Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0009237

Physical Location & Seq

Genomic Coordinates Reverse (-)

20397581 .. 20400818

Gene Structure 3238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g22960.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCGCTATGTGGGGTTGGCTTGAGTCCAAGTTTTGAAAGTTTTGAAGTAGTTTGTGTTGGTGGAAACTTGTCGACAAGACTGATCAGACCGAGCCTTATGCGGACCATTGGAAAGACATCGGATTGGAAGAGGAGACTGTGTTTGGGAGTCCGTTGTTCATCACTGAAAATGGAGGAGAATGCTCCGAGTGACTTGTCTGTTCCTGTGGAAGAAGAATCAGGGCATGTCATAAGGTTCAAGATCTCCGATTTCAAGATTCTTGACCATGTTAGTGTTGGCCTTGGTGGTCGGGCAGGCGAAGTGGTTTTTGAAGCTATAGTAAAGGATACTGATAGCCCTTTGTATAATACACAAGTTGTACTTCGACGTCTTACTAGTGTTCGAGCTCAGCGTAGGGGTAGACGAGCAATAGAGGTGTTAAAGAAGTTAGCTCGTCGTAGACTCATGTACCATTCTTATTCAATGCAAGTGCATGGTTACATCTCTTCAGCTACAAGTAGTGGTCGTTCCTCATTCACTCTGGTCCATGGGTATCATGGTAGTTTTTCCTTAAGACATTGGCTACAACAATCGGATTGGCTCCCAACCTTGGAGGCTACTCTTGCATTGGACAAGGAATCTGTTAGAAAAGTGGGAGATGACACAGTTGGAGGATCTGCAGTTTCTCGGCAACTACGAATGACTAGAATATTGATGAGAGATCTCTTAATTGGAGTGAACTACTTGCACAGCCATGGACTTGCCCACACGGAATTGAGGCTGGAGAATGTGCACATAAGTCCAGTGGATAGACACATTAAAGTAGGAATATTAGGTAGTGCTGCTGACTTTTATGAGGATCGTCCGGATGGAACTATGGATAATAACTTGGATAGGCGACAAATGATGATTGCATTTGACATGAGATGTCTTGGATTCATGATGGCAAAAATGGTGATGCAGGAACTTATGGATCCTGTTATATTTACAAAGTTCAAATCATTTCTCACAAAGGGAAATGACCCTTCATGCTTGCGTGAATTTTTATTGCAAATACTCCATAGAAATTCCTCATCTGGAAACGCTGGACTGCAAATACTCGATAGGAATTGGGGTGCAGGGTGGAACCTTTTATCCTTGTTGCTAGCAACAAAACCTTCTAAAAGATCCCATCCATCGATATCATCAGATGGGGACTTGGCTCAACTGCAATGCGAATCTCAGAAGAATACATTTACGGCCAGCCTCAGGCTATCTCACTTCATTGAGTTAATGGAGATGCTAAATCCTCATTCAAGGCCAAAGAATTGGCTGGAATTGCTGCCAGGAAAGTGGCGTCTGTTGTACTGTACTGGAAGGCACATTGGTTTAACCTTTCGGCAACCTCCTGAACAAGTCCTCATTGGCCATGTACACCTAACCGTATCAAGAGTATCAAAGTTGAACACCAACCTGTCGTTTATCTCTGACATTGGCTTCACAGTCATGACCGGCGAGAACTGGCCCCATGACAAGACTGGTGTAGAGGGGAAACTGCAAGTAAACTCTTTATTTAGATTAATGGCCGGGAGACGGTTATATCTCAAGGAAGAAGAAAAGAACACAGGACAACTCTCTTTCAGCCCTTCTAATGCTCGCGACGCCTTTGCTCAGAAATTATCAGGTGGAAAGTGGAGGAAAGCACTCCCATTTAAGGAGTCTCCATCAAGCCTGCCCGTGGCCAAACTCTTTTCAAGCGGCGTCGATGGAGTAACACTGAATCTCGGTGATCCATTGAGTAAAAATCTCAATAGTGCAGGAAATGTTGTTCAAGAAATTCGAATACAAGTCCCGCCTGAAATGTTCGATTTGTCGAAGCTCGTGTGCGGAACATACGTAGACTCCAGACTGCTCGTCCTTCGTGGGGTAAATGGTTCTGCACTCTTATTTACACGGTCTGGTTTCGATGAAAGTTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAP_fibrillin Pkinase

Protein Analysis

647

Amino Acids

