Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009237

Physical Location & Seq

Genomic Coordinates Forward (+)

21688763 .. 21692480

Gene Structure 3718 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G53450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCACTTTGTGGTGTTTGTTCGACTCCAAATCTGCCGAATTTACAAGTGTTTCGTTCTGTTAGGAACTCGAGCATTGGTTATAAACGAAACCATAGTCTATGGCAGCTCAGAAGTTCATCATTTCGTGCTAAATCTGTGATATTTCATTGTTCATCGTCCTTAAGACAGTCACCATCTAATGTGGAGGAGATAGATGATAATCCTTCGGTATCATTAGAGGATGAATCAGCACATGTGATGCAGTTCAAGTGGTCTGATTTTAGGATTCTTGATCGTGTTAGCATTGGTCATGGCGGCAGGGCTGATGAGCTTGTGTTTGAAGCTATAGTTCAGGTTCCAGATAGCCCTTTGTTTAACCAAGGAGTTGTTCTTCGGAAATTGAATACCACTCGAGCTCAAAGACGAGGAAGAAGAGCTATAGAAGTTTTTAAGAAGCTAGTTCGTCGGAGACTTCTCTACCATTCTTACTCAATGCAAGTTCACGGTTATATCACCAATAACTTAAGCGATGATCAGTACTCATTTACCCTTGTACATGGGTGCCATGGAAGTTTCTCGATTAGGCACTGGCTTCAACAATCTGATTGGATTCCAACATTAGAAGCTACTCTTGCATTAGATGAAGAATCCTTTCGAAGGGTGGGTGATGATACTACTGGAGGGCCTGCAGTTTCAAGGCAGTTAAGACTAATCCGTACACTAATGAGGGATATTTTGATCGGAGTCAATTACTTGCACAGCCATGGTCTGGCTCACACAGAACTGAGATTGGAAAATGTGCATATTAGCCCTGTGGATAGACATATCAAAGTAGGGATTCTCGGAAATGCTGCTGACTTTAACGGGGATGTTCCAAGTACTAGCAACGCTTACAGTACCATGGACAGACGACAAATGATGATAGCATTTGACATGAGATGTGTTGGATTCATGATGGCAAAAATGGTACTTCAAGAATTGATGGATCCATTAATCTTTGCGAAATTGAAGTCTTTCCTGGCAAAGGGGAATGATCCTTCCTCGCTGCGGGAGTTTTTTGTGACGACGCTCAATACAAACTCTGAATCTGGAAATACCGGAGTGCAAATACTTGATAGAAACTGGGGAGCAGGTTGGCACCTTTTATCTTTGTTAATTGCTACCAGACCTTCTGAAAGAATAAGTTGCTTGGATGCTCTTAAGCATCCCTTTCTATGTGGACCAAGATGGCGTGTTGCCCCATCAATGGATATCATCAGATGGGGTCTTGGATCAACCGCAGTAAAGATTTCAGAAGAATACATTTACCGCATGCCTCAGCGCCAAAGACTTGCCCACTTCATTGGACTGATGGAGATGCTAAATCCTTATCCAAAGCCAAACTGTTGGTTGGAGCTTTTACCGGGAAGATGGCGTCTTTTATACTCAACTGGAAAGCACATAGGTCTAACTCTGCGTCAGCCTTCCACACGTGCCTTAATAGGCAACGTTCACTTAACGATAACTCGAGCTTCAGAATCCATAAACAACACTTCACTTTCCTTTACCTCTGATATACGCTTCACTGCCATAACCAGCAAAGACTGGCCACACAACAAAATCGGAGCTGCTGGGAAATTACAAACGCTCTCTCAATTCAGACTAATAGCTGGAAAAAGACTTTACCTCAAAGAAGAGAAAAAGAACATTGGTAAGTTCTCAATGGGTGAACCAGATGCTGAAGAAGGTTTAGCCGAGAAGCTTGAAACCGAGAAATGGAAAAAAGTCGTGCCCTTCAAGGAGTTTCCGTCGAGTCTTCCTGTAGCAAAACTCGTCTCTGGAGAAATCGAAGTGACGATGAACATGAATGATCATATAGATTCACCTGGGAGTGTGATTGGAGAAGTTAGAAAGCAAATTCCGCCGGAAATGTTCGATCTTTCTAAGCTTGTGTGTGGGACTTATATAGACAGTAGGTTACTTGTACTTAGGTGTGTAAATGGTTCAGCATTGTTGTTCACAAGGTCCAGCTTGGACCATAAGTCTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAP_fibrillin Pkinase

Protein Analysis

670

Amino Acids

75.77

Weight (kDa)

9.43

Isoelectric Point (pI)

49.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	230 - 399	6.6e-08	Protein kinase domain
PAP_fibrillin	PF04755	434 - 506	6.6e-06	PAP_fibrillin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53450 AT5G53450 AT5G53450
fragaria_vesca	FvH4_7g31750 FvH4_7g31750 FvH4_7g31750
malus_domestica	MD01G1219800.v1.1
prunus_persica	Prupe.2G311400_v2.0.a1 Prupe.2G311400_v2.0.a1
pyrus_communis	pycom01g22960
rosa_chinensis	RchiOBHm_Chr1g0380971
rosa_laevigata	RLG00000026255
rosa_multiflora	Rmu_sc0013826.1_g000005 Rmu_sc0013826.1_g000006
rosa_roxburghii	Rroxscaffold_4G00278890
rosa_rugosa	Rorug01G0426000 Rorug01G0426100
rosa_samantha	Rh1AG450000 Rh1BG405800 Rh1CG419800 Rh1DG436300
rosa_wichuraiana	Rw1G039200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	84
Acc36I	ACCTGC	1 cut(s)	1103
AccB1I	GGYRCC	2 cut(s)	543, 1119
AccB7I	CCANNNNNTGG	1 cut(s)	751
AciI	CCGC	5 cut(s)	297, 1030, 1260, 1291, 1883
AclI	AACGTT	1 cut(s)	1470
AclWI	GGATC	4 cut(s)	962, 975, 1010, 1261
AcoI	YGGCCR	1 cut(s)	1568
AcsI	RAATTY	2 cut(s)	40, 1878
AcuI	CTGAAG	2 cut(s)	1479, 1722
AcvI	CACGTG	1 cut(s)	1454
AcyI	GRCGYC	1 cut(s)	1396
AdeI	CACNNNGTG	1 cut(s)	11
AfaI	GTAC	7 cut(s)	521, 537, 700, 862, 880, 951, 1947
AfiI	CCNNNNNNNGG	6 cut(s)	639, 751, 1006, 1029, 1228, 1737
AflII	CTTAAG	3 cut(s)	163, 505, 1181
AflIII	ACRYGT	2 cut(s)	235, 1451
AgsI	TTSAA	9 cut(s)	250, 323, 385, 578, 678, 956, 991, 1727, 1759
AhdI	GACNNNNNGTC	1 cut(s)	2002
AjnI	CCWGG	2 cut(s)	999, 1846
AjuI	GAANNNNNNNTTGG	2 cut(s)	354, 386
Alw21I	GWGCWC	1 cut(s)	400
Alw26I	GTCTC	2 cut(s)	445, 1801
AlwI	GGATC	4 cut(s)	962, 975, 1010, 1261
AlwNI	CAGNNNCTG	1 cut(s)	1700
