MD08G1200700.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0013859
Physical Location & Seq
Reverse (-)
26025960 .. 26031241
5282 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1200700.v1.1.491

Sequence Viewer

Length: 2934 bp
ATGGACAACCAGAACACTCAGAGTGGAGGCAAAGGAGTAGGAGGCGGAGGAGCTGCTCTTCACGTGGTGGTGTTTCCATGGCTGGCCATGGGCCACATGATCCCCTTCTTCCACCTCTCCACCCTCATAGCTCAAAAGGGTCACACCGTCTCCTTCGTTTCCACCCCAAGAAACCTCTCCAGACTTCCCAGAATACCCTTCCACCTCTCCTCCCTCATCAACCTCGTCTCCCTCCCTCTTCCCCGCCTTCCTAACCTCCCAAACGACGCCGAATCATCGACCGACGTCCCCTTCCACAAGCAGCAACTACTCAAAACGGCCTTCGACATGCTACAACCCCCGTTGACCGCTTTCCTCGAGTCCTCAAGACCCGACTGGGTTATTTACGACTACACCCCTCACTGGCTTCCCGCCACCGCCGCCAGGCTCGGCGTCTCACGCGCCTTCTTCTGCTGCTTCAACGCCGCCTGCATGTCCTACATCGGCCCGCCGTCCCTTCTAATCAACGGCCAGGATGGGAGGACCAAGGCCGAGGATTTCACGGTGGTCCCCAAGTGGGTCCCGTTGGAGTCCGACATGGCGTATCGGCTCCACGAGATTGCCAAGTGGGTGGAAATATCAAGCGGGGACGAGTCGATCACTCCCGATACGGTGCGTTTTGGTGTTGCTATTGAGGAGAGCGACGTTGTGTTTATTAGAAGCTCCGAGGAGTTGGAGCCCGAGTGGTTAAATTTGATGAGACAACTTTACCGCGAGGTAAAAGTAAAACCCGTTGTTCCGGTCGGATTTTTACCGCCAAACATAGAAGAGGAGGCAAGTGAATTTGATGAAACATGGGGTGGCATTCAAGAGTGGTTGGACAAGCAACGAGTCAACTCAGTTGTTTACGTTGCGCTCGGGACTGAGGCGACACTGAGTCAGGAGGAACTCACCGAGTTGGCTCTCGGGTTGGAGCTATCTGGGGTACCCTTCTTTTGGGTGTTGAGAAACCCGCCCGAGTCGACTCAGTCAGTGTCGGAGATGCTCCCTCCTGGATTTGTGGAACGAGTCAAGGGTCGAGGAGTGGTACACTTGGGGTGGGCTCCGCAAGTGCGGATACTGAGTCATGACTCGGTGGGGGGATTCTTGACTCACTGCGGTTGGAACTCAATGATCGAAGGGCTCGTGTTCGGACGGGTTTTGATGTTTTTTCCGATGGTGAACGACCAAGGGCTTAATGCTCGATTGGGGAACGGGAAGGGGCTCGGGGTGGAAATACCTAGGAACGAGCGAGACGGGTCGTTTGCGGGTGACTCGGTGGCTGAGCTAGTAAGGTTGGCAATGGTGGATGACTCGGGTGAATCGTTAAGGACTAGGGCTAAGGAAATGAGGGATTTGTTTGGAGGTAGAAATAAGAACAGTCGGATGGTGGATGAATTCCTATGTTTTCTTGAGGAGAATAGGCCACCGAGTGGACACAGGTCAATCTCCATGGACAACCAGAACACTCAGAGTGGAGGCCAAGGAGGAGGAGGCGGAGGAGCTGTTCTTCACGTGGTGGTGTTTCCATGGCTGGCCATGGGCCACCTCATCCCCTTCTTCCACCTTTCCACCCTCATAGCTCAAAGGGGTCACACCGTCTCCTTCGTCTCCACCCCAAGGAACCTCTCCAGACTTCCCAAAATACCCTCCCACCTCTCCTCCCTCGTCAACCTCGTCTCCTTCCCTCTCCCCCGCCTCCCTAACCTCCCAAACGACGCCGAATCATCAACCGACGTCCCCTTCCACAAGCAGCAACTACTCAAAACGGCCTTCGACATGCTACAAACCCCGCTGACCGCTTTCCTGGAGTCCTCAAGACCCGACTGGGTTATTTACGACTATGCCCCTCACTGGCTTCCCGCCATAGCCGCCAGGCTCGGCGTCGCACACGCCTTCTTTTTCTGTGTCAACGCCGCCTGCCTGGCCTACCTCGGTCCGCCGTCGGTTCTGATCAGCGGCCAGGATGGGAGGACCAAGGCCGAGGATTTCACGGTGGTCCCCAAGTGGGTCCCGTTCGAGTCCGACATGGCATATCGGCTCCACGAGGTTGCCAAGTGGGTGCAAGCATCAAGCGGGAACGAGTCGGGCACTCCCGATACGGTGCGTTTTGGGGTTGCGATTGAGGAGAGCGACGTTGTGTTTGTTAGAAGCTCTGACGAGTTTGAGCCCGAGTGGTTAAATTTGGTGAGAGAGCTTTACCGCGAGGTAAAAGTAAAACCCGTTGTTCCGGTTGGATTTTTACCGCCTAACATAGAAGAGGAGGCAAGTGAATTTGATGAAACATGGGGTGGCATTAAAGGGTGGTTGGACAAGCAACGAGTCAACTCGGTGGTTTACATTGCACTCGGGACCGAAGCGACACTGAGTCAGGAGGAACTCACCGAGCTGGCTCTCGGGTTGGAGCTGTCCGGGGTACCCTTCTTTTGGGTGTTGAGAAACCCGCCCGAGTCGACTCAGTCAGTGTCTGAGATGCTTCCTCCAGGGTTTTTGGAACGAGTCAAGGGTCGAGGTGTGGTGGACTTGGGGTGGGCTCCGCAGGTGCGCATACTGAGTCATGACTCGGTGGGGGGATTCTTGACTCACTGCGGTTGGAACTCAATGATCGAAGGGCTCATGTTCGGACGGGTTTTGATGTTTTTTCCGATGGTGAACGACCAAGGGCTTAATGCTCGATTGGGGAATGGAAAGGGGCTCGGGGTGGAAATACCTAGGAACGAACGAGATGGGTCGTTTACTCGTGACTCGGTGGCTGAGTTTGTAAGGTTGGCAATGGTGGACGACTCGGGTGAATCGATGAGGATAAGGGCCAAGGAAATGAAGGATTTGTTTGGAGACAGAAATAAGAACAATCGAATAGTGGGTGAATTCATATGTTTTCTCGAAGAGAACAGGCCACCGAGGTGTCCAGAATAA

Protein Analysis

978

Amino Acids

108.46

Weight (kDa)

5.32

Isoelectric Point (pI)

48.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 21 - 157 3.2e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 292 - 419 4e-13 UDP-glucoronosyl and UDP-glucosyl transferase
Glyco_transf_N PF26168 511 - 648 1.7e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 782 - 909 2.1e-13 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2548
AatII GACGTC 2 cut(s) 288, 1758
Acc16I TGCGCA 1 cut(s) 2564
Acc36I ACCTGC 1 cut(s) 2548
Acc65I GGTACC 2 cut(s) 964, 2434
AccB1I GGYRCC 2 cut(s) 964, 2434
AccB7I CCANNNNNTGG 1 cut(s) 1451
AccI GTMKAC 2 cut(s) 1001, 2471
AccII CGCG 3 cut(s) 441, 753, 2223
AclWI GGATC 1 cut(s) 94
AcoI YGGCCR 4 cut(s) 84, 508, 1554, 1978
AcsI RAATTY 6 cut(s) 730, 821, 1415, 2200, 2291, 2885
AcvI CACGTG 2 cut(s) 64, 1534
AcyI GRCGYC 6 cut(s) 267, 285, 432, 1737, 1755, 1902
AdeI CACNNNGTG 3 cut(s) 67, 1451, 1537
AfaI GTAC 3 cut(s) 966, 1068, 2436
AfiI CCNNNNNNNGG 9 cut(s) 402, 423, 556, 975, 1451, 1638, 1872, 2026, 2445
