Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0007399

Physical Location & Seq

Genomic Coordinates Forward (+)

32420265 .. 32424202

Gene Structure 3938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g41110.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGGTACATCATCTGGTTCCAATATAAACCAACAACCTTCATCGAGAATGCTTCCTCCACGTCAGCAACCACGAGCTGGGGGACTACAGACATCACTATCACTTGTCTCTTCAGATGCTCGGCTGTCCCCTGAAGAACCCAGGTCAAATTCCGATCACGTACATGAGTCCCCAACTGAGAGTGCTAGTTCTCGAGAAACTTGGCCTACTGCAGAGGCTATAATGGCTAAGAAGATGGAGAATGGAAAAGTAGAAAATGATTTTCCTGAACAATCGGTCATTCGGCGTCTTTCCAGTGCTGATAAGATATCTCTTCGGGACATAGCAAGAGATAGAGTTGATATAGTCTGTGAGAAGATGAATCACCTACCTGATGAGTTTCTTGAAGAATTGAAGAACAACCTGAGAGTCATCCTTGATGGGAATGGTGGTTCGCAGCAAAGGGAGGAATTTTTTATTTTGCAAAAGCTTGTTCAGAGTAGAACTGATTTAACTGCTAAGACATTGATTAGGGCACATCGAGTACAGCTTGAAATTCTTGTTGCTATTAATACTGGGATTCTGGCATTCTTGCATCCGAATATCAGTCTGTCGCAAACTTCCCTTATTGAAGTTTTTGTGTACAAGAGATGCAGAAATATAGCATGCCAAAACCAGATTCCAGCTGATGATTGCACCTGTGAGATATGCACCAAAAGAAATGGTTTCTGCAACCTTTGTATGTGTGTAATCTGTAACAAGTTTGATTTTGAAGTGAACACTTGCCGTTGGGTTGGTTGTGATTTGTGTTCTCATTGGACTCACACTGACTGTGCGATCCGTGATGGTTTGATCAGCATGGGTGTTTCTGTTAAGAGTGGAGCAGGGCCAACAGAAATGCTTTTTAGGTGCCGAGCTTGCAATAGGACATCTGAACTACTGGGTTGGGTCAAAGATGTGTTTCAACACTGCGCACCTGCTTGGGAAAGGGAGGCATTGATGAGGGAGCTTGATTTTGTTAGTAGGATTTTTCATGGAAGTGAAGATCCTCGAGGGCAAAAACTCTTCTGGAAATGTGAGGAACTTAAAGAAAAGATAAAGAATGGAGTTGCAGATTCAACAGCCACTTGCAGAGCAATATTGATTTTCTTCCAAGAGCTAGAAGTAGACTCTCCAAAGAGCCTGGAAAATGGGGAAGGTGGACGGCTGATAGCGCCACAGGAGGCTTGTAACCGAATTGCTGAAGTGGTACAGGAGGCCATAAGGAAAATGGAAATGGTGGCTGATGAGAAGATGAGAATGTACAAGAAAGCCCGAATGGCTGTAGAGGCTTGTGATAGGGAACTCCAGGACAAGGCCAGGGAAGTTCAAGAACTAAAGCTTGAGAGGCAAAAAAAGAAGCAACAAGTTGAAGAGCTGGAGAAAATTGTGAGGCTAAAAAACGCAGAGGCTGATATGTTTCAACTCAAGGCCAATGAGGCTAAACGAGAGGCTGACAGGCTCCAGAGGATTGCTCTTGCCAAGTCAGATAAATCGGAGGAAGAATATGCTACTAGTTACTTGAAACAACGATTGAGTGAAGCTGAGGCTGAGAAGCAATATCTGTTTGAGAAGATCAAACTCCAAGAAAGTTCCCGGTCATCTCAGAACAGTGGTGGTAGTATTGACCCTTCTCAGATGCTGATGTATTCGAAAATGCATGATCTGCTTTACAGTGGTGCTCCGAAGACGGACTGCCTGCCAAATGAACGCCATCCTTTCAGAAAAAATCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006810 GO:0007275 GO:0008150 GO:0009536 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0010014 GO:0010015 GO:0010071 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010468 GO:0010492 GO:0016032 GO:0019222 GO:0019827 GO:0022414 GO:0022622 GO:0031347 GO:0032501 GO:0032502 GO:0040011 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044000 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0044766 GO:0046739 GO:0046740 GO:0046794 GO:0046982 GO:0046983 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051701 GO:0051704 GO:0051814 GO:0052126 GO:0052192 GO:0060255 GO:0061458 GO:0065007 GO:0080022 GO:0080134 GO:0090421 GO:0098727 GO:0099402 GO:1902579 GO:1902586 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oberon_cc PHD_Oberon

