BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08010 AT5G61040 |
| fragaria_vesca | FvH4_5g13830 FvH4_5g13830 FvH4_5g13830 |
| malus_domestica | MD14G1212000.v1.1 |
| prunus_persica | Prupe.5G205200_v2.0.a1 Prupe.5G205200_v2.0.a1 |
| pyrus_communis | pycom06g17960 pycom14g17560 |
| rosa_chinensis | RchiOBHm_Chr7g0183101 |
| rosa_laevigata | RLG00000005078 |
| rosa_multiflora | Rmu_ssc0000111.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00270760 |
| rosa_rugosa | Rorug06G0453000 Rorug06G0453000 Rorug06G0453100.1 |
| rosa_samantha | Rh7AG056100 Rh7BG055400 Rh7CG056900 Rh7DG055600 |
| rosa_wichuraiana | Rw7G004570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 1149 |
| AciI | CCGC | 5 cut(s) | 385, 932, 1162, 1376, 1512 |
| AclI | AACGTT | 1 cut(s) | 84 |
| AclWI | GGATC | 1 cut(s) | 734 |
| AcsI | RAATTY | 3 cut(s) | 361, 961, 1025 |
| AcuI | CTGAAG | 3 cut(s) | 123, 489, 815 |
| AdeI | CACNNNGTG | 1 cut(s) | 1037 |
| AfaI | GTAC | 1 cut(s) | 538 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 307, 637, 1124, 1240, 1570 |
| AflIII | ACRYGT | 1 cut(s) | 849 |
| AjiI | CACGTC | 1 cut(s) | 1187 |
| AjnI | CCWGG | 2 cut(s) | 127, 1389 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 165, 197, 576, 608 |
| Alw21I | GWGCWC | 2 cut(s) | 1212, 1359 |
| Alw26I | GTCTC | 5 cut(s) | 441, 971, 1144, 1208, 1713 |
| AlwI | GGATC | 1 cut(s) | 734 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 26, 1600 |
| Ama87I | CYCGRG | 3 cut(s) | 293, 540, 1211 |
| AoxI | GGCC | 1 cut(s) | 515 |
| ApeKI | GCWGC | 7 cut(s) | 20, 29, 426, 560, 884, 1249, 1600 |
| ApoI | RAATTY | 3 cut(s) | 361, 961, 1025 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1691, 1723 |
| AseI | ATTAAT | 1 cut(s) | 398 |
| AsuC2I | CCSGG | 2 cut(s) | 302, 633 |
| AsuHPI | GGTGA | 9 cut(s) | 359, 486, 710, 1049, 1134, 1482, 1496, 1511, 1545 |
| AvaI | CYCGRG | 3 cut(s) | 293, 540, 1211 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 528, 561 |
| BanII | GRGCYC | 1 cut(s) | 1212 |
| BbsI | GAAGAC | 2 cut(s) | 636, 1629 |
| Bbv12I | GWGCWC | 2 cut(s) | 1212, 1359 |
| BbvI | GCAGC | 7 cut(s) | 16, 32, 413, 547, 896, 1261, 1587 |
| BccI | CCATC | 8 cut(s) | 200, 301, 412, 499, 527, 997, 1475, 1572 |
| BciT130I | CCWGG | 2 cut(s) | 129, 1391 |
| BcnI | CCSGG | 2 cut(s) | 302, 633 |
| BcoDI | GTCTC | 5 cut(s) | 441, 971, 1144, 1208, 1713 |
