Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007399

Physical Location & Seq

Genomic Coordinates Reverse (-)

19527767 .. 19530430

Gene Structure 2664 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G48160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGGAACATCATCTGGTTCGAATCATCCTCACCAAATGTTACCACCACGTCAACAACAACGAAGTGGAGGAGGACTTGAAACAGCTCTTTCACTAGTCTCTTCAGATCAAGAGCCGCGTCGCGAGTCTCCAGCGGAGAGTGCGAGTTCTCAAGAAACATGGCCACTAGGAGACACTGTTGCTGGGAAGAAGTCAATGAGTCAAAAGACAGAGCCTGATTCTATGGAACAAACTGTGAATGTGATGCACCATGTTTCGAATGCGGACAAGGTATCGGTACGGGATATCGCTAGGGAAAGAGTTGAGTTAGTTGCAGAGAGAATGCATCGATTACCGGATGAGTTTCTTGACGAGTTAAAGAACGGTCTTAAGTCTATCCTTGAAGGGAATGTAGCGCAGAGTGTTGATGAGTTCATGTTCTTGCAGAAGGTTGTTCAGAGTAGAACTGATTTGAGCTCTGTAACACTTGTTAGAGCTCATCGGGTGCAGCTTGAGATACTTGTAGCGATAAATACCGGGATTCAGGCGTTTTTGCATCCGAATATTAGTCTGTCTCAGCCGTCTCTTATCGAGATTTTTGTATACAAGAGATGTAGAAACATAGCTTGCCAAAATCAACTACCTGCTGATGATTGCTACTGTGATATATGTACTAATAGGAAAGGGTTTTGTAACCTTTGTATGTGTACGATCTGTAACAAGTTTGATTTTTCGGTTAATACTTGCCGCTGGATCGGATGTGACTTGTGTTCCCACTGGACTCATACGGATTGTGCTATTCGGGATGGACAGATCACCACTGGATCCTCTGCTAAGAATAATACTTCAGGTCCAGGAGAGATAGTGTTTAAGTGTCGGGCTTGTAACCGAACGTCTGAGCTGTTGGGATGGGTTAAAGATGTGTTTCAGCACTGTGCACCGAACTGGGATCGAGAATCTTTGATGAAGGAACTTGATTTTGTTAGTAGGATTTTCCGCGGAAGCGAAGATCAACGAGGTAGGAAACTGTTTTGGAAGTGTGAGGAGCTTATTGACAAGATTAAAGGTGGTTTGGCTGAAGCAACTGCTGCCAAATTGATATTAATGTTTTTCCAAGAGATCGAATCAGACTCTGCGAAGAGCTTTGAAAATGGAGAAGGTGGACGTTTGATGGCACCTCAGGATGCATGCAACCGAATTGCTGAAGTTGTACAAGAGACTTTGAGGAAAATGGAGATAGTGGCTGAGGAGAAGATGAGAATGTTCAAGAAGGCACGCATGGCTCTTGAGACATGCGATAGAGAGCTCGAAGACAAAGCCAAGGAAGTTTCAGAACTGAAAGCAGAGAGGCAGAAGAAGAAACTTCAGATAGATGAGCTAGAGAGAATCGTGAGGCTGAAGCAAGCGGAGGCAGACATGTTCCAGCTTAAAGCAAATGAAGCAAAGCGGGAGGCTGATAGGTTGCAGAGGATTGTACTAGCGAAAATGGATAAGTCTGAGGAGGAATACGCAAGTAACTATCTGAAACAGAGGCTGAGTGAGGCCGAGGCAGAGAAGCAGTATCTGTTTGAGAAGATTAAGCTGCAGGAAAACTCAAGGGTGGCATCACAAAGCAGTGGTGGGGGAGGAGACCCGTCACAGGTGATGATGTACTCAAAGATCCGCGATCTGCTTCAAGGATACAATCTCTCTCCCAAGGTTGATCCTCAATTAAACGAGCGTAATCCTTTCAGATCCAATCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006810 GO:0007275 GO:0008150 GO:0009536 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0010014 GO:0010015 GO:0010071 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010468 