Protein Analysis

585

Amino Acids

66.44

Weight (kDa)

6.84

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	211 - 334	1.6e-42	PHD - plant homeodomain finger protein
Oberon_cc	PF16312	429 - 563	2.8e-51	Coiled-coil region of Oberon

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48160 AT5G48160
fragaria_vesca	FvH4_6g41110 FvH4_6g41110
malus_domestica	MD09G1122100.v1.1 MD17G1113100.v1.1
prunus_persica	Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1 Prupe.3G201500_v2.0.a1
pyrus_communis	pycom09g04640 pycom17g10470
rosa_chinensis	RchiOBHm_Chr2g0156671
rosa_laevigata	RLG00000020930
rosa_multiflora	Rmu_sc0001130.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092850
rosa_rugosa	Rorug02G0455400
rosa_samantha	Rh2AG520900 Rh2BG534100 Rh2CG505900 Rh2DG542900
rosa_wichuraiana	Rw0G013730 Rw2G042980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	964
AbsI	CCTCGAGG	1 cut(s)	1029
Acc16I	TGCGCA	1 cut(s)	952
Acc36I	ACCTGC	1 cut(s)	964
AccB1I	GGYRCC	1 cut(s)	888
AccB7I	CCANNNNNTGG	1 cut(s)	77
AccI	GTMKAC	1 cut(s)	1146
AclWI	GGATC	2 cut(s)	811, 1019
AcsI	RAATTY	3 cut(s)	148, 449, 534
AcuI	CTGAAG	3 cut(s)	96, 153, 1242
AcyI	GRCGYC	1 cut(s)	286
AfaI	GTAC	6 cut(s)	7, 162, 525, 623, 1230, 1283
AfiI	CCNNNNNNNGG	2 cut(s)	77, 1333
AhlI	ACTAGT	1 cut(s)	1532
AjiI	CACGTC	1 cut(s)	62
AjnI	CCWGG	4 cut(s)	140, 1161, 1326, 1337
AjuI	GAANNNNNNNTTGG	2 cut(s)	642, 674
AloI	GAACNNNNNNTCC	2 cut(s)	415, 447
Alw21I	GWGCWC	1 cut(s)	1702
Alw26I	GTCTC	1 cut(s)	112
AlwI	GGATC	2 cut(s)	811, 1019
AlwNI	CAGNNNCTG	2 cut(s)	1430, 1660
Ama87I	CYCGRG	2 cut(s)	192, 1029
AoxI	GGCC	5 cut(s)	203, 866, 1236, 1335, 1449
ApeKI	GCWGC	1 cut(s)	436
ApoI	RAATTY	3 cut(s)	148, 449, 534
AseI	ATTAAT	1 cut(s)	549
AspLEI	GCGC	2 cut(s)	953, 1195
AspS9I	GGNCC	1 cut(s)	866
AsuC2I	CCSGG	1 cut(s)	1615
AsuHPI	GGTGA	1 cut(s)	356
AsuII	TTCGAA	1 cut(s)	1670
AvaI	CYCGRG	2 cut(s)	192, 1029
BaeGI	GKGCMC	1 cut(s)	517
BanI	GGYRCC	1 cut(s)	888
BarI	GAAGNNNNNNTAC	2 cut(s)	1633, 1665
BauI	CACGAG	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	1712
Bbv12I	GWGCWC	1 cut(s)	1702
BbvCI	CCTCAGC	1 cut(s)	1563
BbvI	GCAGC	1 cut(s)	448
BccI	CCATC	4 cut(s)	229, 413, 818, 1740
BceAI	ACGGC	2 cut(s)	750, 1199
BciT130I	CCWGG	4 cut(s)	142, 1163, 1328, 1339
BclI	TGATCA	1 cut(s)	831
BcnI	CCSGG	1 cut(s)	1615
BcoDI	GTCTC	1 cut(s)	112
BcuI	ACTAGT	1 cut(s)	1532
BfaI	CTAG	3 cut(s)	186, 1139, 1533
