AT5G49020
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
19871191 .. 19874974
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G49020.1

Sequence Viewer

Length: 1587 bp
ATGGAGATTCCTTCTCTGAATAAGCAGCAAGAGTTCACTCTCGCCTCCGTCACTGATCTCACTTCTCCTTCCTCATCTCTTTCGTCCTCTCCTGTTGTAGCTACGTTTTCATGCGTTAATGAAGTCAAGGAACTCCGATTTCAGGAATCGAAATCGTCTGATGGTTTCAGTTTTGATCTTAGTTCGACTCAGTTGTTCAAGTTGGGGCCACTTCAGTTCACTTGTGTATCTGATGGTTCGATTTCTTCTGCAAAGGAGAAATCGTCATTTTCTCGAGGAGTTGTAATAAAATTTAGAGATGAGAAGGATAGCAAGGAGTTTTGTGATTCATTTGAGGAATGTAAAAAGGATGATGCTGTTAAACAAGGATCAGCCTTGCCGAACGGAACAGTTGTTTCAGCTAATAAAAGCAAGTTCGATGATAAGATTGAGGCTGCTTCAGCCAAAATGTATTTCCATTATTATGGACAACTTTTACATCAGCAAAATATGCTACAGGATTATGTGAGGACGGGTACATATCATGCTGCAGTCATGGAGAACCGTTCAGATTTTTCTGGCCGTGTTGTTGTCGATGTAGGCGCTGGTAGTGGAATTTTGTCAATGTTTGCTGCACTGGCTGGTGCCAAGCATGTGTATGCTGTGGAGGCGTCAGAAATGGCTGAATATGCCCGTAAACTGATTGCTGGAAACCCATTGCTTGCTGAGAGGATCACAGTCATCAAGGGAAAAATTGAGGATATTGAGTTGCCTGAGAAGGCCGATGTTTTGATCTCTGAACCAATGGGCACCCTATTGGTCAATGAGAGGATGCTGGAAACATATGTTATTGCTAGGGATCGTTTTCTGTCTCCAAACGGAAAAATGTTTCCGACGGTTGGAAGGATCCACATGGCACCTTTCGCCGATGAATTCTTATTTGTTGAAATGGCAAATAAGGCTTTGTTTTGGCAACAACAGAACTATTATGGAGTTGATTTGACACCTCTATATGTATCAGCCCACCAGGGTTATTTTTCCCAGCCCGTGGTTGATGCATTTGATCCGAGATTATTGGTGGCTCCCTCGATGTTTCATGTGATAGATTTCACTATGATGACGGAAGAACAATTTTATGAGATTGATATCCCGTTGAAGTTCACTGCGTCTGTGTGTACCAGAATTCATGGACTTGCGTGCTGGTTTGATGTTCTCTTTGACGGGAGCACGGTGCAAAGATGGTTTACAACTGCTCCCGGTGCACCAACAACCCATTGGTACCAAATAAGATGTGTTCTCTCGCAGCCTATTCACGTCATGGCAGGGCAAGAGATCACTGGTAGACTTCATTTGATTGCCCACAGTGCTCAGAGTTACACTATAAATCTAACACTCTCAGCTAAAATGTGGGGTCCCGGTGCCAATCAAGGTGGAATCCTCCAGACATCATCGTGCAAACTCGATCTGAAGGAACCCTATTATAGAATGTCTCAGCCACAGGTTTACCCTACACAGGAACCACCAGCTCAGTCGCAAGACATACATATACATAGTGATGACTTGGAAGAACTAGAGTTGCTACAACAAAACGCAAACGCTCAGCTCTAG

Protein Analysis

528

Amino Acids

58.86

Weight (kDa)

5.31

Isoelectric Point (pI)