AgsI TTSAA 2 cut(s) 460, 848
AhdI GACNNNNNGTC 2 cut(s) 915, 2385
AjnI CCWGG 8 cut(s) 422, 510, 1030, 1824, 1892, 1941, 1980, 2500
AleI CACNNNNGTG 1 cut(s) 2920
AloI GAACNNNNNNTCC 2 cut(s) 1509, 1541
Alw26I GTCTC 9 cut(s) 154, 232, 439, 733, 1266, 1624, 1633, 1702, 2847
AlwI GGATC 1 cut(s) 94
AlwNI CAGNNNCTG 1 cut(s) 2486
ApeKI GCWGC 4 cut(s) 53, 301, 453, 1771
ApoI RAATTY 6 cut(s) 730, 821, 1415, 2200, 2291, 2885
ArsI GACNNNNNNTTYG 4 cut(s) 1265, 1297, 2144, 2176
Asp718I GGTACC 2 cut(s) 964, 2434
AspA2I CCTAGG 2 cut(s) 1259, 2729
AspLEI GCGC 3 cut(s) 443, 895, 2565
AsuC2I CCSGG 1 cut(s) 2431
AsuHPI GGTGA 9 cut(s) 922, 1210, 1301, 1349, 2218, 2392, 2680, 2819, 2894
AvaII GGWCC 8 cut(s) 522, 547, 559, 1955, 1992, 2017, 2029, 2370
AvrII CCTAGG 2 cut(s) 1259, 2729
BaeGI GKGCMC 1 cut(s) 2111
BalI TGGCCA 2 cut(s) 86, 1556
BanI GGYRCC 2 cut(s) 964, 2434
BanII GRGCYC 8 cut(s) 720, 1084, 1164, 1245, 2190, 2554, 2634, 2715
BauI CACGAG 4 cut(s) 593, 1163, 2063, 2757
BbrPI CACGTG 2 cut(s) 64, 1534
BbvI GCAGC 4 cut(s) 40, 313, 440, 1783
BccI CCATC 6 cut(s) 509, 1189, 1399, 1979, 2659, 2738
BceAI ACGGC 5 cut(s) 333, 475, 523, 1803, 1945
BciT130I CCWGG 8 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2502
BciVI GTATCC 1 cut(s) 1089
BclI TGATCA 1 cut(s) 1971
BcnI CCSGG 1 cut(s) 2431
BcoDI GTCTC 9 cut(s) 154, 232, 439, 733, 1266, 1624, 1633, 1702, 2847
BfaI CTAG 4 cut(s) 1260, 1307, 1353, 2730
BfuAI ACCTGC 1 cut(s) 2548
BfuI GTATCC 1 cut(s) 1089
BglI GCCNNNNNGGC 1 cut(s) 1943
BisI GCNGC 9 cut(s) 54, 302, 420, 454, 465, 1772, 1890, 1935, 1978
BlnI CCTAGG 2 cut(s) 1259, 2729
BlpI GCTNAGC 1 cut(s) 1302
BlsI GCNGC 9 cut(s) 55, 303, 421, 455, 466, 1773, 1891, 1936, 1979
Bme1390I CCNGG 9 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2431, 2502
Bme18I GGWCC 8 cut(s) 522, 547, 559, 1955, 1992, 2017, 2029, 2370
BmeRI GACNNNNNGTC 2 cut(s) 915, 2385
BmrFI CCNGG 9 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2431, 2502
BmrI ACTGGG 2 cut(s) 385, 1855
BmsI GCATC 3 cut(s) 1011, 2096, 2481
BmuI ACTGGG 2 cut(s) 385, 1855
BoxI GACNNNNGTC 2 cut(s) 284, 1459
BpmI CTGGAG 4 cut(s) 163, 1633, 1847, 2484
