Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0009237

Physical Location & Seq

Genomic Coordinates Forward (+)

52649682 .. 52651074

Gene Structure 1393 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0426100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGTCGACCTTGTTCTCAACTGCTGCCTCCTTTGCTGCAACACTGATGTTGGGCCGTTCCATGGTGGAGCAAGTCTTCAACAACTCATACCTCCAGGCTCTCTGGGCTTGGTTCCGGTCTGATCTGACTTTTGTTGTCCCGGAGTACACCGAAGTAGGAGAACGTAATCAGATATACGACTCCGTGGAGCCCTACCTCCGAGCAAAAATAGGCACCAATACGAAACGTGTCAGAGTCAGCAAAACCACTAGGCAAAAGACCACCAGCTTTACCCTTGACGACTATCAAGAAGTCACAGACACATTCGAAAACTTCAGTATTAAGTGGCGTTATGTGTGCATTGAACCAAAGGATCATCACTTTGAAGAAAAACGTTACTATGAACTAAATTTCCACAAGAAGCACAGAGCCAAAATGAGCTCCTACTTGGACTATGTCGTTGCTCAAGCTAAAGAGATCAAAAATGCAGAAAAGGTTCTCAGGATTTATTCTCGTTGCACTTCAGGTTCCTACAAATACTGGGAATCAACAATATTAGAGCATCCTTGTACTTTTGAGACACTGGCCATGGATCCAACGGAGAAGAAAATGATCGTGGACGATTTGGATAGGTTTGTGCGGAGGAAAGAGTTCTATAAGAAGGTTGGGAAGGCGTGGAAAAGAGGCTACTTGTTATATGGTCCGCCTGGTACTGGCAAATCCAGCTTGATTGCAGCCATGGCAAATTACCTCAACTACAATATATATGATTTGGAGCTTACAAGCATCTCCAACAATTCTGATTTGAGGCATTCTTTGCTGTCCACCACCAATCGCTCTATTTTGATAATTGAGGACATTGATTGCTCCTTGGATATACAGAACCGGGAAAAAGAGGAGGAATCAGATGAGCAAGTGCTTGTCCTTACTAAGGACAAGAACGAACTAAAGCAACAGACTGTGACACTGTCGGGGCTACTGAACTTCATTGATGGCCTGTGGTCAAGCTGTGGTGATGAGAGAATCATTGTGTTCACCACCAACTACAAGGATAAACTAGACCCTGCATTGTTGCGGCCAGGACGAATGGATGTGCATATACACATCCTGGCTTCTAGGTCCCTTGACATTCATGATCATCCTCTCTTTGCAGAAATTGAAGGGTTGATGCAGACCACAGAGGTCACCCCGGCAGAGGTTGCTGGGCAGCTACAGGTGAGTTATGATGCTGATGTTGCTCTTGCAGCGCTGGTGAAATTCATCAAGGAAAAGAAGGAGGAGGATGAGAAGAAGGAGAAGGAAAAAAAGAGAGAAGAAGCACAAGCAAAGAAACTAAAGAGAAAAAGGTTGCTGGCTCTTTTTCAGAAGATCAAGGAAATTACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAP_fibrillin Pkinase

Protein Analysis

454

Amino Acids

52.76

Weight (kDa)

7.61

Isoelectric Point (pI)

