Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009177

Physical Location & Seq

Genomic Coordinates Reverse (-)

63277100 .. 63280611

Gene Structure 3512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00270760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGATTTGTGGGTTGTTGCCGCAGCTGCCGGTGCTGGATATTTGACCAAGTATTGGCAGAAACTTTCGAGGGAGAGGGATAAGGATGGCTTGTTAAATGTTTCTTTTGGGGATGCAAATCTTGAGAAACCTGAGTCCCCAAGCTCTTCCCTCCGCAGACACAGGGATAGAAAACCAGTTTCAGGTGAGAGAGTAGCGGATATTAACGTCTGGGGAGGTGTTTCTGACACTGAAGAGGCTTCTACTAGTGGGTATGATGGTGAAAAGCTGGCAAGTCTGGTGAGTTACCAACATTGCAATGTACTTTCTCTATCAAATATATCACCAGTATACCAAGCAAACAAAAATGAGAATGGAGATGAAAGTAGGCAAAGTAATGATTTTGATGACAATACTGGTGCCATGTTACCTAAATCTTCCAATGGAGAAAAGGGTTCTTTTCATGCTCCTCTGAGGAACATAAGGTCTTTAAGAACTGAACATTCATATGGGTATATTGTTAGGCCTCTAAATTCCTTAGAAAGTTGTCTGATGGCTCAGTTATATAAAGAGCGTGCTGAAACAAGTGTCCTTACCCTTCCTTCACCATCCACTCCAAGTATGAGACCATTGATTGTGAGTGATGGAAGCCAAATAATTAGCAGAGCAAATGGTGACCATTTCAGTGCTCAGATTGGAATCGAGGAAAATAAGCTGCATAAGGAAGACCATTTAGAAACAAATGAAAATGGCACTGGGATTCCTCCACTACCAAAACTTGGTTGTCTGCATCACCCAAAGAAGATGAAAATTGAGACAGGAAAGAGGCAGACTGGTAGATCCAACAGTTCCAGTCACATGGCCAGCGGAAAACACTTGCATGTTGAAGTTCATGGCCTAATGCTTGTACCTTCATCAGGTTCACCAGATGGAGTAGTTCTACTATGTCTTGGGGTTTCTATTGGCGTAATATCTTCTTTCATTGCAAATAGAAAGGAAGTTGACAAGTTGAAAGACGTATTGAAGCAGACCGAGAGCCTGGTTGAAGATCTGCATGAAGAACTGGAAATGAAAGATTCAGTAACGGTGAAGGAGCTAACTAATGAGAATTATGGGTCACAGGATACTTGTGACAATTCAGTTTTTAACAGGGCCCTAAATCCTTTTTCTGCTGAACAGAAAATGGACAAGTATGATGGTAGAGATTCATATGAGCAGAAAGCTGAGGAGAGTTCAGAGTCGATGAGTAAAATAGAGGCAGAGCTTGAAGCTGAACTTGAGAGGTTGGGGCTAAACATGAATACTTCTACTTTGGAGGGAAGATTAACTGATCTTGATGAGAGGTGGAAATCTCCTCAATTCTTGTTAGCACTAATGGAGTTAAAAATTTTGCAGCTTGACCCAGACTTGATGGCAGATTTTGCTCAAGGCGAATTGAGAGCTGAAATGGTTGGTGGGCACACTGTTGCCCAACCCGAGTCAAATGAGAATGCAAGCAGCACCTCCACTGCTCATCACTTTGGAAACTATGCAGTTTCTCCTAGAGAGCTTAGCTTGCGTCTGCATGAAGTTATCCAATCAAGACTGGAGGAACGTATCCAGGAGCTTGAGGCAGCACTACAAAGCAGCCAGAAGAAGGTCCGCATTGTGGAATCAGAGGATAAGGATTGTTTGAGGGATCTCTCAAACAGTTCTGTGCAGTCCACAATCCAAGATGGTAGCAGCCAGAAGGAGGTCCGCATTGTGGAATCAGAAGATGGTACTAATTCCAAAGAACAAAGCCAAACCATCATAGAGCCTCTAGTCATGAATTTAGCAGGGGAAGCTCTAGATGCATACAATGAGGCTTACGAAGAGTTGATGAAGCTCAGTGAGTCGGAAGAGGAGGATTCACCTTGTCAAGTTATTGAAACATGCCGAGATCAAATCCGCCATCAAAGTTTTGATGTGAATGGCTCCATTGGGCATTTTGCTCTCGAGGAAGAGAAATGGTTAGGGGATGAGCACATTTCCATGGTCGAGTGTTCTGTCAGTGAGGGGGAGAATAGCAATTCTGATGATGAGATGGAGAAACAACTAATACAGCAGATTGTGGAGAAGACCAAGAAAGGTTCTCCTGTAGTCCTGAATGCACAAAAGTGGTTGTTTTCGATGAATGATTACGATATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

716

Amino Acids

79.64

Weight (kDa)

4.87

Isoelectric Point (pI)

52.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08010 AT5G61040
fragaria_vesca	FvH4_5g13830 FvH4_5g13830 FvH4_5g13830
malus_domestica	MD14G1212000.v1.1
prunus_persica	Prupe.5G205200_v2.0.a1 Prupe.5G205200_v2.0.a1
pyrus_communis	pycom06g17960 pycom14g17560
rosa_chinensis	RchiOBHm_Chr7g0183101
rosa_laevigata	RLG00000005078
rosa_multiflora	Rmu_ssc0000111.1_g000007
rosa_roxburghii	Rroxscaffold_3G00270760
rosa_rugosa	Rorug06G0453000 Rorug06G0453000 Rorug06G0453100.1
rosa_samantha	Rh7AG056100 Rh7BG055400 Rh7CG056900 Rh7DG055600
rosa_wichuraiana	Rw7G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	398
AccB7I	CCANNNNNTGG	2 cut(s)	54, 758
AccI	GTMKAC	1 cut(s)	330
AciI	CCGC	7 cut(s)	21, 154, 197, 846, 1621, 1717, 1909
AclWI	GGATC	2 cut(s)	813, 1665
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	3 cut(s)	511, 1365, 1789
AcuI	CTGAAG	1 cut(s)	252
AfaI	GTAC	3 cut(s)	303, 888, 1741
AfiI	CCNNNNNNNGG	8 cut(s)	54, 182, 758, 896, 1615, 1627, 1711, 1723
AgsI	TTSAA	6 cut(s)	866, 991, 1003, 1025, 1247, 1889
AhlI	ACTAGT	1 cut(s)	245
AjnI	CCWGG	2 cut(s)	1017, 1578
AleI	CACNNNNGTG	1 cut(s)	2116
Alw21I	GWGCWC	2 cut(s)	670, 1986
Alw26I	GTCTC	2 cut(s)	598, 788
AlwI	GGATC	2 cut(s)	813, 1665
Ama87I	CYCGRG	2 cut(s)	1454, 1955
AoxI	GGCC	4 cut(s)	503, 840, 874, 1131
ApaI	GGGCCC	1 cut(s)	1135
ApeKI	GCWGC	8 cut(s)	23, 26, 694, 1372, 1476, 1592, 1605, 1701
ApoI	RAATTY	3 cut(s)	511, 1365, 1789
AspS9I	GGNCC	4 cut(s)	1131, 1132, 1618, 1714
AvaI	CYCGRG	2 cut(s)	1454, 1955
AvaII	GGWCC	2 cut(s)	1618, 1714
BaeGI	GKGCMC	2 cut(s)	1135, 1440
BalI	TGGCCA	1 cut(s)	842
BanI	GGYRCC	1 cut(s)	398
BanII	GRGCYC	1 cut(s)	1135
BbsI	GAAGAC	2 cut(s)	711, 2084
Bbv12I	GWGCWC	2 cut(s)	670, 1986
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	8 cut(s)	13, 35, 681, 1384, 1488, 1604, 1617, 1713
