Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0009177

Physical Location & Seq

Genomic Coordinates Forward (+)

4310214 .. 4313098

Gene Structure 2885 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG055600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGGATTTGTGGGTTGTTGCCGCAGCTGCCGGTGCTGGATATTTGACCAAGTATTGGCAGAAACTTTCGAGGGAGAGGGATAAGGATGGCTTGTTAAATGTTTCTTTTGGGGATGCAAATCTTGAGAAACCTGAGTCCCCAAGCTCTTCCCTCCGCAGACACAGGGCTAGAAAACCAGTTTCAGGTGAGAGAGTAGCGGATGTTAACGTCTGGGGAGGTGTTTCTGACACCGAAGAGGCTTCTTCTAGTGGGTATGATGGTGAAAAGCTGGCAAGTCTGGTGAGTTACCAACATTGCAATGTACTTTCTCTATCAAATATATCACCAGTATACCAAGCAAACAAAAATGAGAATGGAGATGAAAGTAGGCAAAATAATGACTTTGATGACAATACTGGTGCCATGTTACCTAAATCTTCCAATGGAGAAAAGGGTTCTTTTCATGCTCCTCTGAGGAACAGAAGGTCTTTAAGAACTGAACATTTACATGGGCATATTGTTAAGCCTCTAAATTCCTTAGAAAGTTGTCTGATGGCTCAGTTATATAAAGAGCGTGCTGAAACAAGTGTCCTTACCCTTCCTTCACCATCCACTCCAAGTATGAGACCATTGATTGTGAGTGATGGAAGCCGAATAATTAGCAGAGCAAATGGTGACCATTTCAGTGCTCAGATTGGAATCGAGGAAAATAAGTTGCATAAGGAAGACCATTTAGAAACAAATGAAAATGCCTCTGGGATTCCTCCACTACTAAAACTTGGTTGCCTGGATCTCCCAAAGAAGATGAAAATTGAGACAGGAAAGGGGCAGACTGGTAGATCCAACAGTTCCAGTCACACGGCCAGCAGAAAACACTTGCATGTTGAAGGTTCACCAGATGGAGTTGTTCTACTCTGTCTTGGGGTTTCTATTGGCGTAATATCTTCTTTCATTGCAAATAGAAAGGAAGTTGACAAGTTGAAAGACGTATTGAAGCAGACCGAAAGCTTGGTTGAAGATCTGCATGAAGAACTGGAAATGAAAGATTCAGTAACAGTGAAGGAGCTAACTAGTGAGAATTATGGGTCACAGGATACTTGTGACAATTTGGATTTGAACAGGGCCCTAAATCCTTTTTCTGCTGAACAGAATATGGACAAGTATGATGGTAGAGATTCATATGAGCAGAAAGCTGAGGAGAGTTCAGAGTCGATGAGTAAAATAGAGGCAGAGCTTGAAGCTGAACTTGAGAGGTTGGGGCTAAACATGAATACTTCTACTTTGGAGGGAAGAGTAACTGATCTTGATGAGCTTGACCCAGACTTGATGGCAGATTTTGCTCAAGGCGAATTGAGAGCTGAAATGGTTGGTGGGCACACTGTTCCGCAACCCGAGTCAAATGAGAATGCAAGCAGCACCTCCACTGCTCATCACTTTGGAAACTATGCAGTTTCTCCTAGAGAGCTTAGCTTGCGTCTGCATGAAGTTATCCAATCAAGACTGGAGGAACGTATCCAGGAGCTTGAGGCAGCACTACAAAGCAGCCAGAAGAAGGTCCGCATTGTGGAATCAGAGGATAAGGATTGTTTGAGAAATCTCTCAAACAGTTCTGTGCAGTCCACAATCCGAGATGGTAGCAACCAGAAGGAGGTCCGCATTGTGGAATCAGAGCATAAGGATTGTTTGAGGGATCTCTCAAACAGTTCTGTGCAGTCCACAATCCAAGATGGTAGCAGCCAGAAGGAGGTCCGCATTGGGGAATCAGAGCATAAGGATTGTGTGAGGGATCTCTCAAACAGTTCTGTGCAGTCCACAATCCGAGATGGTAGCAGCCAGAAGGAGCTCCGCATTGTGGAATCAGAAGATGGTACTAATTCCAAAGAACAAAGCCAAACCATCATAGAGCCTCTAGTCATGAATTTAGCAGGGGAAGCTCTAGATGCATACAATGAGGCTTACGAAGAGTTGATGAAGCTCAGTGAATCGGAAGAGGAGGATTCACCTTGTCAAGATATTGAAACATTCCGAGATCAAATCCGCAATCAAAGTTTTGATGTGAATGGCTCCATTGGGCATTTTGCTCTCGAGGAAGAGAAATGGATAGGGGATGAGCACATTTCCATGGTTGAGTGTTCTGTCAGTGAGGGGGAGAATACCAATTCTGATGATGAGATGGAGAAACAGCTAATACTGCAGATTGTGGAGAAGACCAAGAAAGGTTCTCCTGTAGTCCTGAATGCACAAAAGTGGTTGTTTTCGATGAATGATTATGATATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

752

Amino Acids

83.5

Weight (kDa)

4.84

Isoelectric Point (pI)

53.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08010 AT5G61040
fragaria_vesca	FvH4_5g13830 FvH4_5g13830 FvH4_5g13830
malus_domestica	MD14G1212000.v1.1
prunus_persica	Prupe.5G205200_v2.0.a1 Prupe.5G205200_v2.0.a1
pyrus_communis	pycom06g17960 pycom14g17560
rosa_chinensis	RchiOBHm_Chr7g0183101
rosa_laevigata	RLG00000005078
rosa_multiflora	Rmu_ssc0000111.1_g000007
rosa_roxburghii	Rroxscaffold_3G00270760
rosa_rugosa	Rorug06G0453000 Rorug06G0453000 Rorug06G0453100.1
rosa_samantha	Rh7AG056100 Rh7BG055400 Rh7CG056900 Rh7DG055600
rosa_wichuraiana	Rw7G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	398
AccB7I	CCANNNNNTGG	1 cut(s)	54
AccI	GTMKAC	1 cut(s)	330
AciI	CCGC	9 cut(s)	21, 154, 197, 1364, 1537, 1633, 1729, 1825, 2017
AclWI	GGATC	4 cut(s)	777, 813, 1677, 1773
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	2 cut(s)	511, 1897
AfaI	GTAC	2 cut(s)	303, 1849
AfiI	CCNNNNNNNGG	9 cut(s)	54, 182, 1531, 1543, 1627, 1639, 1723, 1735, 1831
AgsI	TTSAA	7 cut(s)	866, 961, 973, 995, 1096, 1217, 1997
AhlI	ACTAGT	1 cut(s)	1049
AjnI	CCWGG	2 cut(s)	765, 1494
AleI	CACNNNNGTG	1 cut(s)	2224
Alw21I	GWGCWC	3 cut(s)	670, 1824, 2094
Alw26I	GTCTC	2 cut(s)	598, 788
AlwI	GGATC	4 cut(s)	777, 813, 1677, 1773
Ama87I	CYCGRG	2 cut(s)	1370, 2063
AoxI	GGCC	2 cut(s)	840, 1101
ApaI	GGGCCC	1 cut(s)	1105
ApeKI	GCWGC	7 cut(s)	23, 26, 1392, 1508, 1521, 1713, 1809
ApoI	RAATTY	2 cut(s)	511, 1897
AspS9I	GGNCC	5 cut(s)	1101, 1102, 1534, 1630, 1726
AsuHPI	GGTGA	8 cut(s)	197, 272, 292, 315, 576, 665, 864, 1971
AvaI	CYCGRG	2 cut(s)	1370, 2063
AvaII	GGWCC	3 cut(s)	1534, 1630, 1726
BaeGI	GKGCMC	2 cut(s)	1105, 1356
BanI	GGYRCC	1 cut(s)	398
BanII	GRGCYC	2 cut(s)	1105, 1824
BbsI	GAAGAC	2 cut(s)	711, 2192
Bbv12I	GWGCWC	3 cut(s)	670, 1824, 2094
BbvCI	CCTCAGC	1 cut(s)	1173
BbvI	GCAGC	7 cut(s)	13, 35, 1404, 1520, 1533, 1725, 1821
