AT5G47820
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005255
Physical Location & Seq
Forward (+)
19366133 .. 19372815
6683 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G47820.1

Sequence Viewer

Length: 3108 bp
ATGGAATCTACGCCGCCACCGGATGATTGTTCCGTTAAGGTTGCTGTTCACATCAGACCACTCATCGGCGACGAAAGGATTCAAGGTTGTCAAGATTGTGTCACTGTCGTTACCGGTAAACCACAGGTACAAATTGGATCACATTCTTTTACATTTGATCATGTATATGGGAGCTCTGGTTCTCCATCTACTGAAATGTATGAAGAATGTGCTGCCCCTCTTGTTGATGGTTTATTTCAAGGCTACAATGCTACCGTTCTTGCTTATGGACAAACGGGTTCCGGTAAAACATATACAATGGGTACTGGCTGCGGAGACAGCAGCCAGACTGGTATCATCCCTCAAGTTATGAACGCTCTTTTCACCAAGATAGAGACTTTGAAGCAGCAGATTGAGTTTCAGATTCATGTTTCTTTTATTGAGATTCATAAAGAAGAGGTTCAAGATTTGCTGGATCCTTGTACTGTTAATAAATCAGACACTAATAACACTGGACATGTTGGTAAGGTAGCACATGTCCCTGGGAAGCCACCGATACAGATTCGAGAAACATCCAACGGTGTTATCACACTAGCTGGATCCACAGAAGTAAGTGTTAGTACGTTGAAAGAGATGGCTGCTTGCCTTGACCAAGGTTCGGTTAGCAGGGCTACTGGTAGTACTAACATGAACAATCAGTCCAGTCGTTCACATGCCATTTTCACTATCACCGTGGAGCAAATGCGCAAAATTAATACGGATTCTCCTGAAAACGGTGCTTACAATGGGAGCTTGAAAGAAGAATATTTGTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGTTCAGAACGAGCCAAAAGAACTGGTTCAGACGGTTTGAGATTTAAGGAAGGAGTTCACATCAACAAAGGCCTCCTTGCGCTTGGTAATGTTATCAGTGCGCTCGGTGATGAGAAAAAGCGTAAAGATGGTGCCCATGTTCCCTACAGAGACAGTAAACTTACACGGCTTTTGCAGGATTCCCTTGGTGGTAACAGCAGAACTGTGATGATAGCTTGCATTAGTCCTGCAGATATTAACGCGGAGGAGACACTTAACACTTTGAAATATGCAAACCGTGCTCGAAACATCCGAAATAAACCTGTTGTTAATAGAGATCCTGTGTCTAGTGAGATGCTAAAAATGCGTCAACAGGTAGAATACTTGCAGGCAGAACTCTCCTTACGGACCGGAGGATCCTCATGTGCAGAAGTACAGGCTCTTAAAGAAAGGATTGTTTGGCTTGAAACTGCTAATGAAGAACTTTGCCGCGAACTTCATGAGTACCGTAGCAGATGTCCTGGTGTAGAGCATTCTGAAAAAGACTTTAAAGACATAAGAGCTGATGATATTGTTGGTTCTGTCAGACCCGATGGGCTGAAAAGGAGCTTGCACAGTATAGAGTCCTCTAATTACCCCATGGTTGAAGCCACAACAGGTGATTCAAGGGAAATTGATGAAGAAGCAAAGGAATGGGAGCATAAGCTCTTGCAAAATAGTATGGACAAAGAGTTGTATGAACTGAACCGCCGTCTAGAGGAAAAAGAGTCTGAAATGAAGCTGTTTGACGGCTATGATCCGGCTGCGTTAAAGCAGCATTTTGGAAAGAAAATTGCAGAGGTGGAGGATGAAAAGAGATCAGTTCAGGAAGAAAGAAACCGTTTGTTGGCTGAAATTGAGAACCTTGCTTCTGATGGTCAAGCACAGAAGTTGCAAGATGTTCATGCTCAGAACTTAAAAGCGCTTGAAGCACAGATTCTAGACCTTAAGAAAAAGCAAGAGAGCCAAGTTCAGCTACTGAAACAGAAACAAAAGAGTGATGACGCGGCTCGGAGGTTACAAGATGAAATCCAATCCATCAAGGCACAAAAGGTTCAACTGCAGCACAGAATGAAACAAGAAGCAGAACAGTTTCGACAGTGGAAAGCCTCCCGAGAGAAGGAACTTTTGCAGTTACGGAAAGAAGGGAGAAAGAGCGAGTATGAAAGGCATAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTTCTTCAGAGGAAGACAGAAGAGGCTGCAATGGCTACCAAAAGGTTGAAAGAGTTGTTAGAAGCTCGAAAATCATCTCCTCGTGAACACTCAGCTGGTACAAATGGCTTTGGAACAAATGGTCAGACAAATGAGAAGTCATTGCAGCGTTGGCTTGATCATGAGTTGGAAGTCATGGTAAATGTGCATGAAGTACGTCATGAGTATGAGAAACAAAGCCACGTACGAGCTGCACTGGCGGAAGAGTTGGCTGTTTTAAGACAAGTAGATGAGTTTGCAGTGAAAGGATTAAGTCCTCCAAGAGGAAAGAATGGCTTTGCTAGGGCTTCATCGTTGTCACCTAATGCAAGGATGGCCCGTATATCTTCACTTGAGAACATGCTCGTTATATCTTCTAATTCTTTAGTAGCGATGGCATCACAACTTTCTGAGGCAGAAGAACGGGAGCGTGCTTTTACAAACCGTGGTCGCTGGAACCAGCTACGATCAATGGGAGAGGCAAAGAATTTGCTTCAGTATATGTTCAACTCTCTTGCAGAAACAAGGTGTCAATTATGGGAGAAGGATGTAGAGATAAAAGAAATGAAAGATCAGTTCAAAGAAATTGTTGGTCTTCTGAGGCAGAGTGAGTTGAGAAGGAAAGAAGCAGAAAAGGAATTAAAATTGAGGGAGCAAGCAATTGCAACTTCATTAGGTACGCCGCCGAGTTCAGTGAAACATGTAGCTGAAGACTTGAGCACACCTTCTCCAATGACCGTGCCAGCACAGAAACAGCTCAAATTTACGCCAGGGATTGCTAACGGAAAAGTGAGAGGACCGGCTGCATTTCTTGATACAAACAAGAAGATGGTACCGATGGGACAAGTATCGATGAGAAAACTATCAGCCGTAGGAAAACAGGGTGGGAGACTTTGGAGGTGGAAGAGAAGTCATCACCAGTGGATTGTTCAATTCAAATGGAAATGGCAAAAGCCATGGAGACTCTCTGAGTGGATTAGGACAAGTGACGAAACACTCCTCAAGTCAAAACCCCGACTTAAGGCTCTACCTAATAAGATCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000022 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000819 GO:0000910 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0005881 GO:0005938 GO:0006355 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0008088 GO:0008089 GO:0008150 GO:0008574 GO:0009664 GO:0009832 GO:0009889 GO:0009891 GO:0009893 GO:0009937 GO:0009966 GO:0009987 GO:0010215 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010970 GO:0015630 GO:0016043 GO:0016192 GO:0016363 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0023051 GO:0030198 GO:0030496 GO:0030705 GO:0030863 GO:0030981 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0042127 GO:0042546 GO:0042623 GO:0043062 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0045171 GO:0045229 GO:0045893 GO:0045935 GO:0046907 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051179 GO:0051225 GO:0051231 GO:0051234 GO:0051252 GO:0051254 GO:0051255 GO:0051256 