Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0007399

Physical Location & Seq

Genomic Coordinates Reverse (-)

9686333 .. 9689472

Gene Structure 3140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1113100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGGTACATCATCTGGTTCCAATACTCACCAACAGCCTTCATCAAGAATGCTTCCTCCACGTCAGCAACCACGAGCGGGGGGATTACAAACCTCACTGTCCCTTGTCTCTTCAGATCCTCGGCTGTCCCCAGAAGAACCCAGATCAAATTCTGATCACAGACGCGAGTCCCCTACCGAGAGTGCCAGTTCTCAAGAAACCTGGCCTACTGCTGATGTGATAATGGCAAAGAAGATGGAGAATGGGAAAGCAGAAAATGATTGCCCTGAACAATCAGTCATTCGCCGTCTTTCCAGTGCTGATAAGATATCTCTTCGAGAAATAGCTGGAGAGCGAGTTGATATAATCGCTGAAAAGATGCATCACCTACCCGACGAGTTTCAAGAAGAATTGAAGAACAACCTCCGGGTCATCCTCGATGGGAATGGAGGTTCACAGCAGCGAGAGGAAATTTTTATTTTGCAGAAGCTTGTTCAGAGTAGAGCGGACTTAACAGCTAAGACATTGATTAGAGCACACAGAGTGCAGCTTGAAATCCTTGTTGCAATAAATACCGGGATTCTGGCATTTTTGCATCCAAATATCAGTCTTTCTCAAACTTCCTTAATTGAAGTTTTCGTGTACAAGAGATGCAGGAATATAGCATGCCAAAACCAGATTCCTGCTGATGATTGTACCTGTGAGATATGCACGAAAAGGAATGGTTTCTGCAATCTTTGCATGTGTGTAATCTGTAACAAGTTCGACTTTGAAGTTAACACTTGCCGCTGGGTTGGTTGTGATTTGTGTTCGCATTGGACTCACACTGACTGTGCGATTCGTGATGGACTAATAAGCATGGGACCCTCCGGTAAGAGTGGAGCAGGGCCATCCGAAATGCTTTTCAGGTGTCGAGCTTGCAATCGAACATCTGAGCTATTGGGCTGGGTCAAAGATGTTTTTCAACACTGCGCTCCTGCCTGGGACCGGGAATCTCTGACAAGGGAGCTTGACTTTGTTAGTAGGATTTTTCATGGAAGTGAAGACCCCCGAGGGCAAAAACTCTTTTGGAAGTGTGAGGATCTCAAAGAAAAAATAGAAAGTGGACTTGCAGAGTCGACAGCAGCCTGCAGAGCAATATTGATGTTTTTCCAAGAGCTTGAGGGAGATTCTCCAAAGAGTCTGGAAAACGGGGAAAGTGGACGGCTAATAGCACCACAGGAGGCTTGTAATCGAATCGCTGAAGTGGTGCAGGAGGCCATAAGGAAGATGGAAATGGTTGCTGATGAGAAGATGAGAATGTATAAGAAATCCCGAATGGCTGTTGATGCTTGTGACAGGGAACTCCAGGACAAAGCCAGGGAAGTCCAAGAGCTAAAGCTTGAGAGGCAAAAAAAGAAGAATCAAATTGAAGAGCTGGAGAAAATTGTGAGGCTCAAACATGCAGAGGCTGATATGTTCCAACTCAAGGCCAATGAGGCAAAACGAGAGGCTGACAGGCTCCAGAGGATCGCTCTTGCCAAGTCAGATAAATCAGAGGAAGAATATGCCAACAGTTACTTAAAACAACGGTTGAGTGAAGCCGAGGCAGAAAAGCAGTACCTTTTTGAGAAGATTAAACTGCAAGAGAGTTCGCGAGCATCCCAGAACGGTGGTGGCGGCAGTGGTGACCCTTCGCAGTTGCTTATGTACTCGAAAATGCATGATATGATGCCAAACGAACGCCATCCTTTCAGAAAAAATCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006810 GO:0007275 GO:0008150 GO:0009536 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0010014 