Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0007768

Physical Location & Seq

Genomic Coordinates Forward (+)

3980729 .. 3985731

Gene Structure 5003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG055200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGGGGAAGAGAAGAGGCACCAGATGATGCAAAACCTCTTCGGCGAACAATCCGAAGAAGAAGAAGAGGTGGACTCCGAGCACGAGTCCAATCCCCAGCCCCACTACGCCTCGGACGAAGGAGGAGGGCTGGAGCCTGAGGGTGAAGGGGAAGTGGAGGGCCAGGGAGAGGTGGAAGTAGAGAGTGAAGGGGAGCCGCGTGAAGCTGATCCTGATCCAGGAGAAAGTGAGGGTGAAAGGGAATCCCAAGAAGTGGAAATCCAAAGAGAAGAAAGTGAAGGAAATACAGACACTGATGAGAAAGAAGAGTTAACAAGCCGGAGACGAAATGCTATTGAAAGTGGATCCGAGAGGTCTGAGGAAAACCATTACCCTGACAATGAAGACTATGAGGTTAATCAGGCTAGAAGTCCAAGTAGATCGCCTGCAGAGGAGAAAGACCAGACTCGTAACGCGCATTCCGCTGTACTTGATGTATTTGGTGATGACTCTGAAGAAGAAGAAGAAGAAGAAGAAGAGGATCGAACACGTTACGCTCATCGGAATGACATGGAGCATGATTCAAATAGATCCCCTATGGAAGAGGAAGGGAGCTATGACAAGAGTCCAAGAATAGAGGACGAAATGCAGGATGAAGAACCTAGATATGAGTCAGAAGAGGAAAATATGGAGGTTAAACCTAGAGAGAGACCTGTTGGCCCCCCATTGGAGCTAGAGATTCCATTGCGTCCACCTCCTGCTCATCCCGAAAAGATGAACATGATCAAAGTTTCAAATATCATGGGCATTGACCGCAAACAGTTTGATCCAAAGACATATGTGGAGGAGGACACGTTTGTGACAGATGAATCTGGATCTAAGAAACGTATACGTTTGGAAAACAATATTGTGCGCTGGAGGAAAGTTAGAACTTCAGACGGCAGATTATCTTGTGAGAGTAATGCACGCTTTGTGAGATGGTCTGATGGCAGTTTGCAATTATTAATTGGAAATGAAGTTTTAGATATATCAGTGCAAGAGGCACAACATGATCAAGCACACCTATTTCTCAGGCATGAAAAGGGAATCCTCCAATCACAAGGAAAGGTTATGAAGAAGATGAGGTTTATGCCGTCTTCCTTGGCCTCAAATTCTCATAGACTATTGACTGCTCTGGTTGATTCTCGACATAAAAAAGTGTACAAGGTTAAGAACTGTGTTACTGACATCGATCCTGAGAGAGAAAAGGAGGAGAAAGAAAGGGCTGAAAGTCAAACAATCAGAGCTAATTTACTTCTTAACCGGAAGAGGGAGAAGGTGAATCGAAAATATACACCCACTGTTGACAGGAGGCGCCAACTTTCACCTGGTTTCTTGGAGGAGGCTCTGGATGAGGATGATGAAGAAGATTATCATGAGTCTCGTCGTTCACGCCGCCATATCGAGGAGGAAGAAGCTCGAGTAGAGAAACGCATTATGAATGCTAAGAAGGCACAGAGACCTAAAGAATTCCCTCGCAAGTCATCCTTTCCAACTGGTAGATCTGCTCGGCAACAGCTGGATCTATCTGATAGCGAAAGAGGTGAGTCTGAATATGAAACCGATGGGGAAGAAGATGAGAGGTCTCCTCCACGTAAGAGGGCCATAGATCCAGAGCCGGAATATGAAGACGAGGAAGAAGATGATTATGAAGAAGAGGCAGAAGTAAATGAGGCATCAGAGGAGGAGGCTGAGGGGCCTAAGCAAAAAGTTAAGGGCTCTGGACATGGTCTCAAGCGCAAGGAAATTGAGTCAGACGAAGACTCTCCTCCTAGGAAGACTACAACACATCGTAGAATGGCAGTAGTTTACGACAGTGATGAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0000993 GO:0001098 GO:0001099 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006950 GO:0008023 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009910 GO:0010048 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016591 GO:0016593 GO:0019219 GO:0019222 GO:0019899 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0034243 GO:0043175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044877 GO:0045309 GO:0045893 GO:0045935 GO:0045944 GO:0048518 GO:0048519 GO:0048522 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050815 GO:0050896 GO:0051093 GO:0051171 GO:0051173 GO:0051219 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070063 GO:0080090 GO:0099122 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:1990269 GO:2000026 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Leo1

Protein Analysis

615

Amino Acids

71.5

Weight (kDa)

4.68

Isoelectric Point (pI)