BfmI	CTRYAG	3 cut(s)	86, 210, 1302
BfoI	RGCGCY	1 cut(s)	1196
BfuAI	ACCTGC	1 cut(s)	964
BglI	GCCNNNNNGGC	2 cut(s)	1298, 1457
BisI	GCNGC	1 cut(s)	437
BlsI	GCNGC	1 cut(s)	438
Bme1390I	CCNGG	5 cut(s)	142, 1163, 1328, 1339, 1615
BmeT110I	CYCGRG	2 cut(s)	192, 1029
BmgBI	CACGTC	1 cut(s)	62
BmgT120I	GGNCC	1 cut(s)	866
BmiI	GGNNCC	3 cut(s)	19, 890, 1481
BmrFI	CCNGG	5 cut(s)	142, 1163, 1328, 1339, 1615
BmrI	ACTGGG	2 cut(s)	564, 929
BmsI	GCATC	4 cut(s)	106, 583, 620, 1647
BmuI	ACTGGG	2 cut(s)	564, 929
BpiI	GAAGAC	1 cut(s)	1712
BplI	GAGNNNNNCTC	2 cut(s)	1477, 1509
BpmI	CTGGAG	3 cut(s)	1310, 1418, 1466
Bpu10I	CCTNAGC	1 cut(s)	1563
Bpu14I	TTCGAA	1 cut(s)	1670
BpuEI	CTTGAG	2 cut(s)	1382, 1430
BpuMI	CCSGG	1 cut(s)	1615
BsaAI	YACGTR	1 cut(s)	160
BsaHI	GRCGYC	1 cut(s)	286
BsaJI	CCNNGG	2 cut(s)	140, 1338
Bsc4I	CCNNNNNNNGG	2 cut(s)	77, 1333
Bse1I	ACTGG	3 cut(s)	294, 559, 924
BseBI	CCWGG	4 cut(s)	142, 1163, 1328, 1339
BseDI	CCNNGG	2 cut(s)	140, 1338
BseGI	GGATG	3 cut(s)	411, 574, 1732
BseLI	CCNNNNNNNGG	2 cut(s)	77, 1333
BseMII	CTCAG	6 cut(s)	168, 395, 1554, 1560, 1637, 1667
BseNI	ACTGG	3 cut(s)	294, 559, 924
BseSI	GKGCMC	1 cut(s)	517
BseXI	GCAGC	1 cut(s)	448
BseYI	CCCAGC	1 cut(s)	77
BshFI	GGCC	5 cut(s)	205, 868, 1238, 1337, 1451
BshNI	GGYRCC	1 cut(s)	888
BsiHKAI	GWGCWC	1 cut(s)	1702
BsiHKCI	CYCGRG	2 cut(s)	192, 1029
BsiSI	CCGG	1 cut(s)	1615
BslFI	GGGAC	4 cut(s)	96, 112, 154, 332
BslI	CCNNNNNNNGG	2 cut(s)	77, 1333
BsmAI	GTCTC	1 cut(s)	112
BsmFI	GGGAC	4 cut(s)	96, 112, 154, 332
BsmI	GAATGC	2 cut(s)	54, 566
BsnI	GGCC	5 cut(s)	205, 868, 1238, 1337, 1451
BsoBI	CYCGRG	2 cut(s)	192, 1029
Bsp119I	TTCGAA	1 cut(s)	1670
Bsp1286I	GDGCHC	2 cut(s)	517, 1702
Bsp1407I	TGTACA	2 cut(s)	621, 1281
Bsp143I	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
BspANI	GGCC	5 cut(s)	205, 868, 1238, 1337, 1451
BspCNI	CTCAG	6 cut(s)	169, 396, 1555, 1561, 1636, 1666
BspLI	GGNNCC	3 cut(s)	19, 890, 1481
BspMAI	CTGCAG	1 cut(s)	214
BspMI	ACCTGC	1 cut(s)	964
BspPI	GGATC	2 cut(s)	811, 1019
BspQI	GCTCTTC	1 cut(s)	1386
BspT104I	TTCGAA	1 cut(s)	1670
BspT107I	GGYRCC	1 cut(s)	888
BsrGI	TGTACA	2 cut(s)	621, 1281
BsrI	ACTGG	3 cut(s)	294, 559, 924
BssECI	CCNNGG	2 cut(s)	140, 1338
BssMI	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
BssNI	GRCGYC	1 cut(s)	286
BssSI	CACGAG	1 cut(s)	72
Bst2BI	CACGAG	1 cut(s)	72
Bst2UI	CCWGG	4 cut(s)	142, 1163, 1328, 1339
