Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000159.1

Orthogroup ID

OG0005161

Physical Location & Seq

Genomic Coordinates Reverse (-)

269300 .. 276742

Gene Structure 7443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000159.1_g000055.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

atgagcggagccacactgtgcgcactgttgggcgatttggggtacgaaggcgccgatgcattggaccccgacagtttcgaatggccttttcaatacgacgacgctcgacctattctcgattgggtctgctccagcctccgcccctctaacgttctgtccctcaccgagctctctcggtacgagcagtttttacaggagggaaagctcttggagggggaagatttggactttgcttatgatagcatttctgccttttcttccagccgagacaaccaggaggcggttttcgcagctgaagagggactcaaagatattcgggatgcaactctggcatataaatctgaagctttacagttgcagaagcagcttagacatctggattctcaatttgacatgcttactggtcaagcttctgctttgatccaaggtagacgggctcgagttgctacaacatctactattaatggacaccttactaccatagatgacaccctttctgcaaaaaatttgcagatgaatgcagttcttggaaggattgcgtctacagcacaggaattggctcattatcactctggggatggggatggaatctatttagcatattcagactttcatccgtacttgcttggagattcatcctgtataaaggacctcaatcagtggtttgccaagcagttggacacgggcccctttcgtttagttgctgaagatggaaagtccaagtgttcgtgggtgagtcttgaagacatctccaatatcattgtgagagatttagaaaaatcccagcatcaacgtgtctcagaattgcaacgactgcgttctatttttgggacaagtgaaagacaatgggtggaagctcaagttgagaatgctaagcaacaagctattctaatgtcacttaaatctcaagtttcatcagatgaagcgcacattcatcttgatcttcattcccttaggaggaaacattcggaacttgtcggagaactatcaaattcttataacaaggaagagaaattgttatctgagactattccggatctttgttgggagctggctcaactccaagacacatacatattgcaaggcgattatgacttaaaggtcatgcgacaagagtactatatcaaccggcagaaagcgtttataaatcatcttgtcaatcaacttgcgaggcaccaactgttaaagttagcttgccagttggaaaagaaacacatgcttggagcatattcgttgctgaaagttattgaatcagaggtgcaagcctacctgtcagcaactgaaggccgtgtgggtcgttgcctagccctaatccaagctgcatctgatgtacaagaacaaggaggcgtggatgatcaagatcactttttgcatggcgttagagatcttttgagtatccattcaaatgctcaagctgggttgtcaacatatgtatcagctccgggtattgtgcagcaaatatctagtcttcattcagatttgatgacccttgagtcggatcttgagacctctcttccagaggacagaagcagatgtgtcaacgagctgtgcactctaattcagagtttgcagaaattgctgtttgcatcttcaacaactgcacaaccaatactgacatctcggccattgatgaaagagcttgatgaaatggagaaaataaatgcaaaactctcagctgcagttgaagaggtgacactagagcatcgtaagaaaaatgagatagttaaacaccactcccaagaagttgggcttcaacggggtgtgtttgttgatttcttctgcaatcctgagcgtttgaggagtcaagttcgggagctaactgcacgagtcagagctttgcaggtttcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005819 GO:0005856 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0008150 GO:0009524 GO:0009987 GO:0015630 GO:0016043 GO:0022402 GO:0022607 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0051225 GO:0070925 GO:0071840 GO:0080175

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS-augmin3

Protein Analysis

616

Amino Acids

69.23

Weight (kDa)

5.24

Isoelectric Point (pI)

