Prupe.1G534200_v2.0.a1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013859
Physical Location & Seq
Reverse (-)
43671887 .. 43673758
1872 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G534200.1

Sequence Viewer

Length: 1434 bp
ATGGAGAAGGAGAAGAAGAATGGAGTTCTTCATGTGGTGGTGTTTCCATGGCTGGCCATGGGCCACCTCATACCCTTCTTCCATCTATCCAAGCTCATAGCTCAAAAGGGTCACTCTGTTTCTTTCATCTCCACCCCAAGGAACATTCTCAGACTTCCCAAAATACCCTCACACCTCTCTTCTCTCATCAACCTCGTTTCCCTCCCTTTGCCCCGCTTGGACAACCTCCCAAACGACGCCGAATCGTCCACGGACGTGCCGTACAACAAGCAGCAATTGCTGAAAAGGGCCTTCGATTTGCTGGAATTGCCGTTGACCGATTTCCTGGGGTCCTCGGAGTCAAAGCCTGATTGGGTTATTTACGATTATGCCTCTCACTGGCTTCCCCCAGTTGCGGCCAGGTTCGACATCTCACGCGCCTTCTTCAGCTGCTTCAGCGCCGCGTGTTTGGCGTACATTGGTCCGCCCGCGCCGTTGATCAACGGCCAGGATTTCAGGACCAATGCTGAGGATTTCACCTTGGTTCCCGAGTGGGTCCCATTCGAGTCTGACATGGCGTACCGGCTTCACGAGATTGCTAAGTATTTACAACGTTCAAGTGAGAACGAGTCCGTTACACCCGATACGGTGCGTTTCGGGTTTGCGATTAATGAGAGTGAAGTTGTGTTTATTAGAAGCTCGGATGAGTTTGAGCCCGAGTGGTTCAATTTGCTTAGAGAGCTGTATGGGAAGGGAAAACCAGTTGTTCCTATTGGGTTTTTACCCCCACTAATAAATGAGCAAGTGGATGAATTTGATACAAATTGGGTTGGTATCAACGAGTGGCTTGACAAGCAACGAGTCAACTCAGTGATCTACATTGCAGTCGGGACCGAGGCAACATTGAGTCGAGAAGAACTCACTGAGTTGGCTCTCGGGTTGGAGCTATCTGGAGTACCGTTCTTTTGGGTGTTGAGAAACCCACCTGAGTCAACTCAGTCCGTGTTTGAGATGTTACCACATGGGTTTGTGGAACGAGTCGAGGGTCGTGGAGTGGTACATTTGGGGTGGGCTCCACAAGTGCGGATACTGAGTCATGACTCGGTGGGTGGATTCTTGACTCACTGTGGTTGGAACTCGATGATTGAAGGGCTCGGGTTCGGGCGGGTTTTGATCCTATTCCCCATGGTGAATGATCAAGGGCTTAATGCTAGATTAGGGAATAATAAGGGACTTGGGGTGGAGATACCTAGAATTGCACAAGACGGGTCATTTACGCGTGACTCGGTGGCCAAGCTCGTAAGGTTGGCAATGGTGGAGGACTCGGGTGAGTCACTAAGAATTAGGGCTAAGGAAATGAAGGGGTTGTTTGGAGACAGAAATAGGAACAATCAAATAGCGGATGAATTCATATGCTTTCTTGAGGAGAATAGCCCACCAAGGTTGACCATTTAG

Protein Analysis

478

Amino Acids

53.76

Weight (kDa)

5.29

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49690
fragaria_vesca FvH4_5g34510
malus_domestica MD08G1200700.v1.1
prunus_persica Prupe.1G534200_v2.0.a1
pyrus_communis pycom08g17420 pycom08g17430
rosa_chinensis RchiOBHm_Chr7g0235171
rosa_laevigata RLG00000001177
rosa_multiflora Rmu_sc0004657.1_g000008 Rmu_sc0015485.1_g000005
rosa_roxburghii Rroxscaffold_3G00226240
rosa_rugosa Rorug07G0288600