| BfaI | CTAG | 5 cut(s) | 480, 695, 947, 1253, 1604 |
| BfmI | CTRYAG | 2 cut(s) | 561, 1350 |
| BisI | GCNGC | 7 cut(s) | 21, 30, 427, 561, 885, 1250, 1601 |
| BlpI | GCTNAGC | 3 cut(s) | 48, 140, 578 |
| BlsI | GCNGC | 7 cut(s) | 22, 31, 428, 562, 886, 1251, 1602 |
| Bme1390I | CCNGG | 4 cut(s) | 129, 302, 633, 1391 |
| BmeT110I | CYCGRG | 3 cut(s) | 293, 540, 1211 |
| BmgBI | CACGTC | 1 cut(s) | 1187 |
| BmiI | GGNNCC | 2 cut(s) | 1008, 1562 |
| BmrFI | CCNGG | 4 cut(s) | 129, 302, 633, 1391 |
| BmrI | ACTGGG | 3 cut(s) | 323, 1337, 1416 |
| BmsI | GCATC | 9 cut(s) | 211, 233, 279, 691, 747, 1371, 1411, 1491, 1725 |
| BmuI | ACTGGG | 3 cut(s) | 323, 1337, 1416 |
| BpiI | GAAGAC | 2 cut(s) | 636, 1629 |
| Bpu10I | CCTNAGC | 1 cut(s) | 244 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 48, 140, 578 |
| BpuEI | CTTGAG | 2 cut(s) | 857, 1211 |
| BpuMI | CCSGG | 2 cut(s) | 302, 633 |
| BsaBI | GATNNNNATC | 1 cut(s) | 737 |
| BsaI | GGTCTC | 1 cut(s) | 1713 |
| BsaJI | CCNNGG | 3 cut(s) | 631, 1389, 1556 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 307, 637, 1124, 1240, 1570 |
| Bse1I | ACTGG | 4 cut(s) | 318, 330, 1343, 1411 |
| Bse8I | GATNNNNATC | 1 cut(s) | 737 |
| BseBI | CCWGG | 2 cut(s) | 129, 1391 |
| BseDI | CCNNGG | 3 cut(s) | 631, 1389, 1556 |
| BseGI | GGATG | 3 cut(s) | 10, 193, 1579 |
| BseJI | GATNNNNATC | 1 cut(s) | 737 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 307, 637, 1124, 1240, 1570 |
| BseMII | CTCAG | 7 cut(s) | 258, 569, 610, 879, 1034, 1074, 1110 |
| BseNI | ACTGG | 4 cut(s) | 318, 330, 1343, 1411 |
| BseRI | GAGGAG | 1 cut(s) | 114 |
| BseXI | GCAGC | 7 cut(s) | 16, 32, 413, 547, 896, 1261, 1587 |
| BsgI | GTGCAG | 2 cut(s) | 1203, 1607 |
| Bsh1236I | CGCG | 1 cut(s) | 1149 |
| BshFI | GGCC | 1 cut(s) | 517 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1212, 1359 |
| BsiHKCI | CYCGRG | 3 cut(s) | 293, 540, 1211 |
| BsiSI | CCGG | 3 cut(s) | 302, 633, 1010 |
| BslFI | GGGAC | 2 cut(s) | 331, 614 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 307, 637, 1124, 1240, 1570 |
| BsmAI | GTCTC | 5 cut(s) | 441, 971, 1144, 1208, 1713 |
| BsmFI | GGGAC | 2 cut(s) | 331, 614 |
| BsmI | GAATGC | 2 cut(s) | 1424, 1729 |
| BsnI | GGCC | 1 cut(s) | 517 |
| Bso31I | GGTCTC | 1 cut(s) | 1713 |
| BsoBI | CYCGRG | 3 cut(s) | 293, 540, 1211 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1212, 1359 |