GO:0010015 GO:0010071 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010468 GO:0010492 GO:0016032 GO:0019222 GO:0019827 GO:0022414 GO:0022622 GO:0031347 GO:0032501 GO:0032502 GO:0040011 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044000 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044766 GO:0046739 GO:0046740 GO:0046794 GO:0046982 GO:0046983 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051701 GO:0051704 GO:0051814 GO:0052126 GO:0052192 GO:0060255 GO:0061458 GO:0065007 GO:0080022 GO:0080134 GO:0090421 GO:0098727 GO:0099402 GO:1902579 GO:1902586 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oberon_cc PHD_Oberon

Protein Analysis

576

Amino Acids

65.2

Weight (kDa)

6.54

Isoelectric Point (pI)

59.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	211 - 334	2.8e-42	PHD - plant homeodomain finger protein
Oberon_cc	PF16312	429 - 563	1e-50	Coiled-coil region of Oberon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48160 AT5G48160
fragaria_vesca	FvH4_6g41110 FvH4_6g41110
malus_domestica	MD09G1122100.v1.1 MD17G1113100.v1.1
prunus_persica	Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1
pyrus_communis	pycom09g04640 pycom17g10470
rosa_chinensis	RchiOBHm_Chr2g0156671
rosa_laevigata	RLG00000020930
rosa_multiflora	Rmu_sc0001130.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092850
rosa_rugosa	Rorug02G0455400
rosa_samantha	Rh2AG520900 Rh2BG534100 Rh2CG505900 Rh2DG542900
rosa_wichuraiana	Rw0G013730 Rw2G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	77, 485
AccI	GTMKAC	1 cut(s)	1097
AccII	CGCG	2 cut(s)	165, 1615
AciI	CCGC	4 cut(s)	77, 485, 766, 1638
AclWI	GGATC	3 cut(s)	110, 1068, 1496
AcsI	RAATTY	2 cut(s)	148, 450
AcuI	CTGAAG	2 cut(s)	96, 1242
AdeI	CACNNNGTG	1 cut(s)	523
AfaI	GTAC	5 cut(s)	7, 623, 676, 1580, 1670
AfiI	CCNNNNNNNGG	3 cut(s)	77, 966, 1447
AgsI	TTSAA	7 cut(s)	383, 394, 533, 611, 752, 944, 1391
AjiI	CACGTC	1 cut(s)	62
AjnI	CCWGG	4 cut(s)	200, 959, 1326, 1337
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
AloI	GAACNNNNNNTCC	2 cut(s)	415, 447
Alw21I	GWGCWC	1 cut(s)	517
Alw26I	GTCTC	1 cut(s)	112