43.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005161)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48520 AT5G48520
fragaria_vesca	FvH4_2g17860 FvH4_2g17860 FvH4_2g17860 FvH4_2g17860
malus_domestica	MD10G1152500.v1.1
prunus_persica	Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1 Prupe.8G191000_v2.0.a1
pyrus_communis	pycom10g13150
rosa_chinensis	RchiOBHm_Chr6g0282881
rosa_laevigata	RLG00000012859
rosa_multiflora	Rmu_sc0000159.1_g000055
rosa_roxburghii	Rroxscaffold_7G00185880
rosa_rugosa	Rorug06G0150400 Rorug06G0150500
rosa_samantha	Rh6BG266600 Rh6CG265800 Rh6DG258400
rosa_wichuraiana	Rw6G022770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	999, 1145
AasI	GACNNNNNNGTC	2 cut(s)	1100, 1492
Acc16I	TGCGCA	1 cut(s)	22
Acc36I	ACCTGC	1 cut(s)	1831
AccB1I	GGYRCC	2 cut(s)	50, 1173
AccBSI	CCGCTC	1 cut(s)	6
AccI	GTMKAC	2 cut(s)	430, 542
AccIII	TCCGGA	1 cut(s)	1033
AciI	CCGC	3 cut(s)	6, 139, 281
AclI	AACGTT	1 cut(s)	150
AclWI	GGATC	3 cut(s)	415, 1044, 1506
AcoI	YGGCCR	1 cut(s)	1622
AcsI	RAATTY	2 cut(s)	505, 991
AcuI	CTGAAG	4 cut(s)	315, 363, 726, 1302
AcyI	GRCGYC	1 cut(s)	51
AdeI	CACNNNGTG	1 cut(s)	18
AfaI	GTAC	5 cut(s)	44, 179, 620, 1118, 1332
AfiI	CCNNNNNNNGG	3 cut(s)	280, 957, 1495
AflIII	ACRYGT	1 cut(s)	793
AgsI	TTSAA	7 cut(s)	92, 743, 1250, 1404, 1593, 1685, 1754
AjnI	CCWGG	1 cut(s)	273
Alw21I	GWGCWC	2 cut(s)	171, 1553
Alw26I	GTCTC	4 cut(s)	261, 802, 1019, 1499
Alw44I	GTGCAC	1 cut(s)	1549
AlwI	GGATC	3 cut(s)	415, 1044, 1506
AlwNI	CAGNNNCTG	1 cut(s)	1280
Ama87I	CYCGRG	1 cut(s)	438
Aor13HI	TCCGGA	1 cut(s)	1033
AoxI	GGCC	4 cut(s)	83, 685, 1285, 1622
ApaI	GGGCCC	1 cut(s)	689
ApaLI	GTGCAC	1 cut(s)	1549
ApeKI	GCWGC	5 cut(s)	290, 364, 1319, 1453, 1676
ApoI	RAATTY	2 cut(s)	505, 991
ArsI	GACNNNNNNTTYG	2 cut(s)	1450, 1482
AseI	ATTAAT	1 cut(s)	462
AspLEI	GCGC	3 cut(s)	23, 53, 928
AspS9I	GGNCC	4 cut(s)	64, 649, 685, 686
AsuC2I	CCSGG	1 cut(s)	1443
AsuHPI	GGTGA	3 cut(s)	154, 745, 1702
AsuII	TTCGAA	1 cut(s)	78
AvaI	CYCGRG	1 cut(s)	438
AvaII	GGWCC	2 cut(s)	64, 649
AxyI	CCTNAGG	1 cut(s)	953
BaeGI	GKGCMC	2 cut(s)	689, 1553
BaeI	ACNNNNGTAYC	2 cut(s)	1416, 1449
BanI	GGYRCC	2 cut(s)	50, 1173
BanII	GRGCYC	3 cut(s)	171, 439, 689
BauI	CACGAG	1 cut(s)	1824
BbsI	GAAGAC	2 cut(s)	750, 1460
Bbv12I	GWGCWC	2 cut(s)	171, 1553
BbvI	GCAGC	5 cut(s)	302, 376, 1306, 1465, 1663
BccI	CCATC	3 cut(s)	572, 578, 704