| Bsp143I | GATC | 2 cut(s) | 726, 1051 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 48, 140, 578 |
| Bsp68I | TCGCGA | 1 cut(s) | 1149 |
| BspACI | CCGC | 5 cut(s) | 385, 932, 1162, 1376, 1512 |
| BspANI | GGCC | 1 cut(s) | 517 |
| BspCNI | CTCAG | 7 cut(s) | 257, 570, 609, 880, 1035, 1075, 1111 |
| BspFNI | CGCG | 1 cut(s) | 1149 |
| BspLI | GGNNCC | 2 cut(s) | 1008, 1562 |
| BspMAI | CTGCAG | 1 cut(s) | 565 |
| BspPI | GGATC | 1 cut(s) | 734 |
| BspQI | GCTCTTC | 1 cut(s) | 665 |
| BspTNI | GGTCTC | 1 cut(s) | 1713 |
| BsrI | ACTGG | 4 cut(s) | 318, 330, 1343, 1411 |
| BssECI | CCNNGG | 3 cut(s) | 631, 1389, 1556 |
| BssMI | GATC | 2 cut(s) | 726, 1051 |
| BssT1I | CCWWGG | 1 cut(s) | 1556 |
| Bst2UI | CCWGG | 2 cut(s) | 129, 1391 |
| Bst4CI | ACNGT | 1 cut(s) | 357 |
| Bst6I | CTCTTC | 1 cut(s) | 665 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 26, 1421, 1600 |
| BstC8I | GCNNGC | 3 cut(s) | 137, 760, 1160 |
| BstDEI | CTNAG | 9 cut(s) | 48, 140, 244, 578, 596, 888, 1043, 1083, 1119 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1122 |
| BstF5I | GGATG | 3 cut(s) | 10, 193, 1579 |
| BstFNI | CGCG | 1 cut(s) | 1149 |
| BstKTI | GATC | 2 cut(s) | 729, 1054 |
| BstMAI | GTCTC | 5 cut(s) | 441, 971, 1144, 1208, 1713 |
| BstMBI | GATC | 2 cut(s) | 726, 1051 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 26, 29, 141, 391, 764, 1155, 1421, 1600 |
| BstNI | CCWGG | 2 cut(s) | 129, 1391 |
| BstSCI | CCNGG | 4 cut(s) | 127, 300, 631, 1389 |
| BstSFI | CTRYAG | 2 cut(s) | 561, 1350 |
| BstUI | CGCG | 1 cut(s) | 1149 |
| BstV1I | GCAGC | 7 cut(s) | 16, 32, 413, 547, 896, 1261, 1587 |
| BstV2I | GAAGAC | 2 cut(s) | 636, 1629 |
| BstX2I | RGATCY | 1 cut(s) | 726 |
| BstYI | RGATCY | 1 cut(s) | 726 |
| BsuRI | GGCC | 1 cut(s) | 517 |
| BtrI | CACGTC | 1 cut(s) | 1187 |
| BtsCI | GGATG | 3 cut(s) | 10, 193, 1579 |
| BtsI | GCAGTG | 1 cut(s) | 1648 |
| BtsIMutI | CAGTG | 4 cut(s) | 337, 528, 604, 1648 |
| BtuMI | TCGCGA | 1 cut(s) | 1149 |
| Cac8I | GCNNGC | 3 cut(s) | 137, 760, 1160 |
| CaiI | CAGNNNCTG | 2 cut(s) | 26, 1600 |
| Csp6I | GTAC | 1 cut(s) | 537 |
| CviAII | CATG | 8 cut(s) | 475, 689, 742, 818, 958, 1258, 1284, 1747 |
| CviQI | GTAC | 1 cut(s) | 537 |
| DdeI | CTNAG | 9 cut(s) | 48, 140, 244, 578, 596, 888, 1043, 1083, 1119 |
| DpnI | GATC | 2 cut(s) | 728, 1053 |
| DpnII | GATC | 2 cut(s) | 726, 1051 |
| DraIII | CACNNNGTG | 1 cut(s) | 1037 |