GO:0051276 GO:0051301 GO:0051641 GO:0051649 GO:0055028 GO:0060255 GO:0061640 GO:0065007 GO:0070013 GO:0070726 GO:0070925 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071840 GO:0071944 GO:0080090 GO:0090307 GO:0097159 GO:0098813 GO:0098930 GO:0099080 GO:0099081 GO:0099111 GO:0099512 GO:0099513 GO:0099568 GO:0140014 GO:1901363 GO:1902680 GO:1902850 GO:1903047 GO:1903506 GO:1903508 GO:1990939 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

1035

Amino Acids

116.73

Weight (kDa)

8.93

Isoelectric Point (pI)

47.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kinesin PF00225 19 - 370 6.5e-105 Kinesin motor domain
Microtub_bd PF16796 38 - 151 2.3e-21 Microtubule binding
KIF21A_4th PF25764 487 - 661 5.7e-51 KIF21A-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 725
Acc65I GGTACC 1 cut(s) 2893
AccB1I GGYRCC 2 cut(s) 950, 2893
AccB7I CCANNNNNTGG 1 cut(s) 2041
AccII CGCG 3 cut(s) 1061, 1290, 1844
AciI CCGC 8 cut(s) 14, 312, 1061, 1288, 1546, 1844, 2282, 2744
AclWI GGATC 9 cut(s) 145, 449, 462, 573, 586, 1130, 1209, 1222, 1589
AcsI RAATTY 2 cut(s) 2548, 2822
AcuI CTGAAG 3 cut(s) 2033, 2540, 2790
AfeI AGCGCT 1 cut(s) 1761
AfiI CCNNNNNNNGG 9 cut(s) 65, 637, 752, 1555, 1684, 1957, 2041, 2345, 3082
AflII CTTAAG 2 cut(s) 1784, 3080
AflIII ACRYGT 3 cut(s) 496, 514, 2761
AgeI ACCGGT 1 cut(s) 113
AjnI CCWGG 3 cut(s) 520, 1318, 2830
AloI GAACNNNNNNTCC 4 cut(s) 163, 195, 662, 694
Alw21I GWGCWC 3 cut(s) 176, 1102, 2783
Alw26I GTCTC 6 cut(s) 309, 368, 963, 1061, 2944, 3016
AlwI GGATC 9 cut(s) 145, 449, 462, 573, 586, 1130, 1209, 1222, 1589
AlwNI CAGNNNCTG 1 cut(s) 1816
Ama87I CYCGRG 1 cut(s) 1950
Aor51HI AGCGCT 1 cut(s) 1761
AoxI GGCC 2 cut(s) 889, 2397
ApoI RAATTY 2 cut(s) 2548, 2822
ArsI GACNNNNNNTTYG 2 cut(s) 2165, 2197
AseI ATTAAT 1 cut(s) 732
AsiGI ACCGGT 1 cut(s) 113
Asp700I GAANNNNTTC 5 cut(s) 78, 438, 844, 873, 1929
Asp718I GGTACC 1 cut(s) 2893
AspLEI GCGC 5 cut(s) 726, 901, 922, 1762, 2034
AspS9I GGNCC 3 cut(s) 1206, 2398, 2858
AsuHPI GGTGA 6 cut(s) 355, 700, 938, 1469, 2373, 2969
AvaI CYCGRG 1 cut(s) 1950
AvaII GGWCC 2 cut(s) 1206, 2858
BaeGI GKGCMC 1 cut(s) 955
BamHI GGATCC 3 cut(s) 454, 578, 1214
BanI GGYRCC 2 cut(s) 950, 2893