Bpu10I CCTNAGC 1 cut(s) 1359
Bpu1102I GCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 3 cut(s) 349, 1451, 1819
BpuMI CCSGG 1 cut(s) 2431
Bsa29I ATCGAT 1 cut(s) 2813
BsaAI YACGTR 2 cut(s) 64, 1534
BsaHI GRCGYC 6 cut(s) 267, 285, 432, 1737, 1755, 1902
BsaWI WCCGGW 2 cut(s) 778, 2248
Bsc4I CCNNNNNNNGG 9 cut(s) 402, 423, 556, 975, 1451, 1638, 1872, 2026, 2445
Bse1I ACTGG 4 cut(s) 380, 407, 1850, 1877
Bse3DI GCAATG 3 cut(s) 1326, 2358, 2796
BseBI CCWGG 8 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2502
BseCI ATCGAT 1 cut(s) 2813
BseGI GGATG 6 cut(s) 520, 1333, 1410, 1417, 1569, 1990
BseLI CCNNNNNNNGG 9 cut(s) 402, 423, 556, 975, 1451, 1638, 1872, 2026, 2445
BseMI GCAATG 3 cut(s) 1326, 2358, 2796
BseNI ACTGG 4 cut(s) 380, 407, 1850, 1877
BseSI GKGCMC 1 cut(s) 2111
BseXI GCAGC 4 cut(s) 40, 313, 440, 1783
Bsh1236I CGCG 3 cut(s) 441, 753, 2223
Bsh1285I CGRYCG 2 cut(s) 282, 783
BshNI GGYRCC 2 cut(s) 964, 2434
BshVI ATCGAT 1 cut(s) 2813
BsiEI CGRYCG 2 cut(s) 282, 783
BsiSI CCGG 3 cut(s) 779, 2249, 2430
BslI CCNNNNNNNGG 9 cut(s) 402, 423, 556, 975, 1451, 1638, 1872, 2026, 2445
BsmAI GTCTC 9 cut(s) 154, 232, 439, 733, 1266, 1624, 1633, 1702, 2847
BsmBI CGTCTC 7 cut(s) 154, 232, 439, 1266, 1624, 1633, 1702
BsmI GAATGC 1 cut(s) 843
Bsp1286I GDGCHC 9 cut(s) 720, 1084, 1164, 1245, 2111, 2190, 2554, 2634, 2715
Bsp143I GATC 5 cut(s) 99, 636, 1152, 1971, 2622
Bsp1720I GCTNAGC 1 cut(s) 1302
Bsp19I CCATGG 5 cut(s) 77, 87, 1470, 1547, 1557
BspDI ATCGAT 1 cut(s) 2813
BspFNI CGCG 3 cut(s) 441, 753, 2223
BspHI TCATGA 2 cut(s) 1105, 2575
BspMI ACCTGC 1 cut(s) 2548
BspPI GGATC 1 cut(s) 94
BspQI GCTCTTC 1 cut(s) 63
BspT107I GGYRCC 2 cut(s) 964, 2434
BsrDI GCAATG 3 cut(s) 1326, 2358, 2796
BsrI ACTGG 4 cut(s) 380, 407, 1850, 1877
BssMI GATC 5 cut(s) 99, 636, 1152, 1971, 2622
BssNI GRCGYC 6 cut(s) 267, 285, 432, 1737, 1755, 1902
BssSI CACGAG 4 cut(s) 593, 1163, 2063, 2757
Bst2BI CACGAG 4 cut(s) 593, 1163, 2063, 2757
Bst2UI CCWGG 8 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2502
Bst4CI ACNGT 7 cut(s) 148, 544, 652, 1400, 1618, 2014, 2122
Bst6I CTCTTC 5 cut(s) 63, 243, 801, 2271, 2898