BciT130I	CCWGG	2 cut(s)	1019, 1580
BciVI	GTATCC	2 cut(s)	1096, 1586
BcoDI	GTCTC	2 cut(s)	598, 788
BcuI	ACTAGT	1 cut(s)	245
BfaI	CTAG	4 cut(s)	246, 1521, 1781, 1808
BfmI	CTRYAG	1 cut(s)	2097
BfuI	GTATCC	2 cut(s)	1096, 1586
BglII	AGATCT	1 cut(s)	1027
BisI	GCNGC	9 cut(s)	21, 24, 27, 695, 1373, 1477, 1593, 1606, 1702
BlpI	GCTNAGC	1 cut(s)	1529
BlsI	GCNGC	9 cut(s)	22, 25, 28, 696, 1374, 1478, 1594, 1607, 1703
Bme1390I	CCNGG	2 cut(s)	1019, 1580
Bme18I	GGWCC	2 cut(s)	1618, 1714
BmeT110I	CYCGRG	2 cut(s)	1454, 1955
BmgT120I	GGNCC	4 cut(s)	1131, 1132, 1618, 1714
BmiI	GGNNCC	3 cut(s)	400, 1133, 1936
BmrFI	CCNGG	2 cut(s)	1019, 1580
BmrI	ACTGGG	1 cut(s)	744
BmsI	GCATC	3 cut(s)	103, 778, 1801
BmuI	ACTGGG	1 cut(s)	744
BpiI	GAAGAC	2 cut(s)	711, 2084
BpmI	CTGGAG	1 cut(s)	1586
Bpu10I	CCTNAGC	1 cut(s)	1203
Bpu1102I	GCTNAGC	1 cut(s)	1529
BpuEI	CTTGAG	4 cut(s)	143, 1277, 1389, 1607
BsaBI	GATNNNNATC	2 cut(s)	117, 677
BsaI	GGTCTC	1 cut(s)	598
BsaJI	CCNNGG	1 cut(s)	1992
Bsc4I	CCNNNNNNNGG	8 cut(s)	54, 182, 758, 896, 1615, 1627, 1711, 1723
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	8 cut(s)	176, 326, 400, 739, 817, 831, 1047, 1569
Bse3DI	GCAATG	3 cut(s)	292, 304, 960
Bse8I	GATNNNNATC	2 cut(s)	117, 677
BseBI	CCWGG	2 cut(s)	1019, 1580
BseDI	CCNNGG	1 cut(s)	1992
BseGI	GGATG	4 cut(s)	91, 118, 587, 1984
BseJI	GATNNNNATC	2 cut(s)	117, 677
BseLI	CCNNNNNNNGG	8 cut(s)	54, 182, 758, 896, 1615, 1627, 1711, 1723
BseMI	GCAATG	3 cut(s)	292, 304, 960
BseMII	CTCAG	6 cut(s)	123, 443, 551, 683, 1194, 1861
BseNI	ACTGG	8 cut(s)	176, 326, 400, 739, 817, 831, 1047, 1569
BseRI	GAGGAG	4 cut(s)	438, 1220, 1323, 1877
BseSI	GKGCMC	2 cut(s)	1135, 1440
BseXI	GCAGC	8 cut(s)	13, 35, 681, 1384, 1488, 1604, 1617, 1713
BsgI	GTGCAG	1 cut(s)	1697
BshFI	GGCC	4 cut(s)	505, 842, 876, 1133
BshNI	GGYRCC	1 cut(s)	398
BsiHKAI	GWGCWC	2 cut(s)	670, 1986
BsiHKCI	CYCGRG	2 cut(s)	1454, 1955
BsiSI	CCGG	1 cut(s)	30
BslFI	GGGAC	1 cut(s)	121
BslI	CCNNNNNNNGG	8 cut(s)	54, 182, 758, 896, 1615, 1627, 1711, 1723
BsmAI	GTCTC	2 cut(s)	598, 788
BsmFI	GGGAC	1 cut(s)	121
BsmI	GAATGC	2 cut(s)	1474, 2113
BsnI	GGCC	4 cut(s)	505, 842, 876, 1133