46.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	23 - 113	5.1e-19	Domain associated at C-terminal with AAA
AAA	PF00004	223 - 362	4.8e-19	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	362 - 426	7.4e-17	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53450 AT5G53450 AT5G53450
fragaria_vesca	FvH4_7g31750 FvH4_7g31750 FvH4_7g31750
malus_domestica	MD01G1219800.v1.1
prunus_persica	Prupe.2G311400_v2.0.a1 Prupe.2G311400_v2.0.a1
pyrus_communis	pycom01g22960
rosa_chinensis	RchiOBHm_Chr1g0380971
rosa_laevigata	RLG00000026255
rosa_multiflora	Rmu_sc0013826.1_g000005 Rmu_sc0013826.1_g000006
rosa_roxburghii	Rroxscaffold_4G00278890
rosa_rugosa	Rorug01G0426000 Rorug01G0426100
rosa_samantha	Rh1AG450000 Rh1BG405800 Rh1CG419800 Rh1DG436300
rosa_wichuraiana	Rw1G039200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	212
AccI	GTMKAC	1 cut(s)	5
AciI	CCGC	3 cut(s)	619, 683, 1054
AclI	AACGTT	1 cut(s)	373
AclWI	GGATC	3 cut(s)	360, 566, 579
AcoI	YGGCCR	2 cut(s)	564, 1055
AcsI	RAATTY	2 cut(s)	388, 1235
AcuI	CTGAAG	2 cut(s)	298, 486
AfaI	GTAC	3 cut(s)	146, 550, 691
AfeI	AGCGCT	1 cut(s)	1227
AfiI	CCNNNNNNNGG	4 cut(s)	61, 692, 910, 1174
AflIII	ACRYGT	1 cut(s)	226
AgsI	TTSAA	4 cut(s)	79, 344, 365, 1139
AjnI	CCWGG	4 cut(s)	93, 685, 1057, 1086
AloI	GAACNNNNNNTCC	2 cut(s)	375, 407
AluBI	AGCT	7 cut(s)	267, 420, 449, 705, 757, 987, 1189
AluI	AGCT	7 cut(s)	267, 420, 449, 705, 757, 987, 1189
Alw21I	GWGCWC	1 cut(s)	422
Alw26I	GTCTC	1 cut(s)	551
AlwI	GGATC	3 cut(s)	360, 566, 579
Aor51HI	AGCGCT	1 cut(s)	1227
AoxI	GGCC	4 cut(s)	52, 564, 973, 1055
ApeKI	GCWGC	5 cut(s)	23, 35, 713, 1186, 1223
ApoI	RAATTY	2 cut(s)	388, 1235
Asp700I	GAANNNNTTC	2 cut(s)	474, 629
AspLEI	GCGC	1 cut(s)	1228
AspS9I	GGNCC	3 cut(s)	52, 680, 1098
AsuC2I	CCSGG	3 cut(s)	140, 866, 1169
AsuHPI	GGTGA	5 cut(s)	1004, 1006, 1156, 1207, 1243
AsuII	TTCGAA	1 cut(s)	306
AvaII	GGWCC	2 cut(s)	680, 1098
BalI	TGGCCA	1 cut(s)	566
BamHI	GGATCC	1 cut(s)	571
BanI	GGYRCC	1 cut(s)	212
BanII	GRGCYC	2 cut(s)	192, 422
BbsI	GAAGAC	1 cut(s)	67
Bbv12I	GWGCWC	1 cut(s)	422
BbvI	GCAGC	5 cut(s)	10, 22, 725, 1198, 1235
BccI	CCATC	1 cut(s)	965
BceAI	ACGGC	1 cut(s)	39
BciT130I	CCWGG	4 cut(s)	95, 687, 1059, 1088
BclI	TGATCA	1 cut(s)	1114
BcnI	CCSGG	3 cut(s)	140, 866, 1169
BcoDI	GTCTC	1 cut(s)	551
BfaI	CTAG	3 cut(s)	249, 1037, 1095
BfmI	CTRYAG	1 cut(s)	1190