BstACI GRCGYC 6 cut(s) 267, 285, 432, 1737, 1755, 1902
BstBAI YACGTR 2 cut(s) 64, 1534
BstC8I GCNNGC 7 cut(s) 84, 469, 488, 1554, 1939, 2085, 2409
BstDSI CCRYGG 5 cut(s) 77, 87, 1470, 1547, 1557
BstF5I GGATG 6 cut(s) 520, 1333, 1410, 1417, 1569, 1990
BstFNI CGCG 3 cut(s) 441, 753, 2223
BstHHI GCGC 3 cut(s) 443, 895, 2565
BstKTI GATC 5 cut(s) 102, 639, 1155, 1974, 2625
BstMAI GTCTC 9 cut(s) 154, 232, 439, 733, 1266, 1624, 1633, 1702, 2847
BstMBI GATC 5 cut(s) 99, 636, 1152, 1971, 2622
BstMCI CGRYCG 2 cut(s) 282, 783
BstMWI GCNNNNNNNGC 4 cut(s) 419, 438, 1889, 1943
BstNI CCWGG 8 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2502
BstNSI RCATGY 3 cut(s) 331, 475, 1801
BstPAI GACNNNNGTC 2 cut(s) 284, 1459
BstSCI CCNGG 9 cut(s) 422, 510, 1030, 1824, 1892, 1941, 1980, 2429, 2500
BstSLI GKGCMC 1 cut(s) 2111
BstUI CGCG 3 cut(s) 441, 753, 2223
BstV1I GCAGC 4 cut(s) 40, 313, 440, 1783
BstXI CCANNNNNNTGG 1 cut(s) 610
Bsu15I ATCGAT 1 cut(s) 2813
BsuI GTATCC 1 cut(s) 1089
BsuTUI ATCGAT 1 cut(s) 2813
BtgI CCRYGG 5 cut(s) 77, 87, 1470, 1547, 1557
BtsCI GGATG 6 cut(s) 520, 1333, 1410, 1417, 1569, 1990
BtsI GCAGTG 2 cut(s) 1132, 2602
BtsIMutI CAGTG 8 cut(s) 400, 911, 1017, 1132, 1870, 2381, 2487, 2602
BveI ACCTGC 1 cut(s) 2548
Cac8I GCNNGC 7 cut(s) 84, 469, 488, 1554, 1939, 2085, 2409
CaiI CAGNNNCTG 1 cut(s) 2486
CciI TCATGA 2 cut(s) 1105, 2575
CfoI GCGC 3 cut(s) 443, 895, 2565
ClaI ATCGAT 1 cut(s) 2813
CpoI CGGWCCG 1 cut(s) 1955
CseI GACGC 4 cut(s) 275, 421, 1745, 1891
Csp6I GTAC 3 cut(s) 965, 1067, 2435
CspI CGGWCCG 1 cut(s) 1955
CviQI GTAC 3 cut(s) 965, 1067, 2435
DpnI GATC 5 cut(s) 101, 638, 1154, 1973, 2624
DpnII GATC 5 cut(s) 99, 636, 1152, 1971, 2622
DraIII CACNNNGTG 3 cut(s) 67, 1451, 1537
DriI GACNNNNNGTC 2 cut(s) 915, 2385
EaeI YGGCCR 4 cut(s) 84, 508, 1554, 1978
Eam1104I CTCTTC 5 cut(s) 63, 243, 801, 2271, 2898
Eam1105I GACNNNNNGTC 2 cut(s) 915, 2385
EarI CTCTTC 5 cut(s) 63, 243, 801, 2271, 2898
EciI GGCGGA 3 cut(s) 60, 1530, 1947
Eco24I GRGCYC 8 cut(s) 720, 1084, 1164, 1245, 2190, 2554, 2634, 2715
Eco47I GGWCC 8 cut(s) 522, 547, 559, 1955, 1992, 2017, 2029, 2370
Eco72I CACGTG 2 cut(s) 64, 1534