Bst4CI	ACNGT	3 cut(s)	812, 1631, 1694
Bst6I	CTCTTC	4 cut(s)	115, 318, 1049, 1386
BstACI	GRCGYC	1 cut(s)	286
BstAPI	GCANNNNNTGC	1 cut(s)	1684
BstAUI	TGTACA	2 cut(s)	621, 1281
BstBAI	YACGTR	1 cut(s)	160
BstBI	TTCGAA	1 cut(s)	1670
BstC8I	GCNNGC	3 cut(s)	646, 898, 1718
BstDEI	CTNAG	8 cut(s)	177, 228, 404, 498, 1563, 1569, 1623, 1653
BstF5I	GGATG	3 cut(s)	411, 574, 1732
BstH2I	RGCGCY	1 cut(s)	1196
BstHHI	GCGC	2 cut(s)	953, 1195
BstKTI	GATC	6 cut(s)	157, 819, 834, 1027, 1596, 1684
BstMAI	GTCTC	1 cut(s)	112
BstMBI	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
BstMWI	GCNNNNNNNGC	8 cut(s)	224, 897, 1192, 1298, 1307, 1366, 1457, 1684
BstNI	CCWGG	4 cut(s)	142, 1163, 1328, 1339
BstNSI	RCATGY	1 cut(s)	648
BstSCI	CCNGG	5 cut(s)	140, 1161, 1326, 1337, 1613
BstSFI	CTRYAG	3 cut(s)	86, 210, 1302
BstSLI	GKGCMC	1 cut(s)	517
BstV1I	GCAGC	1 cut(s)	448
BstV2I	GAAGAC	1 cut(s)	1712
BstX2I	RGATCY	1 cut(s)	1024
BstYI	RGATCY	1 cut(s)	1024
BsuRI	GGCC	5 cut(s)	205, 868, 1238, 1337, 1451
BtrI	CACGTC	1 cut(s)	62
BtsCI	GGATG	3 cut(s)	411, 574, 1732
BtsI	GCAGTG	1 cut(s)	946
BtsIMutI	CAGTG	5 cut(s)	301, 804, 946, 1636, 1699
BveI	ACCTGC	1 cut(s)	964
Cac8I	GCNNGC	3 cut(s)	646, 898, 1718
CaiI	CAGNNNCTG	2 cut(s)	1430, 1660
CfoI	GCGC	2 cut(s)	953, 1195
Cfr13I	GGNCC	1 cut(s)	866
CseI	GACGC	1 cut(s)	275
Csp6I	GTAC	6 cut(s)	6, 161, 524, 622, 1229, 1282
CviAII	CATG	5 cut(s)	164, 645, 838, 1013, 1679
CviQI	GTAC	6 cut(s)	6, 161, 524, 622, 1229, 1282
DdeI	CTNAG	8 cut(s)	177, 228, 404, 498, 1563, 1569, 1623, 1653
DpnI	GATC	6 cut(s)	156, 818, 833, 1026, 1595, 1683
DpnII	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
Eam1104I	CTCTTC	4 cut(s)	115, 318, 1049, 1386
EarI	CTCTTC	4 cut(s)	115, 318, 1049, 1386
Eco32I	GATATC	1 cut(s)	309
Eco57I	CTGAAG	3 cut(s)	96, 153, 1242
Eco88I	CYCGRG	2 cut(s)	192, 1029
EcoRII	CCWGG	4 cut(s)	140, 1161, 1326, 1337
EcoRV	GATATC	1 cut(s)	309
EcoT22I	ATGCAT	1 cut(s)	1680
FaeI	CATG	5 cut(s)	167, 648, 841, 1016, 1682
FaqI	GGGAC	4 cut(s)	96, 112, 154, 332
FatI	CATG	5 cut(s)	163, 644, 837, 1012, 1678
FbaI	TGATCA	1 cut(s)	831
FblI	GTMKAC	1 cut(s)	1146
Fnu4HI	GCNGC	1 cut(s)	437
FokI	GGATG	3 cut(s)	398, 561, 1719
Fsp4HI	GCNGC	1 cut(s)	437
FspBI	CTAG	3 cut(s)	186, 1139, 1533
FspI	TGCGCA	1 cut(s)	952
GlaI	GCGC	2 cut(s)	952, 1194
GluI	GCNGC	1 cut(s)	437
GsaI	CCCAGC	1 cut(s)	81
GsuI	CTGGAG	3 cut(s)	1310, 1418, 1466
HaeII	RGCGCY	1 cut(s)	1196
