Rh7AG443000

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0013859
Physical Location & Seq
Forward (+)
60155981 .. 60156922
942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG443000.1

Sequence Viewer

Length: 942 bp
ATGGAGGAGGAGAAACAGATGGATAAAACTGTCTTTTTACACTTCGTGGTGTTCCCATGGCTGGCCATGGGCCATCTCATCCCCTTCTTCCACCTCTCCAAGCTCATAGCTCAAAAGGGTCACAGAGTCTCTTTCATCTCCACCCCGAGAAACCTACTCAGACTTCCCAAAATACCCTCACACTCACCTCTCTCTTCTCTCATAACTCTCGTACCTCTTCCTTTGCCCCACTTTGAAAACCTCCCGGACGACGCCGAGTCCTCCGCCGACGTGCCGTACAACAAGCAGCAATTACTTAAAAAGGCCTTCGACTTGTTGGAATTACCGCTGGCGAATTTTCTCGAGTCTTCGGCTCCCGATTGGGTCGTCTACGACTACGCCTCACACTGGCTTCCCCCACTCGCGGCCAAGCTCGGCGTCCCACGCGCCTTCTTCTGCTGCTTCAACGCCGCGTGTATGGCTGTCGTCGGTCCGCCGTCGTTGTTGATCGACGGTCAGGATTCGAGGACCAAGCCCGAGGATTTCACGGTGGTCCCACCTTGGATTCCGTTTAAATCCGACATGTCGTTCCGGTACCACGAGGTTGCCAAGTACGTGCATGCGAACGAGTCCGGTACGCCCGATACGGTGCGTTTCGGGATTGCGATAAGGGGCGGCGACGTCGTTTTGATGAGAAGCTCTGATGAGTTCGAGCCCGAGTGGTTTGAGCTGCTCAGAGAGATCTACGGGAGGAGCAAACCGGTTCTTCCGGTTGGGTTTTTGCCGCCATTGGTAGAAGAGAAATCTACACGTGTCAAAGACTGGTTGGACAAGCAGCGAGTTAACTCAGTGGTTGACGTGGCACTCGGGACCGAGGCGACTCTGAGTCAAGAAGAACTCACCGAGTTGGCTCTAGGGTTGGAGCTGTCCGGGGCTCCGGGCTACCCTTCTTTTGGGTGTTGA

Protein Analysis

313

Amino Acids

35.07

Weight (kDa)

