Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0007399

Physical Location & Seq

Genomic Coordinates Reverse (-)

3433475 .. 3436874

Gene Structure 3400 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g04640.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGAGAAGGGAAATGCCCCTAGACCACGTTACATTTATTTATCTTTACCTAAAATTTATATTTTATTCCATATATATAGGCTATGTACAAAAGTCAAGGTAAAATCGGAAAACAACGCCTTACAGGAGACGAATAATAAACTTCCACAAATCTGTCTCTCCGCGTCGCTGATCTTTGTCCTCTCTACTGGGCAGCTGAATCTTCTCTCCGGCTTCGTCTGGGTGGTACTTCTTTTGCCACAGTCGTATATAAGGGGGAACTGGTGGATGGGTACATCATCTGGTTCCAATATACACCAACAGCCTTCATCAAGAATGCTTCCTCCACGTCAGCAACCACGAGCAGGGGGACTACAAACCTCACTGTCCCTTGTATCTTCAGATCCTCGGCTTTCCCCAGAAGAACCCAGATCAAATTCTGATCATAGACGTGAGTCCCCTACCGAGAGTGCCAGTTCTCGAGAAACCTGGCCTACTGCTGATGCCATAATGGCAAAGAAGATGGAAAATGGGAAAGCAGAAAATGATTGCCCTGAACAATCGGTTATTCGCCGTGTTTCCAGTGCTGATAAGATATCTCTTCGAGATATAGCAAGAGAGCGAGTTGATATAATCACTGAAAAGATGCATCACCTACCTGATGAGTTTCATGAAGAATTGAAGAACAACCTCCGAGTCATCCTTGATGGAAATGGTGGTTCGCAGCAGAGAGAAGAATTTTTTGTTTTGCAGAAACTTGTTCAGAGTAGAGCAGACTTAACGGCTAAGACATTGATCAGAGCACACAGAGTGCAGCTTGAAATCCTTGTTGCAATAAATACTGGGATTCTGGCATTCTTACATCCAAATATCAGTCTCTCTCAAACTTCCTTAATTGAAGTTTTCATGTACAAGAGATGCAGAAATATAGCATGCCAAAACCAGATTCCAGCTGATGATTGTACCTGTGAGATATGTACGAAAAGAAATGGTTTCTGTAATCTTTGCATGTGTGTAATATGTAACAAGTTCGATTTTGAAGTGAACACTTGCCGTTGGGTTGGTTGTGATTTGTGTTCACATTGGACTCACACTGACTGTGCTATTCGTGATGGTCTAATAAGCATGGGAGCTTCTGGTAAGAGCGGAGCAGGGCCCTCCGAAATGCTTTTCAGGTGTCGAGCTTGCAGTCGAACATCTGAGCTATTGGGCTGGGTCAAAGATGTTTTTCAACACTGTGCTCCTGCCTGGGATCGGGAGGCTCTGACAAGGGAGCTTGATTTTGTTAGTAGGATTTTTCATGGGAGCAAAGACACCCGAGGGCAAAAACTCTTTTGGAAGTGTGAGCATCTCAAGGAAAAAATAAAAAGTAGACTTGCAGAATCAACAGAAGCCTGCAGAGCAATATTGATGTTTTTCCAAGAGCTTGAGGGAGACTCTCCAAAGAGCCTGGAAAACGGGGAAAGTGGACGGCTAATAGCACCACAGGAGGCTTGTAATCAAATCGCTGAAGTGGTGCAGGAGGCCATAAGGAAGATGGAAATGGTTGCTGATGAGAAGATGAGAATGTATAAGAAATCCCGAATGGCTGTTGAGGCTTGTGACAGGGAACTCCAGGACAAGGCCAGAGAAGTTCAAGAGCTAAAGCTTGAGAGGCAAAAAAAGAAGAGTCAAATTGAAGAGCTGGAGAAAATTGTGCGGCTCAAACATGCAGAGGCTGATATGTTCCAACTCAAGGCCAATGAGGCAAAACGAGAGGCTGACAGGCTTCAGAGGATCGCTCTTGCCAAGTCAGATAAATCAGAGGAAGAATATGCCAACAGTTACTTAAAGCAACGGTTGAGTGAAGCCGAGGCTGAAAAGCAGTATCTTTTTGAGAAGATGAAACTGCAAGAGAGTTCGCGGGCATCCCAGAACAGTGGCGGCGGCGGTAGCGACCCTTCTCAGTTGCTGTTGTACTCGAAAATGCATGACATGATGCCAAACGAACGCCATCCTTTCAGAAAAAATCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006810 