rosa_samantha Rh7AG443000 Rh7AG443100 Rh7BG416000 Rh7CG464200
rosa_wichuraiana Rw7G036840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 4 cut(s) 417, 443, 470, 1258
AciI CCGC 8 cut(s) 214, 395, 441, 464, 468, 1063, 1144, 1379
AclI AACGTT 1 cut(s) 592
AclWI GGATC 1 cut(s) 1147
AcoI YGGCCR 4 cut(s) 54, 396, 484, 1269
AcsI RAATTY 2 cut(s) 791, 1385
AcuI CTGAAG 2 cut(s) 409, 418
AcyI GRCGYC 1 cut(s) 237
AfaI GTAC 5 cut(s) 263, 455, 560, 936, 1038
AfiI CCNNNNNNNGG 3 cut(s) 138, 378, 394
AflIII ACRYGT 1 cut(s) 1256
AgsI TTSAA 3 cut(s) 597, 706, 1127
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 3 cut(s) 324, 398, 486
AleI CACNNNNGTG 1 cut(s) 254
AluBI AGCT 7 cut(s) 94, 101, 429, 678, 721, 925, 1276
AluI AGCT 7 cut(s) 94, 101, 429, 678, 721, 925, 1276
Alw26I GTCTC 1 cut(s) 1347
AlwI GGATC 1 cut(s) 1147
Ama87I CYCGRG 5 cut(s) 527, 695, 914, 1133, 1303
AoxI GGCC 6 cut(s) 54, 61, 288, 396, 484, 1269
ApeKI GCWGC 2 cut(s) 271, 429
ApoI RAATTY 2 cut(s) 791, 1385
AseI ATTAAT 1 cut(s) 648
AspLEI GCGC 3 cut(s) 419, 440, 472
AspS9I GGNCC 7 cut(s) 61, 288, 330, 461, 498, 535, 870
AsuHPI GGTGA 3 cut(s) 508, 1180, 1319
AvaI CYCGRG 5 cut(s) 527, 695, 914, 1133, 1303
AvaII GGWCC 5 cut(s) 330, 461, 498, 535, 870
BalI TGGCCA 2 cut(s) 56, 1271
BanII GRGCYC 3 cut(s) 696, 1054, 1134
BauI CACGAG 1 cut(s) 569
BbvCI CCTCAGC 1 cut(s) 507
BbvI GCAGC 2 cut(s) 283, 416
BccI CCATC 1 cut(s) 90
BceAI ACGGC 4 cut(s) 244, 295, 457, 499
BciT130I CCWGG 3 cut(s) 326, 400, 488
BciVI GTATCC 1 cut(s) 1059
BclI TGATCA 2 cut(s) 477, 1174
BcoDI GTCTC 1 cut(s) 1347
BfaI CTAG 2 cut(s) 1191, 1230
BfoI RGCGCY 1 cut(s) 441
BfuI GTATCC 1 cut(s) 1059
BisI GCNGC 4 cut(s) 272, 396, 430, 441
BlsI GCNGC 4 cut(s) 273, 397, 431, 442
Bme1390I CCNGG 3 cut(s) 326, 400, 488
Bme18I GGWCC 5 cut(s) 330, 461, 498, 535, 870
BmeT110I CYCGRG 5 cut(s) 527, 695, 914, 1133, 1303
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 7 cut(s) 61, 288, 330, 461, 498, 535, 870
BmiI GGNNCC 6 cut(s) 331, 525, 536, 537, 871, 1053
BmrFI CCNGG 3 cut(s) 326, 400, 488
BmrI ACTGGG 1 cut(s) 383
BmuI ACTGGG 1 cut(s) 383
BplI GAGNNNNNCTC 2 cut(s) 882, 914
