Rorug07G0288600

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
28044817 .. 28046340
1524 bp
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UTR
Exon/CDS
Intron
Rorug07G0288600.1

Sequence Viewer

Length: 300 bp
ATGTGCCATCAAACAGATGGTGATGGGAGTCCGAACCAAAATGATCGGAAAAGGCTACGTCCTCCAAGTCGTTCCAAAACATTCAATATTGAAACCAGCTATGCTGCAAAAATTCCGAGACTGGCTTTTTTCACCTTGAGGCAAATTAAAGCTGCCACTAATAACTTTGATCGTGTAAACAACATTGGGGAAGGCAGTTTTGGTTGTGTCGACAAGGTCTATGCGAATTCGTGGACTGTAATTTACATACCTTTGGACAATGTGGGAATGTGGAATGTGAGATATGAGAATTGGGCCTGA

Protein Analysis

99

Amino Acids

11.36

Weight (kDa)

9.34

Isoelectric Point (pI)

40.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 210
AcsI RAATTY 2 cut(s) 111, 226
AgsI TTSAA 2 cut(s) 85, 92
AjuI GAANNNNNNNTTGG 2 cut(s) 183, 215
AluBI AGCT 2 cut(s) 99, 152
AluI AGCT 2 cut(s) 99, 152
Alw26I GTCTC 1 cut(s) 112
AoxI GGCC 1 cut(s) 294
ApeKI GCWGC 2 cut(s) 104, 152
ApoI RAATTY 2 cut(s) 111, 226
AspS9I GGNCC 1 cut(s) 294
AsuHPI GGTGA 2 cut(s) 32, 124
BbvI GCAGC 2 cut(s) 91, 139
BccI CCATC 3 cut(s) 11, 15, 17
BcoDI GTCTC 1 cut(s) 112
BisI GCNGC 2 cut(s) 105, 153
BlsI GCNGC 2 cut(s) 106, 154
BmgT120I GGNCC 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 126
BseNI ACTGG 1 cut(s) 126
BseXI GCAGC 2 cut(s) 91, 139
BshFI GGCC 1 cut(s) 296
BsmAI GTCTC 1 cut(s) 112
BsnI GGCC 1 cut(s) 296
Bsp143I GATC 2 cut(s) 43, 169
BspANI GGCC 1 cut(s) 296
BsrI ACTGG 1 cut(s) 126
BssMI GATC 2 cut(s) 43, 169
Bst4CI ACNGT 1 cut(s) 238
BstKTI GATC 2 cut(s) 46, 172
BstMAI GTCTC 1 cut(s) 112
BstMBI GATC 2 cut(s) 43, 169
BstV1I GCAGC 2 cut(s) 91, 139
BsuRI GGCC 1 cut(s) 296
Cfr13I GGNCC 1 cut(s) 294
CviJI RGCY 5 cut(s) 55, 99, 125, 152, 296
CviKI_1 RGCY 5 cut(s) 55, 99, 125, 152, 296
DpnI GATC 2 cut(s) 45, 171
DpnII GATC 2 cut(s) 43, 169
EcoRI GAATTC 1 cut(s) 226
FaiI YATR 4 cut(s) 102, 222, 248, 285
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 105, 153
Fsp4HI GCNGC 2 cut(s) 105, 153
GluI GCNGC 2 cut(s) 105, 153
HaeIII GGCC 1 cut(s) 296
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HinfI GANTC 1 cut(s) 28
HphI GGTGA 2 cut(s) 32, 124
Hpy166II GTNNAC 3 cut(s) 178, 211, 234
Hpy188I TCNGA 3 cut(s) 33, 48, 117
Hpy8I GTNNAC 3 cut(s) 178, 211, 234
HpyAV CCTTC 1 cut(s) 185
HpyCH4III ACNGT 1 cut(s) 238
HpyCH4IV ACGT 1 cut(s) 58
HpyCH4V TGCA 1 cut(s) 107
HpySE526I ACGT 1 cut(s) 58
Kzo9I GATC 2 cut(s) 43, 169
LpnPI CCDG 2 cut(s) 107, 109
Lsp1109I GCAGC 2 cut(s) 91, 139
MaeII ACGT 1 cut(s) 58
MalI GATC 2 cut(s) 45, 171
MboI GATC 2 cut(s) 43, 169
MluCI AATT 5 cut(s) 111, 144, 226, 240, 289
MlyI GAGTC 1 cut(s) 37
MnlI CCTC 2 cut(s) 72, 132
MseI TTAA 1 cut(s) 147
NdeII GATC 2 cut(s) 43, 169
PflFI GACNNNGTC 1 cut(s) 215
PkrI GCNGC 2 cut(s) 106, 154
PleI GAGTC 1 cut(s) 36
PpsI GAGTC 1 cut(s) 36
PspPI GGNCC 1 cut(s) 294
PsyI GACNNNGTC 1 cut(s) 215
SalI GTCGAC 1 cut(s) 209
SaqAI TTAA 1 cut(s) 147
SatI GCNGC 2 cut(s) 105, 153
Sau3AI GATC 2 cut(s) 43, 169
Sau96I GGNCC 1 cut(s) 294
SchI GAGTC 1 cut(s) 37
SetI ASST 6 cut(s) 61, 101, 137, 154, 219, 253
SgeI CNNG 8 cut(s) 78, 108, 129, 134, 148, 185, 226, 243
SmlI CTYRAG 1 cut(s) 136
SmoI CTYRAG 1 cut(s) 136
Sse9I AATT 5 cut(s) 111, 144, 226, 240, 289
SspI AATATT 1 cut(s) 88
TaaI ACNGT 1 cut(s) 238
TaiI ACGT 1 cut(s) 61
TaqI TCGA 1 cut(s) 210
TasI AATT 5 cut(s) 111, 144, 226, 240, 289
Tru1I TTAA 1 cut(s) 147
Tru9I TTAA 1 cut(s) 147
TseI GCWGC 2 cut(s) 104, 152
Tth111I GACNNNGTC 1 cut(s) 215
XapI RAATTY 2 cut(s) 111, 226
XcmI CCANNNNNNNNNTGG 1 cut(s) 14
XmiI GTMKAC 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.