72.2

Weight (kDa)

9.55

Isoelectric Point (pI)

49.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53450 AT5G53450 AT5G53450
fragaria_vesca	FvH4_7g31750 FvH4_7g31750 FvH4_7g31750
malus_domestica	MD01G1219800.v1.1
prunus_persica	Prupe.2G311400_v2.0.a1 Prupe.2G311400_v2.0.a1
pyrus_communis	pycom01g22960
rosa_chinensis	RchiOBHm_Chr1g0380971
rosa_laevigata	RLG00000026255
rosa_multiflora	Rmu_sc0013826.1_g000005 Rmu_sc0013826.1_g000006
rosa_roxburghii	Rroxscaffold_4G00278890
rosa_rugosa	Rorug01G0426000 Rorug01G0426100
rosa_samantha	Rh1AG450000 Rh1BG405800 Rh1CG419800 Rh1DG436300
rosa_wichuraiana	Rw1G039200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	373
AccI	GTMKAC	4 cut(s)	74, 403, 442, 1860
AccII	CGCG	1 cut(s)	1620
AccIII	TCCGGA	1 cut(s)	847
AciI	CCGC	4 cut(s)	103, 1719, 1814, 1848
AclWI	GGATC	6 cut(s)	664, 849, 950, 963, 1143, 1745
AcoI	YGGCCR	4 cut(s)	1221, 1387, 1545, 1701
AcsI	RAATTY	3 cut(s)	1022, 1048, 1797
AcuI	CTGAAG	1 cut(s)	474
AcyI	GRCGYC	4 cut(s)	370, 1318, 1623, 1722
AfaI	GTAC	5 cut(s)	363, 452, 1328, 1333, 1395
AfiI	CCNNNNNNNGG	6 cut(s)	592, 1230, 1554, 1675, 1699, 1885
AflII	CTTAAG	1 cut(s)	553
AhdI	GACNNNNNGTC	1 cut(s)	1874
AhlI	ACTAGT	1 cut(s)	377
AjnI	CCWGG	1 cut(s)	1306
AloI	GAACNNNNNNTCC	4 cut(s)	1100, 1132, 1773, 1805
AluBI	AGCT	5 cut(s)	317, 389, 434, 494, 1840
AluI	AGCT	5 cut(s)	317, 389, 434, 494, 1840
Alw21I	GWGCWC	2 cut(s)	391, 777
Alw26I	GTCTC	3 cut(s)	130, 1546, 1686
Alw44I	GTGCAC	1 cut(s)	773
AlwI	GGATC	6 cut(s)	664, 849, 950, 963, 1143, 1745
Aor13HI	TCCGGA	1 cut(s)	847
AoxI	GGCC	7 cut(s)	280, 1221, 1280, 1387, 1484, 1545, 1701
ApaLI	GTGCAC	1 cut(s)	773
ApeKI	GCWGC	2 cut(s)	824, 1303
ApoI	RAATTY	3 cut(s)	1022, 1048, 1797
AseI	ATTAAT	1 cut(s)	1541
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	105, 526, 1485
AsuC2I	CCSGG	1 cut(s)	1549
AsuHPI	GGTGA	2 cut(s)	949, 1760
AsuII	TTCGAA	1 cut(s)	1801
AsuNHI	GCTAGC	1 cut(s)	1126
AvaII	GGWCC	2 cut(s)	105, 526
AxyI	CCTNAGG	1 cut(s)	1229
BaeGI	GKGCMC	1 cut(s)	777
BaeI	ACNNNNGTAYC	2 cut(s)	434, 467
BalI	TGGCCA	2 cut(s)	1389, 1703
BamHI	GGATCC	1 cut(s)	955
BanII	GRGCYC	1 cut(s)	391
BauI	CACGAG	1 cut(s)	1841
Bbv12I	GWGCWC	2 cut(s)	391, 777
BbvI	GCAGC	2 cut(s)	811, 1290
BccI	CCATC	7 cut(s)	845, 919, 1161, 1165, 1166, 1693, 1721
BceAI	ACGGC	1 cut(s)	1236
BcgI	CGANNNNNNTGC	4 cut(s)	82, 116, 1610, 1644
