Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0009237

Physical Location & Seq

Genomic Coordinates Reverse (-)

1679604 .. 1685562

Gene Structure 5959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026255

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2364 bp

ATGACTTGGAAGAGTCGCAACGAGGCAGACTCGGCCGGTGAATCAGGCGACGCAGTTCGCGGTGCGGATGGGGGCGACGAAGGAATTGGTGATGGAGGAGAAGGAGGCGGCGATTTTTTGGAATTTGAGAAGCCAGAGCAGGAGACCTGGCAGGCGCTCAGGGAGCGGTCTTTGTCGACAGTCCGATCGGCACCGGGGCTGCTGATCTCGACGCCGTCTTCCCTGCCTCGACTTTTCAAACTGAGCATTTCCCACACACCAATATCTGAAGTATTCGCCGGAAAGTTTGCTCCTTTTTCATTCTCTGTTCGCCGGCCGATAAAACCCAGGTGGTGTTTAGAGCCACTATCAATGGCAGTATGTGGGATTGGTTTGAGTCCGAGTTTTGAGAGTTTTGAAGCTGTTTGCGTTGGGGGGAATTTTTCGACAAGGCTGATCAGACCGAGTGTGATGCGTGCGGTTGGGAAGTTATCTGATTGGAAGAGGAGACCGGGTTTGGGAGTACGGTGTTCATCATCATTGAAATTTGAGGAGAATGTTGGGAGAGACTTGGCAGTGCCTGTGGAGGAAGAATCTGGTCATGTCATGAAGTTCAAGATGTCTGATTTCAAAGTTCTCGACCGTGTTAGTGTTGGCCTTGGTGGAAGGGCAGGTGAAGTAGTTTATGAAGCTATAGTGAGTGATGCTAATAGTCCTTTGTATAGCACACAAGTCGTTCTTCGACGTCTCACTAGTGTTCGAGCTCAGCGAAGGGGTAGACGTGCAATAGAGGTGTTAAAGAAGTTAGTTCGCCGTAGGCTTTTGTACCATTCTTACTCAATGCAAGTTCATGGTTATATTTCTTCAGCTACAAGTAGTGGTCGCGGCTCATTCACTCTGGTCCACGGGTATCATGGTAGTTTTTCTTTAAGACATTGGCTTCAACAATCAGATTGGCTTCCAACCTTGGAGGCAACTCTTGCATTGGACAAGGAATCTGTTAGAAGGGTGGGAGATGACACAGTTGGGGGACCTGCAGTTTCTCGGCAATTGCGGATGATTAGATTATTAATGAGAGATCTCTTAATTGGAGTTAATTACTTGCACAGCCATGGACTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCACATAAGCCCAGTGGATAGACACATAAAAGTAGGAATATTAGGAAATACTGCAGACTTTTATGAGGATAGTCCAAATGGTGGCACAATGGATGCTAACGTGGATAGGCGACAAATGATGATTGCATTTGATATGAGATGTCTTGGATTCATGATGGCAAAAATGGTGTTGCAGGAACTAATGGACCCCTCAATATTCTCAAAGTTCAAGTCATTTCTCACAAAGGGAAATGATCCTTCATGCTTGCGTGAATTTCTAATGCAAATACTTCAGAGGAATTCCTCATCTGGCAATGCTGGGCTCCAAATTCTTGATAGGAATTGGGGTGCAGGGTGGCACCTTTTATCCTTGTTGCTAGCAACAAAACCTTCTAAAAGAGTAAGTTGCTTAGATGCTCTTACACACCCATTTCTATGTGGACCTCGATGGCGGGTAGTCCCATCCATTGATATCATCAGATGGGGTCTGGGTTCAACAGCATTGCGAATCTCAGAAGAGTACATCTATGGCCAGCCTCAGCGTAGCAGACTTTCCCACTTCATTGAGCTAATGGAGATGCTGAATCCTCATTCAAGGCCCAAGAACTGGCTGGAATTGCTGCCAGGAAAGTGGCGCTTATTGTACTCTACTGGGAGGCACATTGGCTTGACCTTTAGGCAACCTCTTGAACGAGTCCTTATTGGTAATGTGCACCTAACAGTGTCAAGAGTATCGAAGTTGAACACCAGCCTGTCGTTTACATCCGACATTGGATTCAGAGTCATGATTGGTCAGAATTGGCCCCATGACAAGACCGGTGTAGATGGGAAACTGCAAGTGAACTCTATATTTAAATTAAAGGCTGGGAGGCGGTTATATCTGAAGGAAGAAGAAAACACCACAGGAACGCTATCAATGGGTCCATCAAACACTCATGATGCTTTTCCTCAGAAATTATCAGGTAGAAAATGGAGGAAAGCACCATTTAAGGAGTTTCCATCAAGCCTTCCCGTGGCAAAGCTTGTTTCAAGTGAGATTGATGACATAACAATGAGTCTTGGTCATCCTTTAAGCTCAAATGCTGATAGTGCAAGAAATGTACTTCAAGAAGTTCGGACACAGGTCCCAACTGAGATGTTCGATTTGTCGAAGCTTGTGTGTGGAACATATGTGGACTCCAGGCTGTTAGTCATTCGCGGGGTAAATGGTTCTGCCCTCTTATTTACAAGATCTTGTTTCGATGAAATATGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007346 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051726 GO:0060255 GO:0065007 GO:0071704 GO:0097472 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAP_fibrillin Pkinase

Protein Analysis

788

Amino Acids

87.81

Weight (kDa)

9.6

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	346 - 514	8.5e-06	Protein kinase domain
PAP_fibrillin	PF04755	549 - 776	1.4e-07	PAP_fibrillin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009237)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53450 AT5G53450 AT5G53450
fragaria_vesca	FvH4_7g31750 FvH4_7g31750 FvH4_7g31750
malus_domestica	MD01G1219800.v1.1
prunus_persica	Prupe.2G311400_v2.0.a1 Prupe.2G311400_v2.0.a1
pyrus_communis	pycom01g22960
rosa_chinensis	RchiOBHm_Chr1g0380971
rosa_laevigata	RLG00000026255
rosa_multiflora	Rmu_sc0013826.1_g000005 Rmu_sc0013826.1_g000006
rosa_roxburghii	Rroxscaffold_4G00278890
rosa_rugosa	Rorug01G0426000 Rorug01G0426100
rosa_samantha	Rh1AG450000 Rh1BG405800 Rh1CG419800 Rh1DG436300
rosa_wichuraiana	Rw1G039200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	641
AatII	GACGTC	1 cut(s)	727
Acc36I	ACCTGC	2 cut(s)	641, 1021
AccB1I	GGYRCC	2 cut(s)	190, 1464
AccB7I	CCANNNNNTGG	2 cut(s)	1208, 1713
AccBSI	CCGCTC	1 cut(s)	166
AccI	GTMKAC	2 cut(s)	176, 757
AccII	CGCG	3 cut(s)	60, 864, 2304
AclWI	GGATC	1 cut(s)	1355
AcoI	YGGCCR	3 cut(s)	33, 314, 1636
AcsI	RAATTY	6 cut(s)	122, 418, 524, 1379, 1405, 1434
AcuI	CTGAAG	4 cut(s)	288, 828, 1382, 2009
AcyI	GRCGYC	2 cut(s)	212, 724
AfaI	GTAC	5 cut(s)	504, 806, 1628, 1751, 2208
AfiI	CCNNNNNNNGG	4 cut(s)	497, 1208, 1713, 2119
AgeI	ACCGGT	1 cut(s)	1922
AhlI	ACTAGT	1 cut(s)	731
AjiI	CACGTC	1 cut(s)	761
AjnI	CCWGG	4 cut(s)	146, 326, 1729, 2285
AluBI	AGCT	8 cut(s)	401, 671, 743, 848, 1675, 2128, 2181, 2260
AluI	AGCT	8 cut(s)	401, 671, 743, 848, 1675, 2128, 2181, 2260
