s) 225, 257, 369, 401
AluBI AGCT 4 cut(s) 349, 412, 419, 430
AluI AGCT 4 cut(s) 349, 412, 419, 430
Alw21I GWGCWC 2 cut(s) 470, 511
Alw26I GTCTC 2 cut(s) 155, 624
Alw44I GTGCAC 2 cut(s) 466, 507
AlwI GGATC 6 cut(s) 55, 65, 179, 299, 326, 367
Ama87I CYCGRG 1 cut(s) 621
Aor13HI TCCGGA 1 cut(s) 334
AoxI GGCC 1 cut(s) 382
ApaLI GTGCAC 2 cut(s) 466, 507
ApoI RAATTY 1 cut(s) 652
ArsI GACNNNNNNTTYG 2 cut(s) 592, 624
AspS9I GGNCC 2 cut(s) 403, 638
AsuC2I CCSGG 1 cut(s) 66
AsuHPI GGTGA 2 cut(s) 106, 519
AvaI CYCGRG 1 cut(s) 621
AvaII GGWCC 2 cut(s) 403, 638
BaeGI GKGCMC 2 cut(s) 470, 511
BbrPI CACGTG 1 cut(s) 41
BbsI GAAGAC 2 cut(s) 92, 620
Bbv12I GWGCWC 2 cut(s) 470, 511
BccI CCATC 4 cut(s) 91, 288, 520, 652
BceAI ACGGC 1 cut(s) 177
BcgI CGANNNNNNTGC 2 cut(s) 464, 498
BciT130I CCWGG 2 cut(s) 24, 561
BciVI GTATCC 1 cut(s) 42
BcnI CCSGG 1 cut(s) 66
BcoDI GTCTC 2 cut(s) 155, 624
BfaI CTAG 2 cut(s) 189, 389
BfuI GTATCC 1 cut(s) 42
BisI GCNGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 112
Bme1390I CCNGG 3 cut(s) 24, 66, 561
Bme18I GGWCC 2 cut(s) 403, 638
BmeT110I CYCGRG 1 cut(s) 621
BmgBI CACGTC 1 cut(s) 538
BmgT120I GGNCC 2 cut(s) 403, 638
BmiI GGNNCC 4 cut(s) 404, 405, 639, 732
BmrFI CCNGG 3 cut(s) 24, 66, 561
BmsI GCATC 2 cut(s) 108, 708
BpiI GAAGAC 2 cut(s) 92, 620
Bpu10I CCTNAGC 1 cut(s) 408
BpuMI CCSGG 1 cut(s) 66
BsaAI YACGTR 1 cut(s) 41
BsaHI GRCGYC 2 cut(s) 5, 617
BsaJI CCNNGG 2 cut(s) 398, 560
BsaWI WCCGGW 2 cut(s) 334, 640
Bsc4I CCNNNNNNNGG 1 cut(s) 486
BseAI TCCGGA 1 cut(s) 334
BseBI CCWGG 2 cut(s) 24, 561
BseDI CCNNGG 2 cut(s) 398, 560
BseLI CCNNNNNNNGG 1 cut(s) 486
BseMII CTCAG 2 cut(s) 399, 705
BseRI GAGGAG 2 cut(s) 259, 353
BseSI GKGCMC 2 cut(s) 470, 511
Bsh1236I CGCG 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 484
BshFI GGCC 1 cut(s) 384
BsiEI CGRYCG 1 cut(s) 484
BsiHKAI GWGCWC 2 cut(s) 470, 511
BsiHKCI CYCGRG 1 cut(s) 621
BsiSI CCGG 4 cut(s) 35, 65, 335, 641
BslFI GGGAC 2 cut(s) 389, 651
BslI CCNNNNNNNGG 1 cut(s) 486
BsmAI GTCTC 2 cut(s) 155, 624
BsmBI CGTCTC 1 cut(s) 624
BsmFI GGGAC 2 cut(s) 389, 651
BsnI GGCC 1 cut(s) 384
BsoBI CYCGRG 1 cut(s) 621
Bsp1286I GDGCHC 2 cut(s) 470, 511
Bsp13I TCCGGA 1 cut(s) 334
Bsp143I GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
BspACI CCGC 3 cut(s) 110, 486, 695
BspANI GGCC 1 cut(s) 384
BspCNI CTCAG 2 cut(s) 400, 706
BspEI TCCGGA 1 cut(s) 334
BspFNI CGCG 1 cut(s) 486
BspHI TCATGA 1 cut(s) 361
BspLI GGNNCC 4 cut(s) 404, 405, 639, 732
BspPI GGATC 6 cut(s) 55, 65, 179, 299, 326, 367
BsrBI CCGCTC 1 cut(s) 110
BssECI CCNNGG 2 cut(s) 398, 560
BssMI GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
BssNI GRCGYC 2 cut(s) 5, 617
BssT1I CCWWGG 1 cut(s) 398
Bst2UI CCWGG 2 cut(s) 24, 561