Bso31I	GGTCTC	1 cut(s)	598
BsoBI	CYCGRG	2 cut(s)	1454, 1955
Bsp120I	GGGCCC	1 cut(s)	1131
Bsp1286I	GDGCHC	4 cut(s)	670, 1135, 1440, 1986
Bsp143I	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
Bsp1720I	GCTNAGC	1 cut(s)	1529
Bsp19I	CCATGG	1 cut(s)	1992
BspACI	CCGC	7 cut(s)	21, 154, 197, 846, 1621, 1717, 1909
BspANI	GGCC	4 cut(s)	505, 842, 876, 1133
BspCNI	CTCAG	6 cut(s)	124, 444, 550, 682, 1195, 1860
BspHI	TCATGA	1 cut(s)	1785
BspLI	GGNNCC	3 cut(s)	400, 1133, 1936
BspPI	GGATC	2 cut(s)	813, 1665
BspQI	GCTCTTC	1 cut(s)	151
BspT107I	GGYRCC	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	598
BsrDI	GCAATG	3 cut(s)	292, 304, 960
BsrFI	RCCGGY	1 cut(s)	29
BsrI	ACTGG	8 cut(s)	176, 326, 400, 739, 817, 831, 1047, 1569
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	1 cut(s)	1992
BssMI	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
BssNAI	GTATAC	1 cut(s)	331
BssT1I	CCWWGG	1 cut(s)	1992
Bst1107I	GTATAC	1 cut(s)	331
Bst2UI	CCWGG	2 cut(s)	1019, 1580
Bst4CI	ACNGT	4 cut(s)	827, 1066, 1444, 1670
Bst6I	CTCTTC	5 cut(s)	151, 228, 1827, 1854, 1956
BstAPI	GCANNNNNTGC	1 cut(s)	1400
BstC8I	GCNNGC	5 cut(s)	270, 555, 844, 1474, 1535
BstDEI	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1203, 1529, 1847
BstDSI	CCRYGG	1 cut(s)	1992
BstEII	GGTNACC	1 cut(s)	653
BstENI	CCTNNNNNAGG	1 cut(s)	894
BstF5I	GGATG	4 cut(s)	91, 118, 587, 1984
BstKTI	GATC	5 cut(s)	821, 1030, 1312, 1660, 1903
BstMAI	GTCTC	2 cut(s)	598, 788
BstMBI	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 32, 1400, 1534, 1802, 1811
BstNI	CCWGG	2 cut(s)	1019, 1580
BstNSI	RCATGY	2 cut(s)	863, 1896
BstPI	GGTNACC	1 cut(s)	653
BstSCI	CCNGG	2 cut(s)	1017, 1578
BstSFI	CTRYAG	1 cut(s)	2097
BstSLI	GKGCMC	2 cut(s)	1135, 1440
BstV1I	GCAGC	8 cut(s)	13, 35, 681, 1384, 1488, 1604, 1617, 1713
BstV2I	GAAGAC	2 cut(s)	711, 2084
BstX2I	RGATCY	3 cut(s)	818, 1027, 1657
BstXI	CCANNNNNNTGG	1 cut(s)	838
BstYI	RGATCY	3 cut(s)	818, 1027, 1657
BstZ17I	GTATAC	1 cut(s)	331
BsuI	GTATCC	2 cut(s)	1096, 1586
BsuRI	GGCC	4 cut(s)	505, 842, 876, 1133
BtgI	CCRYGG	1 cut(s)	1992
BtsCI	GGATG	4 cut(s)	91, 118, 587, 1984
BtsI	GCAGTG	1 cut(s)	1485