Ama87I	CYCGRG	3 cut(s)	70, 393, 1488
AoxI	GGCC	2 cut(s)	665, 1568
ApeKI	GCWGC	4 cut(s)	106, 833, 1027, 1589
ApoI	RAATTY	2 cut(s)	40, 1878
ArsI	GACNNNNNNTTYG	4 cut(s)	82, 114, 977, 1009
AseI	ATTAAT	1 cut(s)	974
Asp700I	GAANNNNTTC	2 cut(s)	633, 995
AspLEI	GCGC	1 cut(s)	1305
AspS9I	GGNCC	4 cut(s)	665, 1202, 1986, 1996
AsuC2I	CCSGG	1 cut(s)	1386
AsuHPI	GGTGA	5 cut(s)	165, 487, 659, 1700, 1836
AsuII	TTCGAA	1 cut(s)	637
AvaI	CYCGRG	3 cut(s)	70, 393, 1488
AvaII	GGWCC	3 cut(s)	1202, 1986, 1996
BaeGI	GKGCMC	1 cut(s)	1755
BalI	TGGCCA	1 cut(s)	1570
BamHI	GGATCC	1 cut(s)	967
BanI	GGYRCC	2 cut(s)	543, 1119
BanII	GRGCYC	1 cut(s)	400
BbrPI	CACGTG	1 cut(s)	1454
BbsI	GAAGAC	1 cut(s)	1769
Bbv12I	GWGCWC	1 cut(s)	400
BbvCI	CCTCAGC	1 cut(s)	1299
BbvI	GCAGC	4 cut(s)	118, 820, 1014, 1576
BccI	CCATC	8 cut(s)	184, 931, 958, 1203, 1231, 1236, 1327, 1386
BciT130I	CCWGG	2 cut(s)	1001, 1848
BclI	TGATCA	2 cut(s)	514, 1831
BcnI	CCSGG	1 cut(s)	1386
BcoDI	GTCTC	2 cut(s)	445, 1801
BfaI	CTAG	2 cut(s)	440, 864
BfmI	CTRYAG	4 cut(s)	327, 420, 669, 1782
BfoI	RGCGCY	1 cut(s)	1306
BfrI	CTTAAG	3 cut(s)	163, 505, 1181
BfuAI	ACCTGC	1 cut(s)	1103
BisI	GCNGC	5 cut(s)	107, 298, 834, 1028, 1590
BlsI	GCNGC	5 cut(s)	108, 299, 835, 1029, 1591
BmcAI	AGTACT	2 cut(s)	521, 862
Bme1390I	CCNGG	3 cut(s)	1001, 1386, 1848
Bme18I	GGWCC	3 cut(s)	1202, 1986, 1996
BmeRI	GACNNNNNGTC	1 cut(s)	2002
BmeT110I	CYCGRG	3 cut(s)	70, 393, 1488
BmgT120I	GGNCC	4 cut(s)	665, 1202, 1986, 1996
BmiI	GGNNCC	4 cut(s)	339, 545, 969, 1121
BmrFI	CCNGG	3 cut(s)	1001, 1386, 1848
BmrI	ACTGGG	1 cut(s)	1114
BmsI	GCATC	5 cut(s)	231, 1165, 1195, 1329, 1687
BmuI	ACTGGG	1 cut(s)	1114
BpiI	GAAGAC	1 cut(s)	1769
BpmI	CTGGAG	2 cut(s)	681, 1821
Bpu10I	CCTNAGC	1 cut(s)	1299
Bpu14I	TTCGAA	1 cut(s)	637
BpuMI	CCSGG	1 cut(s)	1386
BsaAI	YACGTR	1 cut(s)	1454
BsaBI	GATNNNNATC	1 cut(s)	201
BsaHI	GRCGYC	1 cut(s)	1396
BsaJI	CCNNGG	5 cut(s)	361, 547, 745, 882, 1847
BsaWI	WCCGGW	1 cut(s)	1079
BsaXI	ACNNNNNCTCC	2 cut(s)	1754, 1784
Bsc4I	CCNNNNNNNGG	6 cut(s)	639, 751, 1006, 1029, 1228, 1737
Bse1I	ACTGG	5 cut(s)	575, 664, 1109, 1417, 1571