BciT130I	CCWGG	1 cut(s)	1308
BciVI	GTATCC	1 cut(s)	322
BclI	TGATCA	1 cut(s)	84
BcnI	CCSGG	1 cut(s)	1549
BcoDI	GTCTC	3 cut(s)	130, 1546, 1686
BcuI	ACTAGT	1 cut(s)	377
BfaI	CTAG	3 cut(s)	378, 687, 1127
BfmI	CTRYAG	2 cut(s)	318, 660
BfoI	RGCGCY	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	553
BfuI	GTATCC	1 cut(s)	322
BglII	AGATCT	2 cut(s)	243, 703
BisI	GCNGC	3 cut(s)	825, 1304, 1720
BlpI	GCTNAGC	1 cut(s)	390
BlsI	GCNGC	3 cut(s)	826, 1305, 1721
Bme1390I	CCNGG	2 cut(s)	1308, 1549
Bme18I	GGWCC	2 cut(s)	105, 526
BmeRI	GACNNNNNGTC	1 cut(s)	1874
BmgT120I	GGNCC	3 cut(s)	105, 526, 1485
BmiI	GGNNCC	4 cut(s)	584, 957, 1109, 1487
BmrFI	CCNGG	2 cut(s)	1308, 1549
BmsI	GCATC	2 cut(s)	930, 1251
BmtI	GCTAGC	1 cut(s)	1130
BpmI	CTGGAG	2 cut(s)	785, 1849
Bpu1102I	GCTNAGC	1 cut(s)	390
Bpu14I	TTCGAA	1 cut(s)	1801
BpuEI	CTTGAG	2 cut(s)	43, 1550
BpuMI	CCSGG	1 cut(s)	1549
Bsa29I	ATCGAT	1 cut(s)	1160
BsaAI	YACGTR	1 cut(s)	1858
BsaHI	GRCGYC	4 cut(s)	370, 1318, 1623, 1722
BsaJI	CCNNGG	5 cut(s)	283, 529, 591, 736, 1698
BsaWI	WCCGGW	1 cut(s)	847
BsaXI	ACNNNNNCTCC	4 cut(s)	127, 157, 1847, 1877
Bsc4I	CCNNNNNNNGG	6 cut(s)	592, 1230, 1554, 1675, 1699, 1885
Bse118I	RCCGGY	1 cut(s)	1472
Bse1I	ACTGG	4 cut(s)	785, 1339, 1487, 1504
Bse21I	CCTNAGG	1 cut(s)	1229
Bse3DI	GCAATG	1 cut(s)	1199
BseAI	TCCGGA	1 cut(s)	847
BseBI	CCWGG	1 cut(s)	1308
BseCI	ATCGAT	1 cut(s)	1160
BseDI	CCNNGG	5 cut(s)	283, 529, 591, 736, 1698
BseGI	GGATG	2 cut(s)	856, 1153
BseLI	CCNNNNNNNGG	6 cut(s)	592, 1230, 1554, 1675, 1699, 1885
BseMI	GCAATG	1 cut(s)	1199
BseMII	CTCAG	4 cut(s)	404, 1217, 1243, 1646
BseNI	ACTGG	4 cut(s)	785, 1339, 1487, 1504
BseRI	GAGGAG	2 cut(s)	148, 191
BseSI	GKGCMC	1 cut(s)	777
BseXI	GCAGC	2 cut(s)	811, 1290
BsgI	GTGCAG	3 cut(s)	1119, 1797, 1884
Bsh1236I	CGCG	1 cut(s)	1620
BshFI	GGCC	7 cut(s)	282, 1223, 1282, 1389, 1486, 1547, 1703
BshVI	ATCGAT	1 cut(s)	1160
BsiHKAI	GWGCWC	2 cut(s)	391, 777
BsiSI	CCGG	3 cut(s)	848, 1473, 1548
BslFI	GGGAC	2 cut(s)	1190, 1796
BslI	CCNNNNNNNGG	6 cut(s)	592, 1230, 1554, 1675, 1699, 1885
BsmAI	GTCTC	3 cut(s)	130, 1546, 1686
BsmBI	CGTCTC	1 cut(s)	1546
BsmFI	GGGAC	2 cut(s)	1190, 1796
BsmI	GAATGC	1 cut(s)	187
BsnI	GGCC	7 cut(s)	282, 1223, 1282, 1389, 1486, 1547, 1703
Bsp119I	TTCGAA	1 cut(s)	1801
Bsp1286I	GDGCHC	2 cut(s)	391, 777
Bsp13I	TCCGGA	1 cut(s)	847
Bsp1407I	TGTACA	1 cut(s)	1393