GO:0007275 GO:0008150 GO:0009536 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0010014 GO:0010015 GO:0010071 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010468 GO:0010492 GO:0016032 GO:0019222 GO:0019827 GO:0022414 GO:0022622 GO:0031347 GO:0032501 GO:0032502 GO:0040011 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044000 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044766 GO:0046739 GO:0046740 GO:0046794 GO:0046982 GO:0046983 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051701 GO:0051704 GO:0051814 GO:0052126 GO:0052192 GO:0060255 GO:0061458 GO:0065007 GO:0080022 GO:0080134 GO:0090421 GO:0098727 GO:0099402 GO:1902579 GO:1902586 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oberon_cc PHD_Oberon

Protein Analysis

665

Amino Acids

75.78

Weight (kDa)

8.62

Isoelectric Point (pI)

56.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48160 AT5G48160
fragaria_vesca	FvH4_6g41110 FvH4_6g41110
malus_domestica	MD09G1122100.v1.1 MD17G1113100.v1.1
prunus_persica	Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1
pyrus_communis	pycom09g04640 pycom17g10470
rosa_chinensis	RchiOBHm_Chr2g0156671
rosa_laevigata	RLG00000020930
rosa_multiflora	Rmu_sc0001130.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092850
rosa_rugosa	Rorug02G0455400
rosa_samantha	Rh2AG520900 Rh2BG534100 Rh2CG505900 Rh2DG542900
rosa_wichuraiana	Rw0G013730 Rw2G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1125
AccI	GTMKAC	1 cut(s)	1351
AccII	CGCG	2 cut(s)	164, 1882
AciI	CCGC	7 cut(s)	162, 1125, 1678, 1882, 1902, 1905, 1908
AclWI	GGATC	3 cut(s)	377, 1239, 1763
AcsI	RAATTY	3 cut(s)	54, 415, 716
AcuI	CTGAAG	3 cut(s)	363, 1509, 1733
AdeI	CACNNNGTG	1 cut(s)	790
AfaI	GTAC	7 cut(s)	88, 228, 274, 890, 943, 958, 1937
AfiI	CCNNNNNNNGG	4 cut(s)	344, 1233, 1600, 1714
AgsI	TTSAA	7 cut(s)	661, 800, 878, 1019, 1211, 1616, 1658
AjiI	CACGTC	2 cut(s)	329, 431
AjnI	CCWGG	4 cut(s)	467, 1226, 1428, 1593
