AT5G49690

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0013859
Physical Location & Seq
Reverse (-)
20189655 .. 20191604
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G49690.1

Sequence Viewer

Length: 1383 bp
ATGGTCGACAAGAGAGAAGAAGTTATGCACGTAGCCATGTTTCCATGGCTAGCTATGGGTCATCTCCTTCCTTTTCTTCGTCTCTCCAAGTTACTAGCTCAAAAGGGTCACAAGATCTCTTTCATATCAACACCAAGAAACATCGAAAGACTTCCTAAATTACAATCAAACCTCGCCTCCTCCATCACCTTCGTCTCTTTCCCTCTCCCTCCCATCTCAGGCTTGCCTCCTTCTTCAGAATCATCCATGGACGTTCCTTACAACAAGCAACAGTCTCTTAAAGCCGCTTTTGATCTTCTTCAGCCACCGTTGAAAGAGTTTCTCCGACGGTCTTCTCCGGATTGGATCATATACGACTATGCTTCTCACTGGCTTCCTTCTATTGCGGCCGAGCTTGGAATCTCTAAGGCTTTCTTTAGTCTCTTTAACGCAGCTACTCTCTGTTTCATGGGACCGTCTTCGTCTTTGATTGAAGAAATTAGATCAACGCCGGAAGATTTCACGGTGGTGCCACCGTGGGTCCCGTTCAAGTCAAACATCGTGTTTCGTTATCATGAAGTTACTAGATACGTTGAGAAGACAGAGGAAGATGTAACCGGAGTCTCTGACTCAGTTCGGTTTGGTTACTCGATTGACGAAAGCGATGCGGTTTTTGTCCGTAGCTGTCCGGAGTTTGAACCGGAATGGTTTGGTTTACTAAAAGACCTGTACCGTAAACCGGTATTTCCAATCGGGTTTTTGCCTCCGGTTATTGAAGACGACGATGCCGTTGATACTACATGGGTTCGTATAAAGAAGTGGCTCGACAAGCAACGGCTTAATTCAGTTGTTTACGTGTCACTTGGCACCGAAGCGAGTCTTCGTCATGAGGAAGTAACTGAGCTAGCTCTTGGGTTAGAGAAGTCAGAGACACCGTTCTTTTGGGTCCTAAGGAACGAGCCAAAGATTCCAGATGGGTTCAAAACACGAGTCAAGGGACGTGGAATGGTTCATGTTGGTTGGGTTCCACAAGTGAAAATACTTAGTCACGAGTCAGTAGGAGGGTTCTTGACACATTGTGGTTGGAACTCAGTGGTGGAAGGGTTAGGGTTTGGTAAAGTTCCAATCTTTTTTCCGGTGTTGAATGAGCAAGGACTTAATACGAGGTTGTTGCATGGGAAAGGACTTGGTGTTGAGGTTTCAAGAGATGAGAGAGATGGGTCGTTTGATTCTGACTCGGTCGCTGACTCGATTAGGTTGGTGATGATTGATGATGCTGGCGAGGAGATAAGGGCTAAGGCTAAAGTGATGAAGGATTTGTTTGGGAACATGGATGAGAATATTCGTTATGTTGACGAACTTGTTAGGTTTATGAGAAGTAAAGGATCATCATCATCATCATGA

Protein Analysis

460

Amino Acids

51.96

Weight (kDa)

5.79

Isoelectric Point (pI)