BfoI	RGCGCY	1 cut(s)	1229
BisI	GCNGC	6 cut(s)	24, 36, 714, 1055, 1187, 1224
BlsI	GCNGC	6 cut(s)	25, 37, 715, 1056, 1188, 1225
Bme1390I	CCNGG	7 cut(s)	95, 140, 687, 866, 1059, 1088, 1169
Bme18I	GGWCC	2 cut(s)	680, 1098
BmgT120I	GGNCC	3 cut(s)	52, 680, 1098
BmiI	GGNNCC	6 cut(s)	113, 189, 214, 508, 573, 1100
BmrFI	CCNGG	7 cut(s)	95, 140, 687, 866, 1059, 1088, 1169
BmrI	ACTGGG	1 cut(s)	529
BmsI	GCATC	4 cut(s)	550, 774, 1137, 1195
BmuI	ACTGGG	1 cut(s)	529
BpiI	GAAGAC	1 cut(s)	67
BpmI	CTGGAG	1 cut(s)	77
Bpu14I	TTCGAA	1 cut(s)	306
BpuEI	CTTGAG	1 cut(s)	429
BpuMI	CCSGG	3 cut(s)	140, 866, 1169
BsaJI	CCNNGG	6 cut(s)	60, 183, 567, 717, 849, 1167
BsaWI	WCCGGW	1 cut(s)	114
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 692, 910, 1174
Bse1I	ACTGG	3 cut(s)	524, 567, 697
BseBI	CCWGG	4 cut(s)	95, 687, 1059, 1088
BseDI	CCNNGG	6 cut(s)	60, 183, 567, 717, 849, 1167
BseGI	GGATG	5 cut(s)	541, 1075, 1083, 1117, 1267
BseLI	CCNNNNNNNGG	4 cut(s)	61, 692, 910, 1174
BseMII	CTCAG	1 cut(s)	493
BseNI	ACTGG	3 cut(s)	524, 567, 697
BseRI	GAGGAG	2 cut(s)	890, 1271
BseXI	GCAGC	5 cut(s)	10, 22, 725, 1198, 1235
BseYI	CCCAGC	1 cut(s)	1181
BshFI	GGCC	4 cut(s)	54, 566, 975, 1057
BshNI	GGYRCC	1 cut(s)	212
BsiHKAI	GWGCWC	1 cut(s)	422
BsiSI	CCGG	4 cut(s)	115, 140, 865, 1169
BslFI	GGGAC	2 cut(s)	122, 1084
BslI	CCNNNNNNNGG	4 cut(s)	61, 692, 910, 1174
BsmAI	GTCTC	1 cut(s)	551
BsmFI	GGGAC	2 cut(s)	122, 1084
BsmI	GAATGC	1 cut(s)	790
BsnI	GGCC	4 cut(s)	54, 566, 975, 1057
Bsp119I	TTCGAA	1 cut(s)	306
Bsp1286I	GDGCHC	2 cut(s)	192, 422
Bsp143I	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
Bsp19I	CCATGG	3 cut(s)	60, 567, 717
BspACI	CCGC	3 cut(s)	619, 683, 1054
BspANI	GGCC	4 cut(s)	54, 566, 975, 1057
BspCNI	CTCAG	1 cut(s)	492
BspHI	TCATGA	1 cut(s)	1111
BspLI	GGNNCC	6 cut(s)	113, 189, 214, 508, 573, 1100
BspPI	GGATC	3 cut(s)	360, 566, 579
BspT104I	TTCGAA	1 cut(s)	306
BspT107I	GGYRCC	1 cut(s)	212
BsrI	ACTGG	3 cut(s)	524, 567, 697
BssECI	CCNNGG	6 cut(s)	60, 183, 567, 717, 849, 1167
BssMI	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
BssT1I	CCWWGG	4 cut(s)	60, 567, 717, 849
Bst2UI	CCWGG	4 cut(s)	95, 687, 1059, 1088
Bst4CI	ACNGT	2 cut(s)	940, 948
BstAPI	GCANNNNNTGC	2 cut(s)	796, 1178
BstBI	TTCGAA	1 cut(s)	306
BstC8I	GCNNGC	1 cut(s)	1332
BstDEI	CTNAG	2 cut(s)	479, 909
BstDSI	CCRYGG	4 cut(s)	60, 183, 567, 717
