AT5G48520

HAUS augmin-like complex subunit 3 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0005161
Physical Location & Seq
Forward (+)
19661203 .. 19666436
5234 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G48520.2

Sequence Viewer

Length: 1854 bp
ATGAGCAGCGCGAGACTGTGCTCTCTTGTGGCGGAGCTAGGTTACGAAGGCGCCGGAAAATTGGATCCCGATAGCTTCGAATGGCCGTTTCAGTACGACGATGCTCGACCTATCCTCGACTGGATCTGTTCCTCTCTTCGTCCTTCCAATGTCCTCTCTCTCGCCGAACTATCACTATATGAGCAATTTCAACGAGATGGGAAACTCTTAGAGGGCGATGATCTAGACCAGGCATATGATAGCATATCAGCATTTTCTTCCAGGAGAAATAACCAGGAGGCCGTTTTTGGAGCAGAAGAAAGCATTAAAGAAGTAAGAGATGCAACTTTGGCGCATAAGGCTGAAGCCTTAGAGTTGCAGAGGCAGCTAAGGCGGTTACAAACTCAATATGATTTACTCACTGGCCAATCTTCAGCTCTTATTCAAGGGAGACGTGCTCGAGTTGCTGCAACTTCTGCTGTCTCTGGACAGATAACAGCTATAGAAGACAGTTTATCTGCTCGAAATTTGCAGATGAATGGAGTTCTAGGAAGACTGGCTTCCACTTCTCAAGAGCTGGCGCATTATCATTCTGGCGAAGAGGATGGAATATACTTAGCATACTCCGATTTCCATGCCTACTTGGCTGGAGATTCAGCCTGCACAAAGGAGCTAAATCAGTGGTTTGCTAAGCAGCTAGACACAGGGCCATACCGTTTAGTTGCAGAGGAAGGAAAATCGAAATGCTCATGGGTCAGTCTTGATGATACATCTAACATGTTGCGAGATTTGGAAAAGTCACAGCATCAACGTGTAGCTGAACTCCAACGGCTTCGGTCCATCTTTGGAACAAGTGAGAGACAATGGATTGAAGCCCAGGTGGAGAATGCTAAGCAACAAGCTATTCTTTTGACACTCAAATCTCAAGTAACATCAGTGGAAGCTCATATTCATTTTGATCTACATTCTCTGAGGAGAAAACATGCAGATCTAGTCGAAGAAATCTCTACCCTTTATCAGAAAGAAGAAAAACTCTTATCTGAGACTATTCCCGAACTATGTTGGGAGCTCGCACAACTGCAGGACACCTATATCTTGCAAGGTGACTACGATCTAAAGGTCATGCGTCAAGAACTGTATATTAGTAAACAGAAAGTGTTCATCAATCATCTGGTTAATCAGCTAGCAAGACACCAGTTCTTAAAATTAGCATGTCAGCTAGAAAAGAAAAACATGCTTGGAGCATTCTCTCTGCTAAAAGTAATTGAATCCGAACTTCAGGGCTACCTCTCCGCCACAAGAAGCCGTGTGGGGCGATGTTCGGCACTGATACAAGCTGCATCTGATGTGCAAGAACAAGGAGCAGTAGATGACCGTGACAGCTTTTTACATGGAGTTAGAGATCTCTTGAGCATTCACTCAAATACCCAAGCCGGATTATCAACTTATGTCTCAGCTCCAGCCATCATTCAGCAGATAGTTGCTCTTCAATCCGATCTGTCGTCTCTTCAGTCTGACCTCGAGAATTCCCTTCCAGATGACCGAAATAGATGCATTAATGAGCTGTGTACCCATATTCAGAATCTGCAGCAACTGCTCTTTGCGTCTTCAACTACGGCACAACCCATATTGACACCTTGGCCACTGATGAAAGAACTTGATGAAATGGGGAAAATCAACTCCAAACTCTCTACAGCAGTGGAAGAGGTGACGCTTGAGCACCGCAATAAAAGGGAGATTGTGAAGCATCACGCCAAGGACGTGGAACTTCAAAGGCGGGTATTTGTGGACTTTTTCTGCAACCCAGAGCGATTGAGAAACCAAGTGAGGGAACTCAATGCACTCGTTCGTGCTCGCCAAGCCTCATCATCGTAG