Bse8I	GATNNNNATC	1 cut(s)	201
BseBI	CCWGG	2 cut(s)	1001, 1848
BseDI	CCNNGG	5 cut(s)	361, 547, 745, 882, 1847
BseGI	GGATG	4 cut(s)	229, 856, 1180, 1186
BseJI	GATNNNNATC	1 cut(s)	201
BseLI	CCNNNNNNNGG	6 cut(s)	639, 751, 1006, 1029, 1228, 1737
BseMII	CTCAG	3 cut(s)	124, 758, 1313
BseNI	ACTGG	5 cut(s)	575, 664, 1109, 1417, 1571
BseRI	GAGGAG	1 cut(s)	203
BseSI	GKGCMC	1 cut(s)	1755
BseXI	GCAGC	4 cut(s)	118, 820, 1014, 1576
BseYI	CCCAGC	1 cut(s)	1592
BshFI	GGCC	2 cut(s)	667, 1570
BshNI	GGYRCC	2 cut(s)	543, 1119
BsiHKAI	GWGCWC	1 cut(s)	400
BsiHKCI	CYCGRG	3 cut(s)	70, 393, 1488
BsiSI	CCGG	3 cut(s)	1080, 1385, 1886
BslFI	GGGAC	1 cut(s)	1933
BslI	CCNNNNNNNGG	6 cut(s)	639, 751, 1006, 1029, 1228, 1737
BsmAI	GTCTC	2 cut(s)	445, 1801
BsmBI	CGTCTC	1 cut(s)	1801
BsmFI	GGGAC	1 cut(s)	1933
BsnI	GGCC	2 cut(s)	667, 1570
BsoBI	CYCGRG	3 cut(s)	70, 393, 1488
Bsp119I	TTCGAA	1 cut(s)	637
Bsp1286I	GDGCHC	2 cut(s)	400, 1755
Bsp1407I	TGTACA	1 cut(s)	535
Bsp143I	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
Bsp19I	CCATGG	3 cut(s)	547, 745, 882
BspACI	CCGC	5 cut(s)	297, 1030, 1260, 1291, 1883
BspANI	GGCC	2 cut(s)	667, 1570
BspCNI	CTCAG	3 cut(s)	123, 759, 1312
BspHI	TCATGA	1 cut(s)	933
BspLI	GGNNCC	4 cut(s)	339, 545, 969, 1121
BspMAI	CTGCAG	1 cut(s)	673
BspMI	ACCTGC	1 cut(s)	1103
BspPI	GGATC	4 cut(s)	962, 975, 1010, 1261
BspQI	GCTCTTC	1 cut(s)	409
BspT104I	TTCGAA	1 cut(s)	637
BspT107I	GGYRCC	2 cut(s)	543, 1119
BspTI	CTTAAG	3 cut(s)	163, 505, 1181
BsrGI	TGTACA	1 cut(s)	535
BsrI	ACTGG	5 cut(s)	575, 664, 1109, 1417, 1571
BssECI	CCNNGG	5 cut(s)	361, 547, 745, 882, 1847
BssMI	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
BssNI	GRCGYC	1 cut(s)	1396
BssT1I	CCWWGG	4 cut(s)	361, 547, 745, 882
Bst2UI	CCWGG	2 cut(s)	1001, 1848
Bst4CI	ACNGT	5 cut(s)	171, 488, 878, 1367, 1934
Bst6I	CTCTTC	2 cut(s)	409, 1650
BstACI	GRCGYC	1 cut(s)	1396
BstAFI	CTTAAG	3 cut(s)	163, 505, 1181
BstAUI	TGTACA	1 cut(s)	535
BstBAI	YACGTR	1 cut(s)	1454
BstBI	TTCGAA	1 cut(s)	637
BstC8I	GCNNGC	2 cut(s)	669, 1295