Bst4CI ACNGT 1 cut(s) 91
BstACI GRCGYC 2 cut(s) 5, 617
BstBAI YACGTR 1 cut(s) 41
BstDEI CTNAG 3 cut(s) 408, 420, 714
BstFNI CGCG 1 cut(s) 486
BstKTI GATC 9 cut(s) 50, 73, 138, 187, 294, 334, 375, 484, 555
BstMAI GTCTC 2 cut(s) 155, 624
BstMBI GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
BstMCI CGRYCG 1 cut(s) 484
BstMWI GCNNNNNNNGC 1 cut(s) 35
BstNI CCWGG 2 cut(s) 24, 561
BstSCI CCNGG 3 cut(s) 22, 64, 559
BstSLI GKGCMC 2 cut(s) 470, 511
BstUI CGCG 1 cut(s) 486
BstV2I GAAGAC 2 cut(s) 92, 620
BstX2I RGATCY 2 cut(s) 70, 372
BstYI RGATCY 2 cut(s) 70, 372
BsuI GTATCC 1 cut(s) 42
BsuRI GGCC 1 cut(s) 384
BtgZI GCGATG 2 cut(s) 27, 128
BtrI CACGTC 1 cut(s) 538
CciI TCATGA 1 cut(s) 361
Cfr13I GGNCC 2 cut(s) 403, 638
CseI GACGC 1 cut(s) 8
CviAII CATG 1 cut(s) 362
DdeI CTNAG 3 cut(s) 408, 420, 714
DpnI GATC 9 cut(s) 49, 72, 137, 186, 293, 333, 374, 483, 554
DpnII GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
DraIII CACNNNGTG 1 cut(s) 506
Eco130I CCWWGG 1 cut(s) 398
Eco147I AGGCCT 1 cut(s) 384
Eco47I GGWCC 2 cut(s) 403, 638
Eco72I CACGTG 1 cut(s) 41
Eco88I CYCGRG 1 cut(s) 621
EcoO109I RGGNCCY 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 22, 559
EcoT14I CCWWGG 1 cut(s) 398
ErhI CCWWGG 1 cut(s) 398
Esp3I CGTCTC 1 cut(s) 624
FaeI CATG 1 cut(s) 365
FalI AAGNNNNNCTT 2 cut(s) 225, 257
FaqI GGGAC 2 cut(s) 389, 651
FatI CATG 1 cut(s) 361
FauI CCCGC 1 cut(s) 479
Fnu4HI GCNGC 1 cut(s) 111
Fsp4HI GCNGC 1 cut(s) 111
FspBI CTAG 2 cut(s) 189, 389
GluI GCNGC 1 cut(s) 111
HaeIII GGCC 1 cut(s) 384
HapII CCGG 4 cut(s) 35, 65, 335, 641
HgaI GACGC 1 cut(s) 8
Hin1I GRCGYC 2 cut(s) 5, 617
Hin1II CATG 1 cut(s) 365
HincII GTYRAC 2 cut(s) 208, 700
HindII GTYRAC 2 cut(s) 208, 700
HindIII AAGCTT 1 cut(s) 347
HinfI GANTC 6 cut(s) 148, 225, 266, 325, 594, 605
HpaII CCGG 4 cut(s) 35, 65, 335, 641
HphI GGTGA 2 cut(s) 106, 519
Hpy166II GTNNAC 5 cut(s) 208, 256, 468, 509, 700
Hpy188I TCNGA 3 cut(s) 52, 198, 310
Hpy188III TCNNGA 7 cut(s) 182, 289, 329, 335, 362, 598, 621
Hpy8I GTNNAC 5 cut(s) 208, 256, 468, 509, 700
Hpy99I CGWCG 2 cut(s) 10, 604
HpyAV CCTTC 1 cut(s) 395
HpyCH4III ACNGT 1 cut(s) 91
HpyCH4IV ACGT 4 cut(s) 40, 537, 577, 617
HpyCH4V TGCA 4 cut(s) 121, 468, 509, 721
HpyF10VI GCNNNNNNNGC 1 cut(s) 35
HpyF3I CTNAG 3 cut(s) 408, 420, 714
HpySE526I ACGT 4 cut(s) 40, 537, 577, 617
Hsp92I GRCGYC 2 cut(s) 5, 617
Hsp92II CATG 1 cut(s) 365
KflI GGGWCCC 1 cut(s) 403
Kpn2I TCCGGA 1 cut(s) 334
Kzo9I GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
LmnI GCTCC 4 cut(s) 26, 107, 340, 736
LweI GCATC 2 cut(s) 108, 708
MaeI CTAG 2 cut(s) 189, 389
MaeII ACGT 4 cut(s) 40, 537, 577, 617
MaeIII GTNAC 5 cut(s) 41, 179, 391, 525, 578
MalI GATC 9 cut(s) 49, 72, 137, 186, 293, 333, 374, 483, 554