Protein Analysis

617

Amino Acids

69.72

Weight (kDa)

5.55

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAUS-augmin3 PF14932 28 - 289 4.2e-82 HAUS augmin-like complex subunit 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccII CGCG 1 cut(s) 11
AciI CCGC 5 cut(s) 32, 373, 1272, 1702, 1756
AclWI GGATC 3 cut(s) 59, 72, 131
AcoI YGGCCR 3 cut(s) 83, 403, 1619
AcsI RAATTY 2 cut(s) 505, 1504
AcuI CTGAAG 4 cut(s) 363, 396, 1241, 1472
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 2 cut(s) 95, 1549
AfiI CCNNNNNNNGG 1 cut(s) 1807
AflIII ACRYGT 2 cut(s) 756, 790
AgsI TTSAA 7 cut(s) 191, 425, 851, 1247, 1469, 1590, 1751
AjiI CACGTC 2 cut(s) 434, 1741
AjnI CCWGG 4 cut(s) 228, 260, 273, 855
Alw21I GWGCWC 5 cut(s) 23, 439, 1050, 1701, 1834
Alw26I GTCTC 7 cut(s) 7, 424, 466, 832, 1016, 1435, 1488
AlwI GGATC 3 cut(s) 59, 72, 131
AlwNI CAGNNNCTG 2 cut(s) 1564, 1573
Ama87I CYCGRG 2 cut(s) 438, 1499
AoxI GGCC 5 cut(s) 83, 279, 403, 686, 1619
ApeKI GCWGC 6 cut(s) 6, 364, 446, 673, 1316, 1567
ApoI RAATTY 2 cut(s) 505, 1504
AseI ATTAAT 1 cut(s) 1536
Asp700I GAANNNNTTC 1 cut(s) 1136
AspLEI GCGC 4 cut(s) 11, 53, 334, 562
AspS9I GGNCC 2 cut(s) 686, 816
AsuHPI GGTGA 2 cut(s) 1094, 1699
AsuII TTCGAA 1 cut(s) 78
AsuNHI GCTAGC 1 cut(s) 1162
AvaI CYCGRG 2 cut(s) 438, 1499
AvaII GGWCC 1 cut(s) 816
BalI TGGCCA 2 cut(s) 405, 1621
BamHI GGATCC 1 cut(s) 64
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 1050
BbsI GAAGAC 3 cut(s) 492, 538, 1578
Bbv12I GWGCWC 5 cut(s) 23, 439, 1050, 1701, 1834
BbvI GCAGC 6 cut(s) 18, 376, 433, 685, 1303, 1579
BccI CCATC 4 cut(s) 191, 578, 827, 1451
BceAI ACGGC 5 cut(s) 70, 266, 824, 1269, 1611
BcgI CGANNNNNNTGC 4 cut(s) 596, 630, 1512, 1546
BciT130I CCWGG 4 cut(s) 230, 262, 275, 857
BcoDI GTCTC 7 cut(s) 7, 424, 466, 832, 1016, 1435, 1488
BfaI CTAG 7 cut(s) 38, 224, 527, 677, 971, 1163, 1199
BfmI CTRYAG 4 cut(s) 480, 1058, 1565, 1671
BfoI RGCGCY 1 cut(s) 54
BglI GCCNNNNNGGC 1 cut(s) 623
BglII AGATCT 2 cut(s) 967, 1381
BisI GCNGC 6 cut(s) 7, 365, 447, 674, 1317, 1568
BlpI GCTNAGC 2 cut(s) 669, 870
BlsI GCNGC 6 cut(s) 8, 366, 448, 675, 1318, 1569