BstDEI	CTNAG	5 cut(s)	110, 767, 1299, 1905, 1949
BstDSI	CCRYGG	3 cut(s)	547, 745, 882
BstENI	CCTNNNNNAGG	2 cut(s)	637, 1004
BstF5I	GGATG	4 cut(s)	229, 856, 1180, 1186
BstH2I	RGCGCY	1 cut(s)	1306
BstHHI	GCGC	1 cut(s)	1305
BstKTI	GATC	8 cut(s)	277, 517, 723, 970, 1018, 1256, 1834, 1900
BstMAI	GTCTC	2 cut(s)	445, 1801
BstMBI	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
BstMWI	GCNNNNNNNGC	2 cut(s)	614, 1882
BstNI	CCWGG	2 cut(s)	1001, 1848
BstNSI	RCATGY	2 cut(s)	239, 1297
BstSCI	CCNGG	3 cut(s)	999, 1384, 1846
BstSFI	CTRYAG	4 cut(s)	327, 420, 669, 1782
BstSLI	GKGCMC	1 cut(s)	1755
BstV1I	GCAGC	4 cut(s)	118, 820, 1014, 1576
BstV2I	GAAGAC	1 cut(s)	1769
BstX2I	RGATCY	1 cut(s)	967
BstXI	CCANNNNNNTGG	2 cut(s)	1325, 1368
BstYI	RGATCY	1 cut(s)	967
BsuRI	GGCC	2 cut(s)	667, 1570
BtgI	CCRYGG	3 cut(s)	547, 745, 882
BtgZI	GCGATG	1 cut(s)	525
BtsCI	GGATG	4 cut(s)	229, 856, 1180, 1186
BtsI	GCAGTG	1 cut(s)	1545
BtsIMutI	CAGTG	2 cut(s)	568, 1545
BveI	ACCTGC	1 cut(s)	1103
Cac8I	GCNNGC	2 cut(s)	669, 1295
CaiI	CAGNNNCTG	1 cut(s)	1700
CciI	TCATGA	1 cut(s)	933
CfoI	GCGC	1 cut(s)	1305
Cfr13I	GGNCC	4 cut(s)	665, 1202, 1986, 1996
CseI	GACGC	3 cut(s)	1057, 1385, 1427
Csp6I	GTAC	7 cut(s)	520, 536, 699, 861, 879, 950, 1946
CviQI	GTAC	7 cut(s)	520, 536, 699, 861, 879, 950, 1946
DdeI	CTNAG	5 cut(s)	110, 767, 1299, 1905, 1949
DpnI	GATC	8 cut(s)	276, 516, 722, 969, 1017, 1255, 1833, 1899
DpnII	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
DraIII	CACNNNGTG	1 cut(s)	11
DriI	GACNNNNNGTC	1 cut(s)	2002
EaeI	YGGCCR	1 cut(s)	1568
Eam1104I	CTCTTC	2 cut(s)	409, 1650
Eam1105I	GACNNNNNGTC	1 cut(s)	2002
EarI	CTCTTC	2 cut(s)	409, 1650
EciI	GGCGGA	1 cut(s)	1872
Ecl136II	GAGCTC	1 cut(s)	398
Eco130I	CCWWGG	4 cut(s)	361, 547, 745, 882
Eco24I	GRGCYC	1 cut(s)	400
Eco32I	GATATC	1 cut(s)	1234
Eco47I	GGWCC	3 cut(s)	1202, 1986, 1996
Eco53kI	GAGCTC	1 cut(s)	398
Eco57I	CTGAAG	2 cut(s)	1479, 1722
Eco72I	CACGTG	1 cut(s)	1454
Eco88I	CYCGRG	3 cut(s)	70, 393, 1488
EcoICRI	GAGCTC	1 cut(s)	398
EcoNI	CCTNNNNNAGG	2 cut(s)	637, 1004
EcoO109I	RGGNCCY	1 cut(s)	665
