Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0007768

Physical Location & Seq

Genomic Coordinates Forward (+)

33460095 .. 33465510

Gene Structure 5416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1201400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGGGGAGGAGAAGCGGCACCAGATGATGCAGAACCTGTTCGGCGATCAATCCGAAGAGGAGGAAGAAGAGGTCGATTCCGAGCACGAGTCCAATCCCCAGCCCAATTCTGATGAAGGAGAGGGCGCTTTGGAGGCTGAGGGTGAAGGTGAAGTAGAGGGCCAGGGGGAGGTAGAAGCAGAGAGTGATGGTGAGCAGCCTAATGCTGATCCTGATCCCGGAGAAAGTGAGGGCGAAAGAGAACAGAGTTCCCAAGAAGTAGATATTGGTGATCATAGAGAAGAAAGTGAAGGAAAATATACAGATACTGATGAAAAAGAAGAGTTAACCAGCCGGAGACGAAATGTGATTGAAAGTGGGTCTGAGAGGTCTATGGAAAACCATTACCCTGACATTGAAGATGAGGTTAATCAGGCCAGAAGTCCAAGTAGATCCCCTGAGGAGGAAGAGGACCCTAATAACATCGCACACTCTGCTGTTCGTAATGTATTTGGTGACTCTGATGAAGAAGAAGAAGAAGAGGAGACAGATTATGCTGTTCGGAATGACATCCAGCATGAATCAAATAGATCACCAATGGAGGAGGAAGGCAGCTATGGAAAGAGTCCAAGACTAGAGGATGTAATGCCTGATGAAGATGCTAGGTATGATTCAGAAGAGGACAATATTGAGGCTAAACCTAGAGATAAACCGGTTGGCCCCCCATTGGAGCTAGAGATTCCACTACGTCCACCTCCTGCTCGTCCAGAAAAGATGAACATGATCAAAGTTTCAAATATCATGGGCATTGACCCCAAACCGTTTGATCCAAAGACATATGTGGAAGAGGATACATTTGTGACGGATGAATCAGGATCTAAGAAGCGTATACGTTTGGAGAACAACATTGTGCGCTGGAGGAGAGTTAGAAATCCAGATGGCACGACAACTAGTGAAAGCAATGCACGCTTTGTGAGATGGTCTGATGGCAGTTTGCAGCTATTAATTGGGAATGAAGTTCTAGATATATCTGTGCAAGAAGCACAGCATGATCAAGCGCACCTATTTCTCAGGCATGAAAAGGGAATCCTCCAGTCACAAGGAAAGGTGCTGAAGAAGATGAGGTTTATGCCATCGTCCTTGACATCAAATTCACATCGTTTGCTGACTGCTCTGGTTGATTCTCGACATAAAAAAGTATACAAGGTCAAGAACTGCGTTACTGACATCGATCCTGAGAGGGAAAAGGAGGAGAAAGAAAGGGCTGAAAGTCAAAATATCAGAGCTAATTTACTTCTTAATCGGAAGAAGGAGAAGGTGAGCCGCAAGTATACAACAACTGGGGACAGGAGGCGCCAACTTTCACCTGGTTTCTTGGAAGATGCTCTTGATGAGGATGAAGAACCAAATTATCATGACTCTCGTCGTTCTCGCCGCCATATGGAGGAGGATTTTGAAATGGAAGCTCGAAGAGAGAAACGCATTTTGAATGCTAAGAAGGGACCTAAAGATATCCCTCGCAAGTCATCCTTGCCAACTGCCAATTCATATCGGCGTTCAATGGGTTTGTCAGACGAGTCTGAGTATGAGACTGATGGGGAAGATGAGGAGCCTCCACGTAAGATGGCTGAGGATTCAGAGCCAGAGTATGAAGATTCGGAAGAAGAAGATGAGGAAGAGCATCATGATGCCGAGGTTAATGATGCATCAGAGGAGGAGGCTGAGGCGCCCAAGCAAAAGGTTAAGGACTCTGGACACAAGCGCAAGGCAGTCGAGTCAGATGAAGACTCTCCTCCTAGGAAGGCCGCACCACATCGCAGAATGGCTGTTGTTTATGATAGTGATGAGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006950 GO:0008023 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009910 