AlwI	GGATC	3 cut(s)	110, 1068, 1496
AlwNI	CAGNNNCTG	1 cut(s)	1430
Ama87I	CYCGRG	1 cut(s)	1029
AoxI	GGCC	4 cut(s)	203, 866, 1236, 1449
ApeKI	GCWGC	3 cut(s)	439, 526, 1103
ApoI	RAATTY	2 cut(s)	148, 450
Asp700I	GAANNNNTTC	1 cut(s)	704
AspLEI	GCGC	1 cut(s)	953
AspS9I	GGNCC	3 cut(s)	842, 866, 964
AsuC2I	CCSGG	3 cut(s)	407, 556, 968
AsuHPI	GGTGA	3 cut(s)	20, 356, 1658
AvaI	CYCGRG	1 cut(s)	1029
AvaII	GGWCC	2 cut(s)	842, 964
BauI	CACGAG	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	1029
Bbv12I	GWGCWC	1 cut(s)	517
BbvI	GCAGC	3 cut(s)	451, 538, 1115
BccI	CCATC	6 cut(s)	229, 413, 818, 877, 1243, 1713
BceAI	ACGGC	2 cut(s)	270, 1199
BciT130I	CCWGG	4 cut(s)	202, 961, 1328, 1339
BclI	TGATCA	1 cut(s)	154
BcnI	CCSGG	3 cut(s)	407, 556, 968
BcoDI	GTCTC	1 cut(s)	112
BfmI	CTRYAG	1 cut(s)	1108
BglI	GCCNNNNNGGC	1 cut(s)	1457
BisI	GCNGC	5 cut(s)	440, 527, 766, 1104, 1639
BlsI	GCNGC	5 cut(s)	441, 528, 767, 1105, 1640
Bme1390I	CCNGG	7 cut(s)	202, 407, 556, 961, 968, 1328, 1339
Bme18I	GGWCC	2 cut(s)	842, 964
BmeT110I	CYCGRG	1 cut(s)	1029
BmgBI	CACGTC	1 cut(s)	62
BmgT120I	GGNCC	3 cut(s)	842, 866, 964
BmiI	GGNNCC	5 cut(s)	19, 843, 844, 965, 1481
BmrFI	CCNGG	7 cut(s)	202, 407, 556, 961, 968, 1328, 1339
BmsI	GCATC	7 cut(s)	348, 370, 583, 620, 1297, 1628, 1680
BoxI	GACNNNNGTC	1 cut(s)	166
BpiI	GAAGAC	1 cut(s)	1029
BplI	GAGNNNNNCTC	2 cut(s)	1477, 1509
BpmI	CTGGAG	4 cut(s)	348, 1310, 1418, 1466
BpuEI	CTTGAG	4 cut(s)	177, 1160, 1382, 1430
BpuMI	CCSGG	3 cut(s)	407, 556, 968
BsaJI	CCNNGG	5 cut(s)	119, 960, 1030, 1338, 1563
BsaWI	WCCGGW	1 cut(s)	848
BsaXI	ACNNNNNCTCC	2 cut(s)	321, 351
Bsc4I	CCNNNNNNNGG	3 cut(s)	77, 966, 1447
Bse1I	ACTGG	2 cut(s)	186, 294
BseBI	CCWGG	4 cut(s)	202, 961, 1328, 1339
BseDI	CCNNGG	5 cut(s)	119, 960, 1030, 1338, 1563
BseGI	GGATG	5 cut(s)	411, 574, 869, 1619, 1705
BseLI	CCNNNNNNNGG	3 cut(s)	77, 966, 1447
BseMII	CTCAG	1 cut(s)	903
BseNI	ACTGG	2 cut(s)	186, 294
BseXI	GCAGC	3 cut(s)	451, 538, 1115
BseYI	CCCAGC	2 cut(s)	768, 924
BsgI	GTGCAG	2 cut(s)	545, 1250
Bsh1236I	CGCG	2 cut(s)	165, 1615
BshFI	GGCC	4 cut(s)	205, 868, 1238, 1451
BsiHKAI	GWGCWC	1 cut(s)	517
BsiHKCI	CYCGRG	1 cut(s)	1029