BstEII	GGTNACC	1 cut(s)	1162
BstENI	CCTNNNNNAGG	1 cut(s)	908
BstF5I	GGATG	5 cut(s)	541, 1075, 1083, 1117, 1267
BstH2I	RGCGCY	1 cut(s)	1229
BstHHI	GCGC	1 cut(s)	1228
BstKTI	GATC	7 cut(s)	124, 355, 459, 574, 594, 1117, 1350
BstMAI	GTCTC	1 cut(s)	551
BstMBI	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
BstMWI	GCNNNNNNNGC	8 cut(s)	32, 104, 702, 719, 796, 1178, 1214, 1223
BstNI	CCWGG	4 cut(s)	95, 687, 1059, 1088
BstPI	GGTNACC	1 cut(s)	1162
BstSCI	CCNGG	7 cut(s)	93, 138, 685, 864, 1057, 1086, 1167
BstSFI	CTRYAG	1 cut(s)	1190
BstV1I	GCAGC	5 cut(s)	10, 22, 725, 1198, 1235
BstV2I	GAAGAC	1 cut(s)	67
BstX2I	RGATCY	1 cut(s)	571
BstYI	RGATCY	1 cut(s)	571
BsuRI	GGCC	4 cut(s)	54, 566, 975, 1057
BtgI	CCRYGG	4 cut(s)	60, 183, 567, 717
BtsCI	GGATG	5 cut(s)	541, 1075, 1083, 1117, 1267
BtsIMutI	CAGTG	3 cut(s)	41, 560, 944
Cac8I	GCNNGC	1 cut(s)	1332
CciI	TCATGA	1 cut(s)	1111
CfoI	GCGC	1 cut(s)	1228
Cfr13I	GGNCC	3 cut(s)	52, 680, 1098
Csp6I	GTAC	3 cut(s)	145, 549, 690
CviAII	CATG	4 cut(s)	61, 568, 718, 1112
CviQI	GTAC	3 cut(s)	145, 549, 690
DdeI	CTNAG	2 cut(s)	479, 909
DpnI	GATC	7 cut(s)	123, 354, 458, 573, 593, 1116, 1349
DpnII	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
EaeI	YGGCCR	2 cut(s)	564, 1055
EciI	GGCGGA	1 cut(s)	672
Ecl136II	GAGCTC	1 cut(s)	420
Eco130I	CCWWGG	4 cut(s)	60, 567, 717, 849
Eco24I	GRGCYC	2 cut(s)	192, 422
Eco47I	GGWCC	2 cut(s)	680, 1098
Eco47III	AGCGCT	1 cut(s)	1227
Eco53kI	GAGCTC	1 cut(s)	420
Eco57I	CTGAAG	2 cut(s)	298, 486
Eco91I	GGTNACC	1 cut(s)	1162
EcoICRI	GAGCTC	1 cut(s)	420
EcoNI	CCTNNNNNAGG	1 cut(s)	908
EcoO109I	RGGNCCY	1 cut(s)	1098
EcoO65I	GGTNACC	1 cut(s)	1162
EcoRII	CCWGG	4 cut(s)	93, 685, 1057, 1086
EcoT14I	CCWWGG	4 cut(s)	60, 567, 717, 849
EcoT38I	GRGCYC	2 cut(s)	192, 422
ErhI	CCWWGG	4 cut(s)	60, 567, 717, 849
FaeI	CATG	4 cut(s)	64, 571, 721, 1115
FaqI	GGGAC	2 cut(s)	122, 1084
FatI	CATG	4 cut(s)	60, 567, 717, 1111
FbaI	TGATCA	1 cut(s)	1114
FblI	GTMKAC	1 cut(s)	5
Fnu4HI	GCNGC	6 cut(s)	24, 36, 714, 1055, 1187, 1224
FokI	GGATG	5 cut(s)	528, 1070, 1082, 1104, 1274
FriOI	GRGCYC	2 cut(s)	192, 422
Fsp4HI	GCNGC	6 cut(s)	24, 36, 714, 1055, 1187, 1224
FspBI	CTAG	3 cut(s)	249, 1037, 1095
GlaI	GCGC	1 cut(s)	1227
GluI	GCNGC	6 cut(s)	24, 36, 714, 1055, 1187, 1224
GsaI	CCCAGC	1 cut(s)	1185
GsuI	CTGGAG	1 cut(s)	77
HaeII	RGCGCY	1 cut(s)	1229
HaeIII	GGCC	4 cut(s)	54, 566, 975, 1057