52.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_PRMT_N PF25350 9 - 116 4.8e-32 Protein arginine methyltransferase N-terminal PH domain
PrmA PF06325 186 - 259 8.9e-08 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_25 PF13649 190 - 287 6.2e-07 Methyltransferase domain
PRMT_C PF22528 309 - 449 4.9e-20 Arginine methyltransferase oligomerization subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1257
AccB1I GGYRCC 5 cut(s) 623, 788, 895, 1257, 1397
AccB7I CCANNNNNTGG 1 cut(s) 1027
AccI GTMKAC 1 cut(s) 1321
AclWI GGATC 6 cut(s) 376, 719, 846, 880, 893, 1037
AcoI YGGCCR 1 cut(s) 559
AcsI RAATTY 4 cut(s) 290, 594, 911, 1161
AcuI CTGAAG 3 cut(s) 197, 423, 1466
AcyI GRCGYC 1 cut(s) 650
AfaI GTAC 3 cut(s) 517, 1156, 1259
AfiI CCNNNNNNNGG 4 cut(s) 142, 878, 1027, 1492
AgsI TTSAA 3 cut(s) 199, 926, 1135
AjiI CACGTC 1 cut(s) 1294
AjnI CCWGG 1 cut(s) 1005
AjuI GAANNNNNNNTTGG 2 cut(s) 437, 469
AluBI AGCT 5 cut(s) 101, 401, 1379, 1505, 1582
AluI AGCT 5 cut(s) 101, 401, 1379, 1505, 1582
Alw21I GWGCWC 3 cut(s) 1208, 1243, 1348
Alw26I GTCTC 2 cut(s) 855, 1473
Alw44I GTGCAC 1 cut(s) 1239
AlwI GGATC 6 cut(s) 376, 719, 846, 880, 893, 1037
Ama87I CYCGRG 1 cut(s) 273
AoxI GGCC 3 cut(s) 206, 559, 759
ApaLI GTGCAC 1 cut(s) 1239
ApeKI GCWGC 5 cut(s) 25, 434, 527, 611, 1282
ApoI RAATTY 4 cut(s) 290, 594, 911, 1161
Asp718I GGTACC 1 cut(s) 1257
AspLEI GCGC 1 cut(s) 584
AspS9I GGNCC 2 cut(s) 206, 1391
AsuC2I CCSGG 2 cut(s) 1236, 1395
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 1 cut(s) 1391
BaeGI GKGCMC 2 cut(s) 791, 1243
BaeI ACNNNNGTAYC 2 cut(s) 210, 243
BamHI GGATCC 1 cut(s) 885
BanI GGYRCC 5 cut(s) 623, 788, 895, 1257, 1397
Bbv12I GWGCWC 3 cut(s) 1208, 1243, 1348
BbvI GCAGC 5 cut(s) 37, 421, 514, 598, 1294
BccI CCATC 3 cut(s) 155, 227, 1212
BceAI ACGGC 1 cut(s) 546
BciT130I CCWGG 1 cut(s) 1007
BcnI CCSGG 2 cut(s) 1236, 1395
BcoDI GTCTC 2 cut(s) 855, 1473
BfaI CTAG 3 cut(s) 834, 1550, 1585
BfmI CTRYAG 2 cut(s) 494, 528
BfoI RGCGCY 1 cut(s) 585
BisI GCNGC 5 cut(s) 26, 435, 528, 612, 1283
BlpI GCTNAGC 1 cut(s) 1578
BlsI GCNGC 5 cut(s) 27, 436, 529, 613, 1284
Bme1390I CCNGG 3 cut(s) 1007, 1236, 1395
Bme18I GGWCC 1 cut(s) 1391
BmeT110I CYCGRG 1 cut(s) 273
BmgBI CACGTC 1 cut(s) 1294
BmgT120I GGNCC 2 cut(s) 206, 1391
BmrFI CCNGG 3 cut(s) 1007, 1236, 1395
BmsI GCATC 3 cut(s) 343, 801, 1024
BpmI CTGGAG 1 cut(s) 1403
Bpu1102I GCTNAGC 1 cut(s) 1578
BpuMI CCSGG 2 cut(s) 1236, 1395
BsaBI GATNNNNATC 1 cut(s) 1124
BsaHI GRCGYC 1 cut(s) 650
BsaJI CCNNGG 2 cut(s) 1006, 1026