BpmI CTGGAG 1 cut(s) 951
Bpu10I CCTNAGC 2 cut(s) 507, 1329
BpuEI CTTGAG 1 cut(s) 1421
BsaHI GRCGYC 1 cut(s) 237
Bsc4I CCNNNNNNNGG 3 cut(s) 138, 378, 394
Bse118I RCCGGY 1 cut(s) 561
Bse1I ACTGG 3 cut(s) 383, 389, 740
Bse3DI GCAATG 2 cut(s) 858, 1296
BseBI CCWGG 3 cut(s) 326, 400, 488
BseGI GGATG 3 cut(s) 688, 793, 1387
BseLI CCNNNNNNNGG 3 cut(s) 138, 378, 394
BseMI GCAATG 2 cut(s) 858, 1296
BseMII CTCAG 7 cut(s) 163, 498, 861, 894, 957, 989, 1061
BseNI ACTGG 3 cut(s) 383, 389, 740
BseRI GAGGAG 1 cut(s) 1418
BseXI GCAGC 2 cut(s) 283, 416
Bsh1236I CGCG 4 cut(s) 417, 443, 470, 1258
BshFI GGCC 6 cut(s) 56, 63, 290, 398, 486, 1271
BsiHKCI CYCGRG 5 cut(s) 527, 695, 914, 1133, 1303
BsiSI CCGG 1 cut(s) 562
BslFI GGGAC 3 cut(s) 521, 883, 1224
BslI CCNNNNNNNGG 3 cut(s) 138, 378, 394
BsmAI GTCTC 1 cut(s) 1347
BsmFI GGGAC 3 cut(s) 521, 883, 1224
BsnI GGCC 6 cut(s) 56, 63, 290, 398, 486, 1271
BsoBI CYCGRG 5 cut(s) 527, 695, 914, 1133, 1303
Bsp1286I GDGCHC 3 cut(s) 696, 1054, 1134
Bsp143I GATC 4 cut(s) 477, 852, 1152, 1174
Bsp19I CCATGG 3 cut(s) 47, 57, 1164
BspACI CCGC 8 cut(s) 214, 395, 441, 464, 468, 1063, 1144, 1379
BspANI GGCC 6 cut(s) 56, 63, 290, 398, 486, 1271
BspCNI CTCAG 7 cut(s) 162, 499, 860, 895, 958, 988, 1062
BspFNI CGCG 4 cut(s) 417, 443, 470, 1258
BspHI TCATGA 1 cut(s) 1075
BspLI GGNNCC 6 cut(s) 331, 525, 536, 537, 871, 1053
BspPI GGATC 1 cut(s) 1147
BsrDI GCAATG 2 cut(s) 858, 1296
BsrFI RCCGGY 1 cut(s) 561
BsrI ACTGG 3 cut(s) 383, 389, 740
BssAI RCCGGY 1 cut(s) 561
BssMI GATC 4 cut(s) 477, 852, 1152, 1174
BssNI GRCGYC 1 cut(s) 237
BssSI CACGAG 1 cut(s) 569
BssT1I CCWWGG 6 cut(s) 47, 57, 137, 519, 1164, 1418
Bst2BI CACGAG 1 cut(s) 569
Bst2UI CCWGG 3 cut(s) 326, 400, 488
Bst4CI ACNGT 3 cut(s) 628, 939, 1106
Bst6I CTCTTC 1 cut(s) 184
BstACI GRCGYC 1 cut(s) 237
BstAPI GCANNNNNTGC 1 cut(s) 277
BstC8I GCNNGC 2 cut(s) 54, 468
BstDSI CCRYGG 4 cut(s) 47, 57, 249, 1164
BstF5I GGATG 3 cut(s) 688, 793, 1387
BstFNI CGCG 4 cut(s) 417, 443, 470, 1258
BstH2I RGCGCY 1 cut(s) 441
BstHHI GCGC 3 cut(s) 419, 440, 472
BstKTI GATC 4 cut(s) 480, 855, 1155, 1177
BstMAI GTCTC 1 cut(s) 1347
BstMBI GATC 4 cut(s) 477, 852, 1152, 1174
