AT5G61150

Leo1-like protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24603634 .. 24607725
4092 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61150.1

Sequence Viewer

Length: 1878 bp
ATGGTTAAAGGAGAAAAGAGATCCGAGATGATGCTTAATCTGTTCGGAGATAATTCCGAGGAAGAAGAGATCGAATCCGAACATGAATGCAATCGTCGTCAGCCTAACTACGCTTCCGATGAGGCTGAGGGCGGGGTGGAGCCTGAAGGAGAAGGTGAAGCTGAGGTTGAAGTTCACGGAGAAGCTGAAGCTGAGTCTGACGGGGAACAGGGAGATGTAGAACTTGATCCTGGAGAAAGTGAGGGTGAGAGGGAGCAAAGTTCACAGGAGGCTGATCCACAAGAGGAAAGTGAAGCAAGAGATAGTGATAGTGATAACAAAGAAGAAGAACATGGGGGTAGAGTAGCCAAAAAGAGGAGACAGGAGGTTGTTGAGAGCGGATCAGAGAGGTCTGGTGAAAAGCATTATGAGTCTGAAGATGAAGAGGTTGATCAGACTAGGAGTCCAAGATCACCTAGTGAGGAGAAGGAAGAGGTTCAAGTTGCACAGTCAGACGTAAATATTCGTAATGTTTTCGGATCTTCGGATGATGAAGACGCAGAAGAATATGTTCGGAATGACGTTGAGCAGGATGAACATAGATCGCCAATCGAAGATGAAGAGGGCTCTGAGAAGGATCTGAGACCCGATGATATGGTGCTTGATGATATAATCCCTGAAGAAGATCCTCAATACGAGTCAGAAGCTGAACATGTTGAAGCTAGGTACAGGGAGAGGCCAGTTGGTCCCCCTTTGGAAGTGGAGGTTCCTTTCCGCCCTCCTCCAGGTGACCCCGTTAAGATGAACATGATAAAAGTTTCCAATATCATGGGGATTGATCCAAAGCCTTTTGATGCCAAAACATTCGTTGAAGAAGACACATTCATGACAGATGAACCCGGAGCAAAGAATCGTATCCGTTTGGACAATAATATTGTTCGCCATAGGTTTGTTAAGAGTCGAGATGGCAAAACATATAGTGAAAGTAATGCTCGGTTTGTAAGGTGGTCAGATGGAAGCTTACAGCTATTGATAGGAAACGAAGTTCTTAACATAACTGAACAAGATGCAAAAGAAGACCAGAATCACCTCTTTATCAAACATGAAAAGGGTATCCTTCAATCACAAGGAAGAATTTTGAAGAAAATGAGATTTACCCCATCATCGCTGACGTCAAATTCCCATAGGCTCTTGACTGCCATTGTTGAATCGAGGCAGAAGAAGGCCTTCAAAGTTAAGAACTGTGTCACTGACATTGACCCTGAGAGGGAGAAGGAGAAGAGAGAAAAGGCGGAAAGCCAAAACCTCAAGGCTAGTACAAAGCTGAGTCAGGCGAGGGAGAAAATCAAGCGCAAGTATCCACTTCCTGTTGAAAGGAGACAACTTTCCACTGGCTACTTGGAAGATGCTCTTGATGAGGATGACGAGGATTACCGCTCAAACCGTGGCTATGAGGAAGATCTCGAAGCTGAAGCGCAACGGGAACGCCGGATTCTAAACGCCAAGAAGAGCCACAAAGGCATTCCGGGGAGGTCTTCAATGACTTCGGCCAGACCGTCAAGACGTCAAATGGAGTATTCTGAGAGTGAGAGAGAGGAATCAGAATATGAGACGGAAGAAGAAGAGGAAGAAAAGTCACCGGCCCGTGGAAGGGGCAAGGATTCAGAAGATGAATATGAGGAAGATGCAGAAGAAGATGAAGAGGAACGAGGAAAATCTAACAGATACTCAGATGAAGATGAAGAAGAGGAAGAGGTTGCGGGAGGTAGGGCAGAGAAGGATCACCGTGGAAGTGGCCGGAAAAGGAAAGGGATTGAGTCTGACGAGGAGGAGTCTCCGCCTAGAAAAGCTCCGACTCATCGTCGTAAGGCCGTGATTGATGACAGTGACGAAGATTAA

