Rorug06G0150500

HAUS augmin-like complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0005161
Physical Location & Seq
Reverse (-)
21524590 .. 21529132
4543 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0150500.1

Sequence Viewer

Length: 2157 bp
ATGAACCCACAGCCGCCGCCCCCGCCCCCGCCGCCCGATGTGTTCCTCAGTTCCGGAGGTAACGCCATGGGCAATCTCTACACTGCTCTGGTTGGAAAGGGCATATCTACAATTCGAGATAATGAAAATCTAGAGTTGGGATTTGGGCTTGGGCTGAGCTCAAAAAAGAAGAAAAAATTGTTTGAGAAGAGGTTGCTTCCACAACTCTGCACATCAATTGAAGAATCGAAGCTTGTGATTGTCATCATTTCAAGAAATTATCTGAATTCAAGGTGGTGCTTGGAGCAGCTTGCCAAGGCTGTTGAATGCAACAAACTAATACTCCCTGTTTTCGATGATGTGCATCCAAGTGAACTACGACTTCAAAACGGATCAGTTGCGGAAGCTTTCTTTAAGCACGAAAAAGCCTTTAAAGACAACCCAGACAAGGTGCGAAAATGGAGACGAGTTATTAATGGCGTAGCTGACTTGACTGGATGGGATTTACACCATAGCGATGAAACCCAAGTTATTGAAGCTATTGTTGAAAGAGTTTTTATTGAATTAAATGAACCTCTACTGGGATTATTTCTCTACTGCTCCCTCTTCCCAGAGGGTTACAAATTCAGGAAACAAGAGTTGGTTCAATTGTGGATAGCTCAAGGTTTTGATATGGGAGAGAGTCCCGGAGAGACAATGGAAGATGCCGGCATTGAGCATTTCAACACTTTGGAGAGTGAAGGCTTTTTTGTGCGCTCCGGAAGAGCTGATTTAAAAGTAGAATATGATGAGGTGATCACTGTGCCCTTTTATGTCACCCCCAGCTTCTTCTACAAAGTAAATCCTTCTAAGCTTTCACTTTTGGAAAACAATTGCTCCAGTGCTAAATATTGCAGAGTTGTGGATGGCAAGTTTGATGAAGCATCAGAATCAAGCACACAACATATGTCTTTGATTTATCAAGGCATTGATGAGATGGCTTTTGGTGTTATTCAGAAATTTAAGAATCTGCGCACCTTACTTCTTCTCGCTGGTTGTCAGTCTTCCATCAAATGTGTTCCTGCTGATTTTTTTTTGAGCTTAAAGTTTTTGAGTACACTGAATTTGAGTGGAATGCTCATTTCTAGATTGCCTGGTTCTATTGGAGATGTCAAGCCTTTACGATATATTGATCTCTCACGTACGCCTCTTTCCAGGTTGCCGGACTCTATCTGTTCTCTTGACCAGTTACAAACCTTGAAACTCAGAGGTTGTAATGACTTGTTTGATTTACCAGAAGACATGCACAAGCTAACTGCTCTACGACATCTCGATTTCAATATCGGTCAACAGTTGAGTGACATGCCTCCACACTTGGGAAGATTGAATCATATTCAAACCTTGTCAGCATTTCTTGTTGGTACTCTTGATGGGCACCGCATCCAAGAACTGAAGAATTTAAATGATCTTACAGGAGTGCTTTGCATTTTACAACTTGAAAATGTGTTGAGTATGAGAGATGCTAGGGAAGCAAATCTGGCTAGCAAAAAACACCTGCAGAGGTTGGATCTCCAATGGATTTCTCTATTTGCTGAAAATACAAAGCTGCAAGAGGACATCATTGATTCTCTTCGACCCCCTTCCACTCTTGAAGAATTAAATATATTATCTTATAGTGGGACAAAACTTCCATCTTGGTTGAGCCATCGGTCATTTGCTGACCTTATTGTGATTACCCTCAACAATTGTGCATACTGTGAACTTTTTCCATCTCTTGGTCAGTTACCAGCGCTGAAGTTTCTTTCTGTTGTAAGGATGCATGCCGTCAAAGAAATTGATCAGACATTTTTCAGAAGTGCCCATGAACCAGTTGATCAAGCAATCCAAGCATTTCCAAAACTCGAGATACTAGAAGTTGACACCATGCCTAATTTGAAAGAGTGGAAGGAAGTAAAAGAAGGTGATTTGCCATCACTTCTTCAACTCAAAATGGAGTGCTGTCCACAACTAGTCACTCTTCCATCATTTTTACACCTCAAATCCTTGAAGTATTTAAAGCTGATTGAATGCCCAAAGCTTGTGCTATCGGACCACAGTAAACTACCAACTTCACTAGAGTCTTTGTTAATAGGAGATAGCTGTGAACTGAAAAGTTGGTGCCGCAAGGAGGGAGATCAAGAATTGCAGCTGGAAAGATAA