BceAI	ACGGC	1 cut(s)	1272
BciT130I	CCWGG	1 cut(s)	275
BciVI	GTATCC	1 cut(s)	1406
BclI	TGATCA	1 cut(s)	1354
BcnI	CCSGG	1 cut(s)	1443
BcoDI	GTCTC	4 cut(s)	261, 802, 1019, 1499
BfaI	CTAG	3 cut(s)	1304, 1464, 1697
BfmI	CTRYAG	2 cut(s)	543, 1677
BfoI	RGCGCY	1 cut(s)	54
BfuAI	ACCTGC	1 cut(s)	1831
BfuI	GTATCC	1 cut(s)	1406
BglII	AGATCT	1 cut(s)	1384
BisI	GCNGC	5 cut(s)	291, 365, 1320, 1454, 1677
BlpI	GCTNAGC	1 cut(s)	873
BlsI	GCNGC	5 cut(s)	292, 366, 1321, 1455, 1678
BmcAI	AGTACT	1 cut(s)	1118
Bme1390I	CCNGG	2 cut(s)	275, 1443
Bme18I	GGWCC	2 cut(s)	64, 649
BmeT110I	CYCGRG	1 cut(s)	438
BmgT120I	GGNCC	4 cut(s)	64, 649, 685, 686
BmiI	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1175
BmrFI	CCNGG	2 cut(s)	275, 1443
BmsI	GCATC	6 cut(s)	46, 310, 796, 1331, 1595, 1711
BpiI	GAAGAC	2 cut(s)	750, 1460
BpmI	CTGGAG	1 cut(s)	115
Bpu10I	CCTNAGC	1 cut(s)	1788
Bpu1102I	GCTNAGC	1 cut(s)	873
Bpu14I	TTCGAA	1 cut(s)	78
BpuEI	CTTGAG	5 cut(s)	843, 891, 1395, 1511, 1523
BpuMI	CCSGG	1 cut(s)	1443
BsaBI	GATNNNNATC	1 cut(s)	1359
BsaHI	GRCGYC	1 cut(s)	51
BsaI	GGTCTC	1 cut(s)	1499
BsaJI	CCNNGG	1 cut(s)	424
BsaWI	WCCGGW	1 cut(s)	1033
Bsc4I	CCNNNNNNNGG	3 cut(s)	280, 957, 1495
Bse118I	RCCGGY	1 cut(s)	1128
Bse1I	ACTGG	2 cut(s)	406, 1198
Bse21I	CCTNAGG	1 cut(s)	953
Bse8I	GATNNNNATC	1 cut(s)	1359
BseAI	TCCGGA	1 cut(s)	1033
BseBI	CCWGG	1 cut(s)	275
BseDI	CCNNGG	1 cut(s)	424
BseGI	GGATG	6 cut(s)	325, 583, 589, 613, 635, 1357
BseJI	GATNNNNATC	1 cut(s)	1359
BseLI	CCNNNNNNNGG	3 cut(s)	280, 957, 1495
BseMII	CTCAG	4 cut(s)	813, 1014, 1686, 1779
BseNI	ACTGG	2 cut(s)	406, 1198
BseRI	GAGGAG	1 cut(s)	1813
BseSI	GKGCMC	2 cut(s)	689, 1553
BseXI	GCAGC	5 cut(s)	302, 376, 1306, 1465, 1663
BseYI	CCCAGC	2 cut(s)	783, 1415
BsgI	GTGCAG	3 cut(s)	1472, 1584, 1806
BshFI	GGCC	4 cut(s)	85, 687, 1287, 1624
BshNI	GGYRCC	2 cut(s)	50, 1173
BsiHKAI	GWGCWC	2 cut(s)	171, 1553
BsiHKCI	CYCGRG	1 cut(s)	438
BsiSI	CCGG	3 cut(s)	1034, 1129, 1442
BslFI	GGGAC	3 cut(s)	142, 315, 844
BslI	CCNNNNNNNGG	3 cut(s)	280, 957, 1495
BsmAI	GTCTC	4 cut(s)	261, 802, 1019, 1499
BsmFI	GGGAC	3 cut(s)	142, 315, 844
BsmI	GAATGC	2 cut(s)	523, 874
BsnI	GGCC	4 cut(s)	85, 687, 1287, 1624
Bso31I	GGTCTC	1 cut(s)	1499
BsoBI	CYCGRG	1 cut(s)	438
Bsp119I	TTCGAA	1 cut(s)	78
Bsp120I	GGGCCC	1 cut(s)	685
Bsp1286I	GDGCHC	4 cut(s)	171, 439, 689, 1553
Bsp13I	TCCGGA	1 cut(s)	1033
Bsp1407I	TGTACA	1 cut(s)	1330