Bsp143I	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
Bsp1720I	GCTNAGC	1 cut(s)	390
Bsp19I	CCATGG	2 cut(s)	529, 736
Bsp68I	TCGCGA	1 cut(s)	1620
BspACI	CCGC	4 cut(s)	103, 1719, 1814, 1848
BspANI	GGCC	7 cut(s)	282, 1223, 1282, 1389, 1486, 1547, 1703
BspCNI	CTCAG	4 cut(s)	403, 1216, 1242, 1645
BspDI	ATCGAT	1 cut(s)	1160
BspEI	TCCGGA	1 cut(s)	847
BspFNI	CGCG	1 cut(s)	1620
BspHI	TCATGA	2 cut(s)	921, 1467
BspLI	GGNNCC	4 cut(s)	584, 957, 1109, 1487
BspMAI	CTGCAG	1 cut(s)	664
BspOI	GCTAGC	1 cut(s)	1130
BspPI	GGATC	6 cut(s)	664, 849, 950, 963, 1143, 1745
BspT104I	TTCGAA	1 cut(s)	1801
BspTI	CTTAAG	1 cut(s)	553
BsrDI	GCAATG	1 cut(s)	1199
BsrFI	RCCGGY	1 cut(s)	1472
BsrGI	TGTACA	1 cut(s)	1393
BsrI	ACTGG	4 cut(s)	785, 1339, 1487, 1504
BssAI	RCCGGY	1 cut(s)	1472
BssECI	CCNNGG	5 cut(s)	283, 529, 591, 736, 1698
BssMI	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
BssNI	GRCGYC	4 cut(s)	370, 1318, 1623, 1722
BssSI	CACGAG	1 cut(s)	1841
BssT1I	CCWWGG	4 cut(s)	283, 529, 591, 736
Bst2BI	CACGAG	1 cut(s)	1841
Bst2UI	CCWGG	1 cut(s)	1308
Bst4CI	ACNGT	7 cut(s)	141, 649, 1331, 1405, 1465, 1557, 1917
Bst6I	CTCTTC	2 cut(s)	125, 493
BstACI	GRCGYC	4 cut(s)	370, 1318, 1623, 1722
BstAFI	CTTAAG	1 cut(s)	553
BstAUI	TGTACA	1 cut(s)	1393
BstBAI	YACGTR	1 cut(s)	1858
BstBI	TTCGAA	1 cut(s)	1801
BstC8I	GCNNGC	6 cut(s)	298, 1016, 1128, 1225, 1618, 1694
BstDEI	CTNAG	4 cut(s)	390, 1203, 1229, 1632
BstDSI	CCRYGG	3 cut(s)	529, 736, 1698
BstF5I	GGATG	2 cut(s)	856, 1153
BstFNI	CGCG	1 cut(s)	1620
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	8 cut(s)	87, 246, 659, 706, 844, 958, 1151, 1753
BstMAI	GTCTC	3 cut(s)	130, 1546, 1686
BstMBI	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
BstMWI	GCNNNNNNNGC	3 cut(s)	605, 1300, 1622
BstNI	CCWGG	1 cut(s)	1308
BstNSI	RCATGY	1 cut(s)	230
BstSCI	CCNGG	2 cut(s)	1306, 1547
BstSFI	CTRYAG	2 cut(s)	318, 660
BstSLI	GKGCMC	1 cut(s)	777
BstSNI	TACGTA	1 cut(s)	1858
BstUI	CGCG	1 cut(s)	1620
BstV1I	GCAGC	2 cut(s)	811, 1290
BstX2I	RGATCY	5 cut(s)	243, 656, 703, 955, 1148
BstXI	CCANNNNNNTGG	2 cut(s)	1290, 1314
BstYI	RGATCY	5 cut(s)	243, 656, 703, 955, 1148
Bsu15I	ATCGAT	1 cut(s)	1160
Bsu36I	CCTNAGG	1 cut(s)	1229
BsuI	GTATCC	1 cut(s)	322
BsuRI	GGCC	7 cut(s)	282, 1223, 1282, 1389, 1486, 1547, 1703
BsuTUI	ATCGAT	1 cut(s)	1160
BtgI	CCRYGG	3 cut(s)	529, 736, 1698