BsiSI	CCGG	4 cut(s)	406, 555, 849, 967
BslFI	GGGAC	5 cut(s)	85, 112, 154, 855, 977
BslI	CCNNNNNNNGG	3 cut(s)	77, 966, 1447
BsmAI	GTCTC	1 cut(s)	112
BsmFI	GGGAC	5 cut(s)	85, 112, 154, 855, 977
BsmI	GAATGC	1 cut(s)	54
BsnI	GGCC	4 cut(s)	205, 868, 1238, 1451
BsoBI	CYCGRG	1 cut(s)	1029
Bsp1286I	GDGCHC	1 cut(s)	517
Bsp1407I	TGTACA	1 cut(s)	621
Bsp143I	GATC	5 cut(s)	115, 143, 154, 1060, 1488
Bsp68I	TCGCGA	1 cut(s)	1615
BspACI	CCGC	4 cut(s)	77, 485, 766, 1638
BspANI	GGCC	4 cut(s)	205, 868, 1238, 1451
BspCNI	CTCAG	1 cut(s)	904
BspFNI	CGCG	2 cut(s)	165, 1615
BspLI	GGNNCC	5 cut(s)	19, 843, 844, 965, 1481
BspMAI	CTGCAG	1 cut(s)	1112
BspPI	GGATC	3 cut(s)	110, 1068, 1496
BspQI	GCTCTTC	1 cut(s)	1386
BsrBI	CCGCTC	2 cut(s)	77, 485
BsrGI	TGTACA	1 cut(s)	621
BsrI	ACTGG	2 cut(s)	186, 294
BssECI	CCNNGG	5 cut(s)	119, 960, 1030, 1338, 1563
BssMI	GATC	5 cut(s)	115, 143, 154, 1060, 1488
BssSI	CACGAG	1 cut(s)	72
Bst2BI	CACGAG	1 cut(s)	72
Bst2UI	CCWGG	4 cut(s)	202, 961, 1328, 1339
Bst4CI	ACNGT	5 cut(s)	99, 812, 1535, 1551, 1631
Bst6I	CTCTTC	3 cut(s)	115, 318, 1386
BstAPI	GCANNNNNTGC	1 cut(s)	717
BstAUI	TGTACA	1 cut(s)	621
BstC8I	GCNNGC	4 cut(s)	646, 898, 1108, 1617
BstDEI	CTNAG	2 cut(s)	498, 912
BstEII	GGTNACC	1 cut(s)	1646
BstF5I	GGATG	5 cut(s)	411, 574, 869, 1619, 1705
BstFNI	CGCG	2 cut(s)	165, 1615
BstHHI	GCGC	1 cut(s)	953
BstKTI	GATC	5 cut(s)	118, 146, 157, 1063, 1491
BstMAI	GTCTC	1 cut(s)	112
BstMBI	GATC	5 cut(s)	115, 143, 154, 1060, 1488
BstMWI	GCNNNNNNNGC	5 cut(s)	717, 1112, 1307, 1366, 1457
BstNI	CCWGG	4 cut(s)	202, 961, 1328, 1339
BstNSI	RCATGY	3 cut(s)	648, 724, 1424
BstPAI	GACNNNNGTC	1 cut(s)	166
BstPI	GGTNACC	1 cut(s)	1646
BstSCI	CCNGG	7 cut(s)	200, 405, 554, 959, 966, 1326, 1337
BstSFI	CTRYAG	1 cut(s)	1108
BstUI	CGCG	2 cut(s)	165, 1615
BstV1I	GCAGC	3 cut(s)	451, 538, 1115
BstV2I	GAAGAC	1 cut(s)	1029
BstX2I	RGATCY	2 cut(s)	115, 1060
BstXI	CCANNNNNNTGG	1 cut(s)	1631
BstYI	RGATCY	2 cut(s)	115, 1060
BsuRI	GGCC	4 cut(s)	205, 868, 1238, 1451
BtrI	CACGTC	1 cut(s)	62
BtsCI	GGATG	5 cut(s)	411, 574, 869, 1619, 1705
BtsI	GCAGTG	2 cut(s)	946, 1648
BtsIMutI	CAGTG	5 cut(s)	95, 301, 804, 946, 1648
BtuMI	TCGCGA	1 cut(s)	1615