55.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 10 - 138 3.4e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 274 - 397 3.9e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 508, 845
AccI GTMKAC 1 cut(s) 6
AccIII TCCGGA 2 cut(s) 337, 667
AciI CCGC 3 cut(s) 285, 386, 647
AclWI GGATC 2 cut(s) 353, 1372
AcoI YGGCCR 1 cut(s) 387
AcuI CTGAAG 2 cut(s) 219, 284
AdeI CACNNNGTG 1 cut(s) 1058
AfaI GTAC 1 cut(s) 710
AfiI CCNNNNNNNGG 2 cut(s) 218, 718
AflIII ACRYGT 1 cut(s) 834
AgeI ACCGGT 1 cut(s) 718
AgsI TTSAA 8 cut(s) 313, 473, 529, 677, 755, 961, 1123, 1182
AjiI CACGTC 1 cut(s) 980
AleI CACNNNNGTG 1 cut(s) 506
AluBI AGCT 7 cut(s) 53, 98, 394, 434, 663, 883, 887
AluI AGCT 7 cut(s) 53, 98, 394, 434, 663, 883, 887
Alw26I GTCTC 6 cut(s) 86, 199, 279, 425, 607, 902
AlwI GGATC 2 cut(s) 353, 1372
Aor13HI TCCGGA 2 cut(s) 337, 667
AoxI GGCC 1 cut(s) 387
ApeKI GCWGC 1 cut(s) 431
ArsI GACNNNNNNTTYG 2 cut(s) 954, 986
AsiGI ACCGGT 1 cut(s) 718
Asp700I GAANNNNTTC 1 cut(s) 150
AspS9I GGNCC 3 cut(s) 452, 520, 925
AsuHPI GGTGA 2 cut(s) 178, 1252
AsuNHI GCTAGC 2 cut(s) 49, 883
AvaII GGWCC 3 cut(s) 452, 520, 925
AxyI CCTNAGG 1 cut(s) 929
BanI GGYRCC 2 cut(s) 508, 845
BauI CACGAG 2 cut(s) 966, 1028
BbsI GAAGAC 5 cut(s) 324, 450, 584, 762, 851
BbvI GCAGC 1 cut(s) 443
BccI CCATC 4 cut(s) 191, 221, 947, 1190
BceAI ACGGC 2 cut(s) 752, 830
BcgI CGANNNNNNTGC 4 cut(s) 626, 660, 1132, 1166
BcoDI GTCTC 6 cut(s) 86, 199, 279, 425, 607, 902
BfaI CTAG 4 cut(s) 50, 95, 564, 884
BglII AGATCT 1 cut(s) 114
BisI GCNGC 3 cut(s) 285, 387, 432
BlsI GCNGC 3 cut(s) 286, 388, 433
Bme18I GGWCC 3 cut(s) 452, 520, 925
BmgBI CACGTC 1 cut(s) 980
BmgT120I GGNCC 3 cut(s) 452, 520, 925
BmiI GGNNCC 7 cut(s) 453, 510, 521, 522, 847, 926, 1005
BmsI GCATC 3 cut(s) 634, 754, 1243
BmtI GCTAGC 2 cut(s) 53, 887
BpiI GAAGAC 5 cut(s) 324, 450, 584, 762, 851
Bpu10I CCTNAGC 1 cut(s) 1275
BsaAI YACGTR 2 cut(s) 31, 835
BsaBI GATNNNNATC 1 cut(s) 1369
BsaJI CCNNGG 3 cut(s) 44, 246, 515
BsaWI WCCGGW 7 cut(s) 337, 596, 667, 679, 718, 745, 1114
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 2 cut(s) 218, 718
Bse118I RCCGGY 1 cut(s) 718
Bse1I ACTGG 1 cut(s) 374
Bse21I CCTNAGG 1 cut(s) 929
Bse8I GATNNNNATC 1 cut(s) 1369
BseAI TCCGGA 2 cut(s) 337, 667
BseDI CCNNGG 3 cut(s) 44, 246, 515
BseGI GGATG 2 cut(s) 242, 1318
BseJI GATNNNNATC 1 cut(s) 1369
