Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009177

Physical Location & Seq

Genomic Coordinates Reverse (-)

64847780 .. 64850902

Gene Structure 3123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005078

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGATTTGTGGGTTGTTGCCGCAGCTGCCGGTGCTGGATATTTGACCAAGTATTGGCAGAAACTTTCGAGGGAGAGGGATAAGGATGGCTTGTTAAATGTTTCTTTTGGGGATGCAAATCTTGAGAAACCTGAGTCCCCAAGCTCTTCCCTCCGCAGACACAGGGATAGAAAACCAGTTTCAGGTGAGAGAGTAGCGGATATTAATGTCTGGGGAGGTGTTTCTGACACCGAAGAGGCTTCTACTAGTGGGTATGATGGTGAAAAGCTTGCAAGTCTGGTGAGTTACCAACATTGCAATGTACTTTCTCTATCAAATATATCACCAGTATACCAAGCAAACAAAAATGAGAATGGAGATGAAAGTAGGCAAAGTAATGATTTTGATGACAATACTGGTGCCATGTTACCTAAATCTTCCAATGGAGAAAAGGGTTCTTTTCATGCTCCTCTGAGGAACAGAAGGTCTTTAAGAACTGAACATTCACATGGGCATATTGTTAAGCCTCTAAATTCCTTAGAAAGTTGTCTGATGGCTCAGTTATATAAAGAGCATGCTGAAACAAGTGTCCTTACCCTTCCTTCACCATCCACTCCAAGTATGAGACCATTGATTGTGAGTGATGGAAGCCGAATAATTAGCAGAGCAAATGGTGACCATTTCAGTGCTCAGATTGGAATCGAGGAAAATAAGCTGCATAAGGAAGACCATTTAGAAACAAATGAAAATGCCTCCGGGATTCCTCCACTTCCAAAACTTGGTTGTCTGGATCTCCCAAAGAAGATGAAAATTGAGACAGGAAAGGGGCAGACTGGTAGATCCAACAGTTCCAGTCACACGGCCAGCGGAAAACATTTGCATGTTGAAGGTTCACCAGATGGAGTAGTTCTACTATGTCTTGGGGTTTCTATTGGCATAATATCTTCTTTCATTGCAAATAGAAAGGAAGTTGACAAGTTGAAAGACGTATTGAAGCAGACCGAGAGCTTGGTTGAAGATCTGCATGAAGAACTGGAAATGAAAGATTCAGTAACGGTGAAGGAGCTAACTAATGAGAATTATGGGCCACAGGATACTTGTGACGATTCAGTTTTTAACAGGGCCCTAAATCCTTTTTCTGCTGAACAGAATATGGACAAGTATGATGGTAGAGATTCATATGAGCAGAAAGCTGAGGAGAGTTCAGAGTCAATGAGTAAAATAGAGGCAGAGCTTGAAGCTGAACTTGAGAGGTTGGGGCTAAACATGAATACTTCTACTTTGGAGGGAAGATTAACTGATCTTGATGAGCTTGACCCAGACTTGATGGCAGATTTTGCTCAAGGCGAATTGAGAGCTGAAATGGTTGGTGGGCACACTGTTGCCCAACCCGAGTCAAATGAGAATGCAAGCAGCACCTCCACTGCTCATCACTGTGGAAACTATGCAGTTTCTCCTAGAGAGCTTAGCTTGCGTCTGCATGAAGTTATCCAATCAAGACTGGAGGAACGTATCCAGGAGCTTGAGGCAGCACTACAAAGCAGCCAGGAGAAGGTCCGCATTGTGGAATCAGAGGATAAGGATTGTTTGAGGGATTTCTCAAACAGTTCTGTGCAGTCCACAGTCCAAGATGGTAGCAGCCAGAAGGAGGTCCGCGTTGTGGAACCAGAGCATAAGGATTGTTTGGGGGATCTCTCAAACAGTTCTGTGCAGTCCACAATCCAAGATGGTAGCAGCCAGAAGGAGGTCCGCATTGTGGAATCAGAAGATGGTACTAATTCCAAAGAACAAAGCCAAACCATCATAGAGCCTCTAGTCATGAATTTAGCAGGGGAAGCTCTAGATGCATACAATGAGGCTTACGAAGAGTTGATGAAGCTCAGTGAGTCGGAAGAGGAGGATTCACCTTGTCAAGTTATTGATCAATTCCGAGATCAAATCCGCAATCGAAGTTTTGATGTGAATGGCTCCATTGGGCATTTTGCTTTCGAGGAAGAGAAATGGTTAGGGGATGAGCACATTTCCATGGTTGAGTGTTCTGTCAGTGAGGGGGAGAATAGCAATTCTGATGATGAGATGGAGAAACAACTAATACAGCAGATTGTGGAGAAGACCAAGAAAGGTTCTCCTGTAGTCCTGAATGCACAAAAGTGGTTGTTTTCGATGAATGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