GO:0010048 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016591 GO:0016593 GO:0019219 GO:0019222 GO:0019899 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045309 GO:0045893 GO:0045935 GO:0045944 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050815 GO:0050896 GO:0051093 GO:0051171 GO:0051173 GO:0051219 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070063 GO:0080090 GO:0099122 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990269 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Leo1

Protein Analysis

611

Amino Acids

70.1

Weight (kDa)

4.61

Isoelectric Point (pI)

86.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Leo1	PF04004	254 - 413	5.8e-49	Leo1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61150 AT5G61150
fragaria_vesca	FvH4_5g14030 FvH4_5g14030 FvH4_5g14030
malus_domestica	MD06G1201400.v1.1 MD14G1210500.v1.1
prunus_persica	Prupe.5G203800_v2.0.a1 Prupe.5G203800_v2.0.a1 Prupe.5G203800_v2.0.a1 Prupe.5G203800_v2.0.a1
pyrus_communis	pycom06g17740 pycom14g17380
rosa_chinensis	RchiOBHm_Chr7g0182791
rosa_laevigata	RLG00000005099
rosa_multiflora	Rmu_sc0000014.1_g000027
rosa_roxburghii	Rroxscaffold_3G00270970
rosa_rugosa	Rorug06G0450800.1 Rorug06G0450900
rosa_samantha	Rh7AG054100 Rh7BG053600 Rh7CG055200 Rh7DG053400
rosa_wichuraiana	Rw7G004410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	18, 1332, 1705
AccI	GTMKAC	3 cut(s)	868, 1179, 1310
AciI	CCGC	4 cut(s)	16, 1303, 1414, 1785
AclWI	GGATC	6 cut(s)	203, 209, 426, 800, 862, 1205
AcsI	RAATTY	1 cut(s)	1129
AcuI	CTGAAG	1 cut(s)	1112
AcyI	GRCGYC	2 cut(s)	1333, 1706
AfiI	CCNNNNNNNGG	6 cut(s)	169, 218, 442, 706, 1420, 1423
AgeI	ACCGGT	1 cut(s)	691
AgsI	TTSAA	6 cut(s)	353, 398, 774, 1436, 1468, 1539
AhlI	ACTAGT	1 cut(s)	929
AjnI	CCWGG	2 cut(s)	162, 1345
AjuI	GAANNNNNNNTTGG	4 cut(s)	249, 281, 1507, 1539
AluBI	AGCT	5 cut(s)	594, 712, 979, 1265, 1445
AluI	AGCT	5 cut(s)	594, 712, 979, 1265, 1445
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	3 cut(s)	331, 518, 1562
AlwI	GGATC	6 cut(s)	203, 209, 426, 800, 862, 1205
AlwNI	CAGNNNCTG	2 cut(s)	37, 308
AoxI	GGCC	4 cut(s)	160, 414, 697, 1782
ApeKI	GCWGC	3 cut(s)	196, 591, 976
ApoI	RAATTY	1 cut(s)	1129
AseI	ATTAAT	1 cut(s)	983