Protein Analysis

625

Amino Acids

71.76

Weight (kDa)

4.6

Isoelectric Point (pI)

79.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Leo1 PF04004 263 - 422 1.1e-44 Leo1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1154, 1546
AccBSI CCGCTC 2 cut(s) 378, 1416
AciI CCGC 7 cut(s) 132, 378, 754, 1271, 1414, 1739, 1817
AclWI GGATC 9 cut(s) 15, 221, 269, 388, 526, 624, 659, 812, 1767
AcoI YGGCCR 2 cut(s) 1527, 1774
AcsI RAATTY 2 cut(s) 1113, 1156
AcuI CTGAAG 5 cut(s) 165, 207, 435, 678, 1470
AcyI GRCGYC 2 cut(s) 1151, 1543
AdeI CACNNNGTG 1 cut(s) 458
AfaI GTAC 2 cut(s) 707, 1297
AfiI CCNNNNNNNGG 6 cut(s) 354, 764, 1246, 1625, 1629, 1630
AflIII ACRYGT 1 cut(s) 691
AhdI GACNNNNNGTC 2 cut(s) 441, 1839
AjnI CCWGG 2 cut(s) 229, 763
AloI GAACNNNNNNTCC 2 cut(s) 1008, 1040
Alw26I GTCTC 5 cut(s) 352, 616, 1351, 1583, 1818
AlwI GGATC 9 cut(s) 15, 221, 269, 388, 526, 624, 659, 812, 1767
AlwNI CAGNNNCTG 1 cut(s) 686
AoxI GGCC 6 cut(s) 716, 1203, 1527, 1620, 1774, 1848
ApoI RAATTY 2 cut(s) 1113, 1156
Asp700I GAANNNNTTC 3 cut(s) 474, 549, 1205
AspLEI GCGC 2 cut(s) 1332, 1456
AspS9I GGNCC 2 cut(s) 725, 1621
AsuC2I CCSGG 2 cut(s) 879, 1506
AsuHPI GGTGA 8 cut(s) 167, 257, 407, 444, 779, 1058, 1608, 1754
AvaII GGWCC 1 cut(s) 725
BanII GRGCYC 1 cut(s) 608
BbsI GAAGAC 4 cut(s) 540, 861, 1062, 1506
BbvCI CCTCAGC 2 cut(s) 126, 162
BccI CCATC 3 cut(s) 938, 986, 1147
BceAI ACGGC 1 cut(s) 1835
BciT130I CCWGG 2 cut(s) 231, 765
BciVI GTATCC 3 cut(s) 905, 1103, 1347
BclI TGATCA 1 cut(s) 430
BcnI CCSGG 2 cut(s) 879, 1506
BcoDI GTCTC 5 cut(s) 352, 616, 1351, 1583, 1818
BfaI CTAG 5 cut(s) 438, 456, 702, 1293, 1821
BfuI GTATCC 3 cut(s) 905, 1103, 1347
BglI GCCNNNNNGGC 1 cut(s) 1497
BglII AGATCT 1 cut(s) 1438
Bme1390I CCNGG 4 cut(s) 231, 765, 879, 1506
Bme18I GGWCC 1 cut(s) 725
BmeRI GACNNNNNGTC 2 cut(s) 441, 1839
BmgT120I GGNCC 2 cut(s) 725, 1621
BmiI GGNNCC 3 cut(s) 141, 727, 747
BmrFI CCNGG 4 cut(s) 231, 765, 879, 1506
BmsI GCATC 5 cut(s) 21, 823, 1036, 1375, 1654
BpiI GAAGAC 4 cut(s) 540, 861, 1062, 1506
BpmI CTGGAG 2 cut(s) 252, 747