718

Amino Acids

79.36

Weight (kDa)

4.75

Isoelectric Point (pI)

51.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009177)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08010 AT5G61040
fragaria_vesca	FvH4_5g13830 FvH4_5g13830 FvH4_5g13830
malus_domestica	MD14G1212000.v1.1
prunus_persica	Prupe.5G205200_v2.0.a1 Prupe.5G205200_v2.0.a1
pyrus_communis	pycom06g17960 pycom14g17560
rosa_chinensis	RchiOBHm_Chr7g0183101
rosa_laevigata	RLG00000005078
rosa_multiflora	Rmu_ssc0000111.1_g000007
rosa_roxburghii	Rroxscaffold_3G00270760
rosa_rugosa	Rorug06G0453000 Rorug06G0453000 Rorug06G0453100.1
rosa_samantha	Rh7AG056100 Rh7BG055400 Rh7CG056900 Rh7DG055600
rosa_wichuraiana	Rw7G004570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	398
AccB7I	CCANNNNNTGG	2 cut(s)	54, 758
AccI	GTMKAC	1 cut(s)	330
AccII	CGCG	1 cut(s)	1635
AciI	CCGC	8 cut(s)	21, 154, 197, 846, 1537, 1633, 1729, 1921
AclWI	GGATC	3 cut(s)	777, 813, 1677
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	2 cut(s)	511, 1801
AfaI	GTAC	2 cut(s)	303, 1753
AfiI	CCNNNNNNNGG	9 cut(s)	54, 182, 758, 1531, 1543, 1627, 1639, 1723, 1735
AgsI	TTSAA	5 cut(s)	866, 961, 973, 995, 1217
AhlI	ACTAGT	1 cut(s)	245
AjnI	CCWGG	2 cut(s)	1494, 1524
AleI	CACNNNNGTG	1 cut(s)	2128
Alw21I	GWGCWC	2 cut(s)	670, 1998
Alw26I	GTCTC	2 cut(s)	598, 788
AlwI	GGATC	3 cut(s)	777, 813, 1677
Ama87I	CYCGRG	1 cut(s)	1370
AoxI	GGCC	3 cut(s)	840, 1064, 1101
ApaI	GGGCCC	1 cut(s)	1105
ApeKI	GCWGC	8 cut(s)	23, 26, 694, 1392, 1508, 1521, 1617, 1713
ApoI	RAATTY	2 cut(s)	511, 1801
AseI	ATTAAT	1 cut(s)	204
AspS9I	GGNCC	6 cut(s)	1064, 1101, 1102, 1534, 1630, 1726
AsuC2I	CCSGG	1 cut(s)	736
AsuHPI	GGTGA	9 cut(s)	197, 272, 292, 315, 576, 665, 864, 1048, 1875
AvaI	CYCGRG	1 cut(s)	1370
AvaII	GGWCC	3 cut(s)	1534, 1630, 1726
BaeGI	GKGCMC	2 cut(s)	1105, 1356
BanI	GGYRCC	1 cut(s)	398
BanII	GRGCYC	1 cut(s)	1105
BbsI	GAAGAC	2 cut(s)	711, 2096