BseLI CCNNNNNNNGG 2 cut(s) 218, 718
BseMII CTCAG 4 cut(s) 231, 624, 870, 1083
BseNI ACTGG 1 cut(s) 374
BseRI GAGGAG 2 cut(s) 169, 1277
BseX3I CGGCCG 1 cut(s) 387
BseXI GCAGC 1 cut(s) 443
Bsh1285I CGRYCG 2 cut(s) 390, 1221
BshFI GGCC 1 cut(s) 389
BshNI GGYRCC 2 cut(s) 508, 845
BshTI ACCGGT 1 cut(s) 718
BsiEI CGRYCG 2 cut(s) 390, 1221
BsiSI CCGG 8 cut(s) 338, 491, 597, 668, 680, 719, 746, 1115
BslFI GGGAC 3 cut(s) 465, 506, 990
BslI CCNNNNNNNGG 2 cut(s) 218, 718
BsmAI GTCTC 6 cut(s) 86, 199, 279, 425, 607, 902
BsmBI CGTCTC 2 cut(s) 86, 199
BsmFI GGGAC 3 cut(s) 465, 506, 990
BsnI GGCC 1 cut(s) 389
Bsp13I TCCGGA 2 cut(s) 337, 667
Bsp143I GATC 5 cut(s) 114, 292, 345, 482, 1364
Bsp19I CCATGG 2 cut(s) 44, 246
BspACI CCGC 3 cut(s) 285, 386, 647
BspANI GGCC 1 cut(s) 389
BspCNI CTCAG 4 cut(s) 230, 623, 871, 1082
BspEI TCCGGA 2 cut(s) 337, 667
BspHI TCATGA 3 cut(s) 553, 865, 1379
BspLI GGNNCC 7 cut(s) 453, 510, 521, 522, 847, 926, 1005
BspOI GCTAGC 2 cut(s) 53, 887
BspPI GGATC 2 cut(s) 353, 1372
BspT107I GGYRCC 2 cut(s) 508, 845
BsrFI RCCGGY 1 cut(s) 718
BsrI ACTGG 1 cut(s) 374
BssAI RCCGGY 1 cut(s) 718
BssECI CCNNGG 3 cut(s) 44, 246, 515
BssMI GATC 5 cut(s) 114, 292, 345, 482, 1364
BssSI CACGAG 2 cut(s) 966, 1028
BssT1I CCWWGG 2 cut(s) 44, 246
Bst2BI CACGAG 2 cut(s) 966, 1028
Bst4CI ACNGT 8 cut(s) 273, 309, 330, 456, 505, 516, 713, 915
BstBAI YACGTR 2 cut(s) 31, 835
BstC8I GCNNGC 4 cut(s) 51, 224, 885, 1258
BstDEI CTNAG 8 cut(s) 217, 405, 610, 879, 929, 1022, 1069, 1275
BstDSI CCRYGG 3 cut(s) 44, 246, 515
BstF5I GGATG 2 cut(s) 242, 1318
BstKTI GATC 5 cut(s) 117, 295, 348, 485, 1367
BstMAI GTCTC 6 cut(s) 86, 199, 279, 425, 607, 902
BstMBI GATC 5 cut(s) 114, 292, 345, 482, 1364
BstMCI CGRYCG 2 cut(s) 390, 1221
BstMWI GCNNNNNNNGC 1 cut(s) 808
BstV1I GCAGC 1 cut(s) 443
BstV2I GAAGAC 5 cut(s) 324, 450, 584, 762, 851
BstX2I RGATCY 1 cut(s) 114
BstYI RGATCY 1 cut(s) 114
BstZI CGGCCG 1 cut(s) 387
Bsu36I CCTNAGG 1 cut(s) 929
BsuRI GGCC 1 cut(s) 389
BtgI CCRYGG 3 cut(s) 44, 246, 515
BtgZI GCGATG 1 cut(s) 657
BtrI CACGTC 1 cut(s) 980
BtsCI GGATG 2 cut(s) 242, 1318
BtsIMutI CAGTG 2 cut(s) 367, 1077
Cac8I GCNNGC 4 cut(s) 51, 224, 885, 1258
CciI TCATGA 3 cut(s) 553, 865, 1379
Cfr10I RCCGGY 1 cut(s) 718
Cfr13I GGNCC 3 cut(s) 452, 520, 925
Csp6I GTAC 1 cut(s) 709
CspAI ACCGGT 1 cut(s) 718
CspCI CAANNNNNGTGG 2 cut(s) 961, 996