GO:0010492 GO:0016032 GO:0019222 GO:0019827 GO:0022414 GO:0022622 GO:0031347 GO:0032501 GO:0032502 GO:0040011 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044000 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044766 GO:0046739 GO:0046740 GO:0046794 GO:0046982 GO:0046983 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051701 GO:0051704 GO:0051814 GO:0052126 GO:0052192 GO:0060255 GO:0061458 GO:0065007 GO:0080022 GO:0080134 GO:0090421 GO:0098727 GO:0099402 GO:1902579 GO:1902586 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oberon_cc PHD_Oberon

Protein Analysis

574

Amino Acids

65.08

Weight (kDa)

6.43

Isoelectric Point (pI)

50.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	198 - 322	3e-41	PHD - plant homeodomain finger protein
Oberon_cc	PF16312	416 - 551	4.2e-53	Coiled-coil region of Oberon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48160 AT5G48160
fragaria_vesca	FvH4_6g41110 FvH4_6g41110
malus_domestica	MD09G1122100.v1.1 MD17G1113100.v1.1
prunus_persica	Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1
pyrus_communis	pycom09g04640 pycom17g10470
rosa_chinensis	RchiOBHm_Chr2g0156671
rosa_laevigata	RLG00000020930
rosa_multiflora	Rmu_sc0001130.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092850
rosa_rugosa	Rorug02G0455400
rosa_samantha	Rh2AG520900 Rh2BG534100 Rh2CG505900 Rh2DG542900
rosa_wichuraiana	Rw0G013730 Rw2G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	631
AccB1I	GGYRCC	1 cut(s)	1153
AccI	GTMKAC	1 cut(s)	582
AccII	CGCG	4 cut(s)	118, 123, 978, 1644
AciI	CCGC	9 cut(s)	116, 134, 263, 727, 976, 978, 1385, 1426, 1642
AclWI	GGATC	7 cut(s)	740, 798, 811, 936, 1633, 1676, 1707
AcoI	YGGCCR	1 cut(s)	161
AcuI	CTGAAG	6 cut(s)	87, 810, 1077, 1203, 1328, 1397
AfaI	GTAC	6 cut(s)	279, 652, 688, 1191, 1455, 1631
AfiI	CCNNNNNNNGG	1 cut(s)	1618
AflII	CTTAAG	1 cut(s)	368
AflIII	ACRYGT	1 cut(s)	1395
AgsI	TTSAA	5 cut(s)	80, 383, 1127, 1246, 1655
AhlI	ACTAGT	1 cut(s)	94
AjiI	CACGTC	1 cut(s)	50
AjnI	CCWGG	1 cut(s)	832
Alw21I	GWGCWC	4 cut(s)	458, 478, 919, 1287
Alw26I	GTCTC	8 cut(s)	103, 132, 165, 558, 567, 1190, 1262, 1602
Alw44I	GTGCAC	1 cut(s)	915
AlwI	GGATC	7 cut(s)	740, 798, 811, 936, 1633, 1676, 1707