EcoRII	CCWGG	2 cut(s)	999, 1846
EcoRV	GATATC	1 cut(s)	1234
EcoT14I	CCWWGG	4 cut(s)	361, 547, 745, 882
EcoT38I	GRGCYC	1 cut(s)	400
ErhI	CCWWGG	4 cut(s)	361, 547, 745, 882
Esp3I	CGTCTC	1 cut(s)	1801
FalI	AAGNNNNNCTT	4 cut(s)	597, 629, 1175, 1207
FaqI	GGGAC	1 cut(s)	1933
FauI	CCCGC	1 cut(s)	1023
FbaI	TGATCA	2 cut(s)	514, 1831
Fnu4HI	GCNGC	5 cut(s)	107, 298, 834, 1028, 1590
FokI	GGATG	4 cut(s)	236, 863, 1173, 1187
FriOI	GRGCYC	1 cut(s)	400
Fsp4HI	GCNGC	5 cut(s)	107, 298, 834, 1028, 1590
FspBI	CTAG	2 cut(s)	440, 864
GlaI	GCGC	1 cut(s)	1304
GluI	GCNGC	5 cut(s)	107, 298, 834, 1028, 1590
GsaI	CCCAGC	1 cut(s)	1596
GsuI	CTGGAG	2 cut(s)	681, 1821
HaeII	RGCGCY	1 cut(s)	1306
HaeIII	GGCC	2 cut(s)	667, 1570
HapII	CCGG	3 cut(s)	1080, 1385, 1886
HgaI	GACGC	3 cut(s)	1057, 1385, 1427
HhaI	GCGC	1 cut(s)	1305
Hin1I	GRCGYC	1 cut(s)	1396
Hin6I	GCGC	1 cut(s)	1303
HinP1I	GCGC	1 cut(s)	1303
HindIII	AAGCTT	2 cut(s)	1721, 1907
HpaII	CCGG	3 cut(s)	1080, 1385, 1886
HphI	GGTGA	5 cut(s)	165, 487, 659, 1700, 1836
Hpy166II	GTNNAC	6 cut(s)	484, 701, 1202, 1474, 1691, 1980
Hpy188III	TCNNGA	7 cut(s)	272, 341, 559, 934, 956, 1071, 1800
Hpy8I	GTNNAC	6 cut(s)	484, 701, 1202, 1474, 1691, 1980
Hpy99I	CGWCG	3 cut(s)	450, 1051, 1774
HpyAV	CCTTC	7 cut(s)	216, 633, 1029, 1161, 1455, 1700, 1765
HpyCH4III	ACNGT	5 cut(s)	171, 488, 878, 1367, 1934
HpyCH4IV	ACGT	2 cut(s)	1453, 1470
HpyCH4V	TGCA	7 cut(s)	244, 478, 617, 671, 739, 784, 1087
HpyF10VI	GCNNNNNNNGC	2 cut(s)	614, 1882
HpyF3I	CTNAG	5 cut(s)	110, 767, 1299, 1905, 1949
HpySE526I	ACGT	2 cut(s)	1453, 1470
Hsp92I	GRCGYC	1 cut(s)	1396
HspAI	GCGC	1 cut(s)	1303
Ksp22I	TGATCA	2 cut(s)	514, 1831
Kzo9I	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
LguI	GCTCTTC	1 cut(s)	409
LmnI	GCTCC	3 cut(s)	1109, 1375, 1586
Lsp1109I	GCAGC	4 cut(s)	118, 820, 1014, 1576
LweI	GCATC	5 cut(s)	231, 1165, 1195, 1329, 1687
MaeI	CTAG	2 cut(s)	440, 864
MaeII	ACGT	2 cut(s)	1453, 1470
MaeIII	GTNAC	4 cut(s)	171, 1042, 1813, 1938
MalI	GATC	8 cut(s)	276, 516, 722, 969, 1017, 1255, 1833, 1899
MboI	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