AsiGI	ACCGGT	1 cut(s)	691
Asp700I	GAANNNNTTC	1 cut(s)	38
AspA2I	CCTAGG	1 cut(s)	1775
AspLEI	GCGC	6 cut(s)	128, 894, 1039, 1335, 1708, 1743
AspS9I	GGNCC	4 cut(s)	160, 451, 698, 1481
AsuC2I	CCSGG	1 cut(s)	219
AsuHPI	GGTGA	8 cut(s)	155, 161, 203, 281, 506, 564, 1309, 1335
AvaII	GGWCC	2 cut(s)	451, 1481
AvrII	CCTAGG	1 cut(s)	1775
AxyI	CCTNAGG	1 cut(s)	438
BaeI	ACNNNNGTAYC	2 cut(s)	822, 855
BanI	GGYRCC	3 cut(s)	18, 1332, 1705
BauI	CACGAG	1 cut(s)	86
BbsI	GAAGAC	1 cut(s)	1770
Bbv12I	GWGCWC	1 cut(s)	87
BbvCI	CCTCAGC	3 cut(s)	138, 1608, 1701
BbvI	GCAGC	3 cut(s)	208, 603, 988
BccI	CCATC	7 cut(s)	182, 911, 951, 959, 1120, 1568, 1597
BcgI	CGANNNNNNTGC	2 cut(s)	1732, 1766
BciT130I	CCWGG	2 cut(s)	164, 1347
BciVI	GTATCC	1 cut(s)	823
BclI	TGATCA	3 cut(s)	271, 762, 1030
BcnI	CCSGG	1 cut(s)	219
BcoDI	GTCTC	3 cut(s)	331, 518, 1562
BcuI	ACTAGT	1 cut(s)	929
BfaI	CTAG	7 cut(s)	614, 642, 681, 713, 930, 1001, 1776
BfoI	RGCGCY	3 cut(s)	129, 1336, 1709
BfuI	GTATCC	1 cut(s)	823
BisI	GCNGC	7 cut(s)	17, 197, 592, 977, 1303, 1414, 1785
BlnI	CCTAGG	1 cut(s)	1775
BlsI	GCNGC	7 cut(s)	18, 198, 593, 978, 1304, 1415, 1786
Bme1390I	CCNGG	3 cut(s)	164, 219, 1347
Bme18I	GGWCC	2 cut(s)	451, 1481
BmgT120I	GGNCC	4 cut(s)	160, 451, 698, 1481
BmiI	GGNNCC	7 cut(s)	20, 453, 700, 1334, 1482, 1590, 1707
BmrFI	CCNGG	3 cut(s)	164, 219, 1347
BmrI	ACTGGG	1 cut(s)	1329
BmsI	GCATC	7 cut(s)	18, 628, 1351, 1657, 1669, 1672, 1694
BmuI	ACTGGG	1 cut(s)	1329
BoxI	GACNNNNGTC	1 cut(s)	1401
BpiI	GAAGAC	1 cut(s)	1770
BpmI	CTGGAG	2 cut(s)	916, 1055
Bpu10I	CCTNAGC	3 cut(s)	138, 1608, 1701
BpuMI	CCSGG	1 cut(s)	219
Bsa29I	ATCGAT	1 cut(s)	1209
BsaAI	YACGTR	1 cut(s)	1598
BsaBI	GATNNNNATC	1 cut(s)	213
BsaHI	GRCGYC	2 cut(s)	1333, 1706
BsaJI	CCNNGG	3 cut(s)	163, 1671, 1775
BsaWI	WCCGGW	1 cut(s)	691
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 218, 442, 706, 1420, 1423
Bse118I	RCCGGY	1 cut(s)	691
Bse1I	ACTGG	2 cut(s)	1072, 1324
Bse21I	CCTNAGG	1 cut(s)	438
Bse3DI	GCAATG	1 cut(s)	946
Bse8I	GATNNNNATC	1 cut(s)	213
BseBI	CCWGG	2 cut(s)	164, 1347
BseCI	ATCGAT	1 cut(s)	1209
BseDI	CCNNGG	3 cut(s)	163, 1671, 1775
BseGI	GGATG	5 cut(s)	549, 625, 850, 1381, 1505
BseJI	GATNNNNATC	1 cut(s)	213
BseLI	CCNNNNNNNGG	6 cut(s)	169, 218, 442, 706, 1420, 1423