Protein Analysis

718

Amino Acids

81.2

Weight (kDa)

5.81

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 66 - 183 2.7e-22 TIR domain
TIR_2 PF13676 67 - 124 1e-06 TIR domain
WHD_DRP PF23559 195 - 244 2.1e-12 Disease resistance protein Winged helix domain
LRR_14 PF23598 374 - 658 1.3e-23 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 467 - 592 2.3e-36 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1521
Acc16I TGCGCA 1 cut(s) 992
Acc36I ACCTGC 1 cut(s) 1521
AccB1I GGYRCC 2 cut(s) 1392, 2115
AccB7I CCANNNNNTGG 1 cut(s) 1733
AccIII TCCGGA 2 cut(s) 53, 737
AciI CCGC 8 cut(s) 14, 17, 23, 29, 32, 380, 1396, 2119
AclWI GGATC 2 cut(s) 379, 1533
AcsI RAATTY 5 cut(s) 265, 602, 977, 1081, 1414
AcuI CTGAAG 2 cut(s) 1430, 1772
AfaI GTAC 3 cut(s) 1075, 1162, 1381
AfeI AGCGCT 1 cut(s) 1749
AfiI CCNNNNNNNGG 5 cut(s) 427, 560, 1334, 1733, 2125
AhlI ACTAGT 1 cut(s) 1966
AjnI CCWGG 2 cut(s) 1111, 1172
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
Alw21I GWGCWC 1 cut(s) 161
Alw26I GTCTC 2 cut(s) 436, 665
AlwI GGATC 2 cut(s) 379, 1533
Ama87I CYCGRG 1 cut(s) 1859
Aor13HI TCCGGA 2 cut(s) 53, 737
Aor51HI AGCGCT 1 cut(s) 1749
ApeKI GCWGC 3 cut(s) 286, 1564, 2143
ApoI RAATTY 5 cut(s) 265, 602, 977, 1081, 1414
AseI ATTAAT 1 cut(s) 453
Asp700I GAANNNNTTC 1 cut(s) 1722
AspLEI GCGC 3 cut(s) 735, 993, 1750
AspS9I GGNCC 1 cut(s) 2047
AsuC2I CCSGG 1 cut(s) 666
AsuHPI GGTGA 3 cut(s) 784, 787, 1931
AsuNHI GCTAGC 1 cut(s) 1499
AvaI CYCGRG 1 cut(s) 1859
AvaII GGWCC 1 cut(s) 2047
BaeGI GKGCMC 3 cut(s) 786, 1395, 1819
BanI GGYRCC 2 cut(s) 1392, 2115
BanII GRGCYC 1 cut(s) 161
BbsI GAAGAC 2 cut(s) 1014, 1263
Bbv12I GWGCWC 1 cut(s) 161
BbvI GCAGC 2 cut(s) 298, 1551
BceAI ACGGC 1 cut(s) 1766
BciT130I CCWGG 2 cut(s) 1113, 1174
BclI TGATCA 3 cut(s) 774, 1795, 1831
BcnI CCSGG 1 cut(s) 666
BcoDI GTCTC 2 cut(s) 436, 665
BcuI ACTAGT 1 cut(s) 1966
BfaI CTAG 7 cut(s) 131, 1104, 1482, 1500, 1868, 1967, 2072