AlwNI	CAGNNNCTG	4 cut(s)	215, 1112, 1513, 1543
AoxI	GGCC	2 cut(s)	161, 1521
ApaLI	GTGCAC	1 cut(s)	915
ApeKI	GCWGC	3 cut(s)	487, 1067, 1561
AseI	ATTAAT	1 cut(s)	1082
AspLEI	GCGC	1 cut(s)	397
AspS9I	GGNCC	1 cut(s)	830
AsuC2I	CCSGG	1 cut(s)	517
AsuHPI	GGTGA	3 cut(s)	23, 787, 1633
AsuII	TTCGAA	2 cut(s)	20, 257
AvaII	GGWCC	1 cut(s)	830
AxyI	CCTNAGG	1 cut(s)	1158
BaeGI	GKGCMC	1 cut(s)	919
BalI	TGGCCA	1 cut(s)	163
BamHI	GGATCC	1 cut(s)	803
BanI	GGYRCC	1 cut(s)	1153
BanII	GRGCYC	3 cut(s)	458, 478, 1287
BbsI	GAAGAC	1 cut(s)	1296
Bbv12I	GWGCWC	4 cut(s)	458, 478, 919, 1287
BbvCI	CCTCAGC	1 cut(s)	1224
BbvI	GCAGC	3 cut(s)	499, 1054, 1548
BccI	CCATC	3 cut(s)	779, 882, 1144
BceAI	ACGGC	1 cut(s)	544
BciT130I	CCWGG	1 cut(s)	834
BciVI	GTATCC	1 cut(s)	1652
BcnI	CCSGG	1 cut(s)	517
BcoDI	GTCTC	8 cut(s)	103, 132, 165, 558, 567, 1190, 1262, 1602
BcuI	ACTAGT	1 cut(s)	94
BfaI	CTAG	5 cut(s)	95, 167, 291, 1358, 1457
BfmI	CTRYAG	1 cut(s)	1562
BfrI	CTTAAG	1 cut(s)	368
BfuAI	ACCTGC	1 cut(s)	631
BfuI	GTATCC	1 cut(s)	1652
BisI	GCNGC	5 cut(s)	116, 488, 727, 1068, 1562
BlsI	GCNGC	5 cut(s)	117, 489, 728, 1069, 1563
Bme1390I	CCNGG	2 cut(s)	517, 834
Bme18I	GGWCC	1 cut(s)	830
BmgBI	CACGTC	1 cut(s)	50
BmgT120I	GGNCC	1 cut(s)	830
BmiI	GGNNCC	2 cut(s)	805, 1155
BmrFI	CCNGG	2 cut(s)	517, 834
BmrI	ACTGGG	1 cut(s)	934
BmsI	GCATC	5 cut(s)	234, 334, 544, 1153, 1592
BmuI	ACTGGG	1 cut(s)	934
BpiI	GAAGAC	1 cut(s)	1296
BpmI	CTGGAG	1 cut(s)	114
Bpu10I	CCTNAGC	1 cut(s)	1224
Bpu14I	TTCGAA	2 cut(s)	20, 257
BpuEI	CTTGAG	4 cut(s)	135, 512, 1286, 1558
BpuMI	CCSGG	1 cut(s)	517
Bsa29I	ATCGAT	1 cut(s)	328
BsaI	GGTCTC	1 cut(s)	1602
BsaJI	CCNNGG	4 cut(s)	976, 1299, 1524, 1674
BsaWI	WCCGGW	1 cut(s)	334
BsaXI	ACNNNNNCTCC	4 cut(s)	162, 192, 828, 858
Bsc4I	CCNNNNNNNGG	1 cut(s)	1618
Bse1I	ACTGG	3 cut(s)	761, 805, 929
Bse21I	CCTNAGG	1 cut(s)	1158
BseBI	CCWGG	1 cut(s)	834
BseCI	ATCGAT	1 cut(s)	328
BseDI	CCNNGG	4 cut(s)	976, 1299, 1524, 1674
BseGI	GGATG	7 cut(s)	25, 343, 535, 743, 790, 893, 1168
BseLI	CCNNNNNNNGG	1 cut(s)	1618
BseMII	CTCAG	6 cut(s)	569, 867, 1172, 1215, 1467, 1505
BseNI	ACTGG	3 cut(s)	761, 805, 929
BseRI	GAGGAG	5 cut(s)	84, 1037, 1241, 1493, 1620
BseSI	GKGCMC	1 cut(s)	919
BseXI	GCAGC	3 cut(s)	499, 1054, 1548