BseMI	GCAATG	1 cut(s)	946
BseMII	CTCAG	8 cut(s)	129, 354, 429, 1063, 1206, 1551, 1599, 1692
BseNI	ACTGG	2 cut(s)	1072, 1324
BseXI	GCAGC	3 cut(s)	208, 603, 988
BseYI	CCCAGC	1 cut(s)	99
BshFI	GGCC	4 cut(s)	162, 416, 699, 1784
BshNI	GGYRCC	3 cut(s)	18, 1332, 1705
BshTI	ACCGGT	1 cut(s)	691
BshVI	ATCGAT	1 cut(s)	1209
BsiHKAI	GWGCWC	1 cut(s)	87
BsiSI	CCGG	3 cut(s)	219, 334, 692
BslFI	GGGAC	2 cut(s)	1337, 1494
BslI	CCNNNNNNNGG	6 cut(s)	169, 218, 442, 706, 1420, 1423
BsmAI	GTCTC	3 cut(s)	331, 518, 1562
BsmBI	CGTCTC	1 cut(s)	331
BsmFI	GGGAC	2 cut(s)	1337, 1494
BsmI	GAATGC	1 cut(s)	1474
BsnI	GGCC	4 cut(s)	162, 416, 699, 1784
Bsp1286I	GDGCHC	1 cut(s)	87
BspACI	CCGC	4 cut(s)	16, 1303, 1414, 1785
BspANI	GGCC	4 cut(s)	162, 416, 699, 1784
BspCNI	CTCAG	8 cut(s)	130, 355, 430, 1062, 1207, 1552, 1600, 1693
BspDI	ATCGAT	1 cut(s)	1209
BspHI	TCATGA	2 cut(s)	1393, 1663
BspLI	GGNNCC	7 cut(s)	20, 453, 700, 1334, 1482, 1590, 1707
BspPI	GGATC	6 cut(s)	203, 209, 426, 800, 862, 1205
BspQI	GCTCTTC	1 cut(s)	1650
BspT107I	GGYRCC	3 cut(s)	18, 1332, 1705
BsrDI	GCAATG	1 cut(s)	946
BsrFI	RCCGGY	1 cut(s)	691
BsrI	ACTGG	2 cut(s)	1072, 1324
BssAI	RCCGGY	1 cut(s)	691
BssECI	CCNNGG	3 cut(s)	163, 1671, 1775
BssNAI	GTATAC	3 cut(s)	869, 1180, 1311
BssNI	GRCGYC	2 cut(s)	1333, 1706
BssSI	CACGAG	1 cut(s)	86
BssT1I	CCWWGG	1 cut(s)	1775
Bst1107I	GTATAC	3 cut(s)	869, 1180, 1311
Bst2BI	CACGAG	1 cut(s)	86
Bst2UI	CCWGG	2 cut(s)	164, 1347
Bst4CI	ACNGT	1 cut(s)	801
Bst6I	CTCTTC	9 cut(s)	51, 63, 315, 441, 513, 651, 819, 1444, 1650
BstACI	GRCGYC	2 cut(s)	1333, 1706
BstAPI	GCANNNNNTGC	1 cut(s)	473
BstBAI	YACGTR	1 cut(s)	1598
BstC8I	GCNNGC	1 cut(s)	946
BstF5I	GGATG	5 cut(s)	549, 625, 850, 1381, 1505
BstH2I	RGCGCY	3 cut(s)	129, 1336, 1709
BstHHI	GCGC	6 cut(s)	128, 894, 1039, 1335, 1708, 1743
BstMAI	GTCTC	3 cut(s)	331, 518, 1562
BstMWI	GCNNNNNNNGC	3 cut(s)	134, 473, 945
BstNI	CCWGG	2 cut(s)	164, 1347
BstPAI	GACNNNNGTC	1 cut(s)	1401
BstSCI	CCNGG	3 cut(s)	162, 217, 1345
BstV1I	GCAGC	3 cut(s)	208, 603, 988
BstV2I	GAAGAC	1 cut(s)	1770
BstX2I	RGATCY	2 cut(s)	431, 854
BstYI	RGATCY	2 cut(s)	431, 854
BstZ17I	GTATAC	3 cut(s)	869, 1180, 1311
Bsu15I	ATCGAT	1 cut(s)	1209
Bsu36I	CCTNAGG	1 cut(s)	438
BsuI	GTATCC	1 cut(s)	823