Bpu10I CCTNAGC 2 cut(s) 126, 162
BpuEI CTTGAG 1 cut(s) 1271
BpuMI CCSGG 2 cut(s) 879, 1506
BsaHI GRCGYC 2 cut(s) 1151, 1543
BsaI GGTCTC 1 cut(s) 616
BsaJI CCNNGG 5 cut(s) 57, 1423, 1505, 1624, 1765
Bsc4I CCNNNNNNNGG 6 cut(s) 354, 764, 1246, 1625, 1629, 1630
Bse118I RCCGGY 1 cut(s) 1618
Bse1I ACTGG 2 cut(s) 719, 1375
BseBI CCWGG 2 cut(s) 231, 765
BseDI CCNNGG 5 cut(s) 57, 1423, 1505, 1624, 1765
BseGI GGATG 3 cut(s) 532, 577, 1405
BseLI CCNNNNNNNGG 6 cut(s) 354, 764, 1246, 1625, 1629, 1630
BseMII CTCAG 9 cut(s) 117, 153, 183, 600, 611, 1233, 1295, 1551, 1722
BseNI ACTGG 2 cut(s) 719, 1375
BseRI GAGGAG 5 cut(s) 370, 476, 750, 1820, 1823
BshFI GGCC 6 cut(s) 718, 1205, 1529, 1622, 1776, 1850
BsiSI CCGG 5 cut(s) 879, 1468, 1505, 1619, 1777
BslFI GGGAC 1 cut(s) 711
BslI CCNNNNNNNGG 6 cut(s) 354, 764, 1246, 1625, 1629, 1630
BsmAI GTCTC 5 cut(s) 352, 616, 1351, 1583, 1818
BsmBI CGTCTC 1 cut(s) 1583
BsmFI GGGAC 1 cut(s) 711
BsmI GAATGC 2 cut(s) 92, 1500
BsnI GGCC 6 cut(s) 718, 1205, 1529, 1622, 1776, 1850
Bso31I GGTCTC 1 cut(s) 616
Bsp1286I GDGCHC 1 cut(s) 608
BspACI CCGC 7 cut(s) 132, 378, 754, 1271, 1414, 1739, 1817
BspANI GGCC 6 cut(s) 718, 1205, 1529, 1622, 1776, 1850
BspCNI CTCAG 9 cut(s) 118, 154, 184, 601, 612, 1234, 1296, 1552, 1721
BspHI TCATGA 1 cut(s) 864
BspLI GGNNCC 3 cut(s) 141, 727, 747
BspPI GGATC 9 cut(s) 15, 221, 269, 388, 526, 624, 659, 812, 1767
BspQI GCTCTTC 1 cut(s) 1481
BspTNI GGTCTC 1 cut(s) 616
BsrBI CCGCTC 2 cut(s) 378, 1416
BsrFI RCCGGY 1 cut(s) 1618
BsrI ACTGG 2 cut(s) 719, 1375
BssAI RCCGGY 1 cut(s) 1618
BssECI CCNNGG 5 cut(s) 57, 1423, 1505, 1624, 1765
BssNI GRCGYC 2 cut(s) 1151, 1543
Bst2UI CCWGG 2 cut(s) 231, 765
Bst4CI ACNGT 6 cut(s) 489, 1223, 1424, 1536, 1766, 1865
BstACI GRCGYC 2 cut(s) 1151, 1543
BstDEI CTNAG 9 cut(s) 126, 162, 192, 609, 620, 1242, 1304, 1560, 1708
BstDSI CCRYGG 3 cut(s) 1423, 1624, 1765
BstEII GGTNACC 1 cut(s) 767
BstENI CCTNNNNNAGG 1 cut(s) 762
BstF5I GGATG 3 cut(s) 532, 577, 1405
BstHHI GCGC 2 cut(s) 1332, 1456
BstMAI GTCTC 5 cut(s) 352, 616, 1351, 1583, 1818