Bbv12I	GWGCWC	2 cut(s)	670, 1998
BbvCI	CCTCAGC	1 cut(s)	1173
BbvI	GCAGC	8 cut(s)	13, 35, 681, 1404, 1520, 1533, 1629, 1725
BceAI	ACGGC	1 cut(s)	855
BciT130I	CCWGG	2 cut(s)	1496, 1526
BciVI	GTATCC	2 cut(s)	1066, 1502
BclI	TGATCA	1 cut(s)	1900
BcnI	CCSGG	1 cut(s)	736
BcoDI	GTCTC	2 cut(s)	598, 788
BcuI	ACTAGT	1 cut(s)	245
BfaI	CTAG	4 cut(s)	246, 1437, 1793, 1820
BfmI	CTRYAG	1 cut(s)	2109
BfuI	GTATCC	2 cut(s)	1066, 1502
BglII	AGATCT	1 cut(s)	997
BisI	GCNGC	9 cut(s)	21, 24, 27, 695, 1393, 1509, 1522, 1618, 1714
BlpI	GCTNAGC	1 cut(s)	1445
BlsI	GCNGC	9 cut(s)	22, 25, 28, 696, 1394, 1510, 1523, 1619, 1715
Bme1390I	CCNGG	3 cut(s)	736, 1496, 1526
Bme18I	GGWCC	3 cut(s)	1534, 1630, 1726
BmeT110I	CYCGRG	1 cut(s)	1370
BmgT120I	GGNCC	6 cut(s)	1064, 1101, 1102, 1534, 1630, 1726
BmiI	GGNNCC	4 cut(s)	400, 1103, 1644, 1948
BmrFI	CCNGG	3 cut(s)	736, 1496, 1526
BmsI	GCATC	2 cut(s)	103, 1813
BpiI	GAAGAC	2 cut(s)	711, 2096
BpmI	CTGGAG	1 cut(s)	1502
Bpu10I	CCTNAGC	1 cut(s)	1173
Bpu1102I	GCTNAGC	1 cut(s)	1445
BpuEI	CTTGAG	4 cut(s)	143, 1247, 1305, 1523
BpuMI	CCSGG	1 cut(s)	736
BsaBI	GATNNNNATC	2 cut(s)	117, 677
BsaI	GGTCTC	1 cut(s)	598
BsaJI	CCNNGG	1 cut(s)	2004
Bsc4I	CCNNNNNNNGG	9 cut(s)	54, 182, 758, 1531, 1543, 1627, 1639, 1723, 1735
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	7 cut(s)	176, 326, 400, 817, 831, 1017, 1485
Bse3DI	GCAATG	3 cut(s)	292, 304, 930
Bse8I	GATNNNNATC	2 cut(s)	117, 677
BseBI	CCWGG	2 cut(s)	1496, 1526
BseDI	CCNNGG	1 cut(s)	2004
BseGI	GGATG	4 cut(s)	91, 118, 587, 1996
BseJI	GATNNNNATC	2 cut(s)	117, 677
BseLI	CCNNNNNNNGG	9 cut(s)	54, 182, 758, 1531, 1543, 1627, 1639, 1723, 1735
BseMI	GCAATG	3 cut(s)	292, 304, 930
BseMII	CTCAG	6 cut(s)	123, 443, 551, 683, 1164, 1873
BseNI	ACTGG	7 cut(s)	176, 326, 400, 817, 831, 1017, 1485
BseRI	GAGGAG	3 cut(s)	438, 1190, 1889
BseSI	GKGCMC	2 cut(s)	1105, 1356
BseXI	GCAGC	8 cut(s)	13, 35, 681, 1404, 1520, 1533, 1629, 1725
BsgI	GTGCAG	2 cut(s)	1613, 1709
Bsh1236I	CGCG	1 cut(s)	1635
BshFI	GGCC	3 cut(s)	842, 1066, 1103
BshNI	GGYRCC	1 cut(s)	398
BsiHKAI	GWGCWC	2 cut(s)	670, 1998
BsiHKCI	CYCGRG	1 cut(s)	1370
BsiSI	CCGG	2 cut(s)	30, 735
BslFI	GGGAC	1 cut(s)	121
BslI	CCNNNNNNNGG	9 cut(s)	54, 182, 758, 1531, 1543, 1627, 1639, 1723, 1735