EcoO109I RGGNCCY 2 cut(s) 559, 2029
EcoRI GAATTC 2 cut(s) 1415, 2885
EcoRII CCWGG 8 cut(s) 422, 510, 1030, 1824, 1892, 1941, 1980, 2500
EcoT38I GRGCYC 8 cut(s) 720, 1084, 1164, 1245, 2190, 2554, 2634, 2715
Esp3I CGTCTC 7 cut(s) 154, 232, 439, 1266, 1624, 1633, 1702
FauNDI CATATG 1 cut(s) 2891
FbaI TGATCA 1 cut(s) 1971
FblI GTMKAC 2 cut(s) 1001, 2471
Fnu4HI GCNGC 9 cut(s) 54, 302, 420, 454, 465, 1772, 1890, 1935, 1978
FokI GGATG 6 cut(s) 527, 1340, 1417, 1424, 1556, 1997
FriOI GRGCYC 8 cut(s) 720, 1084, 1164, 1245, 2190, 2554, 2634, 2715
Fsp4HI GCNGC 9 cut(s) 54, 302, 420, 454, 465, 1772, 1890, 1935, 1978
FspAI RTGCGCAY 1 cut(s) 2564
FspBI CTAG 4 cut(s) 1260, 1307, 1353, 2730
FspI TGCGCA 1 cut(s) 2564
GlaI GCGC 3 cut(s) 442, 894, 2564
GluI GCNGC 9 cut(s) 54, 302, 420, 454, 465, 1772, 1890, 1935, 1978
GsuI CTGGAG 4 cut(s) 163, 1633, 1847, 2484
HapII CCGG 3 cut(s) 779, 2249, 2430
HgaI GACGC 4 cut(s) 275, 421, 1745, 1891
HhaI GCGC 3 cut(s) 443, 895, 2565
Hin1I GRCGYC 6 cut(s) 267, 285, 432, 1737, 1755, 1902
Hin6I GCGC 3 cut(s) 441, 893, 2563
HinP1I GCGC 3 cut(s) 441, 893, 2563
HincII GTYRAC 7 cut(s) 345, 874, 1002, 1690, 1930, 2344, 2472
HindII GTYRAC 7 cut(s) 345, 874, 1002, 1690, 1930, 2344, 2472
HpaII CCGG 3 cut(s) 779, 2249, 2430
HphI GGTGA 9 cut(s) 922, 1210, 1301, 1349, 2218, 2392, 2680, 2819, 2894
Hpy99I CGWCG 8 cut(s) 269, 287, 686, 1739, 1757, 1907, 1966, 2156
HpyCH4III ACNGT 7 cut(s) 148, 544, 652, 1400, 1618, 2014, 2122
HpyCH4IV ACGT 7 cut(s) 63, 285, 684, 888, 1533, 1755, 2154
HpyCH4V TGCA 3 cut(s) 471, 2083, 2363
HpyF10VI GCNNNNNNNGC 4 cut(s) 419, 438, 1889, 1943
HpySE526I ACGT 7 cut(s) 63, 285, 684, 888, 1533, 1755, 2154
Hsp92I GRCGYC 6 cut(s) 267, 285, 432, 1737, 1755, 1902
HspAI GCGC 3 cut(s) 441, 893, 2563
KflI GGGWCCC 2 cut(s) 559, 2029
KpnI GGTACC 2 cut(s) 968, 2438
Ksp22I TGATCA 1 cut(s) 1971
Kzo9I GATC 5 cut(s) 99, 636, 1152, 1971, 2622
LguI GCTCTTC 1 cut(s) 63
Lsp1109I GCAGC 4 cut(s) 40, 313, 440, 1783
LweI GCATC 3 cut(s) 1011, 2096, 2481
MaeI CTAG 4 cut(s) 1260, 1307, 1353, 2730
MaeII ACGT 7 cut(s) 63, 285, 684, 888, 1533, 1755, 2154