| Eam1104I | CTCTTC | 1 cut(s) | 665 |
| EarI | CTCTTC | 1 cut(s) | 665 |
| Ecl136II | GAGCTC | 1 cut(s) | 1210 |
| Eco130I | CCWWGG | 1 cut(s) | 1556 |
| Eco24I | GRGCYC | 1 cut(s) | 1212 |
| Eco31I | GGTCTC | 1 cut(s) | 1713 |
| Eco53kI | GAGCTC | 1 cut(s) | 1210 |
| Eco57I | CTGAAG | 3 cut(s) | 123, 489, 815 |
| Eco88I | CYCGRG | 3 cut(s) | 293, 540, 1211 |
| EcoICRI | GAGCTC | 1 cut(s) | 1210 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1122 |
| EcoRI | GAATTC | 2 cut(s) | 361, 961 |
| EcoRII | CCWGG | 2 cut(s) | 127, 1389 |
| EcoT14I | CCWWGG | 1 cut(s) | 1556 |
| EcoT22I | ATGCAT | 2 cut(s) | 226, 1426 |
| EcoT38I | GRGCYC | 1 cut(s) | 1212 |
| ErhI | CCWWGG | 1 cut(s) | 1556 |
| FaeI | CATG | 8 cut(s) | 478, 692, 745, 821, 961, 1261, 1287, 1750 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 819, 851, 909, 941, 921, 953, 1540, 1572 |
| FaqI | GGGAC | 2 cut(s) | 331, 614 |
| FatI | CATG | 8 cut(s) | 474, 688, 741, 817, 957, 1257, 1283, 1746 |
| FauI | CCCGC | 1 cut(s) | 1505 |
| Fnu4HI | GCNGC | 7 cut(s) | 21, 30, 427, 561, 885, 1250, 1601 |
| FokI | GGATG | 3 cut(s) | 17, 200, 1586 |
| FriOI | GRGCYC | 1 cut(s) | 1212 |
| Fsp4HI | GCNGC | 7 cut(s) | 21, 30, 427, 561, 885, 1250, 1601 |
| FspBI | CTAG | 5 cut(s) | 480, 695, 947, 1253, 1604 |
| GluI | GCNGC | 7 cut(s) | 21, 30, 427, 561, 885, 1250, 1601 |
| HaeIII | GGCC | 1 cut(s) | 517 |
| HapII | CCGG | 3 cut(s) | 302, 633, 1010 |
| Hin1II | CATG | 8 cut(s) | 478, 692, 745, 821, 961, 1261, 1287, 1750 |
| HpaII | CCGG | 3 cut(s) | 302, 633, 1010 |
| HphI | GGTGA | 9 cut(s) | 359, 486, 710, 1049, 1134, 1482, 1496, 1511, 1545 |
| Hpy166II | GTNNAC | 1 cut(s) | 1040 |
| Hpy188I | TCNGA | 7 cut(s) | 103, 205, 271, 898, 991, 1267, 1471 |
| Hpy8I | GTNNAC | 1 cut(s) | 1040 |
| Hpy99I | CGWCG | 1 cut(s) | 1445 |
| HpyAV | CCTTC | 2 cut(s) | 856, 1234 |
| HpyCH4III | ACNGT | 1 cut(s) | 357 |
| HpyCH4IV | ACGT | 3 cut(s) | 84, 851, 1186 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 26, 29, 141, 391, 764, 1155, 1421, 1600 |
| HpyF3I | CTNAG | 9 cut(s) | 48, 140, 244, 578, 596, 888, 1043, 1083, 1119 |
| HpySE526I | ACGT | 3 cut(s) | 84, 851, 1186 |
| Hsp92II | CATG | 8 cut(s) | 478, 692, 745, 821, 961, 1261, 1287, 1750 |
| Kzo9I | GATC | 2 cut(s) | 726, 1051 |
| LguI | GCTCTTC | 1 cut(s) | 665 |
| LmnI | GCTCC | 4 cut(s) | 1006, 1560, 1591, 1597 |