HaeIII	GGCC	5 cut(s)	205, 868, 1238, 1337, 1451
HapII	CCGG	1 cut(s)	1615
HgaI	GACGC	1 cut(s)	275
HhaI	GCGC	2 cut(s)	953, 1195
Hin1I	GRCGYC	1 cut(s)	286
Hin1II	CATG	5 cut(s)	167, 648, 841, 1016, 1682
Hin6I	GCGC	2 cut(s)	951, 1193
HinP1I	GCGC	2 cut(s)	951, 1193
HindIII	AAGCTT	2 cut(s)	467, 1358
HinfI	GANTC	8 cut(s)	167, 361, 408, 559, 658, 799, 1094, 1148
HpaII	CCGG	1 cut(s)	1615
HphI	GGTGA	1 cut(s)	356
Hpy166II	GTNNAC	4 cut(s)	622, 757, 1147, 1181
Hpy188III	TCNNGA	9 cut(s)	45, 192, 194, 266, 317, 383, 1048, 1349, 1483
Hpy8I	GTNNAC	4 cut(s)	622, 757, 1147, 1181
HpyAV	CCTTC	3 cut(s)	48, 1169, 1659
HpyCH4III	ACNGT	3 cut(s)	812, 1631, 1694
HpyCH4IV	ACGT	2 cut(s)	61, 159
HpyF10VI	GCNNNNNNNGC	8 cut(s)	224, 897, 1192, 1298, 1307, 1366, 1457, 1684
HpyF3I	CTNAG	8 cut(s)	177, 228, 404, 498, 1563, 1569, 1623, 1653
HpySE526I	ACGT	2 cut(s)	61, 159
Hsp92I	GRCGYC	1 cut(s)	286
Hsp92II	CATG	5 cut(s)	167, 648, 841, 1016, 1682
HspAI	GCGC	2 cut(s)	951, 1193
Ksp22I	TGATCA	1 cut(s)	831
Kzo9I	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
LguI	GCTCTTC	1 cut(s)	1386
LmnI	GCTCC	4 cut(s)	860, 985, 1485, 1705
Lsp1109I	GCAGC	1 cut(s)	448
LweI	GCATC	4 cut(s)	106, 583, 620, 1647
MaeI	CTAG	3 cut(s)	186, 1139, 1533
MaeII	ACGT	2 cut(s)	61, 159
MaeIII	GTNAC	3 cut(s)	734, 1208, 1535
MalI	GATC	6 cut(s)	156, 818, 833, 1026, 1595, 1683
MboI	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
MflI	RGATCY	1 cut(s)	1024
MhlI	GDGCHC	2 cut(s)	517, 1702
MluCI	AATT	6 cut(s)	148, 389, 449, 534, 1215, 1404
MlyI	GAGTC	4 cut(s)	176, 417, 793, 1142
Mph1103I	ATGCAT	1 cut(s)	1680
MseI	TTAA	4 cut(s)	491, 549, 852, 1065
MslI	CAYNNNNRTG	2 cut(s)	162, 1017
MspA1I	CMGCKG	1 cut(s)	665
MspI	CCGG	1 cut(s)	1615
MspR9I	CCNGG	5 cut(s)	142, 1163, 1328, 1339, 1615
Mva1269I	GAATGC	2 cut(s)	54, 566
MvaI	CCWGG	4 cut(s)	142, 1163, 1328, 1339
MwoI	GCNNNNNNNGC	8 cut(s)	224, 897, 1192, 1298, 1307, 1366, 1457, 1684
NciI	CCSGG	1 cut(s)	1615
NdeII	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
NlaIII	CATG	5 cut(s)	167, 648, 841, 1016, 1682
NlaIV	GGNNCC	3 cut(s)	19, 890, 1481
NmeAIII	GCCGAG	2 cut(s)	100, 917
NsbI	TGCGCA	1 cut(s)	952
NsiI	ATGCAT	1 cut(s)	1680
NspI	RCATGY	1 cut(s)	648
NspV	TTCGAA	1 cut(s)	1670
PaeI	GCATGC	1 cut(s)	648
PaeR7I	CTCGAG	2 cut(s)	192, 1029
PaqCI	CACCTGC	1 cut(s)	964
PciSI	GCTCTTC	1 cut(s)	1386
PctI	GAATGC	2 cut(s)	54, 566