BstMWI GCNNNNNNNGC 1 cut(s) 1497
BstNI CCWGG 2 cut(s) 231, 765
BstNSI RCATGY 1 cut(s) 695
BstPI GGTNACC 1 cut(s) 767
BstSCI CCNGG 4 cut(s) 229, 763, 877, 1504
BstV2I GAAGAC 4 cut(s) 540, 861, 1062, 1506
BstX2I RGATCY 5 cut(s) 20, 518, 616, 664, 1438
BstXI CCANNNNNNTGG 1 cut(s) 808
BstYI RGATCY 5 cut(s) 20, 518, 616, 664, 1438
BsuI GTATCC 3 cut(s) 905, 1103, 1347
BsuRI GGCC 6 cut(s) 718, 1205, 1529, 1622, 1776, 1850
BtgI CCRYGG 3 cut(s) 1423, 1624, 1765
BtgZI GCGATG 1 cut(s) 1128
BtsCI GGATG 3 cut(s) 532, 577, 1405
BtsIMutI CAGTG 3 cut(s) 1227, 1368, 1870
CaiI CAGNNNCTG 1 cut(s) 686
CciI TCATGA 1 cut(s) 864
CfoI GCGC 2 cut(s) 1332, 1456
Cfr10I RCCGGY 1 cut(s) 1618
Cfr13I GGNCC 2 cut(s) 725, 1621
CseI GACGC 1 cut(s) 545
Csp6I GTAC 2 cut(s) 706, 1296
CviAII CATG 7 cut(s) 83, 332, 692, 787, 808, 865, 1082
CviQI GTAC 2 cut(s) 706, 1296
DdeI CTNAG 9 cut(s) 126, 162, 192, 609, 620, 1242, 1304, 1560, 1708
DraIII CACNNNGTG 1 cut(s) 458
DriI GACNNNNNGTC 2 cut(s) 441, 1839
EaeI YGGCCR 2 cut(s) 1527, 1774
Eam1105I GACNNNNNGTC 2 cut(s) 441, 1839
EciI GGCGGA 3 cut(s) 743, 1286, 1806
Eco147I AGGCCT 1 cut(s) 1205
Eco24I GRGCYC 1 cut(s) 608
Eco31I GGTCTC 1 cut(s) 616
Eco47I GGWCC 1 cut(s) 725
Eco57I CTGAAG 5 cut(s) 165, 207, 435, 678, 1470
Eco91I GGTNACC 1 cut(s) 767
EcoNI CCTNNNNNAGG 1 cut(s) 762
EcoO65I GGTNACC 1 cut(s) 767
EcoRII CCWGG 2 cut(s) 229, 763
EcoT38I GRGCYC 1 cut(s) 608
Esp3I CGTCTC 1 cut(s) 1583
FaeI CATG 7 cut(s) 86, 335, 695, 790, 811, 868, 1085
FalI AAGNNNNNCTT 4 cut(s) 1190, 1222, 1374, 1406
FaqI GGGAC 1 cut(s) 711
FatI CATG 7 cut(s) 82, 331, 691, 786, 807, 864, 1081
FauI CCCGC 2 cut(s) 125, 1732
FbaI TGATCA 1 cut(s) 430
FokI GGATG 3 cut(s) 539, 584, 1412
FriOI GRGCYC 1 cut(s) 608
FspBI CTAG 5 cut(s) 438, 456, 702, 1293, 1821
GlaI GCGC 2 cut(s) 1331, 1455
GsuI CTGGAG 2 cut(s) 252, 747
HaeIII GGCC 6 cut(s) 718, 1205, 1529, 1622, 1776, 1850
HapII CCGG 5 cut(s) 879, 1468, 1505, 1619, 1777
HgaI GACGC 1 cut(s) 545
HhaI GCGC 2 cut(s) 1332, 1456
Hin1I GRCGYC 2 cut(s) 1151, 1543
Hin1II CATG 7 cut(s) 86, 335, 695, 790, 811, 868, 1085