Bme1390I CCNGG 4 cut(s) 230, 262, 275, 857
Bme18I GGWCC 1 cut(s) 816
BmeT110I CYCGRG 2 cut(s) 438, 1499
BmgBI CACGTC 2 cut(s) 434, 1741
BmgT120I GGNCC 2 cut(s) 686, 816
BmiI GGNNCC 2 cut(s) 52, 66
BmrFI CCNGG 4 cut(s) 230, 262, 275, 857
BmsI GCATC 6 cut(s) 91, 310, 793, 1328, 1520, 1735
BmtI GCTAGC 1 cut(s) 1166
BpiI GAAGAC 3 cut(s) 492, 538, 1578
BplI GAGNNNNNCTC 2 cut(s) 421, 453
BpmI CTGGAG 2 cut(s) 648, 1422
Bpu10I CCTNAGC 1 cut(s) 368
Bpu1102I GCTNAGC 2 cut(s) 669, 870
Bpu14I TTCGAA 1 cut(s) 78
BpuEI CTTGAG 4 cut(s) 534, 888, 1408, 1715
BsaHI GRCGYC 1 cut(s) 51
BsaJI CCNNGG 3 cut(s) 855, 1616, 1734
Bsc4I CCNNNNNNNGG 1 cut(s) 1807
Bse1I ACTGG 4 cut(s) 125, 406, 540, 1174
BseBI CCWGG 4 cut(s) 230, 262, 275, 857
BseDI CCNNGG 3 cut(s) 855, 1616, 1734
BseGI GGATG 1 cut(s) 589
BseLI CCNNNNNNNGG 1 cut(s) 1807
BseMII CTCAG 3 cut(s) 941, 1011, 1446
BseNI ACTGG 4 cut(s) 125, 406, 540, 1174
BseRI GAGGAG 1 cut(s) 967
BseXI GCAGC 6 cut(s) 18, 376, 433, 685, 1303, 1579
BsgI GTGCAG 1 cut(s) 625
Bsh1236I CGCG 1 cut(s) 11
BshFI GGCC 5 cut(s) 85, 281, 405, 688, 1621
BshNI GGYRCC 1 cut(s) 50
BsiHKAI GWGCWC 5 cut(s) 23, 439, 1050, 1701, 1834
BsiHKCI CYCGRG 2 cut(s) 438, 1499
BsiSI CCGG 2 cut(s) 54, 1413
BslI CCNNNNNNNGG 1 cut(s) 1807
BsmAI GTCTC 7 cut(s) 7, 424, 466, 832, 1016, 1435, 1488
BsmBI CGTCTC 2 cut(s) 424, 1488
BsmI GAATGC 3 cut(s) 871, 1223, 1392
BsnI GGCC 5 cut(s) 85, 281, 405, 688, 1621
BsoBI CYCGRG 2 cut(s) 438, 1499
Bsp119I TTCGAA 1 cut(s) 78
Bsp1286I GDGCHC 5 cut(s) 23, 439, 1050, 1701, 1834
Bsp143I GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
Bsp1720I GCTNAGC 2 cut(s) 669, 870
BspACI CCGC 5 cut(s) 32, 373, 1272, 1702, 1756
BspANI GGCC 5 cut(s) 85, 281, 405, 688, 1621
BspCNI CTCAG 3 cut(s) 942, 1012, 1445
BspFNI CGCG 1 cut(s) 11
BspLI GGNNCC 2 cut(s) 52, 66
BspMAI CTGCAG 2 cut(s) 1062, 1569
BspOI GCTAGC 1 cut(s) 1166
BspPI GGATC 3 cut(s) 59, 72, 131
BspQI GCTCTTC 1 cut(s) 1470
BspT104I TTCGAA 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 50
BsrI ACTGG 4 cut(s) 125, 406, 540, 1174
BssECI CCNNGG 3 cut(s) 855, 1616, 1734
BssMI GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 2 cut(s) 1616, 1734