5.41

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 663
Acc65I GGTACC 1 cut(s) 573
AccB1I GGYRCC 1 cut(s) 573
AccI GTMKAC 1 cut(s) 369
AccII CGCG 3 cut(s) 404, 426, 452
AciI CCGC 7 cut(s) 264, 326, 404, 450, 473, 654, 764
AcoI YGGCCR 2 cut(s) 63, 405
AcsI RAATTY 1 cut(s) 334
AcvI CACGTG 1 cut(s) 791
AcyI GRCGYC 3 cut(s) 252, 417, 660
AdeI CACNNNGTG 1 cut(s) 46
AfaI GTAC 5 cut(s) 213, 278, 575, 593, 616
AfiI CCNNNNNNNGG 4 cut(s) 61, 387, 403, 932
AflIII ACRYGT 3 cut(s) 561, 788, 790
AgeI ACCGGT 1 cut(s) 739
AgsI TTSAA 2 cut(s) 236, 445
AhdI GACNNNNNGTC 2 cut(s) 256, 864
AjiI CACGTC 2 cut(s) 271, 838
AluBI AGCT 6 cut(s) 103, 110, 412, 678, 709, 904
AluI AGCT 6 cut(s) 103, 110, 412, 678, 709, 904
Alw26I GTCTC 1 cut(s) 133
Ama87I CYCGRG 5 cut(s) 145, 341, 515, 695, 845
AoxI GGCC 4 cut(s) 63, 70, 303, 405
ApeKI GCWGC 4 cut(s) 286, 438, 709, 814
ApoI RAATTY 1 cut(s) 334
AsiGI ACCGGT 1 cut(s) 739
Asp718I GGTACC 1 cut(s) 573
AspLEI GCGC 1 cut(s) 428
AspS9I GGNCC 5 cut(s) 70, 470, 507, 532, 849
AsuC2I CCSGG 3 cut(s) 245, 910, 918
AsuHPI GGTGA 2 cut(s) 177, 871
AvaI CYCGRG 5 cut(s) 145, 341, 515, 695, 845
AvaII GGWCC 4 cut(s) 470, 507, 532, 849
BaeI ACNNNNGTAYC 2 cut(s) 195, 228
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 1 cut(s) 573
BanII GRGCYC 2 cut(s) 696, 916
BauI CACGAG 1 cut(s) 578
BbrPI CACGTG 1 cut(s) 791
BbsI GAAGAC 1 cut(s) 339
BbvI GCAGC 4 cut(s) 298, 425, 696, 826
BccI CCATC 2 cut(s) 13, 81
BceAI ACGGC 2 cut(s) 259, 460
BcnI CCSGG 3 cut(s) 245, 910, 918
BcoDI GTCTC 1 cut(s) 133
BfaI CTAG 1 cut(s) 893
BglII AGATCT 1 cut(s) 720
BisI GCNGC 8 cut(s) 287, 405, 439, 450, 655, 710, 764, 815
BlsI GCNGC 8 cut(s) 288, 406, 440, 451, 656, 711, 765, 816
Bme1390I CCNGG 3 cut(s) 245, 910, 918
Bme18I GGWCC 4 cut(s) 470, 507, 532, 849
BmeRI GACNNNNNGTC 2 cut(s) 256, 864
BmeT110I CYCGRG 5 cut(s) 145, 341, 515, 695, 845
BmgBI CACGTC 2 cut(s) 271, 838
BmgT120I GGNCC 5 cut(s) 70, 470, 507, 532, 849
BmiI GGNNCC 5 cut(s) 354, 534, 575, 850, 915
BmrFI CCNGG 3 cut(s) 245, 910, 918
BpiI GAAGAC 1 cut(s) 339
BpuMI CCSGG 3 cut(s) 245, 910, 918
BsaAI YACGTR 2 cut(s) 595, 791
BsaHI GRCGYC 3 cut(s) 252, 417, 660
BsaJI CCNNGG 6 cut(s) 56, 66, 516, 539, 852, 909
BsaWI WCCGGW 4 cut(s) 570, 611, 739, 748
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 387, 403, 932
Bse118I RCCGGY 1 cut(s) 739
Bse1I ACTGG 2 cut(s) 392, 806
BseDI CCNNGG 6 cut(s) 56, 66, 516, 539, 852, 909
BseGI GGATG 1 cut(s) 78
BseLI CCNNNNNNNGG 4 cut(s) 61, 387, 403, 932
BseMII CTCAG 4 cut(s) 172, 727, 840, 854
BseNI ACTGG 2 cut(s) 392, 806
BseRI GAGGAG 3 cut(s) 20, 23, 745
BseXI GCAGC 4 cut(s) 298, 425, 696, 826
Bsh1236I CGCG 3 cut(s) 404, 426, 452