BanII GRGCYC 1 cut(s) 176
BauI CACGAG 1 cut(s) 2124
BbsI GAAGAC 3 cut(s) 2063, 2648, 2778
Bbv12I GWGCWC 3 cut(s) 176, 1102, 2783
BceAI ACGGC 4 cut(s) 1001, 1533, 1603, 2915
BciT130I CCWGG 3 cut(s) 522, 1320, 2832
BclI TGATCA 2 cut(s) 157, 2200
BcoDI GTCTC 6 cut(s) 309, 368, 963, 1061, 2944, 3016
BfaI CTAG 5 cut(s) 572, 1146, 1553, 1778, 2364
BfmI CTRYAG 3 cut(s) 964, 1047, 1898
BfoI RGCGCY 2 cut(s) 1763, 2035
BfrI CTTAAG 2 cut(s) 1784, 3080
BglII AGATCT 1 cut(s) 811
BmcAI AGTACT 1 cut(s) 661
Bme1390I CCNGG 3 cut(s) 522, 1320, 2832
Bme18I GGWCC 2 cut(s) 1206, 2858
BmeT110I CYCGRG 1 cut(s) 1950
BmgT120I GGNCC 3 cut(s) 1206, 2398, 2858
BmiI GGNNCC 7 cut(s) 280, 456, 580, 952, 1216, 2519, 2895
BmrFI CCNGG 3 cut(s) 522, 1320, 2832
BmsI GCATC 2 cut(s) 1143, 2468
BpiI GAAGAC 3 cut(s) 2063, 2648, 2778
BpuEI CTTGAG 4 cut(s) 327, 2435, 2797, 3047
Bsa29I ATCGAT 1 cut(s) 2912
BsaAI YACGTR 1 cut(s) 2266
BsaJI CCNNGG 9 cut(s) 520, 521, 631, 711, 1003, 1437, 2506, 2831, 3017
BsaWI WCCGGW 4 cut(s) 19, 113, 281, 1208
BsaXI ACNNNNNCTCC 6 cut(s) 163, 193, 727, 757, 2773, 2803
Bsc4I CCNNNNNNNGG 9 cut(s) 65, 637, 752, 1555, 1684, 1957, 2041, 2345, 3082
Bse118I RCCGGY 2 cut(s) 113, 2860
Bse1I ACTGG 8 cut(s) 310, 334, 496, 658, 681, 847, 2283, 2980
Bse3DI GCAATG 2 cut(s) 2079, 2183
BseBI CCWGG 3 cut(s) 522, 1320, 2832
BseCI ATCGAT 1 cut(s) 2912
BseDI CCNNGG 9 cut(s) 520, 521, 631, 711, 1003, 1437, 2506, 2831, 3017
BseGI GGATG 7 cut(s) 28, 336, 551, 1107, 1651, 2400, 2614
BseLI CCNNNNNNNGG 9 cut(s) 65, 637, 752, 1555, 1684, 1957, 2041, 2345, 3082
BseMI GCAATG 2 cut(s) 2079, 2183
BseMII CTCAG 5 cut(s) 1760, 2148, 2463, 2651, 3021
BseNI ACTGG 8 cut(s) 310, 334, 496, 658, 681, 847, 2283, 2980
BseRI GAGGAG 3 cut(s) 1079, 2112, 3050
BseSI GKGCMC 1 cut(s) 955
BsgI GTGCAG 2 cut(s) 1245, 2259
Bsh1236I CGCG 3 cut(s) 1061, 1290, 1844
BshFI GGCC 2 cut(s) 891, 2399
BshNI GGYRCC 2 cut(s) 950, 2893
BshTI ACCGGT 1 cut(s) 113
BshVI ATCGAT 1 cut(s) 2912
BsiHKAI GWGCWC 3 cut(s) 176, 1102, 2783
BsiHKCI CYCGRG 1 cut(s) 1950
BsiSI CCGG 6 cut(s) 20, 114, 282, 1209, 1598, 2861
BsiWI CGTACG 1 cut(s) 2266
BslFI GGGAC 2 cut(s) 503, 2916