Alw21I	GWGCWC	3 cut(s)	745, 1131, 1821
Alw26I	GTCTC	4 cut(s)	137, 481, 540, 731
Alw44I	GTGCAC	2 cut(s)	1127, 1817
AlwI	GGATC	1 cut(s)	1355
AlwNI	CAGNNNCTG	1 cut(s)	560
AoxI	GGCC	6 cut(s)	33, 314, 634, 1636, 1703, 1907
ApaLI	GTGCAC	2 cut(s)	1127, 1817
ApeKI	GCWGC	2 cut(s)	199, 1726
ApoI	RAATTY	6 cut(s)	122, 418, 524, 1379, 1405, 1434
ArsI	GACNNNNNNTTYG	2 cut(s)	1322, 1354
AseI	ATTAAT	1 cut(s)	1049
AsiGI	ACCGGT	1 cut(s)	1922
AspLEI	GCGC	2 cut(s)	157, 1743
AspS9I	GGNCC	8 cut(s)	880, 1010, 1312, 1547, 1704, 1908, 2027, 2230
AsuC2I	CCSGG	2 cut(s)	195, 492
AsuHPI	GGTGA	3 cut(s)	50, 101, 665
AsuNHI	GCTAGC	1 cut(s)	1483
AvaII	GGWCC	6 cut(s)	880, 1010, 1312, 1547, 2027, 2230
BaeGI	GKGCMC	2 cut(s)	1131, 1821
BalI	TGGCCA	1 cut(s)	1638
BanI	GGYRCC	2 cut(s)	190, 1464
BanII	GRGCYC	2 cut(s)	745, 1431
BbsI	GAAGAC	1 cut(s)	210
Bbv12I	GWGCWC	3 cut(s)	745, 1131, 1821
BbvCI	CCTCAGC	1 cut(s)	1644
BbvI	GCAGC	2 cut(s)	186, 1713
BccI	CCATC	9 cut(s)	62, 86, 1276, 1548, 1576, 1581, 1925, 2038, 2113
BceAI	ACGGC	2 cut(s)	199, 777
BcgI	CGANNNNNNTGC	4 cut(s)	433, 467, 694, 728
BciT130I	CCWGG	4 cut(s)	148, 328, 1731, 2287
BclI	TGATCA	1 cut(s)	435
BcnI	CCSGG	2 cut(s)	195, 492
BcoDI	GTCTC	4 cut(s)	137, 481, 540, 731
BcuI	ACTAGT	1 cut(s)	731
BfaI	CTAG	2 cut(s)	732, 1484
BfmI	CTRYAG	3 cut(s)	672, 1014, 1179
BfoI	RGCGCY	2 cut(s)	158, 1744
BfuAI	ACCTGC	2 cut(s)	641, 1021
BglII	AGATCT	2 cut(s)	1057, 2336
BisI	GCNGC	4 cut(s)	109, 200, 865, 1727
BlpI	GCTNAGC	1 cut(s)	744
BlsI	GCNGC	4 cut(s)	110, 201, 866, 1728
Bme1390I	CCNGG	6 cut(s)	148, 195, 328, 492, 1731, 2287
Bme18I	GGWCC	6 cut(s)	880, 1010, 1312, 1547, 2027, 2230
BmgBI	CACGTC	1 cut(s)	761
BmgT120I	GGNCC	8 cut(s)	880, 1010, 1312, 1547, 1704, 1908, 2027, 2230
BmiI	GGNNCC	8 cut(s)	192, 1011, 1314, 1430, 1466, 1910, 2028, 2232
BmrFI	CCNGG	6 cut(s)	148, 195, 328, 492, 1731, 2287
BmrI	ACTGGG	2 cut(s)	1133, 1767
BmsI	GCATC	6 cut(s)	441, 673, 1210, 1510, 1674, 2035
BmtI	GCTAGC	1 cut(s)	1487
BmuI	ACTGGG	2 cut(s)	1133, 1767
BoxI	GACNNNNGTC	1 cut(s)	2228
BpiI	GAAGAC	1 cut(s)	210
BplI	GAGNNNNNCTC	2 cut(s)	14, 46
BpmI	CTGGAG	1 cut(s)	2269
Bpu10I	CCTNAGC	2 cut(s)	158, 1644
Bpu1102I	GCTNAGC	1 cut(s)	744
BpuMI	CCSGG	2 cut(s)	195, 492
BsaHI	GRCGYC	2 cut(s)	212, 724
BsaI	GGTCTC	2 cut(s)	137, 481