Bst2UI CCWGG 4 cut(s) 230, 262, 275, 857
Bst4CI ACNGT 5 cut(s) 18, 491, 695, 1116, 1355
Bst6I CTCTTC 5 cut(s) 141, 573, 1470, 1491, 1677
BstACI GRCGYC 1 cut(s) 51
BstAPI GCANNNNNTGC 2 cut(s) 455, 1573
BstBI TTCGAA 1 cut(s) 78
BstC8I GCNNGC 5 cut(s) 558, 640, 1050, 1164, 1834
BstDEI CTNAG 9 cut(s) 208, 349, 368, 595, 669, 870, 950, 1020, 1432
BstF5I GGATG 1 cut(s) 589
BstFNI CGCG 1 cut(s) 11
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 4 cut(s) 11, 53, 334, 562
BstKTI GATC 8 cut(s) 67, 126, 223, 940, 970, 1093, 1384, 1477
BstMAI GTCTC 7 cut(s) 7, 424, 466, 832, 1016, 1435, 1488
BstMBI GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
BstMWI GCNNNNNNNGC 9 cut(s) 329, 338, 364, 370, 443, 455, 623, 1573, 1838
BstNI CCWGG 4 cut(s) 230, 262, 275, 857
BstNSI RCATGY 4 cut(s) 760, 965, 1194, 1216
BstSCI CCNGG 4 cut(s) 228, 260, 273, 855
BstSFI CTRYAG 4 cut(s) 480, 1058, 1565, 1671
BstUI CGCG 1 cut(s) 11
BstV1I GCAGC 6 cut(s) 18, 376, 433, 685, 1303, 1579
BstV2I GAAGAC 3 cut(s) 492, 538, 1578
BstX2I RGATCY 4 cut(s) 64, 123, 967, 1381
BstXI CCANNNNNNTGG 1 cut(s) 1741
BstYI RGATCY 4 cut(s) 64, 123, 967, 1381
BsuRI GGCC 5 cut(s) 85, 281, 405, 688, 1621
BtgZI GCGATG 2 cut(s) 231, 1309
BtrI CACGTC 2 cut(s) 434, 1741
BtsCI GGATG 1 cut(s) 589
BtsI GCAGTG 1 cut(s) 1683
BtsIMutI CAGTG 6 cut(s) 399, 665, 921, 1304, 1622, 1683
Cac8I GCNNGC 5 cut(s) 558, 640, 1050, 1164, 1834
CaiI CAGNNNCTG 2 cut(s) 1564, 1573
CfoI GCGC 4 cut(s) 11, 53, 334, 562
Cfr13I GGNCC 2 cut(s) 686, 816
CseI GACGC 3 cut(s) 1094, 1572, 1699
Csp6I GTAC 2 cut(s) 94, 1548
CviAII CATG 8 cut(s) 614, 729, 757, 962, 1102, 1191, 1213, 1370
CviQI GTAC 2 cut(s) 94, 1548
DdeI CTNAG 9 cut(s) 208, 349, 368, 595, 669, 870, 950, 1020, 1432
DinI GGCGCC 1 cut(s) 52
DpnI GATC 8 cut(s) 66, 125, 222, 939, 969, 1092, 1383, 1476
DpnII GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
EaeI YGGCCR 3 cut(s) 83, 403, 1619
Eam1104I CTCTTC 5 cut(s) 141, 573, 1470, 1491, 1677
EarI CTCTTC 5 cut(s) 141, 573, 1470, 1491, 1677
EciI GGCGGA 2 cut(s) 47, 1261
Ecl136II GAGCTC 1 cut(s) 1048
Eco130I CCWWGG 2 cut(s) 1616, 1734
Eco24I GRGCYC 1 cut(s) 1050