BfmI CTRYAG 1 cut(s) 1514
BfoI RGCGCY 1 cut(s) 1751
BfuAI ACCTGC 1 cut(s) 1521
BisI GCNGC 7 cut(s) 14, 17, 32, 287, 1565, 2119, 2144
BlpI GCTNAGC 1 cut(s) 155
BlsI GCNGC 7 cut(s) 15, 18, 33, 288, 1566, 2120, 2145
Bme1390I CCNGG 3 cut(s) 666, 1113, 1174
Bme18I GGWCC 1 cut(s) 2047
BmeT110I CYCGRG 1 cut(s) 1859
BmgT120I GGNCC 1 cut(s) 2047
BmiI GGNNCC 2 cut(s) 1394, 2117
BmrFI CCNGG 3 cut(s) 666, 1113, 1174
BmrI ACTGGG 1 cut(s) 569
BmsI GCATC 6 cut(s) 352, 673, 911, 1407, 1468, 1764
BmtI GCTAGC 1 cut(s) 1503
BmuI ACTGGG 1 cut(s) 569
BpiI GAAGAC 2 cut(s) 1014, 1263
BpmI CTGGAG 1 cut(s) 841
Bpu1102I GCTNAGC 1 cut(s) 155
BpuEI CTTGAG 1 cut(s) 624
BpuMI CCSGG 1 cut(s) 666
BsaAI YACGTR 1 cut(s) 1160
BsaBI GATNNNNATC 2 cut(s) 242, 342
BsaJI CCNNGG 2 cut(s) 66, 294
BsaWI WCCGGW 2 cut(s) 53, 737
BsaXI ACNNNNNCTCC 4 cut(s) 306, 336, 839, 869
Bsc4I CCNNNNNNNGG 5 cut(s) 427, 560, 1334, 1733, 2125
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 5 cut(s) 478, 564, 858, 1204, 1826
Bse8I GATNNNNATC 2 cut(s) 242, 342
BseAI TCCGGA 2 cut(s) 53, 737
BseBI CCWGG 2 cut(s) 1113, 1174
BseDI CCNNGG 2 cut(s) 66, 294
BseGI GGATG 5 cut(s) 343, 482, 889, 1398, 1779
BseJI GATNNNNATC 2 cut(s) 242, 342
BseLI CCNNNNNNNGG 5 cut(s) 427, 560, 1334, 1733, 2125
BseMII CTCAG 3 cut(s) 61, 146, 1237
BseNI ACTGG 5 cut(s) 478, 564, 858, 1204, 1826
BseSI GKGCMC 3 cut(s) 786, 1395, 1819
BseXI GCAGC 2 cut(s) 298, 1551
BseYI CCCAGC 1 cut(s) 800
BsgI GTGCAG 1 cut(s) 193
BshNI GGYRCC 2 cut(s) 1392, 2115
BsiHKAI GWGCWC 1 cut(s) 161
BsiHKCI CYCGRG 1 cut(s) 1859
BsiSI CCGG 5 cut(s) 54, 666, 687, 738, 1181
BsiWI CGTACG 1 cut(s) 1160
BslFI GGGAC 2 cut(s) 648, 1651
BslI CCNNNNNNNGG 5 cut(s) 427, 560, 1334, 1733, 2125
BsmAI GTCTC 2 cut(s) 436, 665
BsmBI CGTCTC 1 cut(s) 436
BsmFI GGGAC 2 cut(s) 648, 1651
BsmI GAATGC 3 cut(s) 311, 1098, 2030
BsoBI CYCGRG 1 cut(s) 1859
Bsp1286I GDGCHC 4 cut(s) 161, 786, 1395, 1819
Bsp13I TCCGGA 2 cut(s) 53, 737
Bsp143I GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
Bsp1720I GCTNAGC 1 cut(s) 155
Bsp19I CCATGG 1 cut(s) 66
BspACI CCGC 8 cut(s) 14, 17, 23, 29, 32, 380, 1396, 2119
BspCNI CTCAG 3 cut(s) 60, 147, 1236