Cac8I	GCNNGC	4 cut(s)	646, 898, 1108, 1617
CaiI	CAGNNNCTG	1 cut(s)	1430
CfoI	GCGC	1 cut(s)	953
Cfr13I	GGNCC	3 cut(s)	842, 866, 964
CseI	GACGC	1 cut(s)	171
Csp6I	GTAC	5 cut(s)	6, 622, 675, 1579, 1669
CviAII	CATG	6 cut(s)	645, 721, 838, 1013, 1421, 1682
CviQI	GTAC	5 cut(s)	6, 622, 675, 1579, 1669
DdeI	CTNAG	2 cut(s)	498, 912
DpnI	GATC	5 cut(s)	117, 145, 156, 1062, 1490
DpnII	GATC	5 cut(s)	115, 143, 154, 1060, 1488
DraIII	CACNNNGTG	1 cut(s)	523
Eam1104I	CTCTTC	3 cut(s)	115, 318, 1386
EarI	CTCTTC	3 cut(s)	115, 318, 1386
Eco32I	GATATC	1 cut(s)	309
Eco47I	GGWCC	2 cut(s)	842, 964
Eco57I	CTGAAG	2 cut(s)	96, 1242
Eco88I	CYCGRG	1 cut(s)	1029
Eco91I	GGTNACC	1 cut(s)	1646
EcoO109I	RGGNCCY	1 cut(s)	842
EcoO65I	GGTNACC	1 cut(s)	1646
EcoRII	CCWGG	4 cut(s)	200, 959, 1326, 1337
EcoRV	GATATC	1 cut(s)	309
EcoT22I	ATGCAT	2 cut(s)	363, 1683
FaeI	CATG	6 cut(s)	648, 724, 841, 1016, 1424, 1685
FalI	AAGNNNNNCTT	2 cut(s)	731, 763
FaqI	GGGAC	5 cut(s)	85, 112, 154, 855, 977
FatI	CATG	6 cut(s)	644, 720, 837, 1012, 1420, 1681
FauI	CCCGC	1 cut(s)	70
FbaI	TGATCA	1 cut(s)	154
FblI	GTMKAC	1 cut(s)	1097
Fnu4HI	GCNGC	5 cut(s)	440, 527, 766, 1104, 1639
FokI	GGATG	5 cut(s)	398, 561, 856, 1606, 1692
Fsp4HI	GCNGC	5 cut(s)	440, 527, 766, 1104, 1639
GlaI	GCGC	1 cut(s)	952
GluI	GCNGC	5 cut(s)	440, 527, 766, 1104, 1639
GsaI	CCCAGC	2 cut(s)	772, 928
GsuI	CTGGAG	4 cut(s)	348, 1310, 1418, 1466
HaeIII	GGCC	4 cut(s)	205, 868, 1238, 1451
HapII	CCGG	4 cut(s)	406, 555, 849, 967
HgaI	GACGC	1 cut(s)	171
HhaI	GCGC	1 cut(s)	953
Hin1II	CATG	6 cut(s)	648, 724, 841, 1016, 1424, 1685
Hin6I	GCGC	1 cut(s)	951
HinP1I	GCGC	1 cut(s)	951
HincII	GTYRAC	2 cut(s)	757, 1098
HindII	GTYRAC	2 cut(s)	757, 1098
HindIII	AAGCTT	2 cut(s)	467, 1358
HpaI	GTTAAC	1 cut(s)	757
HpaII	CCGG	4 cut(s)	406, 555, 849, 967
HphI	GGTGA	3 cut(s)	20, 356, 1658
Hpy166II	GTNNAC	6 cut(s)	434, 622, 757, 1085, 1098, 1181
Hpy188I	TCNGA	9 cut(s)	115, 154, 477, 874, 913, 978, 1507, 1516, 1715
Hpy188III	TCNNGA	9 cut(s)	45, 194, 317, 383, 821, 1163, 1293, 1483, 1614
Hpy8I	GTNNAC	6 cut(s)	434, 622, 757, 1085, 1098, 1181
Hpy99I	CGWCG	1 cut(s)	377
HpyAV	CCTTC	2 cut(s)	48, 1662