HapII	CCGG	4 cut(s)	115, 140, 865, 1169
HhaI	GCGC	1 cut(s)	1228
Hin1II	CATG	4 cut(s)	64, 571, 721, 1115
Hin6I	GCGC	1 cut(s)	1226
HinP1I	GCGC	1 cut(s)	1226
HincII	GTYRAC	1 cut(s)	6
HindII	GTYRAC	1 cut(s)	6
HinfI	GANTC	5 cut(s)	179, 234, 524, 881, 1002
HpaII	CCGG	4 cut(s)	115, 140, 865, 1169
HphI	GGTGA	5 cut(s)	1004, 1006, 1156, 1207, 1243
Hpy166II	GTNNAC	5 cut(s)	6, 147, 598, 804, 1014
Hpy188I	TCNGA	8 cut(s)	121, 126, 171, 200, 233, 781, 886, 1344
Hpy188III	TCNNGA	3 cut(s)	287, 481, 1112
Hpy8I	GTNNAC	5 cut(s)	6, 147, 598, 804, 1014
HpyAV	CCTTC	6 cut(s)	634, 643, 1133, 1246, 1264, 1270
HpyCH4III	ACNGT	2 cut(s)	940, 948
HpyCH4IV	ACGT	3 cut(s)	163, 226, 373
HpyF10VI	GCNNNNNNNGC	8 cut(s)	32, 104, 702, 719, 796, 1178, 1214, 1223
HpyF3I	CTNAG	2 cut(s)	479, 909
HpySE526I	ACGT	3 cut(s)	163, 226, 373
Hsp92II	CATG	4 cut(s)	64, 571, 721, 1115
HspAI	GCGC	1 cut(s)	1226
Ksp22I	TGATCA	1 cut(s)	1114
Kzo9I	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
LmnI	GCTCC	5 cut(s)	67, 187, 425, 754, 851
Lsp1109I	GCAGC	5 cut(s)	10, 22, 725, 1198, 1235
LweI	GCATC	4 cut(s)	550, 774, 1137, 1195
MaeI	CTAG	3 cut(s)	249, 1037, 1095
MaeII	ACGT	3 cut(s)	163, 226, 373
MaeIII	GTNAC	4 cut(s)	292, 374, 940, 1162
MalI	GATC	7 cut(s)	123, 354, 458, 573, 593, 1116, 1349
MboI	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
MboII	GAAGA	6 cut(s)	67, 377, 595, 1279, 1304, 1357
MflI	RGATCY	1 cut(s)	571
MhlI	GDGCHC	2 cut(s)	192, 422
MlsI	TGGCCA	1 cut(s)	566
MluCI	AATT	7 cut(s)	388, 724, 775, 828, 1134, 1235, 1356
MluNI	TGGCCA	1 cut(s)	566
MlyI	GAGTC	2 cut(s)	173, 243
MmeI	TCCRAC	2 cut(s)	599, 795
Mox20I	TGGCCA	1 cut(s)	566
MroXI	GAANNNNTTC	2 cut(s)	474, 629
MscI	TGGCCA	1 cut(s)	566
MseI	TTAA	1 cut(s)	321
Msp20I	TGGCCA	1 cut(s)	566
MspI	CCGG	4 cut(s)	115, 140, 865, 1169
MspR9I	CCNGG	7 cut(s)	95, 140, 687, 866, 1059, 1088, 1169
Mva1269I	GAATGC	1 cut(s)	790
MvaI	CCWGG	4 cut(s)	95, 687, 1059, 1088
MwoI	GCNNNNNNNGC	8 cut(s)	32, 104, 702, 719, 796, 1178, 1214, 1223
NciI	CCSGG	3 cut(s)	140, 866, 1169
NcoI	CCATGG	3 cut(s)	60, 567, 717
NdeII	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
NlaIII	CATG	4 cut(s)	64, 571, 721, 1115
NlaIV	GGNNCC	6 cut(s)	113, 189, 214, 508, 573, 1100
NmuCI	GTSAC	3 cut(s)	292, 940, 1162
NspV	TTCGAA	1 cut(s)	306
PagI	TCATGA	1 cut(s)	1111
PctI	GAATGC	1 cut(s)	790
PdmI	GAANNNNTTC	2 cut(s)	474, 629