BslI CCNNNNNNNGG 9 cut(s) 65, 637, 752, 1555, 1684, 1957, 2041, 2345, 3082
BsmAI GTCTC 6 cut(s) 309, 368, 963, 1061, 2944, 3016
BsmFI GGGAC 2 cut(s) 503, 2916
BsmI GAATGC 1 cut(s) 1330
BsnI GGCC 2 cut(s) 891, 2399
BsoBI CYCGRG 1 cut(s) 1950
Bsp1286I GDGCHC 4 cut(s) 176, 955, 1102, 2783
Bsp19I CCATGG 2 cut(s) 1437, 3017
BspACI CCGC 8 cut(s) 14, 312, 1061, 1288, 1546, 1844, 2282, 2744
BspANI GGCC 2 cut(s) 891, 2399
BspCNI CTCAG 5 cut(s) 1759, 2147, 2464, 2652, 3022
BspDI ATCGAT 1 cut(s) 2912
BspFNI CGCG 3 cut(s) 1061, 1290, 1844
BspHI TCATGA 3 cut(s) 1297, 2203, 2242
BspLI GGNNCC 7 cut(s) 280, 456, 580, 952, 1216, 2519, 2895
BspMAI CTGCAG 2 cut(s) 1051, 1902
BspPI GGATC 9 cut(s) 145, 449, 462, 573, 586, 1130, 1209, 1222, 1589
BspT107I GGYRCC 2 cut(s) 950, 2893
BspTI CTTAAG 2 cut(s) 1784, 3080
BsrDI GCAATG 2 cut(s) 2079, 2183
BsrFI RCCGGY 2 cut(s) 113, 2860
BsrI ACTGG 8 cut(s) 310, 334, 496, 658, 681, 847, 2283, 2980
BssAI RCCGGY 2 cut(s) 113, 2860
BssECI CCNNGG 9 cut(s) 520, 521, 631, 711, 1003, 1437, 2506, 2831, 3017
BssSI CACGAG 1 cut(s) 2124
BssT1I CCWWGG 4 cut(s) 631, 1003, 1437, 3017
Bst2BI CACGAG 1 cut(s) 2124
Bst2UI CCWGG 3 cut(s) 522, 1320, 2832
Bst6I CTCTTC 4 cut(s) 429, 2058, 2280, 2960
BstAFI CTTAAG 2 cut(s) 1784, 3080
BstAPI GCANNNNNTGC 2 cut(s) 1097, 2014
BstBAI YACGTR 1 cut(s) 2266
BstC8I GCNNGC 8 cut(s) 622, 1036, 1188, 1409, 2019, 2493, 2718, 2805
BstDEI CTNAG 6 cut(s) 805, 1746, 2134, 2472, 2660, 3030
BstDSI CCRYGG 4 cut(s) 711, 1437, 2506, 3017
BstENI CCTNNNNNAGG 1 cut(s) 2343
BstF5I GGATG 7 cut(s) 28, 336, 551, 1107, 1651, 2400, 2614
BstFNI CGCG 3 cut(s) 1061, 1290, 1844
BstH2I RGCGCY 2 cut(s) 1763, 2035
BstHHI GCGC 5 cut(s) 726, 901, 922, 1762, 2034
BstMAI GTCTC 6 cut(s) 309, 368, 963, 1061, 2944, 3016
BstMWI GCNNNNNNNGC 9 cut(s) 318, 1097, 1162, 1766, 2014, 2075, 2194, 2279, 2396
BstNI CCWGG 3 cut(s) 522, 1320, 2832
BstNSI RCATGY 5 cut(s) 500, 518, 695, 2425, 2765
BstSCI CCNGG 3 cut(s) 520, 1318, 2830
BstSFI CTRYAG 3 cut(s) 964, 1047, 1898
BstSLI GKGCMC 1 cut(s) 955
BstUI CGCG 3 cut(s) 1061, 1290, 1844
BstV2I GAAGAC 3 cut(s) 2063, 2648, 2778
BstX2I RGATCY 5 cut(s) 454, 578, 811, 1135, 1214
BstYI RGATCY 5 cut(s) 454, 578, 811, 1135, 1214