BspEI TCCGGA 2 cut(s) 53, 737
BspLI GGNNCC 2 cut(s) 1394, 2117
BspMAI CTGCAG 1 cut(s) 1518
BspMI ACCTGC 1 cut(s) 1521
BspOI GCTAGC 1 cut(s) 1503
BspPI GGATC 2 cut(s) 379, 1533
BspQI GCTCTTC 1 cut(s) 736
BspT107I GGYRCC 2 cut(s) 1392, 2115
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 5 cut(s) 478, 564, 858, 1204, 1826
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 2 cut(s) 66, 294
BssMI GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
BssT1I CCWWGG 2 cut(s) 66, 294
Bst2UI CCWGG 2 cut(s) 1113, 1174
Bst4CI ACNGT 4 cut(s) 781, 1311, 1715, 2054
Bst6I CTCTTC 5 cut(s) 182, 590, 736, 1593, 1980
BstBAI YACGTR 1 cut(s) 1160
BstC8I GCNNGC 4 cut(s) 291, 688, 1501, 1779
BstDEI CTNAG 4 cut(s) 47, 155, 828, 1223
BstDSI CCRYGG 1 cut(s) 66
BstF5I GGATG 5 cut(s) 343, 482, 889, 1398, 1779
BstH2I RGCGCY 1 cut(s) 1751
BstHHI GCGC 3 cut(s) 735, 993, 1750
BstKTI GATC 8 cut(s) 374, 777, 1153, 1426, 1528, 1798, 1834, 2134
BstMAI GTCTC 2 cut(s) 436, 665
BstMBI GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
BstMWI GCNNNNNNNGC 5 cut(s) 22, 31, 1487, 1496, 1844
BstNI CCWGG 2 cut(s) 1113, 1174
BstNSI RCATGY 3 cut(s) 1264, 1324, 1781
BstSCI CCNGG 3 cut(s) 664, 1111, 1172
BstSFI CTRYAG 1 cut(s) 1514
BstSLI GKGCMC 3 cut(s) 786, 1395, 1819
BstV1I GCAGC 2 cut(s) 298, 1551
BstV2I GAAGAC 2 cut(s) 1014, 1263
BstX2I RGATCY 1 cut(s) 1525
BstYI RGATCY 1 cut(s) 1525
BtgI CCRYGG 1 cut(s) 66
BtgZI GCGATG 1 cut(s) 510
BtsCI GGATG 5 cut(s) 343, 482, 889, 1398, 1779
BtsI GCAGTG 1 cut(s) 81
BtsIMutI CAGTG 4 cut(s) 81, 777, 865, 1076
BveI ACCTGC 1 cut(s) 1521
Cac8I GCNNGC 4 cut(s) 291, 688, 1501, 1779
CfoI GCGC 3 cut(s) 735, 993, 1750
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 1 cut(s) 2047
Csp6I GTAC 3 cut(s) 1074, 1161, 1380
CviAII CATG 6 cut(s) 67, 1261, 1321, 1778, 1820, 1882
CviQI GTAC 3 cut(s) 1074, 1161, 1380
DdeI CTNAG 4 cut(s) 47, 155, 828, 1223
DpnI GATC 8 cut(s) 373, 776, 1152, 1425, 1527, 1797, 1833, 2133
DpnII GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
DraI TTTAAA 4 cut(s) 412, 753, 1419, 2013
Eam1104I CTCTTC 5 cut(s) 182, 590, 736, 1593, 1980
EarI CTCTTC 5 cut(s) 182, 590, 736, 1593, 1980