BsmAI	GTCTC	2 cut(s)	598, 788
BsmFI	GGGAC	1 cut(s)	121
BsmI	GAATGC	2 cut(s)	1390, 2125
BsnI	GGCC	3 cut(s)	842, 1066, 1103
Bso31I	GGTCTC	1 cut(s)	598
BsoBI	CYCGRG	1 cut(s)	1370
Bsp120I	GGGCCC	1 cut(s)	1101
Bsp1286I	GDGCHC	4 cut(s)	670, 1105, 1356, 1998
Bsp143I	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
Bsp1720I	GCTNAGC	1 cut(s)	1445
Bsp19I	CCATGG	1 cut(s)	2004
BspACI	CCGC	8 cut(s)	21, 154, 197, 846, 1537, 1633, 1729, 1921
BspANI	GGCC	3 cut(s)	842, 1066, 1103
BspCNI	CTCAG	6 cut(s)	124, 444, 550, 682, 1165, 1872
BspFNI	CGCG	1 cut(s)	1635
BspHI	TCATGA	1 cut(s)	1797
BspLI	GGNNCC	4 cut(s)	400, 1103, 1644, 1948
BspPI	GGATC	3 cut(s)	777, 813, 1677
BspQI	GCTCTTC	1 cut(s)	151
BspT107I	GGYRCC	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	598
BsrDI	GCAATG	3 cut(s)	292, 304, 930
BsrFI	RCCGGY	1 cut(s)	29
BsrI	ACTGG	7 cut(s)	176, 326, 400, 817, 831, 1017, 1485
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	1 cut(s)	2004
BssMI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
BssNAI	GTATAC	1 cut(s)	331
BssT1I	CCWWGG	1 cut(s)	2004
Bst1107I	GTATAC	1 cut(s)	331
Bst2UI	CCWGG	2 cut(s)	1496, 1526
Bst4CI	ACNGT	7 cut(s)	827, 1036, 1360, 1415, 1586, 1603, 1682
Bst6I	CTCTTC	5 cut(s)	151, 228, 1839, 1866, 1968
BstAPI	GCANNNNNTGC	1 cut(s)	1316
BstC8I	GCNNGC	5 cut(s)	270, 555, 844, 1390, 1451
BstDEI	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1173, 1445, 1859
BstDSI	CCRYGG	1 cut(s)	2004
BstEII	GGTNACC	1 cut(s)	653
BstF5I	GGATG	4 cut(s)	91, 118, 587, 1996
BstFNI	CGCG	1 cut(s)	1635
BstKTI	GATC	7 cut(s)	772, 821, 1000, 1282, 1672, 1903, 1915
BstMAI	GTCTC	2 cut(s)	598, 788
BstMBI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
BstMWI	GCNNNNNNNGC	6 cut(s)	26, 32, 1316, 1450, 1814, 1823
BstNI	CCWGG	2 cut(s)	1496, 1526
BstNSI	RCATGY	2 cut(s)	557, 863
BstPI	GGTNACC	1 cut(s)	653
BstSCI	CCNGG	3 cut(s)	734, 1494, 1524
BstSFI	CTRYAG	1 cut(s)	2109
BstSLI	GKGCMC	2 cut(s)	1105, 1356
BstUI	CGCG	1 cut(s)	1635
BstV1I	GCAGC	8 cut(s)	13, 35, 681, 1404, 1520, 1533, 1629, 1725
BstV2I	GAAGAC	2 cut(s)	711, 2096
BstX2I	RGATCY	4 cut(s)	769, 818, 997, 1669
BstYI	RGATCY	4 cut(s)	769, 818, 997, 1669
BstZ17I	GTATAC	1 cut(s)	331
BsuI	GTATCC	2 cut(s)	1066, 1502