BsaXI ACNNNNNCTCC 4 cut(s) 248, 278, 1216, 1246
Bsc4I CCNNNNNNNGG 4 cut(s) 142, 878, 1027, 1492
Bse1I ACTGG 2 cut(s) 621, 1321
Bse3DI GCAATG 1 cut(s) 695
Bse8I GATNNNNATC 1 cut(s) 1124
BseBI CCWGG 1 cut(s) 1007
BseDI CCNNGG 2 cut(s) 1006, 1026
BseGI GGATG 2 cut(s) 355, 816
BseJI GATNNNNATC 1 cut(s) 1124
BseLI CCNNNNNNNGG 4 cut(s) 142, 878, 1027, 1492
BseMI GCAATG 1 cut(s) 695
BseMII CTCAG 7 cut(s) 203, 696, 744, 1361, 1389, 1484, 1520
BseNI ACTGG 2 cut(s) 621, 1321
BseRI GAGGAG 1 cut(s) 291
BseSI GKGCMC 2 cut(s) 791, 1243
BseXI GCAGC 5 cut(s) 37, 421, 514, 598, 1294
BseYI CCCAGC 1 cut(s) 1020
BsgI GTGCAG 1 cut(s) 597
BshFI GGCC 3 cut(s) 208, 561, 761
BshNI GGYRCC 5 cut(s) 623, 788, 895, 1257, 1397
BsiHKAI GWGCWC 3 cut(s) 1208, 1243, 1348
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 2 cut(s) 1236, 1395
BslFI GGGAC 1 cut(s) 1377
BslI CCNNNNNNNGG 4 cut(s) 142, 878, 1027, 1492
BsmAI GTCTC 2 cut(s) 855, 1473
BsmFI GGGAC 1 cut(s) 1377
BsnI GGCC 3 cut(s) 208, 561, 761
BsoBI CYCGRG 1 cut(s) 273
Bsp1286I GDGCHC 4 cut(s) 791, 1208, 1243, 1348
Bsp1720I GCTNAGC 1 cut(s) 1578
BspANI GGCC 3 cut(s) 208, 561, 761
BspCNI CTCAG 7 cut(s) 202, 697, 745, 1360, 1388, 1483, 1519
BspMAI CTGCAG 1 cut(s) 532
BspPI GGATC 6 cut(s) 376, 719, 846, 880, 893, 1037
BspT107I GGYRCC 5 cut(s) 623, 788, 895, 1257, 1397
BsrDI GCAATG 1 cut(s) 695
BsrI ACTGG 2 cut(s) 621, 1321
BssECI CCNNGG 2 cut(s) 1006, 1026
BssNI GRCGYC 1 cut(s) 650
Bst2UI CCWGG 1 cut(s) 1007
Bst4CI ACNGT 6 cut(s) 391, 545, 718, 877, 1210, 1343
BstACI GRCGYC 1 cut(s) 650
BstAPI GCANNNNNTGC 1 cut(s) 490
BstC8I GCNNGC 2 cut(s) 702, 1177
BstDEI CTNAG 9 cut(s) 179, 189, 705, 753, 1347, 1375, 1470, 1506, 1578
BstDSI CCRYGG 1 cut(s) 1026
BstF5I GGATG 2 cut(s) 355, 816
BstH2I RGCGCY 1 cut(s) 585
BstHHI GCGC 1 cut(s) 584
BstMAI GTCTC 2 cut(s) 855, 1473
BstMWI GCNNNNNNNGC 9 cut(s) 440, 490, 617, 647, 668, 902, 938, 1238, 1343
BstNI CCWGG 1 cut(s) 1007
BstNSI RCATGY 1 cut(s) 635
BstSCI CCNGG 3 cut(s) 1005, 1234, 1393
BstSFI CTRYAG 2 cut(s) 494, 528
BstSLI GKGCMC 2 cut(s) 791, 1243
BstV1I GCAGC 5 cut(s) 37, 421, 514, 598, 1294
BstX2I RGATCY 1 cut(s) 885
BstXI CCANNNNNNTGG 1 cut(s) 464
BstYI RGATCY 1 cut(s) 885
BsuRI GGCC 3 cut(s) 208, 561, 761
BtgI CCRYGG 1 cut(s) 1026
BtrI CACGTC 1 cut(s) 1294
BtsCI GGATG 2 cut(s) 355, 816
BtsI GCAGTG 1 cut(s) 1140
BtsIMutI CAGTG 5 cut(s) 51, 614, 1140, 1314, 1348
Cac8I GCNNGC 2 cut(s) 702, 1177
CfoI GCGC 1 cut(s) 584
Cfr13I GGNCC 2 cut(s) 206, 1391
CseI GACGC 2 cut(s) 639, 1134
Csp6I GTAC 3 cut(s) 516, 1155, 1258
CspCI CAANNNNNGTGG 2 cut(s) 1390, 1425