BseYI	CCCAGC	1 cut(s)	182
BsgI	GTGCAG	1 cut(s)	506
Bsh1236I	CGCG	4 cut(s)	118, 123, 978, 1644
BshFI	GGCC	2 cut(s)	163, 1523
BshNI	GGYRCC	1 cut(s)	1153
BshVI	ATCGAT	1 cut(s)	328
BsiHKAI	GWGCWC	4 cut(s)	458, 478, 919, 1287
BsiSI	CCGG	2 cut(s)	335, 516
BslI	CCNNNNNNNGG	1 cut(s)	1618
BsmAI	GTCTC	8 cut(s)	103, 132, 165, 558, 567, 1190, 1262, 1602
BsmBI	CGTCTC	1 cut(s)	567
BsmI	GAATGC	2 cut(s)	265, 327
BsnI	GGCC	2 cut(s)	163, 1523
Bso31I	GGTCTC	1 cut(s)	1602
Bsp119I	TTCGAA	2 cut(s)	20, 257
Bsp1286I	GDGCHC	4 cut(s)	458, 478, 919, 1287
Bsp1407I	TGTACA	1 cut(s)	1189
Bsp68I	TCGCGA	1 cut(s)	123
BspACI	CCGC	9 cut(s)	116, 134, 263, 727, 976, 978, 1385, 1426, 1642
BspANI	GGCC	2 cut(s)	163, 1523
BspCNI	CTCAG	6 cut(s)	568, 868, 1171, 1216, 1468, 1506
BspDI	ATCGAT	1 cut(s)	328
BspFNI	CGCG	4 cut(s)	118, 123, 978, 1644
BspLI	GGNNCC	2 cut(s)	805, 1155
BspMAI	CTGCAG	1 cut(s)	1566
BspMI	ACCTGC	1 cut(s)	631
BspPI	GGATC	7 cut(s)	740, 798, 811, 936, 1633, 1676, 1707
BspQI	GCTCTTC	1 cut(s)	1112
BspT104I	TTCGAA	2 cut(s)	20, 257
BspT107I	GGYRCC	1 cut(s)	1153
BspTI	CTTAAG	1 cut(s)	368
BspTNI	GGTCTC	1 cut(s)	1602
BsrGI	TGTACA	1 cut(s)	1189
BsrI	ACTGG	3 cut(s)	761, 805, 929
BssECI	CCNNGG	4 cut(s)	976, 1299, 1524, 1674
BssNAI	GTATAC	1 cut(s)	583
BssT1I	CCWWGG	2 cut(s)	1299, 1674
Bst1107I	GTATAC	1 cut(s)	583
Bst2UI	CCWGG	1 cut(s)	834
Bst4CI	ACNGT	6 cut(s)	178, 235, 365, 641, 914, 1008
Bst6I	CTCTTC	2 cut(s)	106, 1112
BstAFI	CTTAAG	1 cut(s)	368
BstAPI	GCANNNNNTGC	1 cut(s)	1067
BstAUI	TGTACA	1 cut(s)	1189
BstBI	TTCGAA	2 cut(s)	20, 257
BstC8I	GCNNGC	4 cut(s)	607, 1168, 1255, 1383
BstDEI	CTNAG	7 cut(s)	555, 813, 876, 1158, 1224, 1476, 1514
BstDSI	CCRYGG	1 cut(s)	976
BstF5I	GGATG	7 cut(s)	25, 343, 535, 743, 790, 893, 1168
BstFNI	CGCG	4 cut(s)	118, 123, 978, 1644
BstHHI	GCGC	1 cut(s)	397
BstMAI	GTCTC	8 cut(s)	103, 132, 165, 558, 567, 1190, 1262, 1602
BstMWI	GCNNNNNNNGC	4 cut(s)	140, 1067, 1259, 1418
BstNI	CCWGG	1 cut(s)	834
BstNSI	RCATGY	3 cut(s)	1170, 1275, 1399
BstSCI	CCNGG	2 cut(s)	515, 832
BstSFI	CTRYAG	1 cut(s)	1562
BstSLI	GKGCMC	1 cut(s)	919
BstUI	CGCG	4 cut(s)	118, 123, 978, 1644
BstV1I	GCAGC	3 cut(s)	499, 1054, 1548
BstV2I	GAAGAC	1 cut(s)	1296
BstX2I	RGATCY	3 cut(s)	803, 1638, 1712
BstYI	RGATCY	3 cut(s)	803, 1638, 1712