BtsIMutI	CAGTG	7 cut(s)	228, 670, 732, 1440, 1485, 1855, 2017
Cac8I	GCNNGC	5 cut(s)	270, 555, 844, 1474, 1535
CciI	TCATGA	1 cut(s)	1785
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	4 cut(s)	1131, 1132, 1618, 1714
CseI	GACGC	1 cut(s)	1526
Csp6I	GTAC	3 cut(s)	302, 887, 1740
CviQI	GTAC	3 cut(s)	302, 887, 1740
DdeI	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1203, 1529, 1847
DpnI	GATC	5 cut(s)	820, 1029, 1311, 1659, 1902
DpnII	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	5 cut(s)	151, 228, 1827, 1854, 1956
EarI	CTCTTC	5 cut(s)	151, 228, 1827, 1854, 1956
EciI	GGCGGA	1 cut(s)	1898
Eco130I	CCWWGG	1 cut(s)	1992
Eco147I	AGGCCT	1 cut(s)	505
Eco24I	GRGCYC	1 cut(s)	1135
Eco31I	GGTCTC	1 cut(s)	598
Eco32I	GATATC	1 cut(s)	2146
Eco47I	GGWCC	2 cut(s)	1618, 1714
Eco57I	CTGAAG	1 cut(s)	252
Eco88I	CYCGRG	2 cut(s)	1454, 1955
Eco91I	GGTNACC	1 cut(s)	653
EcoNI	CCTNNNNNAGG	1 cut(s)	894
EcoO109I	RGGNCCY	2 cut(s)	1131, 1132
EcoO65I	GGTNACC	1 cut(s)	653
EcoRII	CCWGG	2 cut(s)	1017, 1578
EcoRV	GATATC	1 cut(s)	2146
EcoT14I	CCWWGG	1 cut(s)	1992
EcoT22I	ATGCAT	1 cut(s)	1816
EcoT38I	GRGCYC	1 cut(s)	1135
ErhI	CCWWGG	1 cut(s)	1992
FalI	AAGNNNNNCTT	4 cut(s)	74, 106, 1239, 1271
FaqI	GGGAC	1 cut(s)	121
FauNDI	CATATG	2 cut(s)	487, 1189
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	9 cut(s)	21, 24, 27, 695, 1373, 1477, 1593, 1606, 1702
FokI	GGATG	4 cut(s)	98, 125, 574, 1991
FriOI	GRGCYC	1 cut(s)	1135
Fsp4HI	GCNGC	9 cut(s)	21, 24, 27, 695, 1373, 1477, 1593, 1606, 1702
FspBI	CTAG	4 cut(s)	246, 1521, 1781, 1808
GluI	GCNGC	9 cut(s)	21, 24, 27, 695, 1373, 1477, 1593, 1606, 1702
GsuI	CTGGAG	1 cut(s)	1586
HaeIII	GGCC	4 cut(s)	505, 842, 876, 1133
HapII	CCGG	1 cut(s)	30
HgaI	GACGC	1 cut(s)	1526
HincII	GTYRAC	1 cut(s)	982
HindII	GTYRAC	1 cut(s)	982
HpaII	CCGG	1 cut(s)	30
Hpy166II	GTNNAC	4 cut(s)	331, 902, 982, 1683
Hpy188I	TCNGA	9 cut(s)	226, 453, 531, 672, 1216, 1636, 1732, 1858, 2035
Hpy188III	TCNNGA	7 cut(s)	122, 1313, 1560, 1786, 1808, 1955, 2104
Hpy8I	GTNNAC	4 cut(s)	331, 902, 982, 1683
HpyAV	CCTTC	6 cut(s)	587, 591, 900, 1063, 1609, 1702
HpyCH4III	ACNGT	4 cut(s)	827, 1066, 1444, 1670
HpyCH4IV	ACGT	3 cut(s)	207, 996, 1573