Ecl136II GAGCTC 1 cut(s) 159
Eco130I CCWWGG 2 cut(s) 66, 294
Eco24I GRGCYC 1 cut(s) 161
Eco47I GGWCC 1 cut(s) 2047
Eco47III AGCGCT 1 cut(s) 1749
Eco53kI GAGCTC 1 cut(s) 159
Eco57I CTGAAG 2 cut(s) 1430, 1772
Eco88I CYCGRG 1 cut(s) 1859
EcoICRI GAGCTC 1 cut(s) 159
EcoRI GAATTC 1 cut(s) 265
EcoRII CCWGG 2 cut(s) 1111, 1172
EcoT14I CCWWGG 2 cut(s) 66, 294
EcoT22I ATGCAT 1 cut(s) 1779
EcoT38I GRGCYC 1 cut(s) 161
ErhI CCWWGG 2 cut(s) 66, 294
Esp3I CGTCTC 1 cut(s) 436
FaeI CATG 6 cut(s) 70, 1264, 1324, 1781, 1823, 1885
FaqI GGGAC 2 cut(s) 648, 1651
FatI CATG 6 cut(s) 66, 1260, 1320, 1777, 1819, 1881
FauI CCCGC 2 cut(s) 30, 36
FauNDI CATATG 1 cut(s) 924
FbaI TGATCA 3 cut(s) 774, 1795, 1831
Fnu4HI GCNGC 7 cut(s) 14, 17, 32, 287, 1565, 2119, 2144
FokI GGATG 5 cut(s) 330, 489, 896, 1385, 1786
FriOI GRGCYC 1 cut(s) 161
Fsp4HI GCNGC 7 cut(s) 14, 17, 32, 287, 1565, 2119, 2144
FspBI CTAG 7 cut(s) 131, 1104, 1482, 1500, 1868, 1967, 2072
FspI TGCGCA 1 cut(s) 992
GlaI GCGC 3 cut(s) 734, 992, 1749
GluI GCNGC 7 cut(s) 14, 17, 32, 287, 1565, 2119, 2144
GsaI CCCAGC 1 cut(s) 804
GsuI CTGGAG 1 cut(s) 841
HaeII RGCGCY 1 cut(s) 1751
HapII CCGG 5 cut(s) 54, 666, 687, 738, 1181
HhaI GCGC 3 cut(s) 735, 993, 1750
Hin1II CATG 6 cut(s) 70, 1264, 1324, 1781, 1823, 1885
Hin6I GCGC 3 cut(s) 733, 991, 1748
HinP1I GCGC 3 cut(s) 733, 991, 1748
HincII GTYRAC 2 cut(s) 1307, 1876
HindII GTYRAC 2 cut(s) 1307, 1876
HindIII AAGCTT 4 cut(s) 230, 384, 830, 2033
HinfI GANTC 8 cut(s) 224, 661, 908, 985, 1184, 1345, 1583, 2075
HpaII CCGG 5 cut(s) 54, 666, 687, 738, 1181
HphI GGTGA 3 cut(s) 784, 787, 1931
Hpy166II GTNNAC 8 cut(s) 353, 1076, 1307, 1718, 1876, 1961, 2057, 2102
Hpy188I TCNGA 7 cut(s) 264, 907, 975, 1226, 1800, 1811, 2047
Hpy8I GTNNAC 8 cut(s) 353, 1076, 1307, 1718, 1876, 1961, 2057, 2102
HpyAV CCTTC 5 cut(s) 713, 834, 1608, 1897, 1910
HpyCH4III ACNGT 4 cut(s) 781, 1311, 1715, 2054
HpyCH4IV ACGT 1 cut(s) 1159
HpyF10VI GCNNNNNNNGC 5 cut(s) 22, 31, 1487, 1496, 1844
HpyF3I CTNAG 4 cut(s) 47, 155, 828, 1223
HpySE526I ACGT 1 cut(s) 1159
Hsp92II CATG 6 cut(s) 70, 1264, 1324, 1781, 1823, 1885
HspAI GCGC 3 cut(s) 733, 991, 1748
Kpn2I TCCGGA 2 cut(s) 53, 737