BsuRI	GGCC	4 cut(s)	162, 416, 699, 1784
BsuTUI	ATCGAT	1 cut(s)	1209
BtgZI	GCGATG	2 cut(s)	448, 1778
BtsCI	GGATG	5 cut(s)	549, 625, 850, 1381, 1505
Cac8I	GCNNGC	1 cut(s)	946
CaiI	CAGNNNCTG	2 cut(s)	37, 308
CciI	TCATGA	2 cut(s)	1393, 1663
CfoI	GCGC	6 cut(s)	128, 894, 1039, 1335, 1708, 1743
Cfr10I	RCCGGY	1 cut(s)	691
Cfr13I	GGNCC	4 cut(s)	160, 451, 698, 1481
ClaI	ATCGAT	1 cut(s)	1209
CsiI	ACCWGGT	1 cut(s)	1345
CspAI	ACCGGT	1 cut(s)	691
CviAII	CATG	7 cut(s)	557, 760, 781, 1028, 1055, 1394, 1664
DinI	GGCGCC	2 cut(s)	1334, 1707
Eam1104I	CTCTTC	9 cut(s)	51, 63, 315, 441, 513, 651, 819, 1444, 1650
EarI	CTCTTC	9 cut(s)	51, 63, 315, 441, 513, 651, 819, 1444, 1650
Eco130I	CCWWGG	1 cut(s)	1775
Eco32I	GATATC	1 cut(s)	1492
Eco47I	GGWCC	2 cut(s)	451, 1481
Eco57I	CTGAAG	1 cut(s)	1112
Eco81I	CCTNAGG	1 cut(s)	438
EcoO109I	RGGNCCY	2 cut(s)	451, 1481
EcoRII	CCWGG	2 cut(s)	162, 1345
EcoRV	GATATC	1 cut(s)	1492
EcoT14I	CCWWGG	1 cut(s)	1775
EcoT22I	ATGCAT	1 cut(s)	1687
EgeI	GGCGCC	2 cut(s)	1334, 1707
EheI	GGCGCC	2 cut(s)	1334, 1707
ErhI	CCWWGG	1 cut(s)	1775
Esp3I	CGTCTC	1 cut(s)	331
FaeI	CATG	7 cut(s)	560, 763, 784, 1031, 1058, 1397, 1667
FalI	AAGNNNNNCTT	4 cut(s)	1350, 1382, 1493, 1525
FaqI	GGGAC	2 cut(s)	1337, 1494
FatI	CATG	7 cut(s)	556, 759, 780, 1027, 1054, 1393, 1663
FauNDI	CATATG	2 cut(s)	817, 1419
FbaI	TGATCA	3 cut(s)	271, 762, 1030
FblI	GTMKAC	3 cut(s)	868, 1179, 1310
Fnu4HI	GCNGC	7 cut(s)	17, 197, 592, 977, 1303, 1414, 1785
FokI	GGATG	5 cut(s)	536, 632, 857, 1388, 1492
Fsp4HI	GCNGC	7 cut(s)	17, 197, 592, 977, 1303, 1414, 1785
FspBI	CTAG	7 cut(s)	614, 642, 681, 713, 930, 1001, 1776
GlaI	GCGC	6 cut(s)	127, 893, 1038, 1334, 1707, 1742
GluI	GCNGC	7 cut(s)	17, 197, 592, 977, 1303, 1414, 1785
GsaI	CCCAGC	1 cut(s)	103
GsuI	CTGGAG	2 cut(s)	916, 1055
HaeII	RGCGCY	3 cut(s)	129, 1336, 1709
HaeIII	GGCC	4 cut(s)	162, 416, 699, 1784
HapII	CCGG	3 cut(s)	219, 334, 692
HhaI	GCGC	6 cut(s)	128, 894, 1039, 1335, 1708, 1743
Hin1I	GRCGYC	2 cut(s)	1333, 1706
Hin1II	CATG	7 cut(s)	560, 763, 784, 1031, 1058, 1397, 1667
Hin6I	GCGC	6 cut(s)	126, 892, 1037, 1333, 1706, 1741
HinP1I	GCGC	6 cut(s)	126, 892, 1037, 1333, 1706, 1741
HincII	GTYRAC	1 cut(s)	327
HindII	GTYRAC	1 cut(s)	327
HpaI	GTTAAC	1 cut(s)	327