HpyCH4III	ACNGT	5 cut(s)	99, 812, 1535, 1551, 1631
HpyCH4IV	ACGT	1 cut(s)	61
HpyF10VI	GCNNNNNNNGC	5 cut(s)	717, 1112, 1307, 1366, 1457
HpyF3I	CTNAG	2 cut(s)	498, 912
HpySE526I	ACGT	1 cut(s)	61
Hsp92II	CATG	6 cut(s)	648, 724, 841, 1016, 1424, 1685
HspAI	GCGC	1 cut(s)	951
KflI	GGGWCCC	1 cut(s)	842
Ksp22I	TGATCA	1 cut(s)	154
KspAI	GTTAAC	1 cut(s)	757
Kzo9I	GATC	5 cut(s)	115, 143, 154, 1060, 1488
LguI	GCTCTTC	1 cut(s)	1386
LmnI	GCTCC	4 cut(s)	860, 958, 985, 1485
Lsp1109I	GCAGC	3 cut(s)	451, 538, 1115
LweI	GCATC	7 cut(s)	348, 370, 583, 620, 1297, 1628, 1680
MaeII	ACGT	1 cut(s)	61
MaeIII	GTNAC	4 cut(s)	734, 1313, 1535, 1646
MalI	GATC	5 cut(s)	117, 145, 156, 1062, 1490
MbiI	CCGCTC	2 cut(s)	77, 485
MboI	GATC	5 cut(s)	115, 143, 154, 1060, 1488
MflI	RGATCY	2 cut(s)	115, 1060
MhlI	GDGCHC	1 cut(s)	517
MluCI	AATT	6 cut(s)	148, 389, 450, 606, 1386, 1404
MlyI	GAGTC	4 cut(s)	176, 793, 1103, 1168
MmeI	TCCRAC	1 cut(s)	1465
Mph1103I	ATGCAT	2 cut(s)	363, 1683
MroXI	GAANNNNTTC	1 cut(s)	704
MseI	TTAA	5 cut(s)	491, 605, 756, 1541, 1596
MslI	CAYNNNNRTG	1 cut(s)	1017
MspA1I	CMGCKG	1 cut(s)	768
MspI	CCGG	4 cut(s)	406, 555, 849, 967
MspR9I	CCNGG	7 cut(s)	202, 407, 556, 961, 968, 1328, 1339
Mva1269I	GAATGC	1 cut(s)	54
MvaI	CCWGG	4 cut(s)	202, 961, 1328, 1339
MvnI	CGCG	2 cut(s)	165, 1615
MwoI	GCNNNNNNNGC	5 cut(s)	717, 1112, 1307, 1366, 1457
NciI	CCSGG	3 cut(s)	407, 556, 968
NdeII	GATC	5 cut(s)	115, 143, 154, 1060, 1488
NlaIII	CATG	6 cut(s)	648, 724, 841, 1016, 1424, 1685
NlaIV	GGNNCC	5 cut(s)	19, 843, 844, 965, 1481
NmeAIII	GCCGAG	2 cut(s)	100, 1588
NmuCI	GTSAC	2 cut(s)	1313, 1646
NruI	TCGCGA	1 cut(s)	1615
NsiI	ATGCAT	2 cut(s)	363, 1683
NspI	RCATGY	3 cut(s)	648, 724, 1424
PaeI	GCATGC	1 cut(s)	648
PciSI	GCTCTTC	1 cut(s)	1386
PctI	GAATGC	1 cut(s)	54
PdmI	GAANNNNTTC	1 cut(s)	704
PfeI	GAWTC	7 cut(s)	559, 658, 817, 971, 1148, 1215, 1381
PfoI	TCCNGGA	1 cut(s)	1326
PkrI	GCNGC	5 cut(s)	441, 528, 767, 1105, 1640
PleI	GAGTC	4 cut(s)	175, 793, 1102, 1167
PpsI	GAGTC	4 cut(s)	175, 793, 1102, 1167
PpuMI	RGGWCCY	1 cut(s)	842
PshAI	GACNNNNGTC	1 cut(s)	166
Psp5II	RGGWCCY	1 cut(s)	842
Psp6I	CCWGG	4 cut(s)	200, 959, 1326, 1337