Bsu15I ATCGAT 1 cut(s) 2912
BsuRI GGCC 2 cut(s) 891, 2399
BsuTUI ATCGAT 1 cut(s) 2912
BtgI CCRYGG 4 cut(s) 711, 1437, 2506, 3017
BtgZI GCGATG 1 cut(s) 2468
BtsCI GGATG 7 cut(s) 28, 336, 551, 1107, 1651, 2400, 2614
BtsI GCAGTG 1 cut(s) 2328
BtsIMutI CAGTG 8 cut(s) 102, 489, 922, 1943, 2276, 2328, 2760, 2987
Cac8I GCNNGC 8 cut(s) 622, 1036, 1188, 1409, 2019, 2493, 2718, 2805
CaiI CAGNNNCTG 1 cut(s) 1816
CciI TCATGA 3 cut(s) 1297, 2203, 2242
CfoI GCGC 5 cut(s) 726, 901, 922, 1762, 2034
Cfr10I RCCGGY 2 cut(s) 113, 2860
Cfr13I GGNCC 3 cut(s) 1206, 2398, 2858
ClaI ATCGAT 1 cut(s) 2912
CpoI CGGWCCG 1 cut(s) 1206
CseI GACGC 2 cut(s) 1154, 1850
CspAI ACCGGT 1 cut(s) 113
CspI CGGWCCG 1 cut(s) 1206
DdeI CTNAG 6 cut(s) 805, 1746, 2134, 2472, 2660, 3030
DraI TTTAAA 2 cut(s) 1348, 2025
Eam1104I CTCTTC 4 cut(s) 429, 2058, 2280, 2960
EarI CTCTTC 4 cut(s) 429, 2058, 2280, 2960
EciI GGCGGA 1 cut(s) 2297
Ecl136II GAGCTC 1 cut(s) 174
Eco130I CCWWGG 4 cut(s) 631, 1003, 1437, 3017
Eco147I AGGCCT 1 cut(s) 891
Eco24I GRGCYC 1 cut(s) 176
Eco47I GGWCC 2 cut(s) 1206, 2858
Eco47III AGCGCT 1 cut(s) 1761
Eco53kI GAGCTC 1 cut(s) 174
Eco57I CTGAAG 3 cut(s) 2033, 2540, 2790
Eco88I CYCGRG 1 cut(s) 1950
EcoICRI GAGCTC 1 cut(s) 174
EcoNI CCTNNNNNAGG 1 cut(s) 2343
EcoRII CCWGG 3 cut(s) 520, 1318, 2830
EcoT14I CCWWGG 4 cut(s) 631, 1003, 1437, 3017
EcoT38I GRGCYC 1 cut(s) 176
ErhI CCWWGG 4 cut(s) 631, 1003, 1437, 3017
FalI AAGNNNNNCTT 6 cut(s) 788, 820, 879, 911, 2342, 2374
FaqI GGGAC 2 cut(s) 503, 2916
FbaI TGATCA 2 cut(s) 157, 2200
FokI GGATG 7 cut(s) 35, 323, 538, 1094, 1658, 2407, 2621
FriOI GRGCYC 1 cut(s) 176
FspBI CTAG 5 cut(s) 572, 1146, 1553, 1778, 2364
FspI TGCGCA 1 cut(s) 725
GlaI GCGC 5 cut(s) 725, 900, 921, 1761, 2033
HaeII RGCGCY 2 cut(s) 1763, 2035
HaeIII GGCC 2 cut(s) 891, 2399
HapII CCGG 6 cut(s) 20, 114, 282, 1209, 1598, 2861
HgaI GACGC 2 cut(s) 1154, 1850
HhaI GCGC 5 cut(s) 726, 901, 922, 1762, 2034
Hin6I GCGC 5 cut(s) 724, 899, 920, 1760, 2032
HinP1I GCGC 5 cut(s) 724, 899, 920, 1760, 2032
HincII GTYRAC 1 cut(s) 1169
HindII GTYRAC 1 cut(s) 1169
HindIII AAGCTT 1 cut(s) 2019
HpaII CCGG 6 cut(s) 20, 114, 282, 1209, 1598, 2861
HphI GGTGA 6 cut(s) 355, 700, 938, 1469, 2373, 2969