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 32, 1400, 1534, 1802, 1811
HpyF3I	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1203, 1529, 1847
HpySE526I	ACGT	3 cut(s)	207, 996, 1573
Kzo9I	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
LguI	GCTCTTC	1 cut(s)	151
LmnI	GCTCC	4 cut(s)	451, 1072, 1582, 1940
Lsp1109I	GCAGC	8 cut(s)	13, 35, 681, 1384, 1488, 1604, 1617, 1713
LweI	GCATC	3 cut(s)	103, 778, 1801
MaeI	CTAG	4 cut(s)	246, 1521, 1781, 1808
MaeII	ACGT	3 cut(s)	207, 996, 1573
MaeIII	GTNAC	7 cut(s)	284, 405, 653, 833, 1060, 1095, 1109
MalI	GATC	5 cut(s)	820, 1029, 1311, 1659, 1902
MboI	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
MflI	RGATCY	3 cut(s)	818, 1027, 1657
MhlI	GDGCHC	4 cut(s)	670, 1135, 1440, 1986
MlsI	TGGCCA	1 cut(s)	842
MluNI	TGGCCA	1 cut(s)	842
MlyI	GAGTC	4 cut(s)	143, 1226, 1466, 1862
MmeI	TCCRAC	2 cut(s)	846, 1836
Mox20I	TGGCCA	1 cut(s)	842
Mph1103I	ATGCAT	1 cut(s)	1816
MscI	TGGCCA	1 cut(s)	842
MseI	TTAA	6 cut(s)	95, 204, 470, 1125, 1304, 1361
MslI	CAYNNNNRTG	6 cut(s)	297, 486, 663, 858, 1991, 2116
Msp20I	TGGCCA	1 cut(s)	842
MspA1I	CMGCKG	2 cut(s)	26, 846
MspI	CCGG	1 cut(s)	30
MspR9I	CCNGG	2 cut(s)	1019, 1580
Mva1269I	GAATGC	2 cut(s)	1474, 2113
MvaI	CCWGG	2 cut(s)	1019, 1580
MwoI	GCNNNNNNNGC	6 cut(s)	26, 32, 1400, 1534, 1802, 1811
NcoI	CCATGG	1 cut(s)	1992
NdeI	CATATG	2 cut(s)	487, 1189
NdeII	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
NlaIV	GGNNCC	3 cut(s)	400, 1133, 1936
NmeAIII	GCCGAG	1 cut(s)	1922
NmuCI	GTSAC	4 cut(s)	653, 833, 1095, 1109
NsiI	ATGCAT	1 cut(s)	1816
NspI	RCATGY	2 cut(s)	863, 1896
OliI	CACNNNNGTG	1 cut(s)	2116
PaeR7I	CTCGAG	1 cut(s)	1955
PagI	TCATGA	1 cut(s)	1785
PceI	AGGCCT	1 cut(s)	505
PciSI	GCTCTTC	1 cut(s)	151
PctI	GAATGC	2 cut(s)	1474, 2113
PfeI	GAWTC	7 cut(s)	678, 739, 1055, 1184, 1631, 1727, 1868
PflMI	CCANNNNNTGG	2 cut(s)	54, 758
PfoI	TCCNGGA	1 cut(s)	1578
PkrI	GCNGC	9 cut(s)	22, 25, 28, 696, 1374, 1478, 1594, 1607, 1703
PleI	GAGTC	4 cut(s)	142, 1225, 1465, 1861
PpsI	GAGTC	4 cut(s)	142, 1225, 1465, 1861
Psp6I	CCWGG	2 cut(s)	1017, 1578
PspEI	GGTNACC	1 cut(s)	653
PspGI	CCWGG	2 cut(s)	1017, 1578
PspN4I	GGNNCC	3 cut(s)	400, 1133, 1936