BsuRI	GGCC	3 cut(s)	842, 1066, 1103
BtgI	CCRYGG	1 cut(s)	2004
BtsCI	GGATG	4 cut(s)	91, 118, 587, 1996
BtsI	GCAGTG	1 cut(s)	1401
BtsIMutI	CAGTG	6 cut(s)	670, 1356, 1401, 1411, 1867, 2029
Cac8I	GCNNGC	5 cut(s)	270, 555, 844, 1390, 1451
CciI	TCATGA	1 cut(s)	1797
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	6 cut(s)	1064, 1101, 1102, 1534, 1630, 1726
CseI	GACGC	1 cut(s)	1442
Csp6I	GTAC	2 cut(s)	302, 1752
CviQI	GTAC	2 cut(s)	302, 1752
DdeI	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1173, 1445, 1859
DpnI	GATC	7 cut(s)	771, 820, 999, 1281, 1671, 1902, 1914
DpnII	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	5 cut(s)	151, 228, 1839, 1866, 1968
EarI	CTCTTC	5 cut(s)	151, 228, 1839, 1866, 1968
Eco130I	CCWWGG	1 cut(s)	2004
Eco24I	GRGCYC	1 cut(s)	1105
Eco31I	GGTCTC	1 cut(s)	598
Eco47I	GGWCC	3 cut(s)	1534, 1630, 1726
Eco88I	CYCGRG	1 cut(s)	1370
Eco91I	GGTNACC	1 cut(s)	653
EcoO109I	RGGNCCY	2 cut(s)	1101, 1102
EcoO65I	GGTNACC	1 cut(s)	653
EcoRII	CCWGG	2 cut(s)	1494, 1524
EcoT14I	CCWWGG	1 cut(s)	2004
EcoT22I	ATGCAT	1 cut(s)	1828
EcoT38I	GRGCYC	1 cut(s)	1105
ErhI	CCWWGG	1 cut(s)	2004
FalI	AAGNNNNNCTT	4 cut(s)	74, 106, 1209, 1241
FaqI	GGGAC	1 cut(s)	121
FauNDI	CATATG	1 cut(s)	1159
FbaI	TGATCA	1 cut(s)	1900
FblI	GTMKAC	1 cut(s)	330
Fnu4HI	GCNGC	9 cut(s)	21, 24, 27, 695, 1393, 1509, 1522, 1618, 1714
FokI	GGATG	4 cut(s)	98, 125, 574, 2003
FriOI	GRGCYC	1 cut(s)	1105
Fsp4HI	GCNGC	9 cut(s)	21, 24, 27, 695, 1393, 1509, 1522, 1618, 1714
FspBI	CTAG	4 cut(s)	246, 1437, 1793, 1820
GluI	GCNGC	9 cut(s)	21, 24, 27, 695, 1393, 1509, 1522, 1618, 1714
GsuI	CTGGAG	1 cut(s)	1502
HaeIII	GGCC	3 cut(s)	842, 1066, 1103
HapII	CCGG	2 cut(s)	30, 735
HgaI	GACGC	1 cut(s)	1442
HincII	GTYRAC	1 cut(s)	952
HindII	GTYRAC	1 cut(s)	952
HindIII	AAGCTT	1 cut(s)	266
HpaII	CCGG	2 cut(s)	30, 735
HphI	GGTGA	9 cut(s)	197, 272, 292, 315, 576, 665, 864, 1048, 1875
Hpy166II	GTNNAC	5 cut(s)	331, 872, 952, 1599, 1695
Hpy188III	TCNNGA	7 cut(s)	122, 767, 1283, 1476, 1798, 1820, 2116
Hpy8I	GTNNAC	5 cut(s)	331, 872, 952, 1599, 1695
HpyAV	CCTTC	8 cut(s)	456, 587, 591, 860, 1033, 1525, 1618, 1714
HpyCH4III	ACNGT	7 cut(s)	827, 1036, 1360, 1415, 1586, 1603, 1682