MboII	GAAGA	9 cut(s)	365, 423, 426, 638, 1289, 1401, 1667, 1715, 1769
MflI	RGATCY	1 cut(s)	967
MhlI	GDGCHC	2 cut(s)	400, 1755
MlsI	TGGCCA	1 cut(s)	1570
MluCI	AATT	9 cut(s)	40, 380, 730, 959, 986, 1137, 1598, 1616, 1878
MluNI	TGGCCA	1 cut(s)	1570
MlyI	GAGTC	3 cut(s)	19, 735, 1783
MmeI	TCCRAC	4 cut(s)	428, 620, 907, 1353
MnlI	CCTC	9 cut(s)	181, 214, 401, 656, 702, 1033, 1308, 1540, 1658
Mox20I	TGGCCA	1 cut(s)	1570
MroXI	GAANNNNTTC	2 cut(s)	633, 995
MscI	TGGCCA	1 cut(s)	1570
MslI	CAYNNNNRTG	1 cut(s)	744
Msp20I	TGGCCA	1 cut(s)	1570
MspCI	CTTAAG	3 cut(s)	163, 505, 1181
MspI	CCGG	3 cut(s)	1080, 1385, 1886
MspR9I	CCNGG	3 cut(s)	1001, 1386, 1848
MvaI	CCWGG	2 cut(s)	1001, 1848
MwoI	GCNNNNNNNGC	2 cut(s)	614, 1882
NciI	CCSGG	1 cut(s)	1386
NcoI	CCATGG	3 cut(s)	547, 745, 882
NdeII	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
NlaIV	GGNNCC	4 cut(s)	339, 545, 969, 1121
NmeAIII	GCCGAG	1 cut(s)	1741
NmuCI	GTSAC	3 cut(s)	171, 1042, 1813
NspI	RCATGY	2 cut(s)	239, 1297
NspV	TTCGAA	1 cut(s)	637
PaeI	GCATGC	1 cut(s)	1297
PaeR7I	CTCGAG	3 cut(s)	70, 393, 1488
PagI	TCATGA	1 cut(s)	933
PciI	ACATGT	1 cut(s)	235
PciSI	GCTCTTC	1 cut(s)	409
PdmI	GAANNNNTTC	2 cut(s)	633, 995
PfeI	GAWTC	9 cut(s)	227, 268, 592, 629, 820, 930, 1067, 1499, 1841
PflMI	CCANNNNNTGG	1 cut(s)	751
PkrI	GCNGC	5 cut(s)	108, 299, 835, 1029, 1591
PleI	GAGTC	3 cut(s)	19, 734, 1782
PmaCI	CACGTG	1 cut(s)	1454
PmlI	CACGTG	1 cut(s)	1454
PpsI	GAGTC	3 cut(s)	19, 734, 1782
Ppu21I	YACGTR	1 cut(s)	1454
PscI	ACATGT	1 cut(s)	235
PshBI	ATTAAT	1 cut(s)	974
PsiI	TTATAA	1 cut(s)	84
Psp124BI	GAGCTC	1 cut(s)	400
Psp1406I	AACGTT	1 cut(s)	1470
Psp6I	CCWGG	2 cut(s)	999, 1846
PspCI	CACGTG	1 cut(s)	1454
PspFI	CCCAGC	1 cut(s)	1592
PspGI	CCWGG	2 cut(s)	999, 1846
PspN4I	GGNNCC	4 cut(s)	339, 545, 969, 1121
PspPI	GGNCC	4 cut(s)	665, 1202, 1986, 1996
PspXI	VCTCGAGB	3 cut(s)	70, 393, 1488
PstI	CTGCAG	1 cut(s)	673
PstNI	CAGNNNCTG	1 cut(s)	1700
PsuI	RGATCY	1 cut(s)	967
RsaI	GTAC	7 cut(s)	521, 537, 700, 862, 880, 951, 1947
RsaNI	GTAC	7 cut(s)	520, 536, 699, 861, 879, 950, 1946