HpaII	CCGG	3 cut(s)	219, 334, 692
HphI	GGTGA	8 cut(s)	155, 161, 203, 281, 506, 564, 1309, 1335
Hpy166II	GTNNAC	5 cut(s)	327, 731, 869, 1180, 1311
Hpy8I	GTNNAC	5 cut(s)	327, 731, 869, 1180, 1311
Hpy99I	CGWCG	1 cut(s)	1407
HpyAV	CCTTC	8 cut(s)	110, 140, 284, 581, 1282, 1288, 1471, 1774
HpyCH4III	ACNGT	1 cut(s)	801
HpyCH4IV	ACGT	3 cut(s)	727, 871, 1597
HpyCH4V	TGCA	5 cut(s)	31, 944, 976, 1015, 1685
HpyF10VI	GCNNNNNNNGC	3 cut(s)	134, 473, 945
HpySE526I	ACGT	3 cut(s)	727, 871, 1597
Hsp92I	GRCGYC	2 cut(s)	1333, 1706
Hsp92II	CATG	7 cut(s)	560, 763, 784, 1031, 1058, 1397, 1667
HspAI	GCGC	6 cut(s)	126, 892, 1037, 1333, 1706, 1741
KasI	GGCGCC	2 cut(s)	1332, 1705
Ksp22I	TGATCA	3 cut(s)	271, 762, 1030
KspAI	GTTAAC	1 cut(s)	327
LguI	GCTCTTC	1 cut(s)	1650
LmnI	GCTCC	2 cut(s)	709, 1588
Lsp1109I	GCAGC	3 cut(s)	208, 603, 988
LweI	GCATC	7 cut(s)	18, 628, 1351, 1657, 1669, 1672, 1694
MabI	ACCWGGT	1 cut(s)	1345
MaeI	CTAG	7 cut(s)	614, 642, 681, 713, 930, 1001, 1776
MaeII	ACGT	3 cut(s)	727, 871, 1597
MaeIII	GTNAC	4 cut(s)	494, 838, 1074, 1198
MflI	RGATCY	2 cut(s)	431, 854
MhlI	GDGCHC	1 cut(s)	87
MluCI	AATT	6 cut(s)	106, 984, 1129, 1267, 1387, 1522
Mly113I	GGCGCC	2 cut(s)	1333, 1706
MlyI	GAGTC	8 cut(s)	98, 491, 613, 1391, 1565, 1721, 1760, 1763
Mph1103I	ATGCAT	1 cut(s)	1687
MroXI	GAANNNNTTC	1 cut(s)	38
MseI	TTAA	6 cut(s)	326, 408, 983, 1278, 1677, 1722
MslI	CAYNNNNRTG	1 cut(s)	1665
MspI	CCGG	3 cut(s)	219, 334, 692
MspR9I	CCNGG	3 cut(s)	164, 219, 1347
Mva1269I	GAATGC	1 cut(s)	1474
MvaI	CCWGG	2 cut(s)	164, 1347
MwoI	GCNNNNNNNGC	3 cut(s)	134, 473, 945
NarI	GGCGCC	2 cut(s)	1333, 1706
NciI	CCSGG	1 cut(s)	219
NdeI	CATATG	2 cut(s)	817, 1419
NlaIII	CATG	7 cut(s)	560, 763, 784, 1031, 1058, 1397, 1667
NlaIV	GGNNCC	7 cut(s)	20, 453, 700, 1334, 1482, 1590, 1707
NmeAIII	GCCGAG	1 cut(s)	1696
NmuCI	GTSAC	3 cut(s)	494, 838, 1074
NsiI	ATGCAT	1 cut(s)	1687
PagI	TCATGA	2 cut(s)	1393, 1663
PciSI	GCTCTTC	1 cut(s)	1650
PctI	GAATGC	1 cut(s)	1474
PdmI	GAANNNNTTC	1 cut(s)	38
PfeI	GAWTC	9 cut(s)	77, 560, 650, 718, 848, 1065, 1160, 1613, 1634
PfoI	TCCNGGA	1 cut(s)	217
PinAI	ACCGGT	1 cut(s)	691
PkrI	GCNGC	7 cut(s)	18, 198, 593, 978, 1304, 1415, 1786
PleI	GAGTC	8 cut(s)	97, 491, 612, 1391, 1564, 1721, 1760, 1762
PluTI	GGCGCC	2 cut(s)	1336, 1709