AjuI	GAANNNNNNNTTGG	2 cut(s)	909, 941
Alw21I	GWGCWC	2 cut(s)	784, 1222
Alw26I	GTCTC	4 cut(s)	122, 161, 860, 1407
AlwI	GGATC	3 cut(s)	377, 1239, 1763
AlwNI	CAGNNNCTG	2 cut(s)	1697, 1930
Ama87I	CYCGRG	2 cut(s)	459, 1296
AoxI	GGCC	5 cut(s)	470, 1133, 1503, 1602, 1716
ApaI	GGGCCC	1 cut(s)	1137
ApeKI	GCWGC	3 cut(s)	193, 703, 793
ApoI	RAATTY	3 cut(s)	54, 415, 716
AspS9I	GGNCC	2 cut(s)	1133, 1134
AsuHPI	GGTGA	1 cut(s)	623
AvaI	CYCGRG	2 cut(s)	459, 1296
BaeGI	GKGCMC	1 cut(s)	1137
BanII	GRGCYC	1 cut(s)	1137
BarI	GAAGNNNNNNTAC	2 cut(s)	1903, 1935
BauI	CACGAG	1 cut(s)	339
Bbv12I	GWGCWC	2 cut(s)	784, 1222
BbvI	GCAGC	3 cut(s)	205, 715, 805
BccI	CCATC	6 cut(s)	262, 496, 680, 1085, 1510, 1980
BceAI	ACGGC	4 cut(s)	537, 777, 1017, 1466
BciT130I	CCWGG	4 cut(s)	469, 1228, 1430, 1595
BclI	TGATCA	2 cut(s)	421, 774
BcoDI	GTCTC	4 cut(s)	122, 161, 860, 1407
BfaI	CTAG	1 cut(s)	21
BfmI	CTRYAG	1 cut(s)	1375
BglI	GCCNNNNNGGC	2 cut(s)	491, 1724
BisI	GCNGC	6 cut(s)	194, 704, 794, 1679, 1903, 1906
BlsI	GCNGC	6 cut(s)	195, 705, 795, 1680, 1904, 1907
Bme1390I	CCNGG	4 cut(s)	469, 1228, 1430, 1595
BmeT110I	CYCGRG	2 cut(s)	459, 1296
BmgBI	CACGTC	2 cut(s)	329, 431
BmgT120I	GGNCC	2 cut(s)	1133, 1134
BmiI	GGNNCC	2 cut(s)	286, 1135
BmrFI	CCNGG	4 cut(s)	469, 1228, 1430, 1595
BmrI	ACTGGG	2 cut(s)	198, 831
BmsI	GCATC	7 cut(s)	472, 615, 637, 887, 1336, 1895, 1947
BmuI	ACTGGG	2 cut(s)	198, 831
BoxI	GACNNNNGTC	1 cut(s)	433
BplI	GAGNNNNNCTC	4 cut(s)	1400, 1432, 1744, 1776
BpmI	CTGGAG	2 cut(s)	1577, 1685
BpuEI	CTTGAG	4 cut(s)	1316, 1427, 1649, 1697
BsaJI	CCNNGG	4 cut(s)	386, 1227, 1297, 1830
Bsc4I	CCNNNNNNNGG	4 cut(s)	344, 1233, 1600, 1714
Bse1I	ACTGG	5 cut(s)	193, 266, 453, 561, 826
BseBI	CCWGG	4 cut(s)	469, 1228, 1430, 1595
BseDI	CCNNGG	4 cut(s)	386, 1227, 1297, 1830
BseGI	GGATG	5 cut(s)	273, 678, 841, 1886, 1972
BseLI	CCNNNNNNNGG	4 cut(s)	344, 1233, 1600, 1714
BseMII	CTCAG	2 cut(s)	1170, 1937
BseNI	ACTGG	5 cut(s)	193, 266, 453, 561, 826
BseSI	GKGCMC	1 cut(s)	1137
BseXI	GCAGC	3 cut(s)	205, 715, 805
BseYI	CCCAGC	1 cut(s)	1191
BsgI	GTGCAG	2 cut(s)	812, 1517
Bsh1236I	CGCG	2 cut(s)	164, 1882
BshFI	GGCC	5 cut(s)	472, 1135, 1505, 1604, 1718