HpyCH4IV	ACGT	2 cut(s)	966, 1489
HpyF10VI	GCNNNNNNNGC	6 cut(s)	26, 32, 1316, 1450, 1814, 1823
HpyF3I	CTNAG	8 cut(s)	132, 452, 517, 537, 669, 1173, 1445, 1859
HpySE526I	ACGT	2 cut(s)	966, 1489
Ksp22I	TGATCA	1 cut(s)	1900
Kzo9I	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
LguI	GCTCTTC	1 cut(s)	151
LmnI	GCTCC	4 cut(s)	451, 1042, 1498, 1952
Lsp1109I	GCAGC	8 cut(s)	13, 35, 681, 1404, 1520, 1533, 1629, 1725
LweI	GCATC	2 cut(s)	103, 1813
MaeI	CTAG	4 cut(s)	246, 1437, 1793, 1820
MaeII	ACGT	2 cut(s)	966, 1489
MaeIII	GTNAC	6 cut(s)	284, 405, 653, 833, 1030, 1079
MalI	GATC	7 cut(s)	771, 820, 999, 1281, 1671, 1902, 1914
MboI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
MflI	RGATCY	4 cut(s)	769, 818, 997, 1669
MhlI	GDGCHC	4 cut(s)	670, 1105, 1356, 1998
MluCI	AATT	9 cut(s)	511, 636, 789, 1057, 1328, 1756, 1801, 1904, 2041
MlyI	GAGTC	4 cut(s)	143, 1196, 1382, 1874
MmeI	TCCRAC	2 cut(s)	846, 1848
Mph1103I	ATGCAT	1 cut(s)	1828
MseI	TTAA	7 cut(s)	95, 204, 470, 501, 1095, 1274, 2152
MslI	CAYNNNNRTG	7 cut(s)	297, 486, 663, 858, 1413, 2003, 2128
MspA1I	CMGCKG	2 cut(s)	26, 846
MspI	CCGG	2 cut(s)	30, 735
MspR9I	CCNGG	3 cut(s)	736, 1496, 1526
Mva1269I	GAATGC	2 cut(s)	1390, 2125
MvaI	CCWGG	2 cut(s)	1496, 1526
MvnI	CGCG	1 cut(s)	1635
MwoI	GCNNNNNNNGC	6 cut(s)	26, 32, 1316, 1450, 1814, 1823
NciI	CCSGG	1 cut(s)	736
NcoI	CCATGG	1 cut(s)	2004
NdeI	CATATG	1 cut(s)	1159
NdeII	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
NlaIV	GGNNCC	4 cut(s)	400, 1103, 1644, 1948
NmuCI	GTSAC	3 cut(s)	653, 833, 1079
NsiI	ATGCAT	1 cut(s)	1828
NspI	RCATGY	2 cut(s)	557, 863
OliI	CACNNNNGTG	1 cut(s)	2128
PaeI	GCATGC	1 cut(s)	557
PagI	TCATGA	1 cut(s)	1797
PciSI	GCTCTTC	1 cut(s)	151
PctI	GAATGC	2 cut(s)	1390, 2125
PfeI	GAWTC	8 cut(s)	678, 739, 1025, 1085, 1154, 1547, 1739, 1880
PflMI	CCANNNNNTGG	2 cut(s)	54, 758
PfoI	TCCNGGA	2 cut(s)	734, 1494
PkrI	GCNGC	9 cut(s)	22, 25, 28, 696, 1394, 1510, 1523, 1619, 1715
PleI	GAGTC	4 cut(s)	142, 1195, 1381, 1873
PpsI	GAGTC	4 cut(s)	142, 1195, 1381, 1873
PshBI	ATTAAT	1 cut(s)	204
Psp6I	CCWGG	2 cut(s)	1494, 1524
PspEI	GGTNACC	1 cut(s)	653
PspGI	CCWGG	2 cut(s)	1494, 1524
PspN4I	GGNNCC	4 cut(s)	400, 1103, 1644, 1948
PspOMI	GGGCCC	1 cut(s)	1101