PspEI	GGTNACC	1 cut(s)	1646
PspFI	CCCAGC	2 cut(s)	768, 924
PspGI	CCWGG	4 cut(s)	200, 959, 1326, 1337
PspN4I	GGNNCC	5 cut(s)	19, 843, 844, 965, 1481
PspPI	GGNCC	3 cut(s)	842, 866, 964
PspPPI	RGGWCCY	1 cut(s)	842
PstI	CTGCAG	1 cut(s)	1112
PstNI	CAGNNNCTG	1 cut(s)	1430
PsuI	RGATCY	2 cut(s)	115, 1060
RruI	TCGCGA	1 cut(s)	1615
RsaI	GTAC	5 cut(s)	7, 623, 676, 1580, 1670
RsaNI	GTAC	5 cut(s)	6, 622, 675, 1579, 1669
RseI	CAYNNNNRTG	1 cut(s)	1017
SalI	GTCGAC	1 cut(s)	1096
SapI	GCTCTTC	1 cut(s)	1386
SaqAI	TTAA	5 cut(s)	491, 605, 756, 1541, 1596
SatI	GCNGC	5 cut(s)	440, 527, 766, 1104, 1639
Sau3AI	GATC	5 cut(s)	115, 143, 154, 1060, 1488
Sau96I	GGNCC	3 cut(s)	842, 866, 964
SchI	GAGTC	4 cut(s)	176, 793, 1103, 1168
ScrFI	CCNGG	7 cut(s)	202, 407, 556, 961, 968, 1328, 1339
SduI	GDGCHC	1 cut(s)	517
SfaNI	GCATC	7 cut(s)	348, 370, 583, 620, 1297, 1628, 1680
SfcI	CTRYAG	1 cut(s)	1108
SinI	GGWCC	2 cut(s)	842, 964
SmiMI	CAYNNNNRTG	1 cut(s)	1017
SmlI	CTYRAG	4 cut(s)	192, 1139, 1361, 1445
SmoI	CTYRAG	4 cut(s)	192, 1139, 1361, 1445
SphI	GCATGC	1 cut(s)	648
Sse9I	AATT	6 cut(s)	148, 389, 450, 606, 1386, 1404
SsiI	CCGC	4 cut(s)	77, 485, 766, 1638
SspI	AATATT	1 cut(s)	1119
StyD4I	CCNGG	7 cut(s)	200, 405, 554, 959, 966, 1326, 1337
TaaI	ACNGT	5 cut(s)	99, 812, 1535, 1551, 1631
TaiI	ACGT	1 cut(s)	64
TaqI	TCGA	8 cut(s)	316, 417, 744, 892, 904, 1097, 1213, 1673
TasI	AATT	6 cut(s)	148, 389, 450, 606, 1386, 1404
TatI	WGTACW	2 cut(s)	621, 1668
TauI	GCSGC	2 cut(s)	768, 1641
TfiI	GAWTC	7 cut(s)	559, 658, 817, 971, 1148, 1215, 1381
Tru1I	TTAA	5 cut(s)	491, 605, 756, 1541, 1596
Tru9I	TTAA	5 cut(s)	491, 605, 756, 1541, 1596
TscAI	CASTG	5 cut(s)	102, 301, 811, 953, 1648
TseFI	GTSAC	2 cut(s)	1313, 1646
TseI	GCWGC	3 cut(s)	439, 526, 1103
Tsp45I	GTSAC	2 cut(s)	1313, 1646
TspDTI	ATGAA	2 cut(s)	30, 1001
TspRI	CASTG	5 cut(s)	102, 301, 811, 953, 1648
VpaK11BI	GGWCC	2 cut(s)	842, 964
XapI	RAATTY	2 cut(s)	148, 450
XceI	RCATGY	3 cut(s)	648, 724, 1424
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1246, 1631
XmiI	GTMKAC	1 cut(s)	1097
XmnI	GAANNNNTTC	1 cut(s)	704
Zsp2I	ATGCAT	2 cut(s)	363, 1683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.