PpsI	GAGTC	8 cut(s)	97, 491, 612, 1391, 1564, 1721, 1760, 1762
Ppu21I	YACGTR	1 cut(s)	1598
PpuMI	RGGWCCY	2 cut(s)	451, 1481
PshAI	GACNNNNGTC	1 cut(s)	1401
PshBI	ATTAAT	1 cut(s)	983
Psp5II	RGGWCCY	2 cut(s)	451, 1481
Psp6I	CCWGG	2 cut(s)	162, 1345
PspFI	CCCAGC	1 cut(s)	99
PspGI	CCWGG	2 cut(s)	162, 1345
PspN4I	GGNNCC	7 cut(s)	20, 453, 700, 1334, 1482, 1590, 1707
PspPI	GGNCC	4 cut(s)	160, 451, 698, 1481
PspPPI	RGGWCCY	2 cut(s)	451, 1481
PstNI	CAGNNNCTG	2 cut(s)	37, 308
PsuI	RGATCY	2 cut(s)	431, 854
RseI	CAYNNNNRTG	1 cut(s)	1665
SapI	GCTCTTC	1 cut(s)	1650
SaqAI	TTAA	6 cut(s)	326, 408, 983, 1278, 1677, 1722
SatI	GCNGC	7 cut(s)	17, 197, 592, 977, 1303, 1414, 1785
Sau96I	GGNCC	4 cut(s)	160, 451, 698, 1481
SchI	GAGTC	8 cut(s)	98, 491, 613, 1391, 1565, 1721, 1760, 1763
ScrFI	CCNGG	3 cut(s)	164, 219, 1347
SduI	GDGCHC	1 cut(s)	87
SexAI	ACCWGGT	1 cut(s)	1345
SfaNI	GCATC	7 cut(s)	18, 628, 1351, 1657, 1669, 1672, 1694
SfoI	GGCGCC	2 cut(s)	1334, 1707
SinI	GGWCC	2 cut(s)	451, 1481
SmiMI	CAYNNNNRTG	1 cut(s)	1665
SpeI	ACTAGT	1 cut(s)	929
Sse9I	AATT	6 cut(s)	106, 984, 1129, 1267, 1387, 1522
SsiI	CCGC	4 cut(s)	16, 1303, 1414, 1785
SspDI	GGCGCC	2 cut(s)	1332, 1705
SspI	AATATT	1 cut(s)	667
SspMI	CTAG	7 cut(s)	614, 642, 681, 713, 930, 1001, 1776
StyD4I	CCNGG	3 cut(s)	162, 217, 1345
StyI	CCWWGG	1 cut(s)	1775
TaaI	ACNGT	1 cut(s)	801
TaiI	ACGT	3 cut(s)	730, 874, 1600
TaqI	TCGA	5 cut(s)	75, 1165, 1209, 1447, 1752
TasI	AATT	6 cut(s)	106, 984, 1129, 1267, 1387, 1522
TauI	GCSGC	4 cut(s)	19, 1305, 1416, 1787
TfiI	GAWTC	9 cut(s)	77, 560, 650, 718, 848, 1065, 1160, 1613, 1634
Tru1I	TTAA	6 cut(s)	326, 408, 983, 1278, 1677, 1722
Tru9I	TTAA	6 cut(s)	326, 408, 983, 1278, 1677, 1722
TseFI	GTSAC	3 cut(s)	494, 838, 1074
TseI	GCWGC	3 cut(s)	196, 591, 976
Tsp45I	GTSAC	3 cut(s)	494, 838, 1074
TspGWI	ACGGA	1 cut(s)	857
VpaK11BI	GGWCC	2 cut(s)	451, 1481
VspI	ATTAAT	1 cut(s)	983
XapI	RAATTY	1 cut(s)	1129
XbaI	TCTAGA	1 cut(s)	1000
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1343
XmaJI	CCTAGG	1 cut(s)	1775
XmiI	GTMKAC	3 cut(s)	868, 1179, 1310
XmnI	GAANNNNTTC	1 cut(s)	38
XspI	CTAG	7 cut(s)	614, 642, 681, 713, 930, 1001, 1776
Zsp2I	ATGCAT	1 cut(s)	1687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.