Hpy166II GTNNAC 7 cut(s) 49, 119, 689, 877, 977, 1169, 2129
Hpy8I GTNNAC 7 cut(s) 49, 119, 689, 877, 977, 1169, 2129
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 6 cut(s) 863, 1951, 1976, 2599, 2673, 2796
HpyCH4IV ACGT 3 cut(s) 602, 2239, 2265
HpyF10VI GCNNNNNNNGC 9 cut(s) 318, 1097, 1162, 1766, 2014, 2075, 2194, 2279, 2396
HpyF3I CTNAG 6 cut(s) 805, 1746, 2134, 2472, 2660, 3030
HpySE526I ACGT 3 cut(s) 602, 2239, 2265
HspAI GCGC 5 cut(s) 724, 899, 920, 1760, 2032
KpnI GGTACC 1 cut(s) 2897
Ksp22I TGATCA 2 cut(s) 157, 2200
LmnI GCTCC 7 cut(s) 171, 715, 768, 1404, 1495, 2488, 2713
LweI GCATC 2 cut(s) 1143, 2468
MaeI CTAG 5 cut(s) 572, 1146, 1553, 1778, 2364
MaeII ACGT 3 cut(s) 602, 2239, 2265
MaeIII GTNAC 7 cut(s) 100, 109, 1010, 1854, 1971, 2379, 3047
MfeI CAATTG 1 cut(s) 2721
MflI RGATCY 5 cut(s) 454, 578, 811, 1135, 1214
MhlI GDGCHC 4 cut(s) 176, 955, 1102, 2783
MlyI GAGTC 3 cut(s) 1430, 1574, 3018
MmeI TCCRAC 2 cut(s) 579, 2190
MroXI GAANNNNTTC 5 cut(s) 78, 438, 844, 873, 1929
MslI CAYNNNNRTG 2 cut(s) 165, 2247
MspA1I CMGCKG 1 cut(s) 2138
MspCI CTTAAG 2 cut(s) 1784, 3080
MspI CCGG 6 cut(s) 20, 114, 282, 1209, 1598, 2861
MspR9I CCNGG 3 cut(s) 522, 1320, 2832
MunI CAATTG 1 cut(s) 2721
Mva1269I GAATGC 1 cut(s) 1330
MvaI CCWGG 3 cut(s) 522, 1320, 2832
MvnI CGCG 3 cut(s) 1061, 1290, 1844
MwoI GCNNNNNNNGC 9 cut(s) 318, 1097, 1162, 1766, 2014, 2075, 2194, 2279, 2396
NcoI CCATGG 2 cut(s) 1437, 3017
NlaIV GGNNCC 7 cut(s) 280, 456, 580, 952, 1216, 2519, 2895
NmeAIII GCCGAG 1 cut(s) 2772
NmuCI GTSAC 3 cut(s) 100, 2379, 3047
NsbI TGCGCA 1 cut(s) 725
NspI RCATGY 5 cut(s) 500, 518, 695, 2425, 2765
PagI TCATGA 3 cut(s) 1297, 2203, 2242
PasI CCCWGGG 1 cut(s) 521
PceI AGGCCT 1 cut(s) 891
PciI ACATGT 3 cut(s) 496, 514, 2761
PcsI WCGNNNNNNNCGW 1 cut(s) 1108
PctI GAATGC 1 cut(s) 1330
PdmI GAANNNNTTC 5 cut(s) 78, 438, 844, 873, 1929
PfeI GAWTC 9 cut(s) 5, 79, 403, 424, 541, 740, 998, 1460, 1774
Pfl23II CGTACG 1 cut(s) 2266
PflMI CCANNNNNTGG 1 cut(s) 2041
PinAI ACCGGT 1 cut(s) 113
PleI GAGTC 3 cut(s) 1429, 1573, 3018
PpsI GAGTC 3 cut(s) 1429, 1573, 3018
Ppu21I YACGTR 1 cut(s) 2266
PscI ACATGT 3 cut(s) 496, 514, 2761