BshFI GGCC 4 cut(s) 65, 72, 305, 407
BshNI GGYRCC 1 cut(s) 573
BshTI ACCGGT 1 cut(s) 739
BsiHKCI CYCGRG 5 cut(s) 145, 341, 515, 695, 845
BsiSI CCGG 7 cut(s) 245, 571, 612, 740, 749, 909, 917
BslFI GGGAC 3 cut(s) 404, 518, 862
BslI CCNNNNNNNGG 4 cut(s) 61, 387, 403, 932
BsmAI GTCTC 1 cut(s) 133
BsmFI GGGAC 3 cut(s) 404, 518, 862
BsnI GGCC 4 cut(s) 65, 72, 305, 407
BsoBI CYCGRG 5 cut(s) 145, 341, 515, 695, 845
Bsp1286I GDGCHC 2 cut(s) 696, 916
Bsp143I GATC 2 cut(s) 486, 720
Bsp19I CCATGG 2 cut(s) 56, 66
BspACI CCGC 7 cut(s) 264, 326, 404, 450, 473, 654, 764
BspANI GGCC 4 cut(s) 65, 72, 305, 407
BspCNI CTCAG 4 cut(s) 171, 726, 839, 855
BspFNI CGCG 3 cut(s) 404, 426, 452
BspLI GGNNCC 5 cut(s) 354, 534, 575, 850, 915
BspT107I GGYRCC 1 cut(s) 573
BsrFI RCCGGY 1 cut(s) 739
BsrI ACTGG 2 cut(s) 392, 806
BssAI RCCGGY 1 cut(s) 739
BssECI CCNNGG 6 cut(s) 56, 66, 516, 539, 852, 909
BssMI GATC 2 cut(s) 486, 720
BssNI GRCGYC 3 cut(s) 252, 417, 660
BssSI CACGAG 1 cut(s) 578
BssT1I CCWWGG 3 cut(s) 56, 66, 539
Bst2BI CACGAG 1 cut(s) 578
Bst4CI ACNGT 4 cut(s) 31, 494, 529, 628
Bst6I CTCTTC 3 cut(s) 199, 222, 771
BstACI GRCGYC 3 cut(s) 252, 417, 660
BstBAI YACGTR 2 cut(s) 595, 791
BstC8I GCNNGC 3 cut(s) 63, 330, 600
BstDEI CTNAG 4 cut(s) 158, 713, 826, 863
BstDSI CCRYGG 2 cut(s) 56, 66
BstF5I GGATG 1 cut(s) 78
BstFNI CGCG 3 cut(s) 404, 426, 452
BstHHI GCGC 1 cut(s) 428
BstKTI GATC 2 cut(s) 489, 723
BstMAI GTCTC 1 cut(s) 133
BstMBI GATC 2 cut(s) 486, 720
BstMWI GCNNNNNNNGC 2 cut(s) 423, 458
BstNSI RCATGY 2 cut(s) 565, 602
BstSCI CCNGG 3 cut(s) 243, 908, 916
BstUI CGCG 3 cut(s) 404, 426, 452
BstV1I GCAGC 4 cut(s) 298, 425, 696, 826
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 1 cut(s) 720
BstYI RGATCY 1 cut(s) 720
BsuRI GGCC 4 cut(s) 65, 72, 305, 407
BtgI CCRYGG 2 cut(s) 56, 66
BtrI CACGTC 2 cut(s) 271, 838
BtsCI GGATG 1 cut(s) 78
BtsIMutI CAGTG 2 cut(s) 385, 834
Cac8I GCNNGC 3 cut(s) 63, 330, 600
CfoI GCGC 1 cut(s) 428
Cfr10I RCCGGY 1 cut(s) 739
Cfr13I GGNCC 5 cut(s) 70, 470, 507, 532, 849
CpoI CGGWCCG 1 cut(s) 470
CseI GACGC 2 cut(s) 260, 406
Csp6I GTAC 5 cut(s) 212, 277, 574, 592, 615
CspAI ACCGGT 1 cut(s) 739
CspI CGGWCCG 1 cut(s) 470
CviAII CATG 4 cut(s) 57, 67, 562, 599
CviQI GTAC 5 cut(s) 212, 277, 574, 592, 615
DdeI CTNAG 4 cut(s) 158, 713, 826, 863
DpnI GATC 2 cut(s) 488, 722
DpnII GATC 2 cut(s) 486, 720
DraI TTTAAA 1 cut(s) 553
DraIII CACNNNGTG 1 cut(s) 46
DriI GACNNNNNGTC 2 cut(s) 256, 864
EaeI YGGCCR 2 cut(s) 63, 405
Eam1104I CTCTTC 3 cut(s) 199, 222, 771
Eam1105I GACNNNNNGTC 2 cut(s) 256, 864
EarI CTCTTC 3 cut(s) 199, 222, 771
EciI GGCGGA 2 cut(s) 253, 462
Eco130I CCWWGG 3 cut(s) 56, 66, 539