Eco47I GGWCC 1 cut(s) 816
Eco53kI GAGCTC 1 cut(s) 1048
Eco57I CTGAAG 4 cut(s) 363, 396, 1241, 1472
Eco88I CYCGRG 2 cut(s) 438, 1499
EcoICRI GAGCTC 1 cut(s) 1048
EcoRI GAATTC 1 cut(s) 1504
EcoRII CCWGG 4 cut(s) 228, 260, 273, 855
EcoT14I CCWWGG 2 cut(s) 1616, 1734
EcoT22I ATGCAT 1 cut(s) 1535
EcoT38I GRGCYC 1 cut(s) 1050
EgeI GGCGCC 1 cut(s) 52
EheI GGCGCC 1 cut(s) 52
ErhI CCWWGG 2 cut(s) 1616, 1734
Esp3I CGTCTC 2 cut(s) 424, 1488
FaeI CATG 8 cut(s) 617, 732, 760, 965, 1105, 1194, 1216, 1373
FalI AAGNNNNNCTT 4 cut(s) 523, 555, 870, 902
FatI CATG 8 cut(s) 613, 728, 756, 961, 1101, 1190, 1212, 1369
FauI CCCGC 1 cut(s) 1749
FauNDI CATATG 1 cut(s) 235
Fnu4HI GCNGC 6 cut(s) 7, 365, 447, 674, 1317, 1568
FokI GGATG 1 cut(s) 596
FriOI GRGCYC 1 cut(s) 1050
Fsp4HI GCNGC 6 cut(s) 7, 365, 447, 674, 1317, 1568
FspBI CTAG 7 cut(s) 38, 224, 527, 677, 971, 1163, 1199
GlaI GCGC 4 cut(s) 10, 52, 333, 561
GluI GCNGC 6 cut(s) 7, 365, 447, 674, 1317, 1568
GsuI CTGGAG 2 cut(s) 648, 1422
HaeII RGCGCY 1 cut(s) 54
HaeIII GGCC 5 cut(s) 85, 281, 405, 688, 1621
HapII CCGG 2 cut(s) 54, 1413
HgaI GACGC 3 cut(s) 1094, 1572, 1699
HhaI GCGC 4 cut(s) 11, 53, 334, 562
Hin1I GRCGYC 1 cut(s) 51
Hin1II CATG 8 cut(s) 617, 732, 760, 965, 1105, 1194, 1216, 1373
Hin6I GCGC 4 cut(s) 9, 51, 332, 560
HinP1I GCGC 4 cut(s) 9, 51, 332, 560
HinfI GANTC 3 cut(s) 632, 1247, 1561
HpaII CCGG 2 cut(s) 54, 1413
HphI GGTGA 2 cut(s) 1094, 1699
Hpy166II GTNNAC 3 cut(s) 1127, 1548, 1768
Hpy188I TCNGA 9 cut(s) 607, 951, 999, 1021, 1252, 1324, 1474, 1495, 1560
Hpy8I GTNNAC 3 cut(s) 1127, 1548, 1768
Hpy99I CGWCG 1 cut(s) 101
HpyAV CCTTC 4 cut(s) 41, 153, 704, 1520
HpyCH4III ACNGT 5 cut(s) 18, 491, 695, 1116, 1355
HpyCH4IV ACGT 3 cut(s) 433, 790, 1740
HpyF10VI GCNNNNNNNGC 9 cut(s) 329, 338, 364, 370, 443, 455, 623, 1573, 1838
HpyF3I CTNAG 9 cut(s) 208, 349, 368, 595, 669, 870, 950, 1020, 1432
HpySE526I ACGT 3 cut(s) 433, 790, 1740
Hsp92I GRCGYC 1 cut(s) 51
Hsp92II CATG 8 cut(s) 617, 732, 760, 965, 1105, 1194, 1216, 1373
HspAI GCGC 4 cut(s) 9, 51, 332, 560
KasI GGCGCC 1 cut(s) 50
Kzo9I GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