BceAI	ACGGC	1 cut(s)	855
BciT130I	CCWGG	2 cut(s)	767, 1496
BciVI	GTATCC	2 cut(s)	1066, 1502
BcoDI	GTCTC	2 cut(s)	598, 788
BcuI	ACTAGT	1 cut(s)	1049
BfaI	CTAG	6 cut(s)	168, 246, 1050, 1437, 1889, 1916
BfmI	CTRYAG	2 cut(s)	2171, 2205
BfuI	GTATCC	2 cut(s)	1066, 1502
BglII	AGATCT	1 cut(s)	997
BisI	GCNGC	8 cut(s)	21, 24, 27, 1393, 1509, 1522, 1714, 1810
BlpI	GCTNAGC	1 cut(s)	1445
BlsI	GCNGC	8 cut(s)	22, 25, 28, 1394, 1510, 1523, 1715, 1811
Bme1390I	CCNGG	2 cut(s)	767, 1496
Bme18I	GGWCC	3 cut(s)	1534, 1630, 1726
BmeT110I	CYCGRG	2 cut(s)	1370, 2063
BmgT120I	GGNCC	5 cut(s)	1101, 1102, 1534, 1630, 1726
BmiI	GGNNCC	3 cut(s)	400, 1103, 2044
BmrFI	CCNGG	2 cut(s)	767, 1496
BmsI	GCATC	2 cut(s)	103, 1909
BpiI	GAAGAC	2 cut(s)	711, 2192
BpmI	CTGGAG	1 cut(s)	1502
Bpu10I	CCTNAGC	1 cut(s)	1173
Bpu1102I	GCTNAGC	1 cut(s)	1445
BpuEI	CTTGAG	4 cut(s)	143, 1247, 1305, 1523
BsaBI	GATNNNNATC	2 cut(s)	117, 677
BsaI	GGTCTC	1 cut(s)	598
BsaJI	CCNNGG	1 cut(s)	2100
Bsc4I	CCNNNNNNNGG	9 cut(s)	54, 182, 1531, 1543, 1627, 1639, 1723, 1735, 1831
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	7 cut(s)	176, 326, 400, 817, 831, 1017, 1485
Bse3DI	GCAATG	3 cut(s)	292, 304, 930
Bse8I	GATNNNNATC	2 cut(s)	117, 677
BseBI	CCWGG	2 cut(s)	767, 1496
BseDI	CCNNGG	1 cut(s)	2100
BseGI	GGATG	5 cut(s)	91, 118, 205, 587, 2092
BseJI	GATNNNNATC	2 cut(s)	117, 677
BseLI	CCNNNNNNNGG	9 cut(s)	54, 182, 1531, 1543, 1627, 1639, 1723, 1735, 1831
BseMI	GCAATG	3 cut(s)	292, 304, 930
BseMII	CTCAG	6 cut(s)	123, 443, 551, 683, 1164, 1969
BseNI	ACTGG	7 cut(s)	176, 326, 400, 817, 831, 1017, 1485
BseRI	GAGGAG	3 cut(s)	438, 1190, 1985
BseSI	GKGCMC	2 cut(s)	1105, 1356
BseXI	GCAGC	7 cut(s)	13, 35, 1404, 1520, 1533, 1725, 1821
BsgI	GTGCAG	3 cut(s)	1613, 1709, 1805
BshFI	GGCC	2 cut(s)	842, 1103
BshNI	GGYRCC	1 cut(s)	398
BsiHKAI	GWGCWC	3 cut(s)	670, 1824, 2094
BsiHKCI	CYCGRG	2 cut(s)	1370, 2063
BsiSI	CCGG	1 cut(s)	30
BslFI	GGGAC	1 cut(s)	121
BslI	CCNNNNNNNGG	9 cut(s)	54, 182, 1531, 1543, 1627, 1639, 1723, 1735, 1831
BsmAI	GTCTC	2 cut(s)	598, 788
BsmFI	GGGAC	1 cut(s)	121
BsmI	GAATGC	2 cut(s)	1390, 2221
BsnI	GGCC	2 cut(s)	842, 1103
Bso31I	GGTCTC	1 cut(s)	598
BsoBI	CYCGRG	2 cut(s)	1370, 2063
Bsp120I	GGGCCC	1 cut(s)	1101
Bsp1286I	GDGCHC	5 cut(s)	670, 1105, 1356, 1824, 2094