BstZ17I	GTATAC	1 cut(s)	583
Bsu15I	ATCGAT	1 cut(s)	328
Bsu36I	CCTNAGG	1 cut(s)	1158
BsuI	GTATCC	1 cut(s)	1652
BsuRI	GGCC	2 cut(s)	163, 1523
BsuTUI	ATCGAT	1 cut(s)	328
BtgI	CCRYGG	1 cut(s)	976
BtrI	CACGTC	1 cut(s)	50
BtsCI	GGATG	7 cut(s)	25, 343, 535, 743, 790, 893, 1168
BtsI	GCAGTG	1 cut(s)	1600
BtsIMutI	CAGTG	5 cut(s)	174, 754, 798, 910, 1600
BtuMI	TCGCGA	1 cut(s)	123
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	4 cut(s)	607, 1168, 1255, 1383
CaiI	CAGNNNCTG	4 cut(s)	215, 1112, 1513, 1543
CfoI	GCGC	1 cut(s)	397
Cfr13I	GGNCC	1 cut(s)	830
Cfr42I	CCGCGG	1 cut(s)	979
ClaI	ATCGAT	1 cut(s)	328
CseI	GACGC	1 cut(s)	107
Csp6I	GTAC	6 cut(s)	278, 651, 687, 1190, 1454, 1630
CviAII	CATG	7 cut(s)	159, 251, 415, 1167, 1258, 1272, 1396
CviQI	GTAC	6 cut(s)	278, 651, 687, 1190, 1454, 1630
DdeI	CTNAG	7 cut(s)	555, 813, 876, 1158, 1224, 1476, 1514
EaeI	YGGCCR	1 cut(s)	161
Eam1104I	CTCTTC	2 cut(s)	106, 1112
EarI	CTCTTC	2 cut(s)	106, 1112
Ecl136II	GAGCTC	3 cut(s)	456, 476, 1285
Eco130I	CCWWGG	2 cut(s)	1299, 1674
Eco24I	GRGCYC	3 cut(s)	458, 478, 1287
Eco31I	GGTCTC	1 cut(s)	1602
Eco32I	GATATC	1 cut(s)	286
Eco47I	GGWCC	1 cut(s)	830
Eco53kI	GAGCTC	3 cut(s)	456, 476, 1285
Eco57I	CTGAAG	6 cut(s)	87, 810, 1077, 1203, 1328, 1397
Eco81I	CCTNAGG	1 cut(s)	1158
EcoICRI	GAGCTC	3 cut(s)	456, 476, 1285
EcoRII	CCWGG	1 cut(s)	832
EcoRV	GATATC	1 cut(s)	286
EcoT14I	CCWWGG	2 cut(s)	1299, 1674
EcoT22I	ATGCAT	2 cut(s)	327, 1168
EcoT38I	GRGCYC	3 cut(s)	458, 478, 1287
ErhI	CCWWGG	2 cut(s)	1299, 1674
Esp3I	CGTCTC	1 cut(s)	567
FaeI	CATG	7 cut(s)	162, 254, 418, 1170, 1261, 1275, 1399
FatI	CATG	7 cut(s)	158, 250, 414, 1166, 1257, 1271, 1395
FauI	CCCGC	1 cut(s)	1419
FblI	GTMKAC	1 cut(s)	582
Fnu4HI	GCNGC	5 cut(s)	116, 488, 727, 1068, 1562
FokI	GGATG	7 cut(s)	12, 350, 522, 750, 797, 900, 1175
FriOI	GRGCYC	3 cut(s)	458, 478, 1287
Fsp4HI	GCNGC	5 cut(s)	116, 488, 727, 1068, 1562
FspBI	CTAG	5 cut(s)	95, 167, 291, 1358, 1457
GlaI	GCGC	1 cut(s)	396
GluI	GCNGC	5 cut(s)	116, 488, 727, 1068, 1562
GsaI	CCCAGC	1 cut(s)	186
GsuI	CTGGAG	1 cut(s)	114
HaeIII	GGCC	2 cut(s)	163, 1523
HapII	CCGG	2 cut(s)	335, 516
HgaI	GACGC	1 cut(s)	107
HhaI	GCGC	1 cut(s)	397
Hin1II	CATG	7 cut(s)	162, 254, 418, 1170, 1261, 1275, 1399