BsaJI	CCNNGG	7 cut(s)	194, 326, 637, 883, 945, 1090, 2118
BsaWI	WCCGGW	1 cut(s)	1922
BsaXI	ACNNNNNCTCC	2 cut(s)	478, 508
Bsc4I	CCNNNNNNNGG	4 cut(s)	497, 1208, 1713, 2119
Bse118I	RCCGGY	3 cut(s)	35, 312, 1922
Bse1I	ACTGG	3 cut(s)	1139, 1718, 1762
Bse3DI	GCAATG	2 cut(s)	1426, 1607
BseBI	CCWGG	4 cut(s)	148, 328, 1731, 2287
BseDI	CCNNGG	7 cut(s)	194, 326, 637, 883, 945, 1090, 2118
BseGI	GGATG	6 cut(s)	73, 1041, 1225, 1568, 1868, 2170
BseLI	CCNNNNNNNGG	4 cut(s)	497, 1208, 1713, 2119
BseMI	GCAATG	2 cut(s)	1426, 1607
BseMII	CTCAG	7 cut(s)	172, 233, 758, 1632, 1658, 2069, 2229
BseNI	ACTGG	3 cut(s)	1139, 1718, 1762
BseRI	GAGGAG	3 cut(s)	111, 499, 545
BseSI	GKGCMC	2 cut(s)	1131, 1821
BseX3I	CGGCCG	2 cut(s)	33, 314
BseXI	GCAGC	2 cut(s)	186, 1713
BseYI	CCCAGC	2 cut(s)	1424, 1970
BsgI	GTGCAG	1 cut(s)	1476
Bsh1236I	CGCG	3 cut(s)	60, 864, 2304
Bsh1285I	CGRYCG	4 cut(s)	36, 188, 317, 622
BshFI	GGCC	6 cut(s)	35, 316, 636, 1638, 1705, 1909
BshNI	GGYRCC	2 cut(s)	190, 1464
BshTI	ACCGGT	1 cut(s)	1922
BsiEI	CGRYCG	4 cut(s)	36, 188, 317, 622
BsiHKAI	GWGCWC	3 cut(s)	745, 1131, 1821
BsiSI	CCGG	6 cut(s)	36, 194, 279, 313, 491, 1923
BslFI	GGGAC	3 cut(s)	1023, 1550, 2216
BslI	CCNNNNNNNGG	4 cut(s)	497, 1208, 1713, 2119
BsmAI	GTCTC	4 cut(s)	137, 481, 540, 731
BsmBI	CGTCTC	1 cut(s)	731
BsmFI	GGGAC	3 cut(s)	1023, 1550, 2216
BsnI	GGCC	6 cut(s)	35, 316, 636, 1638, 1705, 1909
Bso31I	GGTCTC	2 cut(s)	137, 481
Bsp1286I	GDGCHC	4 cut(s)	745, 1131, 1431, 1821
Bsp143I	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
Bsp1720I	GCTNAGC	1 cut(s)	744
Bsp19I	CCATGG	1 cut(s)	1090
BspANI	GGCC	6 cut(s)	35, 316, 636, 1638, 1705, 1909
BspCNI	CTCAG	7 cut(s)	171, 234, 757, 1631, 1657, 2068, 2230
BspFNI	CGCG	3 cut(s)	60, 864, 2304
BspHI	TCATGA	4 cut(s)	585, 1278, 1890, 2041
BspLI	GGNNCC	8 cut(s)	192, 1011, 1314, 1430, 1466, 1910, 2028, 2232
BspMAI	CTGCAG	2 cut(s)	1018, 1183
BspMI	ACCTGC	2 cut(s)	641, 1021
BspOI	GCTAGC	1 cut(s)	1487
BspPI	GGATC	1 cut(s)	1355
BspT107I	GGYRCC	2 cut(s)	190, 1464
BspTNI	GGTCTC	2 cut(s)	137, 481
BsrBI	CCGCTC	1 cut(s)	166
BsrDI	GCAATG	2 cut(s)	1426, 1607
BsrFI	RCCGGY	3 cut(s)	35, 312, 1922
BsrI	ACTGG	3 cut(s)	1139, 1718, 1762
BssAI	RCCGGY	3 cut(s)	35, 312, 1922
BssECI	CCNNGG	7 cut(s)	194, 326, 637, 883, 945, 1090, 2118
BssMI	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