Eco147I AGGCCT 1 cut(s) 305
Eco24I GRGCYC 2 cut(s) 696, 916
Eco47I GGWCC 4 cut(s) 470, 507, 532, 849
Eco72I CACGTG 1 cut(s) 791
Eco88I CYCGRG 5 cut(s) 145, 341, 515, 695, 845
EcoT14I CCWWGG 3 cut(s) 56, 66, 539
EcoT38I GRGCYC 2 cut(s) 696, 916
ErhI CCWWGG 3 cut(s) 56, 66, 539
FaeI CATG 4 cut(s) 60, 70, 565, 602
FaiI YATR 7 cut(s) 58, 68, 107, 203, 458, 563, 600
FaqI GGGAC 3 cut(s) 404, 518, 862
FatI CATG 4 cut(s) 56, 66, 561, 598
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 8 cut(s) 287, 405, 439, 450, 655, 710, 764, 815
FokI GGATG 1 cut(s) 65
FriOI GRGCYC 2 cut(s) 696, 916
Fsp4HI GCNGC 8 cut(s) 287, 405, 439, 450, 655, 710, 764, 815
FspBI CTAG 1 cut(s) 893
GlaI GCGC 1 cut(s) 427
GluI GCNGC 8 cut(s) 287, 405, 439, 450, 655, 710, 764, 815
HaeIII GGCC 4 cut(s) 65, 72, 305, 407
HapII CCGG 7 cut(s) 245, 571, 612, 740, 749, 909, 917
HgaI GACGC 2 cut(s) 260, 406
HhaI GCGC 1 cut(s) 428
Hin1I GRCGYC 3 cut(s) 252, 417, 660
Hin1II CATG 4 cut(s) 60, 70, 565, 602
Hin6I GCGC 1 cut(s) 426
HinP1I GCGC 1 cut(s) 426
HincII GTYRAC 2 cut(s) 823, 835
HindII GTYRAC 2 cut(s) 823, 835
HinfI GANTC 8 cut(s) 126, 257, 344, 500, 544, 608, 859, 865
HpaI GTTAAC 1 cut(s) 823
HpaII CCGG 7 cut(s) 245, 571, 612, 740, 749, 909, 917
HphI GGTGA 2 cut(s) 177, 871
Hpy166II GTNNAC 3 cut(s) 370, 823, 835
Hpy188I TCNGA 5 cut(s) 161, 559, 682, 716, 864
Hpy188III TCNNGA 6 cut(s) 341, 356, 497, 637, 847, 869
Hpy8I GTNNAC 3 cut(s) 370, 823, 835
Hpy99I CGWCG 7 cut(s) 254, 272, 470, 481, 494, 662, 665
HpyAV CCTTC 4 cut(s) 94, 316, 439, 936
HpyCH4III ACNGT 4 cut(s) 31, 494, 529, 628
HpyCH4IV ACGT 5 cut(s) 270, 594, 660, 790, 837
HpyCH4V TGCA 1 cut(s) 598
HpyF10VI GCNNNNNNNGC 2 cut(s) 423, 458
HpyF3I CTNAG 4 cut(s) 158, 713, 826, 863
HpySE526I ACGT 5 cut(s) 270, 594, 660, 790, 837
Hsp92I GRCGYC 3 cut(s) 252, 417, 660
Hsp92II CATG 4 cut(s) 60, 70, 565, 602
HspAI GCGC 1 cut(s) 426
KpnI GGTACC 1 cut(s) 577
KspAI GTTAAC 1 cut(s) 823
Kzo9I GATC 2 cut(s) 486, 720
LmnI GCTCC 4 cut(s) 358, 732, 901, 919
Lsp1109I GCAGC 4 cut(s) 298, 425, 696, 826
MaeI CTAG 1 cut(s) 893
MaeII ACGT 5 cut(s) 270, 594, 660, 790, 837
MaeIII GTNAC 1 cut(s) 119
MalI GATC 2 cut(s) 488, 722
MboI GATC 2 cut(s) 486, 720
MboII GAAGA 8 cut(s) 79, 186, 209, 339, 424, 737, 788, 884
MflI RGATCY 1 cut(s) 720
MhlI GDGCHC 2 cut(s) 696, 916
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 3 cut(s) 290, 320, 334
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 6 cut(s) 135, 266, 353, 617, 853, 874
MmeI TCCRAC 4 cut(s) 297, 582, 786, 879
Mox20I TGGCCA 1 cut(s) 65
MscI TGGCCA 1 cut(s) 65
MseI TTAA 3 cut(s) 297, 552, 822
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 328