BsiHKAI	GWGCWC	2 cut(s)	784, 1222
BsiHKCI	CYCGRG	2 cut(s)	459, 1296
BsiSI	CCGG	1 cut(s)	210
BslFI	GGGAC	3 cut(s)	352, 363, 421
BslI	CCNNNNNNNGG	4 cut(s)	344, 1233, 1600, 1714
BsmAI	GTCTC	4 cut(s)	122, 161, 860, 1407
BsmBI	CGTCTC	1 cut(s)	122
BsmFI	GGGAC	3 cut(s)	352, 363, 421
BsmI	GAATGC	2 cut(s)	321, 833
BsnI	GGCC	5 cut(s)	472, 1135, 1505, 1604, 1718
BsoBI	CYCGRG	2 cut(s)	459, 1296
Bsp120I	GGGCCC	1 cut(s)	1133
Bsp1286I	GDGCHC	3 cut(s)	784, 1137, 1222
Bsp1407I	TGTACA	2 cut(s)	86, 888
Bsp143I	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
BspACI	CCGC	7 cut(s)	162, 1125, 1678, 1882, 1902, 1905, 1908
BspANI	GGCC	5 cut(s)	472, 1135, 1505, 1604, 1718
BspCNI	CTCAG	2 cut(s)	1171, 1936
BspFNI	CGCG	2 cut(s)	164, 1882
BspHI	TCATGA	1 cut(s)	649
BspLI	GGNNCC	2 cut(s)	286, 1135
BspMAI	CTGCAG	1 cut(s)	1379
BspPI	GGATC	3 cut(s)	377, 1239, 1763
BspQI	GCTCTTC	1 cut(s)	1653
BsrBI	CCGCTC	1 cut(s)	1125
BsrGI	TGTACA	2 cut(s)	86, 888
BsrI	ACTGG	5 cut(s)	193, 266, 453, 561, 826
BssECI	CCNNGG	4 cut(s)	386, 1227, 1297, 1830
BssMI	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
BssSI	CACGAG	1 cut(s)	339
Bst2BI	CACGAG	1 cut(s)	339
Bst2UI	CCWGG	4 cut(s)	469, 1228, 1430, 1595
Bst4CI	ACNGT	7 cut(s)	243, 366, 1079, 1217, 1802, 1818, 1898
Bst6I	CTCTTC	3 cut(s)	585, 1640, 1653
BstAUI	TGTACA	2 cut(s)	86, 888
BstC8I	GCNNGC	4 cut(s)	913, 1165, 1375, 1884
BstDEI	CTNAG	3 cut(s)	765, 1179, 1923
BstF5I	GGATG	5 cut(s)	273, 678, 841, 1886, 1972
BstFNI	CGCG	2 cut(s)	164, 1882
BstKTI	GATC	7 cut(s)	174, 385, 413, 424, 777, 1234, 1758
BstMAI	GTCTC	4 cut(s)	122, 161, 860, 1407
BstMBI	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
BstMWI	GCNNNNNNNGC	6 cut(s)	491, 1379, 1574, 1633, 1724, 1911
BstNI	CCWGG	4 cut(s)	469, 1228, 1430, 1595
BstNSI	RCATGY	3 cut(s)	915, 991, 1691
BstPAI	GACNNNNGTC	1 cut(s)	433
BstSCI	CCNGG	4 cut(s)	467, 1226, 1428, 1593
BstSFI	CTRYAG	1 cut(s)	1375
BstSLI	GKGCMC	1 cut(s)	1137
BstUI	CGCG	2 cut(s)	164, 1882
BstV1I	GCAGC	3 cut(s)	205, 715, 805
BstX2I	RGATCY	1 cut(s)	382
BstXI	CCANNNNNNTGG	1 cut(s)	1898
BstYI	RGATCY	1 cut(s)	382
BsuRI	GGCC	5 cut(s)	472, 1135, 1505, 1604, 1718