BssNI	GRCGYC	2 cut(s)	212, 724
BssT1I	CCWWGG	3 cut(s)	637, 945, 1090
Bst2UI	CCWGG	4 cut(s)	148, 328, 1731, 2287
Bst4CI	ACNGT	5 cut(s)	181, 507, 623, 1003, 1828
Bst6I	CTCTTC	3 cut(s)	5, 476, 1617
BstACI	GRCGYC	2 cut(s)	212, 724
BstAPI	GCANNNNNTGC	1 cut(s)	959
BstC8I	GCNNGC	6 cut(s)	153, 314, 456, 1373, 1485, 1640
BstDEI	CTNAG	8 cut(s)	158, 242, 744, 1516, 1618, 1644, 2055, 2238
BstDSI	CCRYGG	3 cut(s)	883, 1090, 2118
BstF5I	GGATG	6 cut(s)	73, 1041, 1225, 1568, 1868, 2170
BstFNI	CGCG	3 cut(s)	60, 864, 2304
BstH2I	RGCGCY	2 cut(s)	158, 1744
BstHHI	GCGC	2 cut(s)	157, 1743
BstKTI	GATC	6 cut(s)	188, 207, 438, 1060, 1363, 2339
BstMAI	GTCTC	4 cut(s)	137, 481, 540, 731
BstMBI	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
BstMCI	CGRYCG	4 cut(s)	36, 188, 317, 622
BstMWI	GCNNNNNNNGC	5 cut(s)	32, 163, 959, 1723, 2195
BstNI	CCWGG	4 cut(s)	148, 328, 1731, 2287
BstPAI	GACNNNNGTC	1 cut(s)	2228
BstSCI	CCNGG	6 cut(s)	146, 193, 326, 490, 1729, 2285
BstSFI	CTRYAG	3 cut(s)	672, 1014, 1179
BstSLI	GKGCMC	2 cut(s)	1131, 1821
BstUI	CGCG	3 cut(s)	60, 864, 2304
BstV1I	GCAGC	2 cut(s)	186, 1713
BstV2I	GAAGAC	1 cut(s)	210
BstX2I	RGATCY	2 cut(s)	1057, 2336
BstXI	CCANNNNNNTGG	1 cut(s)	1737
BstYI	RGATCY	2 cut(s)	1057, 2336
BstZI	CGGCCG	2 cut(s)	33, 314
BsuRI	GGCC	6 cut(s)	35, 316, 636, 1638, 1705, 1909
BtgI	CCRYGG	3 cut(s)	883, 1090, 2118
BtrI	CACGTC	1 cut(s)	761
BtsCI	GGATG	6 cut(s)	73, 1041, 1225, 1568, 1868, 2170
BtsI	GCAGTG	1 cut(s)	561
BtsIMutI	CAGTG	3 cut(s)	561, 1146, 1833
BveI	ACCTGC	2 cut(s)	641, 1021
Cac8I	GCNNGC	6 cut(s)	153, 314, 456, 1373, 1485, 1640
CaiI	CAGNNNCTG	1 cut(s)	560
CciI	TCATGA	4 cut(s)	585, 1278, 1890, 2041
CfoI	GCGC	2 cut(s)	157, 1743
Cfr10I	RCCGGY	3 cut(s)	35, 312, 1922
Cfr13I	GGNCC	8 cut(s)	880, 1010, 1312, 1547, 1704, 1908, 2027, 2230
CseI	GACGC	2 cut(s)	59, 220
Csp6I	GTAC	5 cut(s)	503, 805, 1627, 1750, 2207
CspAI	ACCGGT	1 cut(s)	1922
CviQI	GTAC	5 cut(s)	503, 805, 1627, 1750, 2207
DdeI	CTNAG	8 cut(s)	158, 242, 744, 1516, 1618, 1644, 2055, 2238
DpnI	GATC	6 cut(s)	187, 206, 437, 1059, 1362, 2338
DpnII	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
DraI	TTTAAA	1 cut(s)	1960
EaeI	YGGCCR	3 cut(s)	33, 314, 1636
EagI	CGGCCG	2 cut(s)	33, 314
Eam1104I	CTCTTC	3 cut(s)	5, 476, 1617
EarI	CTCTTC	3 cut(s)	5, 476, 1617