Bsp143I	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
Bsp1720I	GCTNAGC	1 cut(s)	1445
Bsp19I	CCATGG	1 cut(s)	2100
BspACI	CCGC	9 cut(s)	21, 154, 197, 1364, 1537, 1633, 1729, 1825, 2017
BspANI	GGCC	2 cut(s)	842, 1103
BspCNI	CTCAG	6 cut(s)	124, 444, 550, 682, 1165, 1968
BspHI	TCATGA	1 cut(s)	1893
BspLI	GGNNCC	3 cut(s)	400, 1103, 2044
BspMAI	CTGCAG	1 cut(s)	2175
BspPI	GGATC	4 cut(s)	777, 813, 1677, 1773
BspQI	GCTCTTC	1 cut(s)	151
BspT107I	GGYRCC	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	598
BsrDI	GCAATG	3 cut(s)	292, 304, 930
BsrFI	RCCGGY	1 cut(s)	29
BsrI	ACTGG	7 cut(s)	176, 326, 400, 817, 831, 1017, 1485
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	1 cut(s)	2100
BssMI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
BssNAI	GTATAC	1 cut(s)	331
BssT1I	CCWWGG	1 cut(s)	2100
Bst1107I	GTATAC	1 cut(s)	331
Bst2UI	CCWGG	2 cut(s)	767, 1496
Bst4CI	ACNGT	6 cut(s)	827, 1036, 1360, 1586, 1682, 1778
Bst6I	CTCTTC	6 cut(s)	151, 228, 1264, 1935, 1962, 2064
BstAPI	GCANNNNNTGC	1 cut(s)	1316
BstC8I	GCNNGC	5 cut(s)	270, 555, 844, 1390, 1451
BstDEI	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1173, 1445, 1955
BstDSI	CCRYGG	1 cut(s)	2100
BstEII	GGTNACC	1 cut(s)	653
BstF5I	GGATG	5 cut(s)	91, 118, 205, 587, 2092
BstKTI	GATC	7 cut(s)	772, 821, 1000, 1282, 1672, 1768, 2011
BstMAI	GTCTC	2 cut(s)	598, 788
BstMBI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
BstMWI	GCNNNNNNNGC	7 cut(s)	26, 32, 1316, 1450, 1910, 1919, 2170
BstNI	CCWGG	2 cut(s)	767, 1496
BstNSI	RCATGY	1 cut(s)	863
BstPI	GGTNACC	1 cut(s)	653
BstSCI	CCNGG	2 cut(s)	765, 1494
BstSFI	CTRYAG	2 cut(s)	2171, 2205
BstSLI	GKGCMC	2 cut(s)	1105, 1356
BstV1I	GCAGC	7 cut(s)	13, 35, 1404, 1520, 1533, 1725, 1821
BstV2I	GAAGAC	2 cut(s)	711, 2192
BstX2I	RGATCY	5 cut(s)	769, 818, 997, 1669, 1765
BstYI	RGATCY	5 cut(s)	769, 818, 997, 1669, 1765
BstZ17I	GTATAC	1 cut(s)	331
BsuI	GTATCC	2 cut(s)	1066, 1502
BsuRI	GGCC	2 cut(s)	842, 1103
BtgI	CCRYGG	1 cut(s)	2100
BtsCI	GGATG	5 cut(s)	91, 118, 205, 587, 2092
BtsI	GCAGTG	1 cut(s)	1401
BtsIMutI	CAGTG	6 cut(s)	670, 1041, 1356, 1401, 1963, 2125
Cac8I	GCNNGC	5 cut(s)	270, 555, 844, 1390, 1451
CciI	TCATGA	1 cut(s)	1893
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	5 cut(s)	1101, 1102, 1534, 1630, 1726