PfeI	GAWTC	3 cut(s)	524, 881, 1002
PflFI	GACNNNGTC	2 cut(s)	434, 946
PfoI	TCCNGGA	1 cut(s)	138
PkrI	GCNGC	6 cut(s)	25, 37, 715, 1056, 1188, 1225
PleI	GAGTC	2 cut(s)	173, 242
PpsI	GAGTC	2 cut(s)	173, 242
PpuMI	RGGWCCY	1 cut(s)	1098
Psp124BI	GAGCTC	1 cut(s)	422
Psp1406I	AACGTT	1 cut(s)	373
Psp5II	RGGWCCY	1 cut(s)	1098
Psp6I	CCWGG	4 cut(s)	93, 685, 1057, 1086
PspEI	GGTNACC	1 cut(s)	1162
PspFI	CCCAGC	1 cut(s)	1181
PspGI	CCWGG	4 cut(s)	93, 685, 1057, 1086
PspN4I	GGNNCC	6 cut(s)	113, 189, 214, 508, 573, 1100
PspPI	GGNCC	3 cut(s)	52, 680, 1098
PspPPI	RGGWCCY	1 cut(s)	1098
PsuI	RGATCY	1 cut(s)	571
PsyI	GACNNNGTC	2 cut(s)	434, 946
RsaI	GTAC	3 cut(s)	146, 550, 691
RsaNI	GTAC	3 cut(s)	145, 549, 690
SacI	GAGCTC	1 cut(s)	422
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	1 cut(s)	321
SatI	GCNGC	6 cut(s)	24, 36, 714, 1055, 1187, 1224
Sau3AI	GATC	7 cut(s)	121, 352, 456, 571, 591, 1114, 1347
Sau96I	GGNCC	3 cut(s)	52, 680, 1098
SchI	GAGTC	2 cut(s)	173, 243
ScrFI	CCNGG	7 cut(s)	95, 140, 687, 866, 1059, 1088, 1169
SduI	GDGCHC	2 cut(s)	192, 422
SfaNI	GCATC	4 cut(s)	550, 774, 1137, 1195
SfcI	CTRYAG	1 cut(s)	1190
SfuI	TTCGAA	1 cut(s)	306
SinI	GGWCC	2 cut(s)	680, 1098
SmlI	CTYRAG	1 cut(s)	444
SmoI	CTYRAG	1 cut(s)	444
Sse9I	AATT	7 cut(s)	388, 724, 775, 828, 1134, 1235, 1356
SsiI	CCGC	3 cut(s)	619, 683, 1054
SspI	AATATT	1 cut(s)	534
SspMI	CTAG	3 cut(s)	249, 1037, 1095
SstI	GAGCTC	1 cut(s)	422
StyD4I	CCNGG	7 cut(s)	93, 138, 685, 864, 1057, 1086, 1167
StyI	CCWWGG	4 cut(s)	60, 567, 717, 849
TaaI	ACNGT	2 cut(s)	940, 948
TaiI	ACGT	3 cut(s)	166, 229, 376
TaqI	TCGA	2 cut(s)	5, 306
TasI	AATT	7 cut(s)	388, 724, 775, 828, 1134, 1235, 1356
TatI	WGTACW	2 cut(s)	144, 548
TauI	GCSGC	1 cut(s)	1057
TfiI	GAWTC	3 cut(s)	524, 881, 1002
Tru1I	TTAA	1 cut(s)	321
Tru9I	TTAA	1 cut(s)	321
TscAI	CASTG	3 cut(s)	48, 567, 951
TseFI	GTSAC	3 cut(s)	292, 940, 1162
TseI	GCWGC	5 cut(s)	23, 35, 713, 1186, 1223
Tsp45I	GTSAC	3 cut(s)	292, 940, 1162
TspDTI	ATGAA	4 cut(s)	396, 955, 1100, 1228
TspGWI	ACGGA	2 cut(s)	172, 593
TspRI	CASTG	3 cut(s)	48, 567, 951
Tth111I	GACNNNGTC	2 cut(s)	434, 946
VpaK11BI	GGWCC	2 cut(s)	680, 1098
XagI	CCTNNNNNAGG	1 cut(s)	908
XapI	RAATTY	2 cut(s)	388, 1235
XmiI	GTMKAC	1 cut(s)	5
XmnI	GAANNNNTTC	2 cut(s)	474, 629
XspI	CTAG	3 cut(s)	249, 1037, 1095

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.