MaeIII GTNAC 4 cut(s) 140, 1289, 1610, 2759
MalI GATC 5 cut(s) 101, 638, 1154, 1973, 2624
MboI GATC 5 cut(s) 99, 636, 1152, 1971, 2622
MboII GAAGA 9 cut(s) 50, 100, 230, 439, 818, 1520, 1570, 2288, 2915
MhlI GDGCHC 9 cut(s) 720, 1084, 1164, 1245, 2111, 2190, 2554, 2634, 2715
MlsI TGGCCA 2 cut(s) 86, 1556
MluCI AATT 6 cut(s) 730, 821, 1415, 2200, 2291, 2885
MluNI TGGCCA 2 cut(s) 86, 1556
Mox20I TGGCCA 2 cut(s) 86, 1556
MscI TGGCCA 2 cut(s) 86, 1556
MseI TTAA 6 cut(s) 728, 1215, 1346, 2198, 2316, 2685
MslI CAYNNNNRTG 1 cut(s) 2920
Msp20I TGGCCA 2 cut(s) 86, 1556
MspA1I CMGCKG 2 cut(s) 1813, 1977
MspI CCGG 3 cut(s) 779, 2249, 2430
MspR9I CCNGG 9 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2431, 2502
Mva1269I GAATGC 1 cut(s) 843
MvaI CCWGG 8 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2502
MvnI CGCG 3 cut(s) 441, 753, 2223
MwoI GCNNNNNNNGC 4 cut(s) 419, 438, 1889, 1943
NciI CCSGG 1 cut(s) 2431
NcoI CCATGG 5 cut(s) 77, 87, 1470, 1547, 1557
NdeI CATATG 1 cut(s) 2891
NdeII GATC 5 cut(s) 99, 636, 1152, 1971, 2622
NmeAIII GCCGAG 4 cut(s) 408, 556, 1878, 2026
NmuCI GTSAC 4 cut(s) 140, 1289, 1610, 2759
NsbI TGCGCA 1 cut(s) 2564
NspI RCATGY 3 cut(s) 331, 475, 1801
OliI CACNNNNGTG 1 cut(s) 2920
PaeR7I CTCGAG 1 cut(s) 356
PagI TCATGA 2 cut(s) 1105, 2575
PaqCI CACCTGC 1 cut(s) 2548
PciSI GCTCTTC 1 cut(s) 63
PcsI WCGNNNNNNNCGW 4 cut(s) 1161, 1340, 1692, 2810
PctI GAATGC 1 cut(s) 843
PfeI GAWTC 6 cut(s) 272, 1122, 1340, 1742, 2592, 2810
PflFI GACNNNGTC 2 cut(s) 1006, 2476
PflMI CCANNNNNTGG 1 cut(s) 1451
PfoI TCCNGGA 2 cut(s) 1030, 1824
PkrI GCNGC 9 cut(s) 55, 303, 421, 455, 466, 1773, 1891, 1936, 1979
PmaCI CACGTG 2 cut(s) 64, 1534
PmlI CACGTG 2 cut(s) 64, 1534
Ppu21I YACGTR 2 cut(s) 64, 1534
PpuMI RGGWCCY 2 cut(s) 559, 2029
PshAI GACNNNNGTC 2 cut(s) 284, 1459
Psp5II RGGWCCY 2 cut(s) 559, 2029
Psp6I CCWGG 8 cut(s) 422, 510, 1030, 1824, 1892, 1941, 1980, 2500
PspCI CACGTG 2 cut(s) 64, 1534
PspGI CCWGG 8 cut(s) 422, 510, 1030, 1824, 1892, 1941, 1980, 2500
PspPPI RGGWCCY 2 cut(s) 559, 2029
PspXI VCTCGAGB 1 cut(s) 356
PstNI CAGNNNCTG 1 cut(s) 2486
PsyI GACNNNGTC 2 cut(s) 1006, 2476