| Lsp1109I | GCAGC | 7 cut(s) | 16, 32, 413, 547, 896, 1261, 1587 |
| LweI | GCATC | 9 cut(s) | 211, 233, 279, 691, 747, 1371, 1411, 1491, 1725 |
| MaeI | CTAG | 5 cut(s) | 480, 695, 947, 1253, 1604 |
| MaeII | ACGT | 3 cut(s) | 84, 851, 1186 |
| MaeIII | GTNAC | 6 cut(s) | 64, 347, 526, 714, 1106, 1643 |
| MalI | GATC | 2 cut(s) | 728, 1053 |
| MboI | GATC | 2 cut(s) | 726, 1051 |
| MflI | RGATCY | 1 cut(s) | 726 |
| MhlI | GDGCHC | 2 cut(s) | 1212, 1359 |
| MluCI | AATT | 8 cut(s) | 361, 546, 951, 961, 1025, 1151, 1180, 1445 |
| MlyI | GAGTC | 8 cut(s) | 165, 636, 650, 978, 1094, 1130, 1442, 1460 |
| MmeI | TCCRAC | 2 cut(s) | 993, 1113 |
| MnlI | CCTC | 6 cut(s) | 135, 507, 757, 976, 1012, 1155 |
| Mph1103I | ATGCAT | 2 cut(s) | 226, 1426 |
| MseI | TTAA | 7 cut(s) | 14, 398, 431, 617, 954, 1059, 1403 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1572 |
| MspA1I | CMGCKG | 2 cut(s) | 385, 887 |
| MspI | CCGG | 3 cut(s) | 302, 633, 1010 |
| MspR9I | CCNGG | 4 cut(s) | 129, 302, 633, 1391 |
| Mva1269I | GAATGC | 2 cut(s) | 1424, 1729 |
| MvaI | CCWGG | 2 cut(s) | 129, 1391 |
| MvnI | CGCG | 1 cut(s) | 1149 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 26, 29, 141, 391, 764, 1155, 1421, 1600 |
| NciI | CCSGG | 2 cut(s) | 302, 633 |
| NdeII | GATC | 2 cut(s) | 726, 1051 |
| NlaIII | CATG | 8 cut(s) | 478, 692, 745, 821, 961, 1261, 1287, 1750 |
| NlaIV | GGNNCC | 2 cut(s) | 1008, 1562 |
| NmuCI | GTSAC | 3 cut(s) | 347, 526, 1643 |
| NruI | TCGCGA | 1 cut(s) | 1149 |
| NsiI | ATGCAT | 2 cut(s) | 226, 1426 |
| PaeR7I | CTCGAG | 2 cut(s) | 540, 1211 |
| PciSI | GCTCTTC | 1 cut(s) | 665 |
| PctI | GAATGC | 2 cut(s) | 1424, 1729 |
| PfeI | GAWTC | 8 cut(s) | 92, 119, 566, 899, 1262, 1331, 1487, 1516 |
| PfoI | TCCNGGA | 1 cut(s) | 300 |
| PkrI | GCNGC | 7 cut(s) | 22, 31, 428, 562, 886, 1251, 1602 |
| PleI | GAGTC | 8 cut(s) | 164, 635, 649, 978, 1093, 1129, 1441, 1460 |
| PpsI | GAGTC | 8 cut(s) | 164, 635, 649, 978, 1093, 1129, 1441, 1460 |
| PshBI | ATTAAT | 1 cut(s) | 398 |
| Psp124BI | GAGCTC | 1 cut(s) | 1212 |
| Psp1406I | AACGTT | 1 cut(s) | 84 |
| Psp6I | CCWGG | 2 cut(s) | 127, 1389 |
| PspGI | CCWGG | 2 cut(s) | 127, 1389 |
| PspN4I | GGNNCC | 2 cut(s) | 1008, 1562 |
| PspXI | VCTCGAGB | 1 cut(s) | 540 |
| PstI | CTGCAG | 1 cut(s) | 565 |
| PstNI | CAGNNNCTG | 2 cut(s) | 26, 1600 |
| PsuI | RGATCY | 1 cut(s) | 726 |
| PvuII | CAGCTG | 1 cut(s) | 887 |