BtrI	CACGTC	2 cut(s)	329, 431
BtsCI	GGATG	5 cut(s)	273, 678, 841, 1886, 1972
BtsIMutI	CAGTG	6 cut(s)	362, 568, 615, 1071, 1213, 1903
Cac8I	GCNNGC	4 cut(s)	913, 1165, 1375, 1884
CaiI	CAGNNNCTG	2 cut(s)	1697, 1930
CciI	TCATGA	1 cut(s)	649
Cfr13I	GGNCC	2 cut(s)	1133, 1134
CseI	GACGC	1 cut(s)	153
Csp6I	GTAC	7 cut(s)	87, 227, 273, 889, 942, 957, 1936
CviAII	CATG	9 cut(s)	650, 886, 912, 988, 1105, 1280, 1688, 1949, 1954
CviQI	GTAC	7 cut(s)	87, 227, 273, 889, 942, 957, 1936
DdeI	CTNAG	3 cut(s)	765, 1179, 1923
DpnI	GATC	7 cut(s)	173, 384, 412, 423, 776, 1233, 1757
DpnII	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
DraIII	CACNNNGTG	1 cut(s)	790
Eam1104I	CTCTTC	3 cut(s)	585, 1640, 1653
EarI	CTCTTC	3 cut(s)	585, 1640, 1653
Eco24I	GRGCYC	1 cut(s)	1137
Eco32I	GATATC	1 cut(s)	576
Eco57I	CTGAAG	3 cut(s)	363, 1509, 1733
Eco88I	CYCGRG	2 cut(s)	459, 1296
EcoO109I	RGGNCCY	2 cut(s)	1133, 1134
EcoRII	CCWGG	4 cut(s)	467, 1226, 1428, 1593
EcoRV	GATATC	1 cut(s)	576
EcoT22I	ATGCAT	2 cut(s)	630, 1950
EcoT38I	GRGCYC	1 cut(s)	1137
Esp3I	CGTCTC	1 cut(s)	122
FaeI	CATG	9 cut(s)	653, 889, 915, 991, 1108, 1283, 1691, 1952, 1957
FaqI	GGGAC	3 cut(s)	352, 363, 421
FatI	CATG	9 cut(s)	649, 885, 911, 987, 1104, 1279, 1687, 1948, 1953
FauI	CCCGC	1 cut(s)	1875
FbaI	TGATCA	2 cut(s)	421, 774
FblI	GTMKAC	1 cut(s)	1351
Fnu4HI	GCNGC	6 cut(s)	194, 704, 794, 1679, 1903, 1906
FokI	GGATG	5 cut(s)	280, 665, 828, 1873, 1959
FriOI	GRGCYC	1 cut(s)	1137
Fsp4HI	GCNGC	6 cut(s)	194, 704, 794, 1679, 1903, 1906
FspBI	CTAG	1 cut(s)	21
GluI	GCNGC	6 cut(s)	194, 704, 794, 1679, 1903, 1906
GsaI	CCCAGC	1 cut(s)	1195
GsuI	CTGGAG	2 cut(s)	1577, 1685
HaeIII	GGCC	5 cut(s)	472, 1135, 1505, 1604, 1718
HapII	CCGG	1 cut(s)	210
HgaI	GACGC	1 cut(s)	153
Hin1II	CATG	9 cut(s)	653, 889, 915, 991, 1108, 1283, 1691, 1952, 1957
HindIII	AAGCTT	1 cut(s)	1625
HinfI	GANTC	9 cut(s)	199, 434, 675, 826, 925, 1066, 1361, 1415, 1648
HpaII	CCGG	1 cut(s)	210
HphI	GGTGA	1 cut(s)	623
Hpy166II	GTNNAC	4 cut(s)	1024, 1058, 1352, 1448
Hpy188III	TCNNGA	9 cut(s)	312, 459, 461, 584, 650, 1088, 1235, 1560, 1616
Hpy8I	GTNNAC	4 cut(s)	1024, 1058, 1352, 1448
Hpy99I	CGWCG	1 cut(s)	169