CviAII CATG 8 cut(s) 111, 524, 535, 632, 892, 1076, 1166, 1297
CviQI GTAC 3 cut(s) 516, 1155, 1258
DdeI CTNAG 9 cut(s) 179, 189, 705, 753, 1347, 1375, 1470, 1506, 1578
EaeI YGGCCR 1 cut(s) 559
Eco32I GATATC 1 cut(s) 1126
Eco47I GGWCC 1 cut(s) 1391
Eco57I CTGAAG 3 cut(s) 197, 423, 1466
Eco88I CYCGRG 1 cut(s) 273
EcoO109I RGGNCCY 1 cut(s) 1391
EcoRI GAATTC 2 cut(s) 911, 1161
EcoRII CCWGG 1 cut(s) 1005
EcoRV GATATC 1 cut(s) 1126
EcoT22I ATGCAT 1 cut(s) 1039
FaeI CATG 8 cut(s) 114, 527, 538, 635, 895, 1079, 1169, 1300
FaqI GGGAC 1 cut(s) 1377
FatI CATG 8 cut(s) 110, 523, 534, 631, 891, 1075, 1165, 1296
FauNDI CATATG 1 cut(s) 823
FblI GTMKAC 1 cut(s) 1321
Fnu4HI GCNGC 5 cut(s) 26, 435, 528, 612, 1283
FokI GGATG 2 cut(s) 362, 823
Fsp4HI GCNGC 5 cut(s) 26, 435, 528, 612, 1283
FspBI CTAG 3 cut(s) 834, 1550, 1585
GlaI GCGC 1 cut(s) 583
GluI GCNGC 5 cut(s) 26, 435, 528, 612, 1283
GsaI CCCAGC 1 cut(s) 1024
GsuI CTGGAG 1 cut(s) 1403
HaeII RGCGCY 1 cut(s) 585
HaeIII GGCC 3 cut(s) 208, 561, 761
HapII CCGG 2 cut(s) 1236, 1395
HgaI GACGC 2 cut(s) 639, 1134
HhaI GCGC 1 cut(s) 584
Hin1I GRCGYC 1 cut(s) 650
Hin1II CATG 8 cut(s) 114, 527, 538, 635, 895, 1079, 1169, 1300
Hin6I GCGC 1 cut(s) 582
HinP1I GCGC 1 cut(s) 582
HinfI GANTC 5 cut(s) 7, 146, 187, 326, 1413
HpaII CCGG 2 cut(s) 1236, 1395
Hpy166II GTNNAC 9 cut(s) 36, 219, 677, 1140, 1155, 1224, 1241, 1322, 1483
Hpy188III TCNNGA 3 cut(s) 143, 273, 1420
Hpy8I GTNNAC 9 cut(s) 36, 219, 677, 1140, 1155, 1224, 1241, 1322, 1483
Hpy99I CGWCG 1 cut(s) 877
HpyAV CCTTC 6 cut(s) 21, 78, 298, 751, 876, 1441
HpyCH4III ACNGT 6 cut(s) 391, 545, 718, 877, 1210, 1343
HpyCH4IV ACGT 2 cut(s) 104, 1293
HpyCH4V TGCA 7 cut(s) 251, 530, 614, 1037, 1213, 1241, 1434
HpyF10VI GCNNNNNNNGC 9 cut(s) 440, 490, 617, 647, 668, 902, 938, 1238, 1343
HpyF3I CTNAG 9 cut(s) 179, 189, 705, 753, 1347, 1375, 1470, 1506, 1578
HpySE526I ACGT 2 cut(s) 104, 1293
Hsp92I GRCGYC 1 cut(s) 650
Hsp92II CATG 8 cut(s) 114, 527, 538, 635, 895, 1079, 1169, 1300
HspAI GCGC 1 cut(s) 582
KflI GGGWCCC 1 cut(s) 1391
KpnI GGTACC 1 cut(s) 1261
LmnI GCTCC 3 cut(s) 1066, 1203, 1237
Lsp1109I GCAGC 5 cut(s) 37, 421, 514, 598, 1294
LweI GCATC 3 cut(s) 343, 801, 1024
MaeI CTAG 3 cut(s) 834, 1550, 1585
MaeII ACGT 2 cut(s) 104, 1293
MaeIII GTNAC 2 cut(s) 49, 1352
MboII GAAGA 3 cut(s) 237, 1115, 1556
MflI RGATCY 1 cut(s) 885
MhlI GDGCHC 4 cut(s) 791, 1208, 1243, 1348
MluCI AATT 6 cut(s) 290, 594, 732, 911, 1109, 1161
MlyI GAGTC 1 cut(s) 181
MmeI TCCRAC 2 cut(s) 859, 896
Mph1103I ATGCAT 1 cut(s) 1039