Bsp143I	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
Bsp1720I	GCTNAGC	1 cut(s)	873
BspACI	CCGC	3 cut(s)	6, 139, 281
BspANI	GGCC	4 cut(s)	85, 687, 1287, 1624
BspCNI	CTCAG	4 cut(s)	812, 1015, 1685, 1780
BspEI	TCCGGA	1 cut(s)	1033
BspLI	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1175
BspMAI	CTGCAG	1 cut(s)	1681
BspMI	ACCTGC	1 cut(s)	1831
BspPI	GGATC	3 cut(s)	415, 1044, 1506
BspT104I	TTCGAA	1 cut(s)	78
BspT107I	GGYRCC	2 cut(s)	50, 1173
BspTNI	GGTCTC	1 cut(s)	1499
BsrBI	CCGCTC	1 cut(s)	6
BsrFI	RCCGGY	1 cut(s)	1128
BsrGI	TGTACA	1 cut(s)	1330
BsrI	ACTGG	2 cut(s)	406, 1198
BssAI	RCCGGY	1 cut(s)	1128
BssECI	CCNNGG	1 cut(s)	424
BssMI	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
BssNI	GRCGYC	1 cut(s)	51
BssSI	CACGAG	1 cut(s)	1824
BssT1I	CCWWGG	1 cut(s)	424
Bst2BI	CACGAG	1 cut(s)	1824
Bst2UI	CCWGG	1 cut(s)	275
Bst4CI	ACNGT	5 cut(s)	18, 27, 74, 354, 1182
Bst6I	CTCTTC	4 cut(s)	291, 1002, 1518, 1680
BstACI	GRCGYC	1 cut(s)	51
BstAPI	GCANNNNNTGC	2 cut(s)	814, 1576
BstAUI	TGTACA	1 cut(s)	1330
BstBI	TTCGAA	1 cut(s)	78
BstC8I	GCNNGC	3 cut(s)	1053, 1195, 1263
BstDEI	CTNAG	7 cut(s)	368, 799, 873, 953, 1023, 1672, 1788
BstF5I	GGATG	6 cut(s)	325, 583, 589, 613, 635, 1357
BstH2I	RGCGCY	1 cut(s)	54
BstHHI	GCGC	3 cut(s)	23, 53, 928
BstKTI	GATC	7 cut(s)	423, 943, 1039, 1357, 1363, 1387, 1501
BstMAI	GTCTC	4 cut(s)	261, 802, 1019, 1499
BstMBI	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
BstMWI	GCNNNNNNNGC	7 cut(s)	287, 329, 364, 443, 545, 814, 1576
BstNI	CCWGG	1 cut(s)	275
BstNSI	RCATGY	2 cut(s)	397, 1219
BstSCI	CCNGG	2 cut(s)	273, 1441
BstSFI	CTRYAG	2 cut(s)	543, 1677
BstSLI	GKGCMC	2 cut(s)	689, 1553
BstV1I	GCAGC	5 cut(s)	302, 376, 1306, 1465, 1663
BstV2I	GAAGAC	2 cut(s)	750, 1460
BstX2I	RGATCY	3 cut(s)	1036, 1384, 1498
BstXI	CCANNNNNNTGG	2 cut(s)	676, 1745
BstYI	RGATCY	3 cut(s)	1036, 1384, 1498
Bsu36I	CCTNAGG	1 cut(s)	953
BsuI	GTATCC	1 cut(s)	1406
BsuRI	GGCC	4 cut(s)	85, 687, 1287, 1624
BtsCI	GGATG	6 cut(s)	325, 583, 589, 613, 635, 1357
BtsIMutI	CAGTG	3 cut(s)	14, 23, 665
BveI	ACCTGC	1 cut(s)	1831
Cac8I	GCNNGC	3 cut(s)	1053, 1195, 1263
CaiI	CAGNNNCTG	1 cut(s)	1280
CfoI	GCGC	3 cut(s)	23, 53, 928
Cfr10I	RCCGGY	1 cut(s)	1128
Cfr13I	GGNCC	4 cut(s)	64, 649, 685, 686
CseI	GACGC	2 cut(s)	110, 528
Csp6I	GTAC	5 cut(s)	43, 178, 619, 1117, 1331
CviAII	CATG	4 cut(s)	394, 1105, 1216, 1373
CviQI	GTAC	5 cut(s)	43, 178, 619, 1117, 1331