PspOMI	GGGCCC	1 cut(s)	1131
PspPI	GGNCC	4 cut(s)	1131, 1132, 1618, 1714
PsuI	RGATCY	3 cut(s)	818, 1027, 1657
PvuII	CAGCTG	1 cut(s)	26
RsaI	GTAC	3 cut(s)	303, 888, 1741
RsaNI	GTAC	3 cut(s)	302, 887, 1740
RseI	CAYNNNNRTG	6 cut(s)	297, 486, 663, 858, 1991, 2116
SapI	GCTCTTC	1 cut(s)	151
SaqAI	TTAA	6 cut(s)	95, 204, 470, 1125, 1304, 1361
SatI	GCNGC	9 cut(s)	21, 24, 27, 695, 1373, 1477, 1593, 1606, 1702
Sau3AI	GATC	5 cut(s)	818, 1027, 1309, 1657, 1900
Sau96I	GGNCC	4 cut(s)	1131, 1132, 1618, 1714
SchI	GAGTC	4 cut(s)	143, 1226, 1466, 1862
ScrFI	CCNGG	2 cut(s)	1019, 1580
SduI	GDGCHC	4 cut(s)	670, 1135, 1440, 1986
SfaNI	GCATC	3 cut(s)	103, 778, 1801
SfcI	CTRYAG	1 cut(s)	2097
Sfr274I	CTCGAG	1 cut(s)	1955
SinI	GGWCC	2 cut(s)	1618, 1714
SlaI	CTCGAG	1 cut(s)	1955
SmiMI	CAYNNNNRTG	6 cut(s)	297, 486, 663, 858, 1991, 2116
SmlI	CTYRAG	5 cut(s)	122, 1256, 1404, 1586, 1955
SmoI	CTYRAG	5 cut(s)	122, 1256, 1404, 1586, 1955
SpeI	ACTAGT	1 cut(s)	245
SseBI	AGGCCT	1 cut(s)	505
SsiI	CCGC	7 cut(s)	21, 154, 197, 846, 1621, 1717, 1909
SspMI	CTAG	4 cut(s)	246, 1521, 1781, 1808
StuI	AGGCCT	1 cut(s)	505
StyD4I	CCNGG	2 cut(s)	1017, 1578
StyI	CCWWGG	1 cut(s)	1992
TaaI	ACNGT	4 cut(s)	827, 1066, 1444, 1670
TaiI	ACGT	3 cut(s)	210, 999, 1576
TaqI	TCGA	6 cut(s)	68, 681, 1220, 1956, 1998, 2129
TaqII	GACCGA	1 cut(s)	1025
TatI	WGTACW	1 cut(s)	301
TauI	GCSGC	1 cut(s)	23
TfiI	GAWTC	7 cut(s)	678, 739, 1055, 1184, 1631, 1727, 1868
Tru1I	TTAA	6 cut(s)	95, 204, 470, 1125, 1304, 1361
Tru9I	TTAA	6 cut(s)	95, 204, 470, 1125, 1304, 1361
TscAI	CASTG	7 cut(s)	235, 670, 739, 1447, 1492, 1855, 2017
TseFI	GTSAC	4 cut(s)	653, 833, 1095, 1109
TseI	GCWGC	8 cut(s)	23, 26, 694, 1372, 1476, 1592, 1605, 1701
Tsp45I	GTSAC	4 cut(s)	653, 833, 1095, 1109
TspRI	CASTG	7 cut(s)	235, 670, 739, 1447, 1492, 1855, 2017
Van91I	CCANNNNNTGG	2 cut(s)	54, 758
VpaK11BI	GGWCC	2 cut(s)	1618, 1714
XagI	CCTNNNNNAGG	1 cut(s)	894
XapI	RAATTY	3 cut(s)	511, 1365, 1789
XbaI	TCTAGA	1 cut(s)	1807
XceI	RCATGY	2 cut(s)	863, 1896
XhoI	CTCGAG	1 cut(s)	1955
XmiI	GTMKAC	1 cut(s)	330
XspI	CTAG	4 cut(s)	246, 1521, 1781, 1808
Zsp2I	ATGCAT	1 cut(s)	1816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.