Hin6I	GCGC	1 cut(s)	395
HinP1I	GCGC	1 cut(s)	395
HincII	GTYRAC	1 cut(s)	53
HindII	GTYRAC	1 cut(s)	53
HpaII	CCGG	2 cut(s)	335, 516
HphI	GGTGA	3 cut(s)	23, 787, 1633
Hpy166II	GTNNAC	5 cut(s)	53, 583, 687, 917, 1142
Hpy8I	GTNNAC	5 cut(s)	53, 583, 687, 917, 1142
Hpy99I	CGWCG	1 cut(s)	123
HpyAV	CCTTC	5 cut(s)	377, 421, 940, 1130, 1243
HpyCH4III	ACNGT	6 cut(s)	178, 235, 365, 641, 914, 1008
HpyCH4IV	ACGT	3 cut(s)	49, 872, 1144
HpyF10VI	GCNNNNNNNGC	4 cut(s)	140, 1067, 1259, 1418
HpyF3I	CTNAG	7 cut(s)	555, 813, 876, 1158, 1224, 1476, 1514
HpySE526I	ACGT	3 cut(s)	49, 872, 1144
Hsp92II	CATG	7 cut(s)	162, 254, 418, 1170, 1261, 1275, 1399
HspAI	GCGC	1 cut(s)	395
KspI	CCGCGG	1 cut(s)	979
LguI	GCTCTTC	1 cut(s)	1112
LmnI	GCTCC	1 cut(s)	1024
Lsp1109I	GCAGC	3 cut(s)	499, 1054, 1548
LweI	GCATC	5 cut(s)	234, 334, 544, 1153, 1592
MaeI	CTAG	5 cut(s)	95, 167, 291, 1358, 1457
MaeII	ACGT	3 cut(s)	49, 872, 1144
MaeIII	GTNAC	8 cut(s)	39, 460, 671, 695, 740, 863, 1493, 1614
MboII	GAAGA	9 cut(s)	93, 199, 998, 1129, 1243, 1301, 1345, 1348, 1564
MflI	RGATCY	3 cut(s)	803, 1638, 1712
MhlI	GDGCHC	4 cut(s)	458, 478, 919, 1287
MlsI	TGGCCA	1 cut(s)	163
MluCI	AATT	3 cut(s)	1073, 1176, 1688
MluNI	TGGCCA	1 cut(s)	163
MlyI	GAGTC	4 cut(s)	134, 208, 754, 1103
Mox20I	TGGCCA	1 cut(s)	163
Mph1103I	ATGCAT	2 cut(s)	327, 1168
MscI	TGGCCA	1 cut(s)	163
Msp20I	TGGCCA	1 cut(s)	163
MspA1I	CMGCKG	3 cut(s)	134, 729, 978
MspCI	CTTAAG	1 cut(s)	368
MspI	CCGG	2 cut(s)	335, 516
MspR9I	CCNGG	2 cut(s)	517, 834
Mva1269I	GAATGC	2 cut(s)	265, 327
MvaI	CCWGG	1 cut(s)	834
MvnI	CGCG	4 cut(s)	118, 123, 978, 1644
MwoI	GCNNNNNNNGC	4 cut(s)	140, 1067, 1259, 1418
NciI	CCSGG	1 cut(s)	517
NlaIII	CATG	7 cut(s)	162, 254, 418, 1170, 1261, 1275, 1399
NlaIV	GGNNCC	2 cut(s)	805, 1155
NmeAIII	GCCGAG	1 cut(s)	1549
NmuCI	GTSAC	2 cut(s)	740, 1614
NruI	TCGCGA	1 cut(s)	123
NsiI	ATGCAT	2 cut(s)	327, 1168
NspI	RCATGY	3 cut(s)	1170, 1275, 1399
NspV	TTCGAA	2 cut(s)	20, 257
PaeI	GCATGC	1 cut(s)	1170
PciI	ACATGT	1 cut(s)	1395
PciSI	GCTCTTC	1 cut(s)	1112
PctI	GAATGC	2 cut(s)	265, 327
PfeI	GAWTC	6 cut(s)	22, 218, 520, 935, 1103, 1365
PfoI	TCCNGGA	1 cut(s)	832
PkrI	GCNGC	5 cut(s)	117, 489, 728, 1069, 1563
PleI	GAGTC	4 cut(s)	133, 207, 754, 1103