DdeI	CTNAG	7 cut(s)	368, 799, 873, 953, 1023, 1672, 1788
DinI	GGCGCC	1 cut(s)	52
DpnI	GATC	7 cut(s)	422, 942, 1038, 1356, 1362, 1386, 1500
DpnII	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
DraIII	CACNNNGTG	1 cut(s)	18
DrdI	GACNNNNNNGTC	2 cut(s)	1100, 1492
DseDI	GACNNNNNNGTC	2 cut(s)	1100, 1492
EaeI	YGGCCR	1 cut(s)	1622
Eam1104I	CTCTTC	4 cut(s)	291, 1002, 1518, 1680
EarI	CTCTTC	4 cut(s)	291, 1002, 1518, 1680
EciI	GGCGGA	1 cut(s)	128
Ecl136II	GAGCTC	1 cut(s)	169
Eco130I	CCWWGG	1 cut(s)	424
Eco24I	GRGCYC	3 cut(s)	171, 439, 689
Eco31I	GGTCTC	1 cut(s)	1499
Eco47I	GGWCC	2 cut(s)	64, 649
Eco53kI	GAGCTC	1 cut(s)	169
Eco57I	CTGAAG	4 cut(s)	315, 363, 726, 1302
Eco81I	CCTNAGG	1 cut(s)	953
Eco88I	CYCGRG	1 cut(s)	438
EcoICRI	GAGCTC	1 cut(s)	169
EcoO109I	RGGNCCY	2 cut(s)	649, 686
EcoRII	CCWGG	1 cut(s)	273
EcoT14I	CCWWGG	1 cut(s)	424
EcoT22I	ATGCAT	1 cut(s)	61
EcoT38I	GRGCYC	3 cut(s)	171, 439, 689
EgeI	GGCGCC	1 cut(s)	52
EheI	GGCGCC	1 cut(s)	52
ErhI	CCWWGG	1 cut(s)	424
FaeI	CATG	4 cut(s)	397, 1108, 1219, 1376
FalI	AAGNNNNNCTT	2 cut(s)	1734, 1766
FaqI	GGGAC	3 cut(s)	142, 315, 844
FatI	CATG	4 cut(s)	393, 1104, 1215, 1372
FauNDI	CATATG	1 cut(s)	1429
FbaI	TGATCA	1 cut(s)	1354
FblI	GTMKAC	2 cut(s)	430, 542
Fnu4HI	GCNGC	5 cut(s)	291, 365, 1320, 1454, 1677
FokI	GGATG	6 cut(s)	332, 590, 596, 600, 622, 1364
FriOI	GRGCYC	3 cut(s)	171, 439, 689
Fsp4HI	GCNGC	5 cut(s)	291, 365, 1320, 1454, 1677
FspAI	RTGCGCAY	1 cut(s)	22
FspBI	CTAG	3 cut(s)	1304, 1464, 1697
FspI	TGCGCA	1 cut(s)	22
GlaI	GCGC	3 cut(s)	22, 52, 927
GluI	GCNGC	5 cut(s)	291, 365, 1320, 1454, 1677
GsaI	CCCAGC	2 cut(s)	787, 1419
GsuI	CTGGAG	1 cut(s)	115
HaeII	RGCGCY	1 cut(s)	54
HaeIII	GGCC	4 cut(s)	85, 687, 1287, 1624
HapII	CCGG	3 cut(s)	1034, 1129, 1442
HgaI	GACGC	2 cut(s)	110, 528
HhaI	GCGC	3 cut(s)	23, 53, 928
Hin1I	GRCGYC	1 cut(s)	51
Hin1II	CATG	4 cut(s)	397, 1108, 1219, 1376
Hin6I	GCGC	3 cut(s)	21, 51, 926
HinP1I	GCGC	3 cut(s)	21, 51, 926
HincII	GTYRAC	2 cut(s)	1425, 1540
HindII	GTYRAC	2 cut(s)	1425, 1540
HindIII	AAGCTT	2 cut(s)	345, 408
HinfI	GANTC	9 cut(s)	303, 380, 588, 632, 736, 1250, 1493, 1801, 1827
HpaII	CCGG	3 cut(s)	1034, 1129, 1442
HphI	GGTGA	3 cut(s)	154, 745, 1702
Hpy166II	GTNNAC	5 cut(s)	431, 543, 1425, 1540, 1551
Hpy8I	GTNNAC	5 cut(s)	431, 543, 1425, 1540, 1551
Hpy99I	CGWCG	2 cut(s)	101, 104
HpyAV	CCTTC	3 cut(s)	41, 525, 1277