| RruI | TCGCGA | 1 cut(s) | 1149 |
| RsaI | GTAC | 1 cut(s) | 538 |
| RsaNI | GTAC | 1 cut(s) | 537 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1572 |
| SacI | GAGCTC | 1 cut(s) | 1212 |
| SapI | GCTCTTC | 1 cut(s) | 665 |
| SaqAI | TTAA | 7 cut(s) | 14, 398, 431, 617, 954, 1059, 1403 |
| SatI | GCNGC | 7 cut(s) | 21, 30, 427, 561, 885, 1250, 1601 |
| Sau3AI | GATC | 2 cut(s) | 726, 1051 |
| SchI | GAGTC | 8 cut(s) | 165, 636, 650, 978, 1094, 1130, 1442, 1460 |
| ScrFI | CCNGG | 4 cut(s) | 129, 302, 633, 1391 |
| SduI | GDGCHC | 2 cut(s) | 1212, 1359 |
| SfaNI | GCATC | 9 cut(s) | 211, 233, 279, 691, 747, 1371, 1411, 1491, 1725 |
| SfcI | CTRYAG | 2 cut(s) | 561, 1350 |
| Sfr274I | CTCGAG | 2 cut(s) | 540, 1211 |
| SlaI | CTCGAG | 2 cut(s) | 540, 1211 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1572 |
| SmlI | CTYRAG | 4 cut(s) | 540, 836, 1190, 1211 |
| SmoI | CTYRAG | 4 cut(s) | 540, 836, 1190, 1211 |
| Sse9I | AATT | 8 cut(s) | 361, 546, 951, 961, 1025, 1151, 1180, 1445 |
| SsiI | CCGC | 5 cut(s) | 385, 932, 1162, 1376, 1512 |
| SspI | AATATT | 1 cut(s) | 913 |
| SspMI | CTAG | 5 cut(s) | 480, 695, 947, 1253, 1604 |
| SstI | GAGCTC | 1 cut(s) | 1212 |
| StyD4I | CCNGG | 4 cut(s) | 127, 300, 631, 1389 |
| StyI | CCWWGG | 1 cut(s) | 1556 |
| TaaI | ACNGT | 1 cut(s) | 357 |
| TaiI | ACGT | 3 cut(s) | 87, 854, 1189 |
| TaqI | TCGA | 5 cut(s) | 416, 541, 647, 731, 1212 |
| TasI | AATT | 8 cut(s) | 361, 546, 951, 961, 1025, 1151, 1180, 1445 |
| TfiI | GAWTC | 8 cut(s) | 92, 119, 566, 899, 1262, 1331, 1487, 1516 |
| Tru1I | TTAA | 7 cut(s) | 14, 398, 431, 617, 954, 1059, 1403 |
| Tru9I | TTAA | 7 cut(s) | 14, 398, 431, 617, 954, 1059, 1403 |
| TscAI | CASTG | 4 cut(s) | 337, 535, 604, 1648 |
| TseFI | GTSAC | 3 cut(s) | 347, 526, 1643 |
| TseI | GCWGC | 7 cut(s) | 20, 29, 426, 560, 884, 1249, 1600 |
| Tsp45I | GTSAC | 3 cut(s) | 347, 526, 1643 |
| TspDTI | ATGAA | 9 cut(s) | 186, 357, 434, 857, 974, 1092, 1412, 1466, 1671 |
| TspGWI | ACGGA | 1 cut(s) | 1213 |
| TspRI | CASTG | 4 cut(s) | 337, 535, 604, 1648 |
| VspI | ATTAAT | 1 cut(s) | 398 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1122 |
| XapI | RAATTY | 3 cut(s) | 361, 961, 1025 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1100 |
| XhoI | CTCGAG | 2 cut(s) | 540, 1211 |
| XspI | CTAG | 5 cut(s) | 480, 695, 947, 1253, 1604 |
| Zsp2I | ATGCAT | 2 cut(s) | 226, 1426 |