RseI	CAYNNNNRTG	1 cut(s)	744
SacI	GAGCTC	1 cut(s)	400
SapI	GCTCTTC	1 cut(s)	409
SatI	GCNGC	5 cut(s)	107, 298, 834, 1028, 1590
Sau3AI	GATC	8 cut(s)	274, 514, 720, 967, 1015, 1253, 1831, 1897
Sau96I	GGNCC	4 cut(s)	665, 1202, 1986, 1996
ScaI	AGTACT	2 cut(s)	521, 862
SchI	GAGTC	3 cut(s)	19, 735, 1783
ScrFI	CCNGG	3 cut(s)	1001, 1386, 1848
SduI	GDGCHC	2 cut(s)	400, 1755
SfaNI	GCATC	5 cut(s)	231, 1165, 1195, 1329, 1687
SfcI	CTRYAG	4 cut(s)	327, 420, 669, 1782
Sfr274I	CTCGAG	3 cut(s)	70, 393, 1488
SfuI	TTCGAA	1 cut(s)	637
SinI	GGWCC	3 cut(s)	1202, 1986, 1996
SlaI	CTCGAG	3 cut(s)	70, 393, 1488
SmiMI	CAYNNNNRTG	1 cut(s)	744
SmlI	CTYRAG	6 cut(s)	70, 163, 393, 505, 1181, 1488
SmoI	CTYRAG	6 cut(s)	70, 163, 393, 505, 1181, 1488
SphI	GCATGC	1 cut(s)	1297
Sse9I	AATT	9 cut(s)	40, 380, 730, 959, 986, 1137, 1598, 1616, 1878
SsiI	CCGC	5 cut(s)	297, 1030, 1260, 1291, 1883
SspMI	CTAG	2 cut(s)	440, 864
SstI	GAGCTC	1 cut(s)	400
StyD4I	CCNGG	3 cut(s)	999, 1384, 1846
StyI	CCWWGG	4 cut(s)	361, 547, 745, 882
TaaI	ACNGT	5 cut(s)	171, 488, 878, 1367, 1934
TaiI	ACGT	2 cut(s)	1456, 1473
TaqI	TCGA	9 cut(s)	23, 71, 394, 560, 637, 1489, 1772, 1809, 1896
TasI	AATT	9 cut(s)	40, 380, 730, 959, 986, 1137, 1598, 1616, 1878
TatI	WGTACW	4 cut(s)	519, 535, 860, 1945
TauI	GCSGC	1 cut(s)	300
TfiI	GAWTC	9 cut(s)	227, 268, 592, 629, 820, 930, 1067, 1499, 1841
TscAI	CASTG	2 cut(s)	575, 1552
TseFI	GTSAC	3 cut(s)	171, 1042, 1813
TseI	GCWGC	4 cut(s)	106, 833, 1027, 1589
Tsp45I	GTSAC	3 cut(s)	171, 1042, 1813
TspDTI	ATGAA	9 cut(s)	108, 137, 144, 240, 639, 922, 1312, 1835, 1841
TspGWI	ACGGA	2 cut(s)	686, 1758
TspRI	CASTG	2 cut(s)	575, 1552
Van91I	CCANNNNNTGG	1 cut(s)	751
Vha464I	CTTAAG	3 cut(s)	163, 505, 1181
VpaK11BI	GGWCC	3 cut(s)	1202, 1986, 1996
VspI	ATTAAT	1 cut(s)	974
XagI	CCTNNNNNAGG	2 cut(s)	637, 1004
XapI	RAATTY	2 cut(s)	40, 1878
XceI	RCATGY	2 cut(s)	239, 1297
XhoI	CTCGAG	3 cut(s)	70, 393, 1488
XmnI	GAANNNNTTC	2 cut(s)	633, 995
XspI	CTAG	2 cut(s)	440, 864
ZrmI	AGTACT	2 cut(s)	521, 862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.