Hin6I GCGC 2 cut(s) 1330, 1454
HinP1I GCGC 2 cut(s) 1330, 1454
HindIII AAGCTT 1 cut(s) 997
HpaII CCGG 5 cut(s) 879, 1468, 1505, 1619, 1777
HphI GGTGA 8 cut(s) 167, 257, 407, 444, 779, 1058, 1608, 1754
Hpy166II GTNNAC 2 cut(s) 175, 263
Hpy188III TCNNGA 6 cut(s) 865, 941, 1171, 1391, 1442, 1539
Hpy8I GTNNAC 2 cut(s) 175, 263
Hpy99I CGWCG 2 cut(s) 99, 1845
HpyCH4III ACNGT 6 cut(s) 489, 1223, 1424, 1536, 1766, 1865
HpyCH4IV ACGT 4 cut(s) 495, 561, 1151, 1543
HpyCH4V TGCA 4 cut(s) 90, 485, 1049, 1667
HpyF10VI GCNNNNNNNGC 1 cut(s) 1497
HpyF3I CTNAG 9 cut(s) 126, 162, 192, 609, 620, 1242, 1304, 1560, 1708
HpySE526I ACGT 4 cut(s) 495, 561, 1151, 1543
Hsp92I GRCGYC 2 cut(s) 1151, 1543
Hsp92II CATG 7 cut(s) 86, 335, 695, 790, 811, 868, 1085
HspAI GCGC 2 cut(s) 1330, 1454
Ksp22I TGATCA 1 cut(s) 430
LguI GCTCTTC 1 cut(s) 1481
LmnI GCTCC 4 cut(s) 139, 253, 881, 1834
LweI GCATC 5 cut(s) 21, 823, 1036, 1375, 1654
MaeI CTAG 5 cut(s) 438, 456, 702, 1293, 1821
MaeII ACGT 4 cut(s) 495, 561, 1151, 1543
MaeIII GTNAC 4 cut(s) 767, 1225, 1614, 1865
MbiI CCGCTC 2 cut(s) 378, 1416
MflI RGATCY 5 cut(s) 20, 518, 616, 664, 1438
MhlI GDGCHC 1 cut(s) 608
MluCI AATT 3 cut(s) 52, 1113, 1156
MlyI GAGTC 9 cut(s) 203, 419, 451, 686, 946, 1315, 1805, 1820, 1828
MmeI TCCRAC 1 cut(s) 1856
MroXI GAANNNNTTC 3 cut(s) 474, 549, 1205
MseI TTAA 7 cut(s) 6, 36, 777, 933, 1029, 1215, 1876
MslI CAYNNNNRTG 1 cut(s) 863
MspI CCGG 5 cut(s) 879, 1468, 1505, 1619, 1777
MspR9I CCNGG 4 cut(s) 231, 765, 879, 1506
Mva1269I GAATGC 2 cut(s) 92, 1500
MvaI CCWGG 2 cut(s) 231, 765
MwoI GCNNNNNNNGC 1 cut(s) 1497
NciI CCSGG 2 cut(s) 879, 1506
NlaIII CATG 7 cut(s) 86, 335, 695, 790, 811, 868, 1085
NlaIV GGNNCC 3 cut(s) 141, 727, 747
NmuCI GTSAC 4 cut(s) 767, 1225, 1614, 1865
NspI RCATGY 1 cut(s) 695
PagI TCATGA 1 cut(s) 864
PceI AGGCCT 1 cut(s) 1205
PciI ACATGT 1 cut(s) 691
PciSI GCTCTTC 1 cut(s) 1481
PcsI WCGNNNNNNNCGW 1 cut(s) 1532
PctI GAATGC 2 cut(s) 92, 1500
PdmI GAANNNNTTC 3 cut(s) 474, 549, 1205
PfeI GAWTC 7 cut(s) 74, 889, 1063, 1187, 1471, 1577, 1640
PfoI TCCNGGA 1 cut(s) 229