Ecl136II	GAGCTC	1 cut(s)	743
EclXI	CGGCCG	2 cut(s)	33, 314
Eco130I	CCWWGG	3 cut(s)	637, 945, 1090
Eco24I	GRGCYC	2 cut(s)	745, 1431
Eco31I	GGTCTC	2 cut(s)	137, 481
Eco32I	GATATC	1 cut(s)	1579
Eco47I	GGWCC	6 cut(s)	880, 1010, 1312, 1547, 2027, 2230
Eco52I	CGGCCG	2 cut(s)	33, 314
Eco53kI	GAGCTC	1 cut(s)	743
Eco57I	CTGAAG	4 cut(s)	288, 828, 1382, 2009
EcoICRI	GAGCTC	1 cut(s)	743
EcoO109I	RGGNCCY	2 cut(s)	1010, 2230
EcoRI	GAATTC	1 cut(s)	1405
EcoRII	CCWGG	4 cut(s)	146, 326, 1729, 2285
EcoRV	GATATC	1 cut(s)	1579
EcoT14I	CCWWGG	3 cut(s)	637, 945, 1090
EcoT38I	GRGCYC	2 cut(s)	745, 1431
ErhI	CCWWGG	3 cut(s)	637, 945, 1090
Esp3I	CGTCTC	1 cut(s)	731
FalI	AAGNNNNNCTT	4 cut(s)	702, 734, 1727, 1759
FaqI	GGGAC	3 cut(s)	1023, 1550, 2216
FauI	CCCGC	2 cut(s)	1551, 2297
FauNDI	CATATG	1 cut(s)	2275
FbaI	TGATCA	1 cut(s)	435
FblI	GTMKAC	2 cut(s)	176, 757
Fnu4HI	GCNGC	4 cut(s)	109, 200, 865, 1727
FokI	GGATG	6 cut(s)	80, 1048, 1232, 1555, 1855, 2157
FriOI	GRGCYC	2 cut(s)	745, 1431
Fsp4HI	GCNGC	4 cut(s)	109, 200, 865, 1727
FspBI	CTAG	2 cut(s)	732, 1484
GlaI	GCGC	2 cut(s)	156, 1742
GluI	GCNGC	4 cut(s)	109, 200, 865, 1727
GsaI	CCCAGC	2 cut(s)	1428, 1974
GsuI	CTGGAG	1 cut(s)	2269
HaeII	RGCGCY	2 cut(s)	158, 1744
HaeIII	GGCC	6 cut(s)	35, 316, 636, 1638, 1705, 1909
HapII	CCGG	6 cut(s)	36, 194, 279, 313, 491, 1923
HgaI	GACGC	2 cut(s)	59, 220
HhaI	GCGC	2 cut(s)	157, 1743
Hin1I	GRCGYC	2 cut(s)	212, 724
Hin6I	GCGC	2 cut(s)	155, 1741
HinP1I	GCGC	2 cut(s)	155, 1741
HincII	GTYRAC	1 cut(s)	177
HindII	GTYRAC	1 cut(s)	177
HindIII	AAGCTT	2 cut(s)	2126, 2258
HpaII	CCGG	6 cut(s)	36, 194, 279, 313, 491, 1923
HphI	GGTGA	3 cut(s)	50, 101, 665
Hpy166II	GTNNAC	9 cut(s)	177, 758, 883, 1129, 1547, 1819, 1866, 1948, 2281
Hpy8I	GTNNAC	9 cut(s)	177, 758, 883, 1129, 1547, 1819, 1866, 1948, 2281
Hpy99I	CGWCG	4 cut(s)	53, 80, 214, 726
HpyAV	CCTTC	9 cut(s)	74, 95, 639, 744, 978, 1374, 1506, 1984, 2123
HpyCH4III	ACNGT	5 cut(s)	181, 507, 623, 1003, 1828
HpyCH4IV	ACGT	3 cut(s)	724, 760, 1227
HpyF10VI	GCNNNNNNNGC	5 cut(s)	32, 163, 959, 1723, 2195
HpyF3I	CTNAG	8 cut(s)	158, 242, 744, 1516, 1618, 1644, 2055, 2238
HpySE526I	ACGT	3 cut(s)	724, 760, 1227
Hsp92I	GRCGYC	2 cut(s)	212, 724
HspAI	GCGC	2 cut(s)	155, 1741
KroI	GCCGGC	1 cut(s)	312
KroNI	GCCGGC	1 cut(s)	314
Ksp22I	TGATCA	1 cut(s)	435