BtsCI	GGATG	2 cut(s)	856, 1153
BtsIMutI	CAGTG	3 cut(s)	164, 792, 1736
BtuMI	TCGCGA	1 cut(s)	1620
Cac8I	GCNNGC	6 cut(s)	298, 1016, 1128, 1225, 1618, 1694
CciI	TCATGA	2 cut(s)	921, 1467
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	1 cut(s)	1472
Cfr13I	GGNCC	3 cut(s)	105, 526, 1485
ClaI	ATCGAT	1 cut(s)	1160
CseI	GACGC	3 cut(s)	1307, 1631, 1711
Csp6I	GTAC	5 cut(s)	362, 451, 1327, 1332, 1394
CviQI	GTAC	5 cut(s)	362, 451, 1327, 1332, 1394
DdeI	CTNAG	4 cut(s)	390, 1203, 1229, 1632
DpnI	GATC	8 cut(s)	86, 245, 658, 705, 843, 957, 1150, 1752
DpnII	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
DriI	GACNNNNNGTC	1 cut(s)	1874
EaeI	YGGCCR	4 cut(s)	1221, 1387, 1545, 1701
Eam1104I	CTCTTC	2 cut(s)	125, 493
Eam1105I	GACNNNNNGTC	1 cut(s)	1874
EarI	CTCTTC	2 cut(s)	125, 493
Ecl136II	GAGCTC	1 cut(s)	389
Eco105I	TACGTA	1 cut(s)	1858
Eco130I	CCWWGG	4 cut(s)	283, 529, 591, 736
Eco24I	GRGCYC	1 cut(s)	391
Eco32I	GATATC	1 cut(s)	1164
Eco47I	GGWCC	2 cut(s)	105, 526
Eco53kI	GAGCTC	1 cut(s)	389
Eco57I	CTGAAG	1 cut(s)	474
Eco81I	CCTNAGG	1 cut(s)	1229
EcoICRI	GAGCTC	1 cut(s)	389
EcoRII	CCWGG	1 cut(s)	1306
EcoRV	GATATC	1 cut(s)	1164
EcoT14I	CCWWGG	4 cut(s)	283, 529, 591, 736
EcoT38I	GRGCYC	1 cut(s)	391
ErhI	CCWWGG	4 cut(s)	283, 529, 591, 736
Esp3I	CGTCTC	1 cut(s)	1546
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	2 cut(s)	1190, 1796
FauI	CCCGC	1 cut(s)	1821
FbaI	TGATCA	1 cut(s)	84
FblI	GTMKAC	4 cut(s)	74, 403, 442, 1860
Fnu4HI	GCNGC	3 cut(s)	825, 1304, 1720
FokI	GGATG	2 cut(s)	863, 1140
FriOI	GRGCYC	1 cut(s)	391
Fsp4HI	GCNGC	3 cut(s)	825, 1304, 1720
FspBI	CTAG	3 cut(s)	378, 687, 1127
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	3 cut(s)	825, 1304, 1720
GsuI	CTGGAG	2 cut(s)	785, 1849
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	7 cut(s)	282, 1223, 1282, 1389, 1486, 1547, 1703
HapII	CCGG	3 cut(s)	848, 1473, 1548
HgaI	GACGC	3 cut(s)	1307, 1631, 1711
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	4 cut(s)	370, 1318, 1623, 1722
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	1 cut(s)	75
HindII	GTYRAC	1 cut(s)	75
HpaII	CCGG	3 cut(s)	848, 1473, 1548
HphI	GGTGA	2 cut(s)	949, 1760
Hpy166II	GTNNAC	8 cut(s)	75, 404, 443, 721, 775, 1396, 1525, 1861
Hpy188I	TCNGA	9 cut(s)	89, 124, 189, 250, 577, 1171, 1206, 1450, 1635
Hpy8I	GTNNAC	8 cut(s)	75, 404, 443, 721, 775, 1396, 1525, 1861