PpsI	GAGTC	4 cut(s)	133, 207, 754, 1103
PscI	ACATGT	1 cut(s)	1395
PshBI	ATTAAT	1 cut(s)	1082
Psp124BI	GAGCTC	3 cut(s)	458, 478, 1287
Psp6I	CCWGG	1 cut(s)	832
PspFI	CCCAGC	1 cut(s)	182
PspGI	CCWGG	1 cut(s)	832
PspN4I	GGNNCC	2 cut(s)	805, 1155
PspPI	GGNCC	1 cut(s)	830
PstI	CTGCAG	1 cut(s)	1566
PstNI	CAGNNNCTG	4 cut(s)	215, 1112, 1513, 1543
PsuI	RGATCY	3 cut(s)	803, 1638, 1712
RruI	TCGCGA	1 cut(s)	123
RsaI	GTAC	6 cut(s)	279, 652, 688, 1191, 1455, 1631
RsaNI	GTAC	6 cut(s)	278, 651, 687, 1190, 1454, 1630
SacI	GAGCTC	3 cut(s)	458, 478, 1287
SacII	CCGCGG	1 cut(s)	979
SapI	GCTCTTC	1 cut(s)	1112
SatI	GCNGC	5 cut(s)	116, 488, 727, 1068, 1562
Sau96I	GGNCC	1 cut(s)	830
SchI	GAGTC	4 cut(s)	134, 208, 754, 1103
ScrFI	CCNGG	2 cut(s)	517, 834
SduI	GDGCHC	4 cut(s)	458, 478, 919, 1287
SfaNI	GCATC	5 cut(s)	234, 334, 544, 1153, 1592
SfcI	CTRYAG	1 cut(s)	1562
Sfr303I	CCGCGG	1 cut(s)	979
SfuI	TTCGAA	2 cut(s)	20, 257
SgrBI	CCGCGG	1 cut(s)	979
SinI	GGWCC	1 cut(s)	830
SmlI	CTYRAG	5 cut(s)	150, 368, 491, 1265, 1573
SmoI	CTYRAG	5 cut(s)	150, 368, 491, 1265, 1573
SpeI	ACTAGT	1 cut(s)	94
SphI	GCATGC	1 cut(s)	1170
Sse9I	AATT	3 cut(s)	1073, 1176, 1688
SsiI	CCGC	9 cut(s)	116, 134, 263, 727, 976, 978, 1385, 1426, 1642
SspI	AATATT	1 cut(s)	544
SspMI	CTAG	5 cut(s)	95, 167, 291, 1358, 1457
SstI	GAGCTC	3 cut(s)	458, 478, 1287
StyD4I	CCNGG	2 cut(s)	515, 832
StyI	CCWWGG	2 cut(s)	1299, 1674
TaaI	ACNGT	6 cut(s)	178, 235, 365, 641, 914, 1008
TaiI	ACGT	3 cut(s)	52, 875, 1147
TaqI	TCGA	7 cut(s)	20, 257, 328, 570, 931, 1101, 1287
TasI	AATT	3 cut(s)	1073, 1176, 1688
TatI	WGTACW	4 cut(s)	650, 1189, 1453, 1629
TauI	GCSGC	2 cut(s)	118, 729
TfiI	GAWTC	6 cut(s)	22, 218, 520, 935, 1103, 1365
TscAI	CASTG	5 cut(s)	181, 761, 805, 917, 1600
TseFI	GTSAC	2 cut(s)	740, 1614
TseI	GCWGC	3 cut(s)	487, 1067, 1561
Tsp45I	GTSAC	2 cut(s)	740, 1614
TspDTI	ATGAA	3 cut(s)	403, 959, 1431
TspGWI	ACGGA	1 cut(s)	782
TspRI	CASTG	5 cut(s)	181, 761, 805, 917, 1600
Vha464I	CTTAAG	1 cut(s)	368
VneI	GTGCAC	1 cut(s)	915
VpaK11BI	GGWCC	1 cut(s)	830
VspI	ATTAAT	1 cut(s)	1082
XceI	RCATGY	3 cut(s)	1170, 1275, 1399
XmiI	GTMKAC	1 cut(s)	582
XspI	CTAG	5 cut(s)	95, 167, 291, 1358, 1457
Zsp2I	ATGCAT	2 cut(s)	327, 1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.