CviQI GTAC 1 cut(s) 709
DdeI CTNAG 8 cut(s) 217, 405, 610, 879, 929, 1022, 1069, 1275
DpnI GATC 5 cut(s) 116, 294, 347, 484, 1366
DpnII GATC 5 cut(s) 114, 292, 345, 482, 1364
DraIII CACNNNGTG 1 cut(s) 1058
EaeI YGGCCR 1 cut(s) 387
EagI CGGCCG 1 cut(s) 387
EclXI CGGCCG 1 cut(s) 387
Eco130I CCWWGG 2 cut(s) 44, 246
Eco47I GGWCC 3 cut(s) 452, 520, 925
Eco52I CGGCCG 1 cut(s) 387
Eco57I CTGAAG 2 cut(s) 219, 284
Eco81I CCTNAGG 1 cut(s) 929
EcoO109I RGGNCCY 2 cut(s) 520, 925
EcoT14I CCWWGG 2 cut(s) 44, 246
ErhI CCWWGG 2 cut(s) 44, 246
Esp3I CGTCTC 2 cut(s) 86, 199
FalI AAGNNNNNCTT 4 cut(s) 398, 430, 843, 875
FaqI GGGAC 3 cut(s) 465, 506, 990
FblI GTMKAC 1 cut(s) 6
Fnu4HI GCNGC 3 cut(s) 285, 387, 432
FokI GGATG 2 cut(s) 229, 1325
Fsp4HI GCNGC 3 cut(s) 285, 387, 432
FspBI CTAG 4 cut(s) 50, 95, 564, 884
GluI GCNGC 3 cut(s) 285, 387, 432
HaeIII GGCC 1 cut(s) 389
HapII CCGG 8 cut(s) 338, 491, 597, 668, 680, 719, 746, 1115
HincII GTYRAC 2 cut(s) 7, 1333
HindII GTYRAC 2 cut(s) 7, 1333
HpaII CCGG 8 cut(s) 338, 491, 597, 668, 680, 719, 746, 1115
HphI GGTGA 2 cut(s) 178, 1252
Hpy166II GTNNAC 5 cut(s) 7, 695, 716, 832, 1333
Hpy188I TCNGA 5 cut(s) 238, 326, 607, 907, 1213
Hpy188III TCNNGA 9 cut(s) 338, 554, 668, 866, 950, 1028, 1048, 1182, 1380
Hpy8I GTNNAC 5 cut(s) 7, 695, 716, 832, 1333
Hpy99I CGWCG 2 cut(s) 330, 764
HpyAV CCTTC 6 cut(s) 77, 199, 240, 387, 1073, 1285
HpyCH4III ACNGT 8 cut(s) 273, 309, 330, 456, 505, 516, 713, 915
HpyCH4IV ACGT 5 cut(s) 30, 252, 570, 834, 979
HpyCH4V TGCA 2 cut(s) 28, 1153
HpyF10VI GCNNNNNNNGC 1 cut(s) 808
HpyF3I CTNAG 8 cut(s) 217, 405, 610, 879, 929, 1022, 1069, 1275
HpySE526I ACGT 5 cut(s) 30, 252, 570, 834, 979
KflI GGGWCCC 1 cut(s) 520
Kpn2I TCCGGA 2 cut(s) 337, 667
Kzo9I GATC 5 cut(s) 114, 292, 345, 482, 1364
Lsp1109I GCAGC 1 cut(s) 443
LweI GCATC 3 cut(s) 634, 754, 1243
MaeI CTAG 4 cut(s) 50, 95, 564, 884
MaeII ACGT 5 cut(s) 30, 252, 570, 834, 979
MaeIII GTNAC 8 cut(s) 90, 107, 559, 592, 623, 837, 874, 1025
MalI GATC 5 cut(s) 116, 294, 347, 484, 1366
MboI GATC 5 cut(s) 114, 292, 345, 482, 1364
MflI RGATCY 1 cut(s) 114
MluCI AATT 3 cut(s) 158, 477, 820
MlyI GAGTC 7 cut(s) 602, 609, 865, 978, 1040, 1208, 1220
MmeI TCCRAC 2 cut(s) 349, 1043
MroI TCCGGA 2 cut(s) 337, 667
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 4 cut(s) 279, 426, 819, 1137
MslI CAYNNNNRTG 2 cut(s) 506, 1378