Hpy99I	CGWCG	4 cut(s)	372, 441, 1625, 1727
HpyAV	CCTTC	5 cut(s)	1017, 1149, 1332, 1617, 1889
HpyCH4III	ACNGT	7 cut(s)	141, 649, 1331, 1405, 1465, 1557, 1917
HpyCH4IV	ACGT	2 cut(s)	370, 1857
HpyF10VI	GCNNNNNNNGC	3 cut(s)	605, 1300, 1622
HpyF3I	CTNAG	4 cut(s)	390, 1203, 1229, 1632
HpySE526I	ACGT	2 cut(s)	370, 1857
Hsp92I	GRCGYC	4 cut(s)	370, 1318, 1623, 1722
HspAI	GCGC	1 cut(s)	5
Kpn2I	TCCGGA	1 cut(s)	847
Ksp22I	TGATCA	1 cut(s)	84
Kzo9I	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
LmnI	GCTCC	2 cut(s)	190, 588
Lsp1109I	GCAGC	2 cut(s)	811, 1290
LweI	GCATC	2 cut(s)	930, 1251
MaeI	CTAG	3 cut(s)	378, 687, 1127
MaeII	ACGT	2 cut(s)	370, 1857
MaeIII	GTNAC	3 cut(s)	191, 479, 1732
MalI	GATC	8 cut(s)	86, 245, 658, 705, 843, 957, 1150, 1752
MboI	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
MboII	GAAGA	7 cut(s)	142, 224, 227, 480, 1219, 1583, 1586
MflI	RGATCY	5 cut(s)	243, 656, 703, 955, 1148
MhlI	GDGCHC	2 cut(s)	391, 777
MlsI	TGGCCA	2 cut(s)	1389, 1703
MluCI	AATT	9 cut(s)	711, 755, 1022, 1048, 1090, 1288, 1298, 1637, 1797
MluNI	TGGCCA	2 cut(s)	1389, 1703
MlyI	GAGTC	5 cut(s)	34, 159, 438, 1688, 1856
MmeI	TCCRAC	1 cut(s)	631
Mox20I	TGGCCA	2 cut(s)	1389, 1703
MroI	TCCGGA	1 cut(s)	847
MscI	TGGCCA	2 cut(s)	1389, 1703
MseI	TTAA	9 cut(s)	422, 554, 710, 801, 1253, 1352, 1541, 1674, 1939
MslI	CAYNNNNRTG	3 cut(s)	273, 735, 1466
Msp20I	TGGCCA	2 cut(s)	1389, 1703
MspCI	CTTAAG	1 cut(s)	553
MspI	CCGG	3 cut(s)	848, 1473, 1548
MspR9I	CCNGG	2 cut(s)	1308, 1549
Mva1269I	GAATGC	1 cut(s)	187
MvaI	CCWGG	1 cut(s)	1308
MvnI	CGCG	1 cut(s)	1620
MwoI	GCNNNNNNNGC	3 cut(s)	605, 1300, 1622
NciI	CCSGG	1 cut(s)	1549
NcoI	CCATGG	2 cut(s)	529, 736
NdeII	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
NheI	GCTAGC	1 cut(s)	1126
NlaIV	GGNNCC	4 cut(s)	584, 957, 1109, 1487
NmeAIII	GCCGAG	1 cut(s)	649
NmuCI	GTSAC	1 cut(s)	191
NruI	TCGCGA	1 cut(s)	1620
NspI	RCATGY	1 cut(s)	230
NspV	TTCGAA	1 cut(s)	1801
PagI	TCATGA	2 cut(s)	921, 1467
PcsI	WCGNNNNNNNCGW	2 cut(s)	391, 676
PctI	GAATGC	1 cut(s)	187
PfeI	GAWTC	6 cut(s)	218, 259, 620, 918, 1199, 1741
PkrI	GCNGC	3 cut(s)	826, 1305, 1721
PleI	GAGTC	5 cut(s)	33, 158, 438, 1687, 1856
PpsI	GAGTC	5 cut(s)	33, 158, 438, 1687, 1856
Ppu21I	YACGTR	1 cut(s)	1858
PshBI	ATTAAT	1 cut(s)	1541
Psp124BI	GAGCTC	1 cut(s)	391
Psp6I	CCWGG	1 cut(s)	1306