BstMWI GCNNNNNNNGC 6 cut(s) 277, 307, 435, 449, 718, 832
BstNI CCWGG 3 cut(s) 326, 400, 488
BstSCI CCNGG 3 cut(s) 324, 398, 486
BstUI CGCG 4 cut(s) 417, 443, 470, 1258
BstV1I GCAGC 2 cut(s) 283, 416
BsuI GTATCC 1 cut(s) 1059
BsuRI GGCC 6 cut(s) 56, 63, 290, 398, 486, 1271
BtgI CCRYGG 4 cut(s) 47, 57, 249, 1164
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 3 cut(s) 688, 793, 1387
BtsIMutI CAGTG 4 cut(s) 376, 855, 900, 1102
Cac8I GCNNGC 2 cut(s) 54, 468
CciI TCATGA 1 cut(s) 1075
CfoI GCGC 3 cut(s) 419, 440, 472
Cfr10I RCCGGY 1 cut(s) 561
Cfr13I GGNCC 7 cut(s) 61, 288, 330, 461, 498, 535, 870
CseI GACGC 1 cut(s) 245
Csp6I GTAC 5 cut(s) 262, 454, 559, 935, 1037
CspCI CAANNNNNGTGG 1 cut(s) 1404
CviAII CATG 7 cut(s) 32, 48, 58, 553, 1001, 1076, 1165
CviQI GTAC 5 cut(s) 262, 454, 559, 935, 1037
DpnI GATC 4 cut(s) 479, 854, 1154, 1176
DpnII GATC 4 cut(s) 477, 852, 1152, 1174
EaeI YGGCCR 4 cut(s) 54, 396, 484, 1269
Eam1104I CTCTTC 1 cut(s) 184
EarI CTCTTC 1 cut(s) 184
EciI GGCGGA 1 cut(s) 453
Eco130I CCWWGG 6 cut(s) 47, 57, 137, 519, 1164, 1418
Eco24I GRGCYC 3 cut(s) 696, 1054, 1134
Eco47I GGWCC 5 cut(s) 330, 461, 498, 535, 870
Eco57I CTGAAG 2 cut(s) 409, 418
Eco88I CYCGRG 5 cut(s) 527, 695, 914, 1133, 1303
EcoO109I RGGNCCY 3 cut(s) 288, 330, 535
EcoRI GAATTC 1 cut(s) 1385
EcoRII CCWGG 3 cut(s) 324, 398, 486
EcoT14I CCWWGG 6 cut(s) 47, 57, 137, 519, 1164, 1418
EcoT38I GRGCYC 3 cut(s) 696, 1054, 1134
ErhI CCWWGG 6 cut(s) 47, 57, 137, 519, 1164, 1418
FaeI CATG 7 cut(s) 35, 51, 61, 556, 1004, 1079, 1168
FaqI GGGAC 3 cut(s) 521, 883, 1224
FatI CATG 7 cut(s) 31, 47, 57, 552, 1000, 1075, 1164
FauI CCCGC 3 cut(s) 221, 475, 1137
FauNDI CATATG 1 cut(s) 1391
FbaI TGATCA 2 cut(s) 477, 1174
Fnu4HI GCNGC 4 cut(s) 272, 396, 430, 441
FokI GGATG 3 cut(s) 695, 800, 1394
FriOI GRGCYC 3 cut(s) 696, 1054, 1134
Fsp4HI GCNGC 4 cut(s) 272, 396, 430, 441
FspBI CTAG 2 cut(s) 1191, 1230
GlaI GCGC 3 cut(s) 418, 439, 471
GluI GCNGC 4 cut(s) 272, 396, 430, 441
GsuI CTGGAG 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 441
HaeIII GGCC 6 cut(s) 56, 63, 290, 398, 486, 1271
HapII CCGG 1 cut(s) 562