PspPI	GGNCC	6 cut(s)	1064, 1101, 1102, 1534, 1630, 1726
PsuI	RGATCY	4 cut(s)	769, 818, 997, 1669
PvuII	CAGCTG	1 cut(s)	26
RsaI	GTAC	2 cut(s)	303, 1753
RsaNI	GTAC	2 cut(s)	302, 1752
RseI	CAYNNNNRTG	7 cut(s)	297, 486, 663, 858, 1413, 2003, 2128
SapI	GCTCTTC	1 cut(s)	151
SaqAI	TTAA	7 cut(s)	95, 204, 470, 501, 1095, 1274, 2152
SatI	GCNGC	9 cut(s)	21, 24, 27, 695, 1393, 1509, 1522, 1618, 1714
Sau3AI	GATC	7 cut(s)	769, 818, 997, 1279, 1669, 1900, 1912
Sau96I	GGNCC	6 cut(s)	1064, 1101, 1102, 1534, 1630, 1726
SchI	GAGTC	4 cut(s)	143, 1196, 1382, 1874
ScrFI	CCNGG	3 cut(s)	736, 1496, 1526
SduI	GDGCHC	4 cut(s)	670, 1105, 1356, 1998
SfaNI	GCATC	2 cut(s)	103, 1813
SfcI	CTRYAG	1 cut(s)	2109
SinI	GGWCC	3 cut(s)	1534, 1630, 1726
SmiMI	CAYNNNNRTG	7 cut(s)	297, 486, 663, 858, 1413, 2003, 2128
SmlI	CTYRAG	4 cut(s)	122, 1226, 1320, 1502
SmoI	CTYRAG	4 cut(s)	122, 1226, 1320, 1502
SpeI	ACTAGT	1 cut(s)	245
SphI	GCATGC	1 cut(s)	557
Sse9I	AATT	9 cut(s)	511, 636, 789, 1057, 1328, 1756, 1801, 1904, 2041
SsiI	CCGC	8 cut(s)	21, 154, 197, 846, 1537, 1633, 1729, 1921
SspMI	CTAG	4 cut(s)	246, 1437, 1793, 1820
StyD4I	CCNGG	3 cut(s)	734, 1494, 1524
StyI	CCWWGG	1 cut(s)	2004
TaaI	ACNGT	7 cut(s)	827, 1036, 1360, 1415, 1586, 1603, 1682
TaiI	ACGT	2 cut(s)	969, 1492
TaqI	TCGA	5 cut(s)	68, 681, 1927, 1968, 2141
TaqII	GACCGA	1 cut(s)	995
TasI	AATT	9 cut(s)	511, 636, 789, 1057, 1328, 1756, 1801, 1904, 2041
TatI	WGTACW	1 cut(s)	301
TauI	GCSGC	1 cut(s)	23
TfiI	GAWTC	8 cut(s)	678, 739, 1025, 1085, 1154, 1547, 1739, 1880
Tru1I	TTAA	7 cut(s)	95, 204, 470, 501, 1095, 1274, 2152
Tru9I	TTAA	7 cut(s)	95, 204, 470, 501, 1095, 1274, 2152
TscAI	CASTG	6 cut(s)	670, 1363, 1408, 1418, 1867, 2029
TseFI	GTSAC	3 cut(s)	653, 833, 1079
TseI	GCWGC	8 cut(s)	23, 26, 694, 1392, 1508, 1521, 1617, 1713
Tsp45I	GTSAC	3 cut(s)	653, 833, 1079
TspRI	CASTG	6 cut(s)	670, 1363, 1408, 1418, 1867, 2029
Van91I	CCANNNNNTGG	2 cut(s)	54, 758
VpaK11BI	GGWCC	3 cut(s)	1534, 1630, 1726
VspI	ATTAAT	1 cut(s)	204
XapI	RAATTY	2 cut(s)	511, 1801
XbaI	TCTAGA	1 cut(s)	1819
XceI	RCATGY	2 cut(s)	557, 863
XmiI	GTMKAC	1 cut(s)	330
XspI	CTAG	4 cut(s)	246, 1437, 1793, 1820
Zsp2I	ATGCAT	1 cut(s)	1828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.