PshBI ATTAAT 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 176
Psp6I CCWGG 3 cut(s) 520, 1318, 2830
PspGI CCWGG 3 cut(s) 520, 1318, 2830
PspLI CGTACG 1 cut(s) 2266
PspN4I GGNNCC 7 cut(s) 280, 456, 580, 952, 1216, 2519, 2895
PspPI GGNCC 3 cut(s) 1206, 2398, 2858
PsrI GAACNNNNNNTAC 2 cut(s) 1185, 1217
PstI CTGCAG 2 cut(s) 1051, 1902
PstNI CAGNNNCTG 1 cut(s) 1816
PsuI RGATCY 5 cut(s) 454, 578, 811, 1135, 1214
PvuII CAGCTG 1 cut(s) 2138
RseI CAYNNNNRTG 2 cut(s) 165, 2247
Rsr2I CGGWCCG 1 cut(s) 1206
RsrII CGGWCCG 1 cut(s) 1206
SacI GAGCTC 1 cut(s) 176
Sau96I GGNCC 3 cut(s) 1206, 2398, 2858
ScaI AGTACT 1 cut(s) 661
SchI GAGTC 3 cut(s) 1430, 1574, 3018
ScrFI CCNGG 3 cut(s) 522, 1320, 2832
SduI GDGCHC 4 cut(s) 176, 955, 1102, 2783
SfaNI GCATC 2 cut(s) 1143, 2468
SfcI CTRYAG 3 cut(s) 964, 1047, 1898
SinI GGWCC 2 cut(s) 1206, 2858
SmiMI CAYNNNNRTG 2 cut(s) 165, 2247
SmlI CTYRAG 6 cut(s) 342, 1784, 2414, 2776, 3062, 3080
SmoI CTYRAG 6 cut(s) 342, 1784, 2414, 2776, 3062, 3080
SseBI AGGCCT 1 cut(s) 891
SsiI CCGC 8 cut(s) 14, 312, 1061, 1288, 1546, 1844, 2282, 2744
SspI AATATT 1 cut(s) 785
SspMI CTAG 5 cut(s) 572, 1146, 1553, 1778, 2364
SstI GAGCTC 1 cut(s) 176
StuI AGGCCT 1 cut(s) 891
StyD4I CCNGG 3 cut(s) 520, 1318, 2830
StyI CCWWGG 4 cut(s) 631, 1003, 1437, 3017
TaiI ACGT 3 cut(s) 605, 2242, 2268
TaqI TCGA 5 cut(s) 544, 1102, 1933, 2110, 2912
TatI WGTACW 3 cut(s) 461, 659, 1231
TauI GCSGC 4 cut(s) 16, 1290, 1847, 2746
TfiI GAWTC 9 cut(s) 5, 79, 403, 424, 541, 740, 998, 1460, 1774
TscAI CASTG 8 cut(s) 109, 496, 922, 1943, 2283, 2328, 2760, 2987
TseFI GTSAC 3 cut(s) 100, 2379, 3047
Tsp45I GTSAC 3 cut(s) 100, 2379, 3047
TspGWI ACGGA 5 cut(s) 22, 752, 1219, 1990, 2859
TspRI CASTG 8 cut(s) 109, 496, 922, 1943, 2283, 2328, 2760, 2987
Van91I CCANNNNNTGG 1 cut(s) 2041
Vha464I CTTAAG 2 cut(s) 1784, 3080
VpaK11BI GGWCC 2 cut(s) 1206, 2858
VspI ATTAAT 1 cut(s) 732
XagI CCTNNNNNAGG 1 cut(s) 2343
XapI RAATTY 2 cut(s) 2548, 2822
XbaI TCTAGA 2 cut(s) 1552, 1777
XceI RCATGY 5 cut(s) 500, 518, 695, 2425, 2765
XmnI GAANNNNTTC 5 cut(s) 78, 438, 844, 873, 1929
XspI CTAG 5 cut(s) 572, 1146, 1553, 1778, 2364
ZrmI AGTACT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.