MseI TTAA 2 cut(s) 117, 360
MslI CAYNNNNRTG 5 cut(s) 462, 636, 1094, 1429, 1533
MspI CCGG 2 cut(s) 1236, 1395
MspR9I CCNGG 3 cut(s) 1007, 1236, 1395
MvaI CCWGG 1 cut(s) 1007
MwoI GCNNNNNNNGC 9 cut(s) 440, 490, 617, 647, 668, 902, 938, 1238, 1343
NciI CCSGG 2 cut(s) 1236, 1395
NdeI CATATG 1 cut(s) 823
NlaIII CATG 8 cut(s) 114, 527, 538, 635, 895, 1079, 1169, 1300
NmuCI GTSAC 1 cut(s) 49
NsiI ATGCAT 1 cut(s) 1039
NspI RCATGY 1 cut(s) 635
PaeR7I CTCGAG 1 cut(s) 273
PfeI GAWTC 4 cut(s) 7, 146, 326, 1413
PflMI CCANNNNNTGG 1 cut(s) 1027
PkrI GCNGC 5 cut(s) 27, 436, 529, 613, 1284
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
PpuMI RGGWCCY 1 cut(s) 1391
Psp5II RGGWCCY 1 cut(s) 1391
Psp6I CCWGG 1 cut(s) 1005
PspFI CCCAGC 1 cut(s) 1020
PspGI CCWGG 1 cut(s) 1005
PspPI GGNCC 2 cut(s) 206, 1391
PspPPI RGGWCCY 1 cut(s) 1391
PstI CTGCAG 1 cut(s) 532
PsuI RGATCY 1 cut(s) 885
RsaI GTAC 3 cut(s) 517, 1156, 1259
RsaNI GTAC 3 cut(s) 516, 1155, 1258
RseI CAYNNNNRTG 5 cut(s) 462, 636, 1094, 1429, 1533
SaqAI TTAA 2 cut(s) 117, 360
SatI GCNGC 5 cut(s) 26, 435, 528, 612, 1283
Sau96I GGNCC 2 cut(s) 206, 1391
SchI GAGTC 1 cut(s) 181
ScrFI CCNGG 3 cut(s) 1007, 1236, 1395
SduI GDGCHC 4 cut(s) 791, 1208, 1243, 1348
SfaNI GCATC 3 cut(s) 343, 801, 1024
SfcI CTRYAG 2 cut(s) 494, 528
Sfr274I CTCGAG 1 cut(s) 273
SinI GGWCC 1 cut(s) 1391
SlaI CTCGAG 1 cut(s) 273
SmiMI CAYNNNNRTG 5 cut(s) 462, 636, 1094, 1429, 1533
SmlI CTYRAG 1 cut(s) 273
SmoI CTYRAG 1 cut(s) 273
Sse9I AATT 6 cut(s) 290, 594, 732, 911, 1109, 1161
SspMI CTAG 3 cut(s) 834, 1550, 1585
StyD4I CCNGG 3 cut(s) 1005, 1234, 1393
TaaI ACNGT 6 cut(s) 391, 545, 718, 877, 1210, 1343
TaiI ACGT 2 cut(s) 107, 1296
TaqI TCGA 8 cut(s) 149, 185, 239, 274, 417, 573, 1067, 1440
TasI AATT 6 cut(s) 290, 594, 732, 911, 1109, 1161
TfiI GAWTC 4 cut(s) 7, 146, 326, 1413
Tru1I TTAA 2 cut(s) 117, 360
Tru9I TTAA 2 cut(s) 117, 360
TscAI CASTG 5 cut(s) 58, 621, 1147, 1321, 1348
TseFI GTSAC 1 cut(s) 49
TseI GCWGC 5 cut(s) 25, 434, 527, 611, 1282
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 7 cut(s) 99, 135, 318, 924, 1064, 1154, 1316
TspGWI ACGGA 4 cut(s) 37, 399, 873, 1115
TspRI CASTG 5 cut(s) 58, 621, 1147, 1321, 1348
Van91I CCANNNNNTGG 1 cut(s) 1027
VneI GTGCAC 1 cut(s) 1239
VpaK11BI GGWCC 1 cut(s) 1391
XapI RAATTY 4 cut(s) 290, 594, 911, 1161
XceI RCATGY 1 cut(s) 635
XcmI CCANNNNNNNNNTGG 1 cut(s) 1251
XhoI CTCGAG 1 cut(s) 273
XmiI GTMKAC 1 cut(s) 1321
XspI CTAG 3 cut(s) 834, 1550, 1585
Zsp2I ATGCAT 1 cut(s) 1039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.