HpyCH4III	ACNGT	5 cut(s)	18, 27, 74, 354, 1182
HpyCH4IV	ACGT	2 cut(s)	150, 793
HpyF10VI	GCNNNNNNNGC	7 cut(s)	287, 329, 364, 443, 545, 814, 1576
HpyF3I	CTNAG	7 cut(s)	368, 799, 873, 953, 1023, 1672, 1788
HpySE526I	ACGT	2 cut(s)	150, 793
Hsp92I	GRCGYC	1 cut(s)	51
Hsp92II	CATG	4 cut(s)	397, 1108, 1219, 1376
HspAI	GCGC	3 cut(s)	21, 51, 926
KasI	GGCGCC	1 cut(s)	50
Kpn2I	TCCGGA	1 cut(s)	1033
Ksp22I	TGATCA	1 cut(s)	1354
Kzo9I	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
LmnI	GCTCC	6 cut(s)	8, 134, 1048, 1223, 1444, 1813
Lsp1109I	GCAGC	5 cut(s)	302, 376, 1306, 1465, 1663
LweI	GCATC	6 cut(s)	46, 310, 796, 1331, 1595, 1711
MaeI	CTAG	3 cut(s)	1304, 1464, 1697
MaeII	ACGT	2 cut(s)	150, 793
MaeIII	GTNAC	2 cut(s)	894, 1690
MalI	GATC	7 cut(s)	422, 942, 1038, 1356, 1362, 1386, 1500
MbiI	CCGCTC	1 cut(s)	6
MboI	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
MflI	RGATCY	3 cut(s)	1036, 1384, 1498
MhlI	GDGCHC	4 cut(s)	171, 439, 689, 1553
MluCI	AATT	8 cut(s)	386, 505, 554, 803, 991, 1013, 1557, 1574
Mly113I	GGCGCC	1 cut(s)	51
MlyI	GAGTC	5 cut(s)	297, 745, 1502, 1810, 1836
MmeI	TCCRAC	4 cut(s)	657, 958, 1182, 1476
Mph1103I	ATGCAT	1 cut(s)	61
MroI	TCCGGA	1 cut(s)	1033
MseI	TTAA	5 cut(s)	462, 900, 1097, 1184, 1725
MslI	CAYNNNNRTG	2 cut(s)	792, 1404
MspA1I	CMGCKG	2 cut(s)	293, 1676
MspI	CCGG	3 cut(s)	1034, 1129, 1442
MspR9I	CCNGG	2 cut(s)	275, 1443
Mva1269I	GAATGC	2 cut(s)	523, 874
MvaI	CCWGG	1 cut(s)	275
MwoI	GCNNNNNNNGC	7 cut(s)	287, 329, 364, 443, 545, 814, 1576
NarI	GGCGCC	1 cut(s)	51
NciI	CCSGG	1 cut(s)	1443
NdeI	CATATG	1 cut(s)	1429
NdeII	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
NlaIII	CATG	4 cut(s)	397, 1108, 1219, 1376
NlaIV	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1175
NmeAIII	GCCGAG	2 cut(s)	290, 1600
NmuCI	GTSAC	2 cut(s)	894, 1690
NsbI	TGCGCA	1 cut(s)	22
NsiI	ATGCAT	1 cut(s)	61
NspI	RCATGY	2 cut(s)	397, 1219
NspV	TTCGAA	1 cut(s)	78
PaeR7I	CTCGAG	1 cut(s)	438
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PctI	GAATGC	2 cut(s)	523, 874
PfeI	GAWTC	4 cut(s)	380, 588, 632, 1250
PkrI	GCNGC	5 cut(s)	292, 366, 1321, 1455, 1678
PleI	GAGTC	5 cut(s)	297, 744, 1501, 1809, 1835
PluTI	GGCGCC	1 cut(s)	54
PpsI	GAGTC	5 cut(s)	297, 744, 1501, 1809, 1835
PpuMI	RGGWCCY	1 cut(s)	649
PshBI	ATTAAT	1 cut(s)	462
PsiI	TTATAA	2 cut(s)	999, 1145
Psp124BI	GAGCTC	1 cut(s)	171
Psp1406I	AACGTT	1 cut(s)	150
Psp5II	RGGWCCY	1 cut(s)	649