CseI	GACGC	1 cut(s)	1442
Csp6I	GTAC	2 cut(s)	302, 1848
CviAII	CATG	9 cut(s)	403, 443, 488, 860, 1004, 1246, 1460, 1894, 2101
CviQI	GTAC	2 cut(s)	302, 1848
DdeI	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1173, 1445, 1955
DpnI	GATC	7 cut(s)	771, 820, 999, 1281, 1671, 1767, 2010
DpnII	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	6 cut(s)	151, 228, 1264, 1935, 1962, 2064
EarI	CTCTTC	6 cut(s)	151, 228, 1264, 1935, 1962, 2064
Ecl136II	GAGCTC	1 cut(s)	1822
Eco130I	CCWWGG	1 cut(s)	2100
Eco24I	GRGCYC	2 cut(s)	1105, 1824
Eco31I	GGTCTC	1 cut(s)	598
Eco32I	GATATC	1 cut(s)	2254
Eco47I	GGWCC	3 cut(s)	1534, 1630, 1726
Eco53kI	GAGCTC	1 cut(s)	1822
Eco88I	CYCGRG	2 cut(s)	1370, 2063
Eco91I	GGTNACC	1 cut(s)	653
EcoICRI	GAGCTC	1 cut(s)	1822
EcoO109I	RGGNCCY	2 cut(s)	1101, 1102
EcoO65I	GGTNACC	1 cut(s)	653
EcoRII	CCWGG	2 cut(s)	765, 1494
EcoRV	GATATC	1 cut(s)	2254
EcoT14I	CCWWGG	1 cut(s)	2100
EcoT22I	ATGCAT	1 cut(s)	1924
EcoT38I	GRGCYC	2 cut(s)	1105, 1824
ErhI	CCWWGG	1 cut(s)	2100
FaeI	CATG	9 cut(s)	406, 446, 491, 863, 1007, 1249, 1463, 1897, 2104
FalI	AAGNNNNNCTT	4 cut(s)	74, 106, 1209, 1241
FaqI	GGGAC	1 cut(s)	121
FatI	CATG	9 cut(s)	402, 442, 487, 859, 1003, 1245, 1459, 1893, 2100
FauNDI	CATATG	1 cut(s)	1159
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	8 cut(s)	21, 24, 27, 1393, 1509, 1522, 1714, 1810
FokI	GGATG	5 cut(s)	98, 125, 212, 574, 2099
FriOI	GRGCYC	2 cut(s)	1105, 1824
Fsp4HI	GCNGC	8 cut(s)	21, 24, 27, 1393, 1509, 1522, 1714, 1810
FspBI	CTAG	6 cut(s)	168, 246, 1050, 1437, 1889, 1916
GluI	GCNGC	8 cut(s)	21, 24, 27, 1393, 1509, 1522, 1714, 1810
GsuI	CTGGAG	1 cut(s)	1502
HaeIII	GGCC	2 cut(s)	842, 1103
HapII	CCGG	1 cut(s)	30
HgaI	GACGC	1 cut(s)	1442
Hin1II	CATG	9 cut(s)	406, 446, 491, 863, 1007, 1249, 1463, 1897, 2104
HincII	GTYRAC	2 cut(s)	205, 952
HindII	GTYRAC	2 cut(s)	205, 952
HindIII	AAGCTT	1 cut(s)	985
HpaI	GTTAAC	1 cut(s)	205
HpaII	CCGG	1 cut(s)	30
HphI	GGTGA	8 cut(s)	197, 272, 292, 315, 576, 665, 864, 1971
Hpy166II	GTNNAC	7 cut(s)	205, 331, 872, 952, 1599, 1695, 1791
Hpy188III	TCNNGA	8 cut(s)	122, 1283, 1476, 1894, 1916, 1988, 2063, 2212
Hpy8I	GTNNAC	7 cut(s)	205, 331, 872, 952, 1599, 1695, 1791
HpyAV	CCTTC	9 cut(s)	456, 587, 591, 860, 1033, 1525, 1618, 1714, 1810