Kzo9I	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
LmnI	GCTCC	3 cut(s)	163, 295, 1434
Lsp1109I	GCAGC	2 cut(s)	186, 1713
LweI	GCATC	6 cut(s)	441, 673, 1210, 1510, 1674, 2035
MaeI	CTAG	2 cut(s)	732, 1484
MaeII	ACGT	3 cut(s)	724, 760, 1227
MalI	GATC	6 cut(s)	187, 206, 437, 1059, 1362, 2338
MbiI	CCGCTC	1 cut(s)	166
MboI	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
MboII	GAAGA	9 cut(s)	22, 210, 493, 581, 710, 834, 1634, 2006, 2009
MfeI	CAATTG	1 cut(s)	1028
MflI	RGATCY	2 cut(s)	1057, 2336
MhlI	GDGCHC	4 cut(s)	745, 1131, 1431, 1821
MlsI	TGGCCA	1 cut(s)	1638
MluNI	TGGCCA	1 cut(s)	1638
MlyI	GAGTC	7 cut(s)	22, 23, 385, 1809, 1896, 2170, 2276
MmeI	TCCRAC	2 cut(s)	965, 1896
Mox20I	TGGCCA	1 cut(s)	1638
MroNI	GCCGGC	1 cut(s)	312
MscI	TGGCCA	1 cut(s)	1638
MseI	TTAA	9 cut(s)	776, 908, 1049, 1064, 1074, 1959, 1964, 2094, 2177
MslI	CAYNNNNRTG	3 cut(s)	1089, 1540, 2156
Msp20I	TGGCCA	1 cut(s)	1638
MspI	CCGG	6 cut(s)	36, 194, 279, 313, 491, 1923
MspR9I	CCNGG	6 cut(s)	148, 195, 328, 492, 1731, 2287
MunI	CAATTG	1 cut(s)	1028
MvaI	CCWGG	4 cut(s)	148, 328, 1731, 2287
MvnI	CGCG	3 cut(s)	60, 864, 2304
MwoI	GCNNNNNNNGC	5 cut(s)	32, 163, 959, 1723, 2195
NaeI	GCCGGC	1 cut(s)	314
NciI	CCSGG	2 cut(s)	195, 492
NcoI	CCATGG	1 cut(s)	1090
NdeI	CATATG	1 cut(s)	2275
NdeII	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
NgoMIV	GCCGGC	1 cut(s)	312
NheI	GCTAGC	1 cut(s)	1483
NlaIV	GGNNCC	8 cut(s)	192, 1011, 1314, 1430, 1466, 1910, 2028, 2232
NmeAIII	GCCGAG	2 cut(s)	11, 1003
PagI	TCATGA	4 cut(s)	585, 1278, 1890, 2041
PaqCI	CACCTGC	1 cut(s)	641
PcsI	WCGNNNNNNNCGW	1 cut(s)	745
PdiI	GCCGGC	1 cut(s)	314
PfeI	GAWTC	7 cut(s)	41, 572, 974, 1275, 1614, 1690, 1881
PflFI	GACNNNGTC	1 cut(s)	214
PflMI	CCANNNNNTGG	2 cut(s)	1208, 1713
PinAI	ACCGGT	1 cut(s)	1922
PkrI	GCNGC	4 cut(s)	110, 201, 866, 1728
Ple19I	CGATCG	1 cut(s)	188
PleI	GAGTC	7 cut(s)	21, 23, 384, 1808, 1895, 2169, 2276
PpsI	GAGTC	7 cut(s)	21, 23, 384, 1808, 1895, 2169, 2276
PpuMI	RGGWCCY	2 cut(s)	1010, 2230
PshAI	GACNNNNGTC	1 cut(s)	2228
PshBI	ATTAAT	1 cut(s)	1049
Psp124BI	GAGCTC	1 cut(s)	745
Psp5II	RGGWCCY	2 cut(s)	1010, 2230
Psp6I	CCWGG	4 cut(s)	146, 326, 1729, 2285
PspFI	CCCAGC	2 cut(s)	1424, 1970
PspGI	CCWGG	4 cut(s)	146, 326, 1729, 2285
PspN4I	GGNNCC	8 cut(s)	192, 1011, 1314, 1430, 1466, 1910, 2028, 2232