KroI GCCGGC 1 cut(s) 686
KroNI GCCGGC 1 cut(s) 688
Ksp22I TGATCA 3 cut(s) 774, 1795, 1831
Kzo9I GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
LguI GCTCTTC 1 cut(s) 736
LmnI GCTCC 4 cut(s) 283, 584, 740, 860
Lsp1109I GCAGC 2 cut(s) 298, 1551
LweI GCATC 6 cut(s) 352, 673, 911, 1407, 1468, 1764
MaeI CTAG 7 cut(s) 131, 1104, 1482, 1500, 1868, 1967, 2072
MaeII ACGT 1 cut(s) 1159
MaeIII GTNAC 7 cut(s) 59, 596, 793, 1206, 1316, 1740, 1969
MalI GATC 8 cut(s) 373, 776, 1152, 1425, 1527, 1797, 1833, 2133
MboI GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
MfeI CAATTG 4 cut(s) 216, 626, 850, 1702
MflI RGATCY 1 cut(s) 1525
MhlI GDGCHC 4 cut(s) 161, 786, 1395, 1819
MlyI GAGTC 3 cut(s) 670, 1178, 2084
MmeI TCCRAC 2 cut(s) 73, 1503
Mph1103I ATGCAT 1 cut(s) 1779
MroI TCCGGA 2 cut(s) 53, 737
MroNI GCCGGC 1 cut(s) 686
MroXI GAANNNNTTC 1 cut(s) 1722
MslI CAYNNNNRTG 2 cut(s) 348, 495
MspA1I CMGCKG 1 cut(s) 2146
MspI CCGG 5 cut(s) 54, 666, 687, 738, 1181
MspR9I CCNGG 3 cut(s) 666, 1113, 1174
MunI CAATTG 4 cut(s) 216, 626, 850, 1702
Mva1269I GAATGC 3 cut(s) 311, 1098, 2030
MvaI CCWGG 2 cut(s) 1113, 1174
MwoI GCNNNNNNNGC 5 cut(s) 22, 31, 1487, 1496, 1844
NaeI GCCGGC 1 cut(s) 688
NciI CCSGG 1 cut(s) 666
NcoI CCATGG 1 cut(s) 66
NdeI CATATG 1 cut(s) 924
NdeII GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
NgoMIV GCCGGC 1 cut(s) 686
NheI GCTAGC 1 cut(s) 1499
NlaIII CATG 6 cut(s) 70, 1264, 1324, 1781, 1823, 1885
NlaIV GGNNCC 2 cut(s) 1394, 2117
NmuCI GTSAC 3 cut(s) 793, 1316, 1969
NsbI TGCGCA 1 cut(s) 992
NsiI ATGCAT 1 cut(s) 1779
NspI RCATGY 3 cut(s) 1264, 1324, 1781
PaeI GCATGC 1 cut(s) 1781
PaeR7I CTCGAG 1 cut(s) 1859
PaqCI CACCTGC 1 cut(s) 1521
PciSI GCTCTTC 1 cut(s) 736
PctI GAATGC 3 cut(s) 311, 1098, 2030
PdiI GCCGGC 1 cut(s) 688
PdmI GAANNNNTTC 1 cut(s) 1722
PfeI GAWTC 5 cut(s) 224, 908, 985, 1345, 1583
Pfl23II CGTACG 1 cut(s) 1160
PflMI CCANNNNNTGG 1 cut(s) 1733
PfoI TCCNGGA 1 cut(s) 664
PkrI GCNGC 7 cut(s) 15, 18, 33, 288, 1566, 2120, 2145
PleI GAGTC 3 cut(s) 669, 1178, 2083
PpsI GAGTC 3 cut(s) 669, 1178, 2083
Ppu21I YACGTR 1 cut(s) 1160
PshBI ATTAAT 1 cut(s) 453
Psp124BI GAGCTC 1 cut(s) 161
Psp6I CCWGG 2 cut(s) 1111, 1172