HgaI GACGC 1 cut(s) 245
HhaI GCGC 3 cut(s) 419, 440, 472
Hin1I GRCGYC 1 cut(s) 237
Hin1II CATG 7 cut(s) 35, 51, 61, 556, 1004, 1079, 1168
Hin6I GCGC 3 cut(s) 417, 438, 470
HinP1I GCGC 3 cut(s) 417, 438, 470
HincII GTYRAC 4 cut(s) 315, 844, 972, 1425
HindII GTYRAC 4 cut(s) 315, 844, 972, 1425
HpaII CCGG 1 cut(s) 562
HphI GGTGA 3 cut(s) 508, 1180, 1319
Hpy166II GTNNAC 5 cut(s) 249, 315, 844, 972, 1425
Hpy188I TCNGA 4 cut(s) 152, 337, 550, 682
Hpy188III TCNNGA 9 cut(s) 496, 527, 569, 868, 890, 930, 1076, 1096, 1400
Hpy8I GTNNAC 5 cut(s) 249, 315, 844, 972, 1425
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 6 cut(s) 85, 301, 430, 724, 1121, 1333
HpyCH4III ACNGT 3 cut(s) 628, 939, 1106
HpyCH4IV ACGT 2 cut(s) 255, 592
HpyCH4V TGCA 2 cut(s) 863, 1238
HpyF10VI GCNNNNNNNGC 6 cut(s) 277, 307, 435, 449, 718, 832
HpySE526I ACGT 2 cut(s) 255, 592
Hsp92I GRCGYC 1 cut(s) 237
Hsp92II CATG 7 cut(s) 35, 51, 61, 556, 1004, 1079, 1168
HspAI GCGC 3 cut(s) 417, 438, 470
KflI GGGWCCC 1 cut(s) 535
Ksp22I TGATCA 2 cut(s) 477, 1174
Kzo9I GATC 4 cut(s) 477, 852, 1152, 1174
LmnI GCTCC 2 cut(s) 922, 1057
Lsp1109I GCAGC 2 cut(s) 283, 416
MaeI CTAG 2 cut(s) 1191, 1230
MaeII ACGT 2 cut(s) 255, 592
MaeIII GTNAC 5 cut(s) 110, 613, 993, 1259, 1311
MalI GATC 4 cut(s) 479, 854, 1154, 1176
MboI GATC 4 cut(s) 477, 852, 1152, 1174
MboII GAAGA 7 cut(s) 20, 25, 28, 70, 171, 415, 905
MfeI CAATTG 1 cut(s) 275
MhlI GDGCHC 3 cut(s) 696, 1054, 1134
MlsI TGGCCA 2 cut(s) 56, 1271
MluCI AATT 8 cut(s) 275, 305, 706, 791, 802, 1233, 1320, 1385
MluI ACGCGT 1 cut(s) 1256
MluNI TGGCCA 2 cut(s) 56, 1271
MmeI TCCRAC 2 cut(s) 900, 1091
Mox20I TGGCCA 2 cut(s) 56, 1271
MscI TGGCCA 2 cut(s) 56, 1271
MseI TTAA 2 cut(s) 648, 1185
MslI CAYNNNNRTG 1 cut(s) 254
Msp20I TGGCCA 2 cut(s) 56, 1271
MspA1I CMGCKG 1 cut(s) 429
MspI CCGG 1 cut(s) 562
MspR9I CCNGG 3 cut(s) 326, 400, 488
MunI CAATTG 1 cut(s) 275
MvaI CCWGG 3 cut(s) 326, 400, 488
MvnI CGCG 4 cut(s) 417, 443, 470, 1258
MwoI GCNNNNNNNGC 6 cut(s) 277, 307, 435, 449, 718, 832
NcoI CCATGG 3 cut(s) 47, 57, 1164
NdeI CATATG 1 cut(s) 1391
NdeII GATC 4 cut(s) 477, 852, 1152, 1174
NlaIII CATG 7 cut(s) 35, 51, 61, 556, 1004, 1079, 1168