HpyAV	CCTTC	2 cut(s)	315, 1929
HpyCH4III	ACNGT	7 cut(s)	243, 366, 1079, 1217, 1802, 1818, 1898
HpyCH4IV	ACGT	3 cut(s)	28, 328, 430
HpyF10VI	GCNNNNNNNGC	6 cut(s)	491, 1379, 1574, 1633, 1724, 1911
HpyF3I	CTNAG	3 cut(s)	765, 1179, 1923
HpySE526I	ACGT	3 cut(s)	28, 328, 430
Hsp92II	CATG	9 cut(s)	653, 889, 915, 991, 1108, 1283, 1691, 1952, 1957
Ksp22I	TGATCA	2 cut(s)	421, 774
Kzo9I	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
LguI	GCTCTTC	1 cut(s)	1653
LmnI	GCTCC	5 cut(s)	1109, 1127, 1225, 1252, 1284
Lsp1109I	GCAGC	3 cut(s)	205, 715, 805
LweI	GCATC	7 cut(s)	472, 615, 637, 887, 1336, 1895, 1947
MaeI	CTAG	1 cut(s)	21
MaeII	ACGT	3 cut(s)	28, 328, 430
MaeIII	GTNAC	4 cut(s)	29, 1001, 1580, 1802
MalI	GATC	7 cut(s)	173, 384, 412, 423, 776, 1233, 1757
MbiI	CCGCTC	1 cut(s)	1125
MboI	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
MflI	RGATCY	1 cut(s)	382
MhlI	GDGCHC	3 cut(s)	784, 1137, 1222
MluCI	AATT	7 cut(s)	54, 415, 656, 716, 873, 1653, 1671
MlyI	GAGTC	5 cut(s)	443, 684, 1060, 1409, 1657
MmeI	TCCRAC	1 cut(s)	1732
Mph1103I	ATGCAT	2 cut(s)	630, 1950
MseI	TTAA	3 cut(s)	758, 872, 1808
MslI	CAYNNNNRTG	1 cut(s)	429
MspA1I	CMGCKG	2 cut(s)	196, 932
MspI	CCGG	1 cut(s)	210
MspR9I	CCNGG	4 cut(s)	469, 1228, 1430, 1595
Mva1269I	GAATGC	2 cut(s)	321, 833
MvaI	CCWGG	4 cut(s)	469, 1228, 1430, 1595
MvnI	CGCG	2 cut(s)	164, 1882
MwoI	GCNNNNNNNGC	6 cut(s)	491, 1379, 1574, 1633, 1724, 1911
NdeII	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
NlaIII	CATG	9 cut(s)	653, 889, 915, 991, 1108, 1283, 1691, 1952, 1957
NlaIV	GGNNCC	2 cut(s)	286, 1135
NmeAIII	GCCGAG	2 cut(s)	367, 1855
NmuCI	GTSAC	1 cut(s)	1580
NsiI	ATGCAT	2 cut(s)	630, 1950
NspI	RCATGY	3 cut(s)	915, 991, 1691
PaeI	GCATGC	1 cut(s)	915
PaeR7I	CTCGAG	1 cut(s)	459
PagI	TCATGA	1 cut(s)	649
PciSI	GCTCTTC	1 cut(s)	1653
PctI	GAATGC	2 cut(s)	321, 833
PfeI	GAWTC	4 cut(s)	199, 826, 925, 1361
PfoI	TCCNGGA	1 cut(s)	1593
PkrI	GCNGC	6 cut(s)	195, 705, 795, 1680, 1904, 1907
PleI	GAGTC	5 cut(s)	442, 683, 1060, 1409, 1656
PpsI	GAGTC	5 cut(s)	442, 683, 1060, 1409, 1656
PshAI	GACNNNNGTC	1 cut(s)	433
Psp6I	CCWGG	4 cut(s)	467, 1226, 1428, 1593
PspFI	CCCAGC	1 cut(s)	1191