PspPI	GGNCC	8 cut(s)	880, 1010, 1312, 1547, 1704, 1908, 2027, 2230
PspPPI	RGGWCCY	2 cut(s)	1010, 2230
PstI	CTGCAG	2 cut(s)	1018, 1183
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	2 cut(s)	1057, 2336
PsyI	GACNNNGTC	1 cut(s)	214
PvuI	CGATCG	1 cut(s)	188
RsaI	GTAC	5 cut(s)	504, 806, 1628, 1751, 2208
RsaNI	GTAC	5 cut(s)	503, 805, 1627, 1750, 2207
RseI	CAYNNNNRTG	3 cut(s)	1089, 1540, 2156
SacI	GAGCTC	1 cut(s)	745
SalI	GTCGAC	1 cut(s)	175
SaqAI	TTAA	9 cut(s)	776, 908, 1049, 1064, 1074, 1959, 1964, 2094, 2177
SatI	GCNGC	4 cut(s)	109, 200, 865, 1727
Sau3AI	GATC	6 cut(s)	185, 204, 435, 1057, 1360, 2336
Sau96I	GGNCC	8 cut(s)	880, 1010, 1312, 1547, 1704, 1908, 2027, 2230
SchI	GAGTC	7 cut(s)	22, 23, 385, 1809, 1896, 2170, 2276
ScrFI	CCNGG	6 cut(s)	148, 195, 328, 492, 1731, 2287
SduI	GDGCHC	4 cut(s)	745, 1131, 1431, 1821
SfaNI	GCATC	6 cut(s)	441, 673, 1210, 1510, 1674, 2035
SfcI	CTRYAG	3 cut(s)	672, 1014, 1179
SinI	GGWCC	6 cut(s)	880, 1010, 1312, 1547, 2027, 2230
SmiI	ATTTAAAT	1 cut(s)	1960
SmiMI	CAYNNNNRTG	3 cut(s)	1089, 1540, 2156
SpeI	ACTAGT	1 cut(s)	731
SspI	AATATT	2 cut(s)	1167, 1323
SspMI	CTAG	2 cut(s)	732, 1484
SstI	GAGCTC	1 cut(s)	745
StyD4I	CCNGG	6 cut(s)	146, 193, 326, 490, 1729, 2285
StyI	CCWWGG	3 cut(s)	637, 945, 1090
SwaI	ATTTAAAT	1 cut(s)	1960
TaaI	ACNGT	5 cut(s)	181, 507, 623, 1003, 1828
TaiI	ACGT	3 cut(s)	727, 763, 1230
TaqII	GACCGA	1 cut(s)	457
TatI	WGTACW	3 cut(s)	1626, 1749, 2206
TauI	GCSGC	2 cut(s)	111, 867
TfiI	GAWTC	7 cut(s)	41, 572, 974, 1275, 1614, 1690, 1881
Tru1I	TTAA	9 cut(s)	776, 908, 1049, 1064, 1074, 1959, 1964, 2094, 2177
Tru9I	TTAA	9 cut(s)	776, 908, 1049, 1064, 1074, 1959, 1964, 2094, 2177
TscAI	CASTG	3 cut(s)	561, 1146, 1833
TseI	GCWGC	2 cut(s)	199, 1726
TspDTI	ATGAA	9 cut(s)	288, 501, 602, 681, 818, 1267, 1356, 1657, 2364
TspRI	CASTG	3 cut(s)	561, 1146, 1833
Tth111I	GACNNNGTC	1 cut(s)	214
Van91I	CCANNNNNTGG	2 cut(s)	1208, 1713
VneI	GTGCAC	2 cut(s)	1127, 1817
VpaK11BI	GGWCC	6 cut(s)	880, 1010, 1312, 1547, 2027, 2230
VspI	ATTAAT	1 cut(s)	1049
XapI	RAATTY	6 cut(s)	122, 418, 524, 1379, 1405, 1434
XcmI	CCANNNNNNNNNTGG	2 cut(s)	890, 1714
XmiI	GTMKAC	2 cut(s)	176, 757
XspI	CTAG	2 cut(s)	732, 1484
ZraI	GACGTC	1 cut(s)	725

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.