MbiI CCGCTC 1 cut(s) 110
MboI GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
MboII GAAGA 5 cut(s) 97, 233, 583, 625, 658
MflI RGATCY 2 cut(s) 70, 372
MhlI GDGCHC 2 cut(s) 470, 511
MluCI AATT 4 cut(s) 494, 630, 652, 725
MlyI GAGTC 4 cut(s) 157, 219, 260, 334
MmeI TCCRAC 2 cut(s) 288, 607
MnlI CCTC 4 cut(s) 72, 280, 306, 331
MroI TCCGGA 1 cut(s) 334
MslI CAYNNNNRTG 2 cut(s) 360, 366
MspI CCGG 4 cut(s) 35, 65, 335, 641
MspR9I CCNGG 3 cut(s) 24, 66, 561
MvaI CCWGG 2 cut(s) 24, 561
MvnI CGCG 1 cut(s) 486
MwoI GCNNNNNNNGC 1 cut(s) 35
NciI CCSGG 1 cut(s) 66
NdeII GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
NlaIII CATG 1 cut(s) 365
NlaIV GGNNCC 4 cut(s) 404, 405, 639, 732
NmuCI GTSAC 4 cut(s) 41, 179, 525, 578
PaeR7I CTCGAG 1 cut(s) 621
PagI TCATGA 1 cut(s) 361
PceI AGGCCT 1 cut(s) 384
PcsI WCGNNNNNNNCGW 1 cut(s) 131
PfeI GAWTC 2 cut(s) 594, 605
PfoI TCCNGGA 2 cut(s) 22, 64
PkrI GCNGC 1 cut(s) 112
Ple19I CGATCG 1 cut(s) 484
PleI GAGTC 4 cut(s) 156, 219, 260, 333
PmaCI CACGTG 1 cut(s) 41
PmlI CACGTG 1 cut(s) 41
PpsI GAGTC 4 cut(s) 156, 219, 260, 333
Ppu21I YACGTR 1 cut(s) 41
PpuMI RGGWCCY 1 cut(s) 403
Psp5II RGGWCCY 1 cut(s) 403
Psp6I CCWGG 2 cut(s) 22, 559
PspCI CACGTG 1 cut(s) 41
PspGI CCWGG 2 cut(s) 22, 559
PspN4I GGNNCC 4 cut(s) 404, 405, 639, 732
PspPI GGNCC 2 cut(s) 403, 638
PspPPI RGGWCCY 1 cut(s) 403
PsuI RGATCY 2 cut(s) 70, 372
PvuI CGATCG 1 cut(s) 484
RseI CAYNNNNRTG 2 cut(s) 360, 366
SatI GCNGC 1 cut(s) 111
Sau3AI GATC 9 cut(s) 47, 70, 135, 184, 291, 331, 372, 481, 552
Sau96I GGNCC 2 cut(s) 403, 638
SchI GAGTC 4 cut(s) 157, 219, 260, 334
ScrFI CCNGG 3 cut(s) 24, 66, 561
SduI GDGCHC 2 cut(s) 470, 511
SfaNI GCATC 2 cut(s) 108, 708
Sfr274I CTCGAG 1 cut(s) 621
SinI GGWCC 2 cut(s) 403, 638
SlaI CTCGAG 1 cut(s) 621
SmiMI CAYNNNNRTG 2 cut(s) 360, 366
SmlI CTYRAG 1 cut(s) 621
SmoI CTYRAG 1 cut(s) 621
Sse9I AATT 4 cut(s) 494, 630, 652, 725
SseBI AGGCCT 1 cut(s) 384
SsiI CCGC 3 cut(s) 110, 486, 695
SspI AATATT 1 cut(s) 439
SspMI CTAG 2 cut(s) 189, 389
StuI AGGCCT 1 cut(s) 384
StyD4I CCNGG 3 cut(s) 22, 64, 559
StyI CCWWGG 1 cut(s) 398
TaaI ACNGT 1 cut(s) 91
TaiI ACGT 4 cut(s) 43, 540, 580, 620
TaqI TCGA 7 cut(s) 8, 223, 294, 599, 622, 656, 708
TaqII GACCGA 1 cut(s) 494
TasI AATT 4 cut(s) 494, 630, 652, 725
TauI GCSGC 1 cut(s) 113
TfiI GAWTC 2 cut(s) 594, 605
TseFI GTSAC 4 cut(s) 41, 179, 525, 578
Tsp45I GTSAC 4 cut(s) 41, 179, 525, 578
TspDTI ATGAA 3 cut(s) 98, 209, 665
TspGWI ACGGA 4 cut(s) 60, 617, 696, 723
VneI GTGCAC 2 cut(s) 466, 507
VpaK11BI GGWCC 2 cut(s) 403, 638
XapI RAATTY 1 cut(s) 652
XhoI CTCGAG 1 cut(s) 621
XspI CTAG 2 cut(s) 189, 389
ZraI GACGTC 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.