RsaI GTAC 3 cut(s) 966, 1068, 2436
RsaNI GTAC 3 cut(s) 965, 1067, 2435
RseI CAYNNNNRTG 1 cut(s) 2920
Rsr2I CGGWCCG 1 cut(s) 1955
RsrII CGGWCCG 1 cut(s) 1955
SalI GTCGAC 2 cut(s) 1000, 2470
SapI GCTCTTC 1 cut(s) 63
SaqAI TTAA 6 cut(s) 728, 1215, 1346, 2198, 2316, 2685
SatI GCNGC 9 cut(s) 54, 302, 420, 454, 465, 1772, 1890, 1935, 1978
Sau3AI GATC 5 cut(s) 99, 636, 1152, 1971, 2622
ScrFI CCNGG 9 cut(s) 424, 512, 1032, 1826, 1894, 1943, 1982, 2431, 2502
SduI GDGCHC 9 cut(s) 720, 1084, 1164, 1245, 2111, 2190, 2554, 2634, 2715
SfaNI GCATC 3 cut(s) 1011, 2096, 2481
Sfr274I CTCGAG 1 cut(s) 356
SinI GGWCC 8 cut(s) 522, 547, 559, 1955, 1992, 2017, 2029, 2370
SlaI CTCGAG 1 cut(s) 356
SmiMI CAYNNNNRTG 1 cut(s) 2920
SmlI CTYRAG 4 cut(s) 356, 364, 1430, 1834
SmoI CTYRAG 4 cut(s) 356, 364, 1430, 1834
Sse9I AATT 6 cut(s) 730, 821, 1415, 2200, 2291, 2885
SspMI CTAG 4 cut(s) 1260, 1307, 1353, 2730
StyD4I CCNGG 9 cut(s) 422, 510, 1030, 1824, 1892, 1941, 1980, 2429, 2500
TaaI ACNGT 7 cut(s) 148, 544, 652, 1400, 1618, 2014, 2122
TaiI ACGT 7 cut(s) 66, 288, 687, 891, 1536, 1758, 2157
TaqII GACCGA 3 cut(s) 296, 1943, 2387
TasI AATT 6 cut(s) 730, 821, 1415, 2200, 2291, 2885
TauI GCSGC 5 cut(s) 422, 467, 1892, 1937, 1980
TfiI GAWTC 6 cut(s) 272, 1122, 1340, 1742, 2592, 2810
Tru1I TTAA 6 cut(s) 728, 1215, 1346, 2198, 2316, 2685
Tru9I TTAA 6 cut(s) 728, 1215, 1346, 2198, 2316, 2685
TscAI CASTG 8 cut(s) 407, 918, 1017, 1139, 1877, 2388, 2487, 2609
TseFI GTSAC 4 cut(s) 140, 1289, 1610, 2759
TseI GCWGC 4 cut(s) 53, 301, 453, 1771
Tsp45I GTSAC 4 cut(s) 140, 1289, 1610, 2759
TspDTI ATGAA 5 cut(s) 843, 1428, 2313, 2852, 2878
TspRI CASTG 8 cut(s) 407, 918, 1017, 1139, 1877, 2388, 2487, 2609
Tth111I GACNNNGTC 2 cut(s) 1006, 2476
Van91I CCANNNNNTGG 1 cut(s) 1451
VpaK11BI GGWCC 8 cut(s) 522, 547, 559, 1955, 1992, 2017, 2029, 2370
XapI RAATTY 6 cut(s) 730, 821, 1415, 2200, 2291, 2885
XceI RCATGY 3 cut(s) 331, 475, 1801
XhoI CTCGAG 1 cut(s) 356
XmaJI CCTAGG 2 cut(s) 1259, 2729
XmiI GTMKAC 2 cut(s) 1001, 2471
XspI CTAG 4 cut(s) 1260, 1307, 1353, 2730
ZraI GACGTC 2 cut(s) 286, 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.