LguI GCTCTTC 1 cut(s) 1470
LmnI GCTCC 7 cut(s) 34, 290, 649, 1045, 1220, 1340, 1441
Lsp1109I GCAGC 6 cut(s) 18, 376, 433, 685, 1303, 1579
LweI GCATC 6 cut(s) 91, 310, 793, 1328, 1520, 1735
MaeI CTAG 7 cut(s) 38, 224, 527, 677, 971, 1163, 1199
MaeII ACGT 3 cut(s) 433, 790, 1740
MaeIII GTNAC 7 cut(s) 41, 375, 777, 907, 1082, 1355, 1687
MalI GATC 8 cut(s) 66, 125, 222, 939, 969, 1092, 1383, 1476
MboI GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
MflI RGATCY 4 cut(s) 64, 123, 967, 1381
MhlI GDGCHC 5 cut(s) 23, 439, 1050, 1701, 1834
MlsI TGGCCA 2 cut(s) 405, 1621
MluCI AATT 6 cut(s) 59, 185, 505, 1184, 1242, 1504
MluNI TGGCCA 2 cut(s) 405, 1621
Mly113I GGCGCC 1 cut(s) 51
MmeI TCCRAC 1 cut(s) 829
Mox20I TGGCCA 2 cut(s) 405, 1621
Mph1103I ATGCAT 1 cut(s) 1535
MroXI GAANNNNTTC 1 cut(s) 1136
MscI TGGCCA 2 cut(s) 405, 1621
MseI TTAA 4 cut(s) 306, 1155, 1181, 1536
MslI CAYNNNNRTG 1 cut(s) 789
Msp20I TGGCCA 2 cut(s) 405, 1621
MspI CCGG 2 cut(s) 54, 1413
MspR9I CCNGG 4 cut(s) 230, 262, 275, 857
Mva1269I GAATGC 3 cut(s) 871, 1223, 1392
MvaI CCWGG 4 cut(s) 230, 262, 275, 857
MvnI CGCG 1 cut(s) 11
MwoI GCNNNNNNNGC 9 cut(s) 329, 338, 364, 370, 443, 455, 623, 1573, 1838
NarI GGCGCC 1 cut(s) 51
NdeI CATATG 1 cut(s) 235
NdeII GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
NheI GCTAGC 1 cut(s) 1162
NlaIII CATG 8 cut(s) 617, 732, 760, 965, 1105, 1194, 1216, 1373
NlaIV GGNNCC 2 cut(s) 52, 66
NmuCI GTSAC 4 cut(s) 777, 1082, 1355, 1687
NsiI ATGCAT 1 cut(s) 1535
NspI RCATGY 4 cut(s) 760, 965, 1194, 1216
NspV TTCGAA 1 cut(s) 78
PaeR7I CTCGAG 2 cut(s) 438, 1499
PciI ACATGT 1 cut(s) 756
PciSI GCTCTTC 1 cut(s) 1470
PcsI WCGNNNNNNNCGW 1 cut(s) 1737
PctI GAATGC 3 cut(s) 871, 1223, 1392
PdmI GAANNNNTTC 1 cut(s) 1136
PfeI GAWTC 3 cut(s) 632, 1247, 1561
PfoI TCCNGGA 1 cut(s) 260
PkrI GCNGC 6 cut(s) 8, 366, 448, 675, 1318, 1569
PluTI GGCGCC 1 cut(s) 54
PscI ACATGT 1 cut(s) 756
PshBI ATTAAT 1 cut(s) 1536
Psp124BI GAGCTC 1 cut(s) 1050
Psp6I CCWGG 4 cut(s) 228, 260, 273, 855
PspGI CCWGG 4 cut(s) 228, 260, 273, 855
PspN4I GGNNCC 2 cut(s) 52, 66
PspPI GGNCC 2 cut(s) 686, 816
PspXI VCTCGAGB 1 cut(s) 438