HpyCH4III	ACNGT	6 cut(s)	827, 1036, 1360, 1586, 1682, 1778
HpyCH4IV	ACGT	3 cut(s)	207, 966, 1489
HpyF10VI	GCNNNNNNNGC	7 cut(s)	26, 32, 1316, 1450, 1910, 1919, 2170
HpyF3I	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1173, 1445, 1955
HpySE526I	ACGT	3 cut(s)	207, 966, 1489
Hsp92II	CATG	9 cut(s)	406, 446, 491, 863, 1007, 1249, 1463, 1897, 2104
KspAI	GTTAAC	1 cut(s)	205
Kzo9I	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
LguI	GCTCTTC	1 cut(s)	151
LmnI	GCTCC	6 cut(s)	451, 1042, 1498, 1819, 1827, 2048
Lsp1109I	GCAGC	7 cut(s)	13, 35, 1404, 1520, 1533, 1725, 1821
LweI	GCATC	2 cut(s)	103, 1909
MaeI	CTAG	6 cut(s)	168, 246, 1050, 1437, 1889, 1916
MaeII	ACGT	3 cut(s)	207, 966, 1489
MaeIII	GTNAC	8 cut(s)	284, 405, 653, 833, 1030, 1065, 1079, 1273
MalI	GATC	7 cut(s)	771, 820, 999, 1281, 1671, 1767, 2010
MboI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
MflI	RGATCY	5 cut(s)	769, 818, 997, 1669, 1765
MhlI	GDGCHC	5 cut(s)	670, 1105, 1356, 1824, 2094
MluCI	AATT	9 cut(s)	511, 636, 789, 1057, 1084, 1328, 1852, 1897, 2137
MlyI	GAGTC	3 cut(s)	143, 1196, 1382
MmeI	TCCRAC	1 cut(s)	846
Mph1103I	ATGCAT	1 cut(s)	1924
MseI	TTAA	4 cut(s)	95, 204, 470, 501
MslI	CAYNNNNRTG	6 cut(s)	297, 486, 663, 858, 2099, 2224
MspA1I	CMGCKG	1 cut(s)	26
MspI	CCGG	1 cut(s)	30
MspR9I	CCNGG	2 cut(s)	767, 1496
Mva1269I	GAATGC	2 cut(s)	1390, 2221
MvaI	CCWGG	2 cut(s)	767, 1496
MwoI	GCNNNNNNNGC	7 cut(s)	26, 32, 1316, 1450, 1910, 1919, 2170
NcoI	CCATGG	1 cut(s)	2100
NdeI	CATATG	1 cut(s)	1159
NdeII	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
NlaIII	CATG	9 cut(s)	406, 446, 491, 863, 1007, 1249, 1463, 1897, 2104
NlaIV	GGNNCC	3 cut(s)	400, 1103, 2044
NmuCI	GTSAC	4 cut(s)	653, 833, 1065, 1079
NsiI	ATGCAT	1 cut(s)	1924
NspI	RCATGY	1 cut(s)	863
OliI	CACNNNNGTG	1 cut(s)	2224
PaeR7I	CTCGAG	1 cut(s)	2063
PagI	TCATGA	1 cut(s)	1893
PciSI	GCTCTTC	1 cut(s)	151
PctI	GAATGC	2 cut(s)	1390, 2221
PflMI	CCANNNNNTGG	1 cut(s)	54
PfoI	TCCNGGA	1 cut(s)	1494
PkrI	GCNGC	8 cut(s)	22, 25, 28, 1394, 1510, 1523, 1715, 1811
PleI	GAGTC	3 cut(s)	142, 1195, 1381
PpsI	GAGTC	3 cut(s)	142, 1195, 1381
Psp124BI	GAGCTC	1 cut(s)	1824
Psp6I	CCWGG	2 cut(s)	765, 1494
PspEI	GGTNACC	1 cut(s)	653
PspGI	CCWGG	2 cut(s)	765, 1494
PspN4I	GGNNCC	3 cut(s)	400, 1103, 2044