PleI GAGTC 9 cut(s) 202, 418, 450, 685, 945, 1314, 1804, 1819, 1828
PpsI GAGTC 9 cut(s) 202, 418, 450, 685, 945, 1314, 1804, 1819, 1828
PscI ACATGT 1 cut(s) 691
Psp6I CCWGG 2 cut(s) 229, 763
PspEI GGTNACC 1 cut(s) 767
PspGI CCWGG 2 cut(s) 229, 763
PspN4I GGNNCC 3 cut(s) 141, 727, 747
PspPI GGNCC 2 cut(s) 725, 1621
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 5 cut(s) 20, 518, 616, 664, 1438
RsaI GTAC 2 cut(s) 707, 1297
RsaNI GTAC 2 cut(s) 706, 1296
RseI CAYNNNNRTG 1 cut(s) 863
SapI GCTCTTC 1 cut(s) 1481
SaqAI TTAA 7 cut(s) 6, 36, 777, 933, 1029, 1215, 1876
Sau96I GGNCC 2 cut(s) 725, 1621
SchI GAGTC 9 cut(s) 203, 419, 451, 686, 946, 1315, 1805, 1820, 1828
ScrFI CCNGG 4 cut(s) 231, 765, 879, 1506
SduI GDGCHC 1 cut(s) 608
SfaNI GCATC 5 cut(s) 21, 823, 1036, 1375, 1654
SinI GGWCC 1 cut(s) 725
SmiMI CAYNNNNRTG 1 cut(s) 863
SmlI CTYRAG 1 cut(s) 1286
SmoI CTYRAG 1 cut(s) 1286
Sse9I AATT 3 cut(s) 52, 1113, 1156
SseBI AGGCCT 1 cut(s) 1205
SsiI CCGC 7 cut(s) 132, 378, 754, 1271, 1414, 1739, 1817
SspI AATATT 2 cut(s) 502, 913
SspMI CTAG 5 cut(s) 438, 456, 702, 1293, 1821
StuI AGGCCT 1 cut(s) 1205
StyD4I CCNGG 4 cut(s) 229, 763, 877, 1504
TaaI ACNGT 6 cut(s) 489, 1223, 1424, 1536, 1766, 1865
TaiI ACGT 4 cut(s) 498, 564, 1154, 1546
TaqI TCGA 5 cut(s) 72, 591, 940, 1190, 1443
TasI AATT 3 cut(s) 52, 1113, 1156
TatI WGTACW 1 cut(s) 1295
TfiI GAWTC 7 cut(s) 74, 889, 1063, 1187, 1471, 1577, 1640
Tru1I TTAA 7 cut(s) 6, 36, 777, 933, 1029, 1215, 1876
Tru9I TTAA 7 cut(s) 6, 36, 777, 933, 1029, 1215, 1876
TscAI CASTG 3 cut(s) 1234, 1375, 1870
TseFI GTSAC 4 cut(s) 767, 1225, 1614, 1865
Tsp45I GTSAC 4 cut(s) 767, 1225, 1614, 1865
TspGWI ACGGA 3 cut(s) 192, 887, 1607
TspRI CASTG 3 cut(s) 1234, 1375, 1870
VpaK11BI GGWCC 1 cut(s) 725
XagI CCTNNNNNAGG 1 cut(s) 762
XapI RAATTY 2 cut(s) 1113, 1156
XceI RCATGY 1 cut(s) 695
XcmI CCANNNNNNNNNTGG 1 cut(s) 1375
XmnI GAANNNNTTC 3 cut(s) 474, 549, 1205
XspI CTAG 5 cut(s) 438, 456, 702, 1293, 1821
ZraI GACGTC 2 cut(s) 1152, 1544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.