PstI CTGCAG 2 cut(s) 1062, 1569
PstNI CAGNNNCTG 2 cut(s) 1564, 1573
PsuI RGATCY 4 cut(s) 64, 123, 967, 1381
RsaI GTAC 2 cut(s) 95, 1549
RsaNI GTAC 2 cut(s) 94, 1548
RseI CAYNNNNRTG 1 cut(s) 789
SacI GAGCTC 1 cut(s) 1050
SapI GCTCTTC 1 cut(s) 1470
SaqAI TTAA 4 cut(s) 306, 1155, 1181, 1536
SatI GCNGC 6 cut(s) 7, 365, 447, 674, 1317, 1568
Sau3AI GATC 8 cut(s) 64, 123, 220, 937, 967, 1090, 1381, 1474
Sau96I GGNCC 2 cut(s) 686, 816
ScrFI CCNGG 4 cut(s) 230, 262, 275, 857
SduI GDGCHC 5 cut(s) 23, 439, 1050, 1701, 1834
SfaNI GCATC 6 cut(s) 91, 310, 793, 1328, 1520, 1735
SfcI CTRYAG 4 cut(s) 480, 1058, 1565, 1671
SfoI GGCGCC 1 cut(s) 52
Sfr274I CTCGAG 2 cut(s) 438, 1499
SfuI TTCGAA 1 cut(s) 78
SinI GGWCC 1 cut(s) 816
SlaI CTCGAG 2 cut(s) 438, 1499
SmiMI CAYNNNNRTG 1 cut(s) 789
SmlI CTYRAG 6 cut(s) 438, 549, 903, 1387, 1499, 1694
SmoI CTYRAG 6 cut(s) 438, 549, 903, 1387, 1499, 1694
Sse9I AATT 6 cut(s) 59, 185, 505, 1184, 1242, 1504
SsiI CCGC 5 cut(s) 32, 373, 1272, 1702, 1756
SspDI GGCGCC 1 cut(s) 50
SspMI CTAG 7 cut(s) 38, 224, 527, 677, 971, 1163, 1199
SstI GAGCTC 1 cut(s) 1050
StyD4I CCNGG 4 cut(s) 228, 260, 273, 855
StyI CCWWGG 2 cut(s) 1616, 1734
TaaI ACNGT 5 cut(s) 18, 491, 695, 1116, 1355
TaiI ACGT 3 cut(s) 436, 793, 1743
TaqI TCGA 8 cut(s) 78, 106, 117, 439, 502, 719, 975, 1500
TaqII GACCGA 2 cut(s) 804, 1536
TasI AATT 6 cut(s) 59, 185, 505, 1184, 1242, 1504
TfiI GAWTC 3 cut(s) 632, 1247, 1561
Tru1I TTAA 4 cut(s) 306, 1155, 1181, 1536
Tru9I TTAA 4 cut(s) 306, 1155, 1181, 1536
TscAI CASTG 6 cut(s) 406, 665, 921, 1311, 1629, 1683
TseFI GTSAC 4 cut(s) 777, 1082, 1355, 1687
TseI GCWGC 6 cut(s) 6, 364, 446, 673, 1316, 1567
Tsp45I GTSAC 4 cut(s) 777, 1082, 1355, 1687
TspDTI ATGAA 5 cut(s) 530, 920, 1129, 1643, 1656
TspRI CASTG 6 cut(s) 406, 665, 921, 1311, 1629, 1683
VpaK11BI GGWCC 1 cut(s) 816
VspI ATTAAT 1 cut(s) 1536
XapI RAATTY 2 cut(s) 505, 1504
XbaI TCTAGA 1 cut(s) 223
XceI RCATGY 4 cut(s) 760, 965, 1194, 1216
XhoI CTCGAG 2 cut(s) 438, 1499
XmnI GAANNNNTTC 1 cut(s) 1136
XspI CTAG 7 cut(s) 38, 224, 527, 677, 971, 1163, 1199
Zsp2I ATGCAT 1 cut(s) 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.