PspGI	CCWGG	4 cut(s)	467, 1226, 1428, 1593
PspN4I	GGNNCC	2 cut(s)	286, 1135
PspOMI	GGGCCC	1 cut(s)	1133
PspPI	GGNCC	2 cut(s)	1133, 1134
PstI	CTGCAG	1 cut(s)	1379
PstNI	CAGNNNCTG	2 cut(s)	1697, 1930
PsuI	RGATCY	1 cut(s)	382
PvuII	CAGCTG	2 cut(s)	196, 932
RsaI	GTAC	7 cut(s)	88, 228, 274, 890, 943, 958, 1937
RsaNI	GTAC	7 cut(s)	87, 227, 273, 889, 942, 957, 1936
RseI	CAYNNNNRTG	1 cut(s)	429
SapI	GCTCTTC	1 cut(s)	1653
SaqAI	TTAA	3 cut(s)	758, 872, 1808
SatI	GCNGC	6 cut(s)	194, 704, 794, 1679, 1903, 1906
Sau3AI	GATC	7 cut(s)	171, 382, 410, 421, 774, 1231, 1755
Sau96I	GGNCC	2 cut(s)	1133, 1134
SchI	GAGTC	5 cut(s)	443, 684, 1060, 1409, 1657
ScrFI	CCNGG	4 cut(s)	469, 1228, 1430, 1595
SduI	GDGCHC	3 cut(s)	784, 1137, 1222
SfaNI	GCATC	7 cut(s)	472, 615, 637, 887, 1336, 1895, 1947
SfcI	CTRYAG	1 cut(s)	1375
Sfr274I	CTCGAG	1 cut(s)	459
SlaI	CTCGAG	1 cut(s)	459
SmiMI	CAYNNNNRTG	1 cut(s)	429
SmlI	CTYRAG	5 cut(s)	459, 1331, 1406, 1628, 1712
SmoI	CTYRAG	5 cut(s)	459, 1331, 1406, 1628, 1712
SphI	GCATGC	1 cut(s)	915
Sse9I	AATT	7 cut(s)	54, 415, 656, 716, 873, 1653, 1671
SsiI	CCGC	7 cut(s)	162, 1125, 1678, 1882, 1902, 1905, 1908
SspI	AATATT	1 cut(s)	1386
SspMI	CTAG	1 cut(s)	21
StyD4I	CCNGG	4 cut(s)	467, 1226, 1428, 1593
TaaI	ACNGT	7 cut(s)	243, 366, 1079, 1217, 1802, 1818, 1898
TaiI	ACGT	3 cut(s)	31, 331, 433
TaqI	TCGA	6 cut(s)	460, 583, 1011, 1159, 1171, 1940
TasI	AATT	7 cut(s)	54, 415, 656, 716, 873, 1653, 1671
TatI	WGTACW	3 cut(s)	86, 888, 1935
TauI	GCSGC	3 cut(s)	1681, 1905, 1908
TfiI	GAWTC	4 cut(s)	199, 826, 925, 1361
Tru1I	TTAA	3 cut(s)	758, 872, 1808
Tru9I	TTAA	3 cut(s)	758, 872, 1808
TscAI	CASTG	6 cut(s)	369, 568, 622, 1078, 1220, 1903
TseFI	GTSAC	1 cut(s)	1580
TseI	GCWGC	3 cut(s)	193, 703, 793
Tsp45I	GTSAC	1 cut(s)	1580
TspDTI	ATGAA	6 cut(s)	297, 638, 666, 874, 1268, 1877
TspRI	CASTG	6 cut(s)	369, 568, 622, 1078, 1220, 1903
XapI	RAATTY	3 cut(s)	54, 415, 716
XceI	RCATGY	3 cut(s)	915, 991, 1691
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1513
XhoI	CTCGAG	1 cut(s)	459
XmiI	GTMKAC	1 cut(s)	1351
XspI	CTAG	1 cut(s)	21
Zsp2I	ATGCAT	2 cut(s)	630, 1950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.