NlaIV GGNNCC 6 cut(s) 331, 525, 536, 537, 871, 1053
NmuCI GTSAC 3 cut(s) 110, 1259, 1311
OliI CACNNNNGTG 1 cut(s) 254
PagI TCATGA 1 cut(s) 1075
PcsI WCGNNNNNNNCGW 1 cut(s) 257
PfeI GAWTC 2 cut(s) 242, 1092
PkrI GCNGC 4 cut(s) 273, 397, 431, 442
PpuMI RGGWCCY 2 cut(s) 330, 535
PshBI ATTAAT 1 cut(s) 648
Psp1406I AACGTT 1 cut(s) 592
Psp5II RGGWCCY 2 cut(s) 330, 535
Psp6I CCWGG 3 cut(s) 324, 398, 486
PspGI CCWGG 3 cut(s) 324, 398, 486
PspN4I GGNNCC 6 cut(s) 331, 525, 536, 537, 871, 1053
PspPI GGNCC 7 cut(s) 61, 288, 330, 461, 498, 535, 870
PspPPI RGGWCCY 2 cut(s) 330, 535
PvuII CAGCTG 1 cut(s) 429
RsaI GTAC 5 cut(s) 263, 455, 560, 936, 1038
RsaNI GTAC 5 cut(s) 262, 454, 559, 935, 1037
RseI CAYNNNNRTG 1 cut(s) 254
SaqAI TTAA 2 cut(s) 648, 1185
SatI GCNGC 4 cut(s) 272, 396, 430, 441
Sau3AI GATC 4 cut(s) 477, 852, 1152, 1174
Sau96I GGNCC 7 cut(s) 61, 288, 330, 461, 498, 535, 870
ScrFI CCNGG 3 cut(s) 326, 400, 488
SduI GDGCHC 3 cut(s) 696, 1054, 1134
SinI GGWCC 5 cut(s) 330, 461, 498, 535, 870
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 1400
SmoI CTYRAG 1 cut(s) 1400
Sse9I AATT 8 cut(s) 275, 305, 706, 791, 802, 1233, 1320, 1385
SsiI CCGC 8 cut(s) 214, 395, 441, 464, 468, 1063, 1144, 1379
SspMI CTAG 2 cut(s) 1191, 1230
StyD4I CCNGG 3 cut(s) 324, 398, 486
StyI CCWWGG 6 cut(s) 47, 57, 137, 519, 1164, 1418
TaaI ACNGT 3 cut(s) 628, 939, 1106
TaiI ACGT 2 cut(s) 258, 595
TaqI TCGA 6 cut(s) 294, 405, 543, 889, 1020, 1118
TaqII GACCGA 2 cut(s) 332, 887
TasI AATT 8 cut(s) 275, 305, 706, 791, 802, 1233, 1320, 1385
TauI GCSGC 2 cut(s) 398, 443
TfiI GAWTC 2 cut(s) 242, 1092
Tru1I TTAA 2 cut(s) 648, 1185
Tru9I TTAA 2 cut(s) 648, 1185
TscAI CASTG 4 cut(s) 383, 855, 907, 1109
TseFI GTSAC 3 cut(s) 110, 1259, 1311
TseI GCWGC 2 cut(s) 271, 429
Tsp45I GTSAC 3 cut(s) 110, 1259, 1311
TspDTI ATGAA 6 cut(s) 20, 115, 804, 1352, 1378, 1398
TspGWI ACGGA 3 cut(s) 266, 601, 970
TspRI CASTG 4 cut(s) 383, 855, 907, 1109
VpaK11BI GGWCC 5 cut(s) 330, 461, 498, 535, 870
VspI ATTAAT 1 cut(s) 648
XapI RAATTY 2 cut(s) 791, 1385
XspI CTAG 2 cut(s) 1191, 1230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.