PspOMI	GGGCCC	1 cut(s)	1101
PspPI	GGNCC	5 cut(s)	1101, 1102, 1534, 1630, 1726
PstI	CTGCAG	1 cut(s)	2175
PsuI	RGATCY	5 cut(s)	769, 818, 997, 1669, 1765
PvuII	CAGCTG	1 cut(s)	26
RsaI	GTAC	2 cut(s)	303, 1849
RsaNI	GTAC	2 cut(s)	302, 1848
RseI	CAYNNNNRTG	6 cut(s)	297, 486, 663, 858, 2099, 2224
SacI	GAGCTC	1 cut(s)	1824
SapI	GCTCTTC	1 cut(s)	151
SaqAI	TTAA	4 cut(s)	95, 204, 470, 501
SatI	GCNGC	8 cut(s)	21, 24, 27, 1393, 1509, 1522, 1714, 1810
Sau3AI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1765, 2008
Sau96I	GGNCC	5 cut(s)	1101, 1102, 1534, 1630, 1726
SchI	GAGTC	3 cut(s)	143, 1196, 1382
ScrFI	CCNGG	2 cut(s)	767, 1496
SduI	GDGCHC	5 cut(s)	670, 1105, 1356, 1824, 2094
SfaNI	GCATC	2 cut(s)	103, 1909
SfcI	CTRYAG	2 cut(s)	2171, 2205
Sfr274I	CTCGAG	1 cut(s)	2063
SinI	GGWCC	3 cut(s)	1534, 1630, 1726
SlaI	CTCGAG	1 cut(s)	2063
SmiMI	CAYNNNNRTG	6 cut(s)	297, 486, 663, 858, 2099, 2224
SmlI	CTYRAG	5 cut(s)	122, 1226, 1320, 1502, 2063
SmoI	CTYRAG	5 cut(s)	122, 1226, 1320, 1502, 2063
SpeI	ACTAGT	1 cut(s)	1049
Sse9I	AATT	9 cut(s)	511, 636, 789, 1057, 1084, 1328, 1852, 1897, 2137
SsiI	CCGC	9 cut(s)	21, 154, 197, 1364, 1537, 1633, 1729, 1825, 2017
SspMI	CTAG	6 cut(s)	168, 246, 1050, 1437, 1889, 1916
SstI	GAGCTC	1 cut(s)	1824
StyD4I	CCNGG	2 cut(s)	765, 1494
StyI	CCWWGG	1 cut(s)	2100
TaaI	ACNGT	6 cut(s)	827, 1036, 1360, 1586, 1682, 1778
TaiI	ACGT	3 cut(s)	210, 969, 1492
TaqI	TCGA	5 cut(s)	68, 681, 1190, 2064, 2237
TaqII	GACCGA	1 cut(s)	995
TasI	AATT	9 cut(s)	511, 636, 789, 1057, 1084, 1328, 1852, 1897, 2137
TatI	WGTACW	1 cut(s)	301
TauI	GCSGC	1 cut(s)	23
Tru1I	TTAA	4 cut(s)	95, 204, 470, 501
Tru9I	TTAA	4 cut(s)	95, 204, 470, 501
TscAI	CASTG	6 cut(s)	670, 1041, 1363, 1408, 1963, 2125
TseFI	GTSAC	4 cut(s)	653, 833, 1065, 1079
TseI	GCWGC	7 cut(s)	23, 26, 1392, 1508, 1521, 1713, 1809
Tsp45I	GTSAC	4 cut(s)	653, 833, 1065, 1079
TspRI	CASTG	6 cut(s)	670, 1041, 1363, 1408, 1963, 2125
Van91I	CCANNNNNTGG	1 cut(s)	54
VpaK11BI	GGWCC	3 cut(s)	1534, 1630, 1726
XapI	RAATTY	2 cut(s)	511, 1897
XbaI	TCTAGA	1 cut(s)	1915
XceI	RCATGY	1 cut(s)	863
XhoI	CTCGAG	1 cut(s)	2063
XmiI	GTMKAC	1 cut(s)	330
XspI	CTAG	6 cut(s)	168, 246, 1050, 1437, 1889, 1916
Zsp2I	ATGCAT	1 cut(s)	1924

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.