PspFI CCCAGC 1 cut(s) 800
PspGI CCWGG 2 cut(s) 1111, 1172
PspLI CGTACG 1 cut(s) 1160
PspN4I GGNNCC 2 cut(s) 1394, 2117
PspPI GGNCC 1 cut(s) 2047
PstI CTGCAG 1 cut(s) 1518
PsuI RGATCY 1 cut(s) 1525
PvuII CAGCTG 1 cut(s) 2146
RsaI GTAC 3 cut(s) 1075, 1162, 1381
RsaNI GTAC 3 cut(s) 1074, 1161, 1380
RseI CAYNNNNRTG 2 cut(s) 348, 495
SacI GAGCTC 1 cut(s) 161
SapI GCTCTTC 1 cut(s) 736
SatI GCNGC 7 cut(s) 14, 17, 32, 287, 1565, 2119, 2144
Sau3AI GATC 8 cut(s) 371, 774, 1150, 1423, 1525, 1795, 1831, 2131
Sau96I GGNCC 1 cut(s) 2047
SchI GAGTC 3 cut(s) 670, 1178, 2084
ScrFI CCNGG 3 cut(s) 666, 1113, 1174
SduI GDGCHC 4 cut(s) 161, 786, 1395, 1819
SfaNI GCATC 6 cut(s) 352, 673, 911, 1407, 1468, 1764
SfcI CTRYAG 1 cut(s) 1514
Sfr274I CTCGAG 1 cut(s) 1859
SinI GGWCC 1 cut(s) 2047
SlaI CTCGAG 1 cut(s) 1859
SmiI ATTTAAAT 1 cut(s) 1419
SmiMI CAYNNNNRTG 2 cut(s) 348, 495
SmlI CTYRAG 2 cut(s) 639, 1859
SmoI CTYRAG 2 cut(s) 639, 1859
SpeI ACTAGT 1 cut(s) 1966
SphI GCATGC 1 cut(s) 1781
SsiI CCGC 8 cut(s) 14, 17, 23, 29, 32, 380, 1396, 2119
SspI AATATT 1 cut(s) 869
SspMI CTAG 7 cut(s) 131, 1104, 1482, 1500, 1868, 1967, 2072
SstI GAGCTC 1 cut(s) 161
StyD4I CCNGG 3 cut(s) 664, 1111, 1172
StyI CCWWGG 2 cut(s) 66, 294
SwaI ATTTAAAT 1 cut(s) 1419
TaaI ACNGT 4 cut(s) 781, 1311, 1715, 2054
TaiI ACGT 1 cut(s) 1162
TaqI TCGA 6 cut(s) 115, 227, 333, 1290, 1591, 1860
TaqII GACCGA 2 cut(s) 1292, 1656
TatI WGTACW 1 cut(s) 1073
TauI GCSGC 4 cut(s) 16, 19, 34, 2121
TfiI GAWTC 5 cut(s) 224, 908, 985, 1345, 1583
TscAI CASTG 4 cut(s) 88, 784, 865, 1083
TseFI GTSAC 3 cut(s) 793, 1316, 1969
TseI GCWGC 3 cut(s) 286, 1564, 2143
Tsp45I GTSAC 3 cut(s) 793, 1316, 1969
TspDTI ATGAA 6 cut(s) 17, 138, 513, 564, 912, 1836
TspGWI ACGGA 1 cut(s) 384
TspRI CASTG 4 cut(s) 88, 784, 865, 1083
Van91I CCANNNNNTGG 1 cut(s) 1733
VpaK11BI GGWCC 1 cut(s) 2047
VspI ATTAAT 1 cut(s) 453
XapI RAATTY 5 cut(s) 265, 602, 977, 1081, 1414
XbaI TCTAGA 2 cut(s) 130, 1103
XceI RCATGY 3 cut(s) 1264, 1324, 1781
XhoI CTCGAG 1 cut(s) 1859
XmnI GAANNNNTTC 1 cut(s) 1722
XspI CTAG 7 cut(s) 131, 1104, 1482, 1500, 1868, 1967, 2072
Zsp2I ATGCAT 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.