MspI CCGG 8 cut(s) 338, 491, 597, 668, 680, 719, 746, 1115
MwoI GCNNNNNNNGC 1 cut(s) 808
NcoI CCATGG 2 cut(s) 44, 246
NdeII GATC 5 cut(s) 114, 292, 345, 482, 1364
NheI GCTAGC 2 cut(s) 49, 883
NlaIV GGNNCC 7 cut(s) 453, 510, 521, 522, 847, 926, 1005
NmeAIII GCCGAG 1 cut(s) 415
NmuCI GTSAC 3 cut(s) 107, 837, 1025
OliI CACNNNNGTG 1 cut(s) 506
PagI TCATGA 3 cut(s) 553, 865, 1379
PcsI WCGNNNNNNNCGW 1 cut(s) 765
PdmI GAANNNNTTC 1 cut(s) 150
PfeI GAWTC 4 cut(s) 239, 399, 946, 1208
PflFI GACNNNGTC 1 cut(s) 1217
PinAI ACCGGT 1 cut(s) 718
PkrI GCNGC 3 cut(s) 286, 388, 433
PleI GAGTC 7 cut(s) 602, 608, 864, 977, 1039, 1208, 1220
PpsI GAGTC 7 cut(s) 602, 608, 864, 977, 1039, 1208, 1220
Ppu21I YACGTR 2 cut(s) 31, 835
PpuMI RGGWCCY 2 cut(s) 520, 925
Psp5II RGGWCCY 2 cut(s) 520, 925
PspN4I GGNNCC 7 cut(s) 453, 510, 521, 522, 847, 926, 1005
PspPI GGNCC 3 cut(s) 452, 520, 925
PspPPI RGGWCCY 2 cut(s) 520, 925
PsuI RGATCY 1 cut(s) 114
PsyI GACNNNGTC 1 cut(s) 1217
RsaI GTAC 1 cut(s) 710
RsaNI GTAC 1 cut(s) 709
RseI CAYNNNNRTG 2 cut(s) 506, 1378
SalI GTCGAC 1 cut(s) 5
SaqAI TTAA 4 cut(s) 279, 426, 819, 1137
SatI GCNGC 3 cut(s) 285, 387, 432
Sau3AI GATC 5 cut(s) 114, 292, 345, 482, 1364
Sau96I GGNCC 3 cut(s) 452, 520, 925
SchI GAGTC 7 cut(s) 602, 609, 865, 978, 1040, 1208, 1220
SfaNI GCATC 3 cut(s) 634, 754, 1243
SinI GGWCC 3 cut(s) 452, 520, 925
SmiMI CAYNNNNRTG 2 cut(s) 506, 1378
Sse9I AATT 3 cut(s) 158, 477, 820
SsiI CCGC 3 cut(s) 285, 386, 647
SspI AATATT 1 cut(s) 1321
SspMI CTAG 4 cut(s) 50, 95, 564, 884
StyI CCWWGG 2 cut(s) 44, 246
TaaI ACNGT 8 cut(s) 273, 309, 330, 456, 505, 516, 713, 915
TaiI ACGT 5 cut(s) 33, 255, 573, 837, 982
TaqI TCGA 5 cut(s) 6, 144, 629, 804, 1229
TaqII GACCGA 1 cut(s) 1207
TasI AATT 3 cut(s) 158, 477, 820
TauI GCSGC 2 cut(s) 287, 389
TfiI GAWTC 4 cut(s) 239, 399, 946, 1208
Tru1I TTAA 4 cut(s) 279, 426, 819, 1137
Tru9I TTAA 4 cut(s) 279, 426, 819, 1137
TscAI CASTG 2 cut(s) 374, 1077
TseFI GTSAC 3 cut(s) 107, 837, 1025
TseI GCWGC 1 cut(s) 431
Tsp45I GTSAC 3 cut(s) 107, 837, 1025
TspDTI ATGAA 5 cut(s) 112, 436, 570, 980, 1304
TspGWI ACGGA 1 cut(s) 647
TspRI CASTG 2 cut(s) 374, 1077
Tth111I GACNNNGTC 1 cut(s) 1217
VpaK11BI GGWCC 3 cut(s) 452, 520, 925
XmiI GTMKAC 1 cut(s) 6
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 4 cut(s) 50, 95, 564, 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.