Psp6I	CCWGG	1 cut(s)	273
PspFI	CCCAGC	2 cut(s)	783, 1415
PspGI	CCWGG	1 cut(s)	273
PspN4I	GGNNCC	6 cut(s)	10, 52, 66, 687, 688, 1175
PspOMI	GGGCCC	1 cut(s)	685
PspPI	GGNCC	4 cut(s)	64, 649, 685, 686
PspPPI	RGGWCCY	1 cut(s)	649
PspXI	VCTCGAGB	1 cut(s)	438
PstI	CTGCAG	1 cut(s)	1681
PstNI	CAGNNNCTG	1 cut(s)	1280
PsuI	RGATCY	3 cut(s)	1036, 1384, 1498
PvuII	CAGCTG	2 cut(s)	293, 1676
RsaI	GTAC	5 cut(s)	44, 179, 620, 1118, 1332
RsaNI	GTAC	5 cut(s)	43, 178, 619, 1117, 1331
RseI	CAYNNNNRTG	2 cut(s)	792, 1404
SacI	GAGCTC	1 cut(s)	171
SaqAI	TTAA	5 cut(s)	462, 900, 1097, 1184, 1725
SatI	GCNGC	5 cut(s)	291, 365, 1320, 1454, 1677
Sau3AI	GATC	7 cut(s)	420, 940, 1036, 1354, 1360, 1384, 1498
Sau96I	GGNCC	4 cut(s)	64, 649, 685, 686
ScaI	AGTACT	1 cut(s)	1118
SchI	GAGTC	5 cut(s)	297, 745, 1502, 1810, 1836
ScrFI	CCNGG	2 cut(s)	275, 1443
SduI	GDGCHC	4 cut(s)	171, 439, 689, 1553
SfaNI	GCATC	6 cut(s)	46, 310, 796, 1331, 1595, 1711
SfcI	CTRYAG	2 cut(s)	543, 1677
SfoI	GGCGCC	1 cut(s)	52
Sfr274I	CTCGAG	1 cut(s)	438
SfuI	TTCGAA	1 cut(s)	78
SinI	GGWCC	2 cut(s)	64, 649
SlaI	CTCGAG	1 cut(s)	438
SmiMI	CAYNNNNRTG	2 cut(s)	792, 1404
SmlI	CTYRAG	6 cut(s)	438, 858, 906, 1410, 1490, 1502
SmoI	CTYRAG	6 cut(s)	438, 858, 906, 1410, 1490, 1502
Sse9I	AATT	8 cut(s)	386, 505, 554, 803, 991, 1013, 1557, 1574
SsiI	CCGC	3 cut(s)	6, 139, 281
SspDI	GGCGCC	1 cut(s)	50
SspMI	CTAG	3 cut(s)	1304, 1464, 1697
SstI	GAGCTC	1 cut(s)	171
StyD4I	CCNGG	2 cut(s)	273, 1441
StyI	CCWWGG	1 cut(s)	424
TaaI	ACNGT	5 cut(s)	18, 27, 74, 354, 1182
TaiI	ACGT	2 cut(s)	153, 796
TaqI	TCGA	4 cut(s)	78, 106, 117, 439
TasI	AATT	8 cut(s)	386, 505, 554, 803, 991, 1013, 1557, 1574
TatI	WGTACW	2 cut(s)	1116, 1330
TfiI	GAWTC	4 cut(s)	380, 588, 632, 1250
Tru1I	TTAA	5 cut(s)	462, 900, 1097, 1184, 1725
Tru9I	TTAA	5 cut(s)	462, 900, 1097, 1184, 1725
TscAI	CASTG	3 cut(s)	21, 30, 665
TseFI	GTSAC	2 cut(s)	894, 1690
TseI	GCWGC	5 cut(s)	290, 364, 1319, 1453, 1676
Tsp45I	GTSAC	2 cut(s)	894, 1690
TspGWI	ACGGA	1 cut(s)	606
TspRI	CASTG	3 cut(s)	21, 30, 665
VneI	GTGCAC	1 cut(s)	1549
VpaK11BI	GGWCC	2 cut(s)	64, 649
VspI	ATTAAT	1 cut(s)	462
XapI	RAATTY	2 cut(s)	505, 991
XceI	RCATGY	2 cut(s)	397, 1219
XhoI	CTCGAG	1 cut(s)	438
XmiI	GTMKAC	2 cut(s)	430, 542
XspI	CTAG	3 cut(s)	1304, 1464, 1697
ZrmI	AGTACT	1 cut(s)	1118
Zsp2I	ATGCAT	1 cut(s)	61

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.