PspGI	CCWGG	1 cut(s)	1306
PspN4I	GGNNCC	4 cut(s)	584, 957, 1109, 1487
PspPI	GGNCC	3 cut(s)	105, 526, 1485
PsrI	GAACNNNNNNTAC	2 cut(s)	493, 525
PstI	CTGCAG	1 cut(s)	664
PsuI	RGATCY	5 cut(s)	243, 656, 703, 955, 1148
RruI	TCGCGA	1 cut(s)	1620
RsaI	GTAC	5 cut(s)	363, 452, 1328, 1333, 1395
RsaNI	GTAC	5 cut(s)	362, 451, 1327, 1332, 1394
RseI	CAYNNNNRTG	3 cut(s)	273, 735, 1466
SacI	GAGCTC	1 cut(s)	391
SalI	GTCGAC	1 cut(s)	73
SaqAI	TTAA	9 cut(s)	422, 554, 710, 801, 1253, 1352, 1541, 1674, 1939
SatI	GCNGC	3 cut(s)	825, 1304, 1720
Sau3AI	GATC	8 cut(s)	84, 243, 656, 703, 841, 955, 1148, 1750
Sau96I	GGNCC	3 cut(s)	105, 526, 1485
SchI	GAGTC	5 cut(s)	34, 159, 438, 1688, 1856
ScrFI	CCNGG	2 cut(s)	1308, 1549
SduI	GDGCHC	2 cut(s)	391, 777
SfaNI	GCATC	2 cut(s)	930, 1251
SfcI	CTRYAG	2 cut(s)	318, 660
SfuI	TTCGAA	1 cut(s)	1801
SinI	GGWCC	2 cut(s)	105, 526
SmiMI	CAYNNNNRTG	3 cut(s)	273, 735, 1466
SmlI	CTYRAG	3 cut(s)	22, 553, 1565
SmoI	CTYRAG	3 cut(s)	22, 553, 1565
SnaBI	TACGTA	1 cut(s)	1858
SpeI	ACTAGT	1 cut(s)	377
Sse9I	AATT	9 cut(s)	711, 755, 1022, 1048, 1090, 1288, 1298, 1637, 1797
SsiI	CCGC	4 cut(s)	103, 1719, 1814, 1848
SspI	AATATT	2 cut(s)	693, 813
SspMI	CTAG	3 cut(s)	378, 687, 1127
SstI	GAGCTC	1 cut(s)	391
StyD4I	CCNGG	2 cut(s)	1306, 1547
StyI	CCWWGG	4 cut(s)	283, 529, 591, 736
TaaI	ACNGT	7 cut(s)	141, 649, 1331, 1405, 1465, 1557, 1917
TaiI	ACGT	2 cut(s)	373, 1860
TaqII	GACCGA	1 cut(s)	106
TasI	AATT	9 cut(s)	711, 755, 1022, 1048, 1090, 1288, 1298, 1637, 1797
TatI	WGTACW	4 cut(s)	361, 1326, 1331, 1393
TauI	GCSGC	1 cut(s)	1722
TfiI	GAWTC	6 cut(s)	218, 259, 620, 918, 1199, 1741
Tru1I	TTAA	9 cut(s)	422, 554, 710, 801, 1253, 1352, 1541, 1674, 1939
Tru9I	TTAA	9 cut(s)	422, 554, 710, 801, 1253, 1352, 1541, 1674, 1939
TscAI	CASTG	3 cut(s)	171, 792, 1743
TseFI	GTSAC	1 cut(s)	191
TseI	GCWGC	2 cut(s)	824, 1303
Tsp45I	GTSAC	1 cut(s)	191
TspDTI	ATGAA	4 cut(s)	150, 910, 999, 1234
TspGWI	ACGGA	2 cut(s)	143, 767
TspRI	CASTG	3 cut(s)	171, 792, 1743
Vha464I	CTTAAG	1 cut(s)	553
VneI	GTGCAC	1 cut(s)	773
VpaK11BI	GGWCC	2 cut(s)	105, 526
VspI	ATTAAT	1 cut(s)	1541
XapI	RAATTY	3 cut(s)	1022, 1048, 1797
XceI	RCATGY	1 cut(s)	230
XcmI	CCANNNNNNNNNTGG	3 cut(s)	275, 536, 1496
XmiI	GTMKAC	4 cut(s)	74, 403, 442, 1860
XspI	CTAG	3 cut(s)	378, 687, 1127
ZraI	GACGTC	1 cut(s)	371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.