PfeI	GAWTC	4 cut(s)	361, 559, 658, 1094
PflMI	CCANNNNNTGG	1 cut(s)	77
PfoI	TCCNGGA	1 cut(s)	1326
PkrI	GCNGC	1 cut(s)	438
PleI	GAGTC	4 cut(s)	175, 416, 793, 1142
PpsI	GAGTC	4 cut(s)	175, 416, 793, 1142
Ppu21I	YACGTR	1 cut(s)	160
PshBI	ATTAAT	1 cut(s)	549
Psp6I	CCWGG	4 cut(s)	140, 1161, 1326, 1337
PspFI	CCCAGC	1 cut(s)	77
PspGI	CCWGG	4 cut(s)	140, 1161, 1326, 1337
PspN4I	GGNNCC	3 cut(s)	19, 890, 1481
PspPI	GGNCC	1 cut(s)	866
PspXI	VCTCGAGB	1 cut(s)	1029
PstI	CTGCAG	1 cut(s)	214
PstNI	CAGNNNCTG	2 cut(s)	1430, 1660
PsuI	RGATCY	1 cut(s)	1024
PvuII	CAGCTG	1 cut(s)	665
RsaI	GTAC	6 cut(s)	7, 162, 525, 623, 1230, 1283
RsaNI	GTAC	6 cut(s)	6, 161, 524, 622, 1229, 1282
RseI	CAYNNNNRTG	2 cut(s)	162, 1017
SapI	GCTCTTC	1 cut(s)	1386
SaqAI	TTAA	4 cut(s)	491, 549, 852, 1065
SatI	GCNGC	1 cut(s)	437
Sau3AI	GATC	6 cut(s)	154, 816, 831, 1024, 1593, 1681
Sau96I	GGNCC	1 cut(s)	866
SchI	GAGTC	4 cut(s)	176, 417, 793, 1142
ScrFI	CCNGG	5 cut(s)	142, 1163, 1328, 1339, 1615
SduI	GDGCHC	2 cut(s)	517, 1702
SfaNI	GCATC	4 cut(s)	106, 583, 620, 1647
SfcI	CTRYAG	3 cut(s)	86, 210, 1302
Sfr274I	CTCGAG	2 cut(s)	192, 1029
SfuI	TTCGAA	1 cut(s)	1670
SlaI	CTCGAG	2 cut(s)	192, 1029
SmiMI	CAYNNNNRTG	2 cut(s)	162, 1017
SmlI	CTYRAG	4 cut(s)	192, 1029, 1361, 1445
SmoI	CTYRAG	4 cut(s)	192, 1029, 1361, 1445
SpeI	ACTAGT	1 cut(s)	1532
SphI	GCATGC	1 cut(s)	648
Sse9I	AATT	6 cut(s)	148, 389, 449, 534, 1215, 1404
SspI	AATATT	1 cut(s)	1119
SspMI	CTAG	3 cut(s)	186, 1139, 1533
StyD4I	CCNGG	5 cut(s)	140, 1161, 1326, 1337, 1613
TaaI	ACNGT	3 cut(s)	812, 1631, 1694
TaiI	ACGT	2 cut(s)	64, 162
TaqI	TCGA	5 cut(s)	44, 193, 520, 1030, 1670
TaqII	GACCGA	1 cut(s)	265
TasI	AATT	6 cut(s)	148, 389, 449, 534, 1215, 1404
TatI	WGTACW	3 cut(s)	523, 621, 1281
TfiI	GAWTC	4 cut(s)	361, 559, 658, 1094
Tru1I	TTAA	4 cut(s)	491, 549, 852, 1065
Tru9I	TTAA	4 cut(s)	491, 549, 852, 1065
TscAI	CASTG	5 cut(s)	301, 811, 953, 1636, 1699
TseI	GCWGC	1 cut(s)	436
TspDTI	ATGAA	4 cut(s)	30, 374, 1001, 1740
TspGWI	ACGGA	2 cut(s)	809, 1724
TspRI	CASTG	5 cut(s)	301, 811, 953, 1636, 1699
Van91I	CCANNNNNTGG	1 cut(s)	77
VspI	ATTAAT	1 cut(s)	549
XapI	RAATTY	3 cut(s)	148, 449, 534
XceI	RCATGY	1 cut(s)	648
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1246
XhoI	CTCGAG	2 cut(s)	192, 1029
XmiI	GTMKAC	1 cut(s)	1146
XspI	CTAG	3 cut(s)	186, 1139, 1533
Zsp2I	ATGCAT	1 cut(s)	1680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.