MspI CCGG 7 cut(s) 245, 571, 612, 740, 749, 909, 917
MspR9I CCNGG 3 cut(s) 245, 910, 918
MvnI CGCG 3 cut(s) 404, 426, 452
MwoI GCNNNNNNNGC 2 cut(s) 423, 458
NciI CCSGG 3 cut(s) 245, 910, 918
NcoI CCATGG 2 cut(s) 56, 66
NdeII GATC 2 cut(s) 486, 720
NlaIII CATG 4 cut(s) 60, 70, 565, 602
NlaIV GGNNCC 5 cut(s) 354, 534, 575, 850, 915
NmeAIII GCCGAG 2 cut(s) 280, 393
NmuCI GTSAC 1 cut(s) 119
NspI RCATGY 2 cut(s) 565, 602
PaeI GCATGC 1 cut(s) 602
PaeR7I CTCGAG 1 cut(s) 341
PceI AGGCCT 1 cut(s) 305
PciI ACATGT 1 cut(s) 561
PfeI GAWTC 2 cut(s) 500, 544
PfoI TCCNGGA 1 cut(s) 243
PinAI ACCGGT 1 cut(s) 739
PkrI GCNGC 8 cut(s) 288, 406, 440, 451, 656, 711, 765, 816
PleI GAGTC 6 cut(s) 134, 265, 352, 616, 853, 873
PmaCI CACGTG 1 cut(s) 791
PmlI CACGTG 1 cut(s) 791
PpsI GAGTC 6 cut(s) 134, 265, 352, 616, 853, 873
Ppu21I YACGTR 2 cut(s) 595, 791
PscI ACATGT 1 cut(s) 561
PspCI CACGTG 1 cut(s) 791
PspN4I GGNNCC 5 cut(s) 354, 534, 575, 850, 915
PspPI GGNCC 5 cut(s) 70, 470, 507, 532, 849
PsuI RGATCY 1 cut(s) 720
RsaI GTAC 5 cut(s) 213, 278, 575, 593, 616
RsaNI GTAC 5 cut(s) 212, 277, 574, 592, 615
Rsr2I CGGWCCG 1 cut(s) 470
RsrII CGGWCCG 1 cut(s) 470
SaqAI TTAA 3 cut(s) 297, 552, 822
SatI GCNGC 8 cut(s) 287, 405, 439, 450, 655, 710, 764, 815
Sau3AI GATC 2 cut(s) 486, 720
Sau96I GGNCC 5 cut(s) 70, 470, 507, 532, 849
SchI GAGTC 6 cut(s) 135, 266, 353, 617, 853, 874
ScrFI CCNGG 3 cut(s) 245, 910, 918
SduI GDGCHC 2 cut(s) 696, 916
Sfr274I CTCGAG 1 cut(s) 341
SinI GGWCC 4 cut(s) 470, 507, 532, 849
SlaI CTCGAG 1 cut(s) 341
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
SphI GCATGC 1 cut(s) 602
Sse9I AATT 3 cut(s) 290, 320, 334
SseBI AGGCCT 1 cut(s) 305
SsiI CCGC 7 cut(s) 264, 326, 404, 450, 473, 654, 764
SspMI CTAG 1 cut(s) 893
StuI AGGCCT 1 cut(s) 305
StyD4I CCNGG 3 cut(s) 243, 908, 916
StyI CCWWGG 3 cut(s) 56, 66, 539
TaaI ACNGT 4 cut(s) 31, 494, 529, 628
TaiI ACGT 5 cut(s) 273, 597, 663, 793, 840
TaqI TCGA 5 cut(s) 309, 342, 489, 503, 690
TaqII GACCGA 2 cut(s) 458, 866
TasI AATT 3 cut(s) 290, 320, 334
TauI GCSGC 4 cut(s) 407, 452, 657, 766
TfiI GAWTC 2 cut(s) 500, 544
Tru1I TTAA 3 cut(s) 297, 552, 822
Tru9I TTAA 3 cut(s) 297, 552, 822
TscAI CASTG 2 cut(s) 392, 834
TseFI GTSAC 1 cut(s) 119
TseI GCWGC 4 cut(s) 286, 438, 709, 814
Tsp45I GTSAC 1 cut(s) 119
TspDTI ATGAA 1 cut(s) 124
TspGWI ACGGA 1 cut(s) 537
TspRI CASTG 2 cut(s) 392, 834
VpaK11BI GGWCC 4 cut(s) 470, 507, 532, 849
XapI RAATTY 1 cut(s) 334
XceI RCATGY 2 cut(s) 565, 602
XhoI CTCGAG 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 369
XspI CTAG 1 cut(s) 893
ZraI GACGTC 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.