85.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Leo1	PF04004	254 - 413	7.5e-47	Leo1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61150 AT5G61150
fragaria_vesca	FvH4_5g14030 FvH4_5g14030 FvH4_5g14030
malus_domestica	MD06G1201400.v1.1 MD14G1210500.v1.1
prunus_persica	Prupe.5G203800_v2.0.a1 Prupe.5G203800_v2.0.a1 Prupe.5G203800_v2.0.a1 Prupe.5G203800_v2.0.a1
pyrus_communis	pycom06g17740 pycom14g17380
rosa_chinensis	RchiOBHm_Chr7g0182791
rosa_laevigata	RLG00000005099
rosa_multiflora	Rmu_sc0000014.1_g000027
rosa_roxburghii	Rroxscaffold_3G00270970
rosa_rugosa	Rorug06G0450800.1 Rorug06G0450900
rosa_samantha	Rh7AG054100 Rh7BG053600 Rh7CG055200 Rh7DG053400
rosa_wichuraiana	Rw7G004410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	18, 1332
AccB7I	CCANNNNNTGG	1 cut(s)	253
AccI	GTMKAC	1 cut(s)	868
AccII	CGCG	2 cut(s)	199, 455
AciI	CCGC	4 cut(s)	197, 462, 793, 1414
AcsI	RAATTY	2 cut(s)	1129, 1487
AcuI	CTGAAG	2 cut(s)	513, 897
AcyI	GRCGYC	1 cut(s)	1333
AfaI	GTAC	2 cut(s)	468, 1181
AfiI	CCNNNNNNNGG	6 cut(s)	169, 218, 253, 706, 1288, 1423
AflIII	ACRYGT	2 cut(s)	527, 831
AgsI	TTSAA	3 cut(s)	338, 564, 774
AjnI	CCWGG	3 cut(s)	162, 217, 1345
AleI	CACNNNNGTG	1 cut(s)	836
AluBI	AGCT	6 cut(s)	206, 594, 712, 1265, 1436, 1537
AluI	AGCT	6 cut(s)	206, 594, 712, 1265, 1436, 1537
Alw21I	GWGCWC	1 cut(s)	84
Alw26I	GTCTC	6 cut(s)	316, 682, 1404, 1471, 1608, 1754
AlwNI	CAGNNNCTG	1 cut(s)	293
Ama87I	CYCGRG	1 cut(s)	1437
AoxI	GGCC	5 cut(s)	160, 697, 1122, 1620, 1715
ApoI	RAATTY	2 cut(s)	1129, 1487
AseI	ATTAAT	1 cut(s)	983
AspA2I	CCTAGG	1 cut(s)	1790
AspLEI	GCGC	4 cut(s)	457, 894, 1335, 1758
AspS9I	GGNCC	4 cut(s)	160, 698, 1620, 1715
AsuHPI	GGTGA	6 cut(s)	155, 245, 494, 1309, 1335, 1574
AvaI	CYCGRG	1 cut(s)	1437
AvrII	CCTAGG	1 cut(s)	1790
AxyI	CCTNAGG	1 cut(s)	138
BamHI	GGATCC	1 cut(s)	344
BanI	GGYRCC	2 cut(s)	18, 1332
BanII	GRGCYC	1 cut(s)	1739
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	5 cut(s)	390, 1107, 1653, 1785, 1802
Bbv12I	GWGCWC	1 cut(s)	84
BbvCI	CCTCAGC	1 cut(s)	1710
BccI	CCATC	3 cut(s)	951, 959, 1577
BceAI	ACGGC	2 cut(s)	934, 1096
BciT130I	CCWGG	3 cut(s)	164, 219, 1347
BclI	TGATCA	2 cut(s)	762, 1030
BcoDI	GTCTC	6 cut(s)	316, 682, 1404, 1471, 1608, 1754
BfaI	CTAG	5 cut(s)	405, 642, 681, 713, 1791
BfmI	CTRYAG	1 cut(s)	426
BfoI	RGCGCY	1 cut(s)	1336
BglII	AGATCT	1 cut(s)	1520
BisI	GCNGC	2 cut(s)	197, 1414
BlnI	CCTAGG	1 cut(s)	1790
BlsI	GCNGC	2 cut(s)	198, 1415
Bme1390I	CCNGG	3 cut(s)	164, 219, 1347
BmeT110I	CYCGRG	1 cut(s)	1437
BmgT120I	GGNCC	4 cut(s)	160, 698, 1620, 1715
BmiI	GGNNCC	7 cut(s)	20, 135, 195, 346, 700, 1334, 1716
BmrFI	CCNGG	3 cut(s)	164, 219, 1347
BmsI	GCATC	2 cut(s)	18, 1703
BoxI	GACNNNNGTC	1 cut(s)	603
BpiI	GAAGAC	5 cut(s)	390, 1107, 1653, 1785, 1802
BplI	GAGNNNNNCTC	4 cut(s)	59, 91, 1591, 1623
BpmI	CTGGAG	2 cut(s)	152, 916
Bpu10I	CCTNAGC	2 cut(s)	1710, 1719
BpuEI	CTTGAG	1 cut(s)	1736
Bsa29I	ATCGAT	1 cut(s)	1209
BsaAI	YACGTR	1 cut(s)	1613
BsaBI	GATNNNNATC	1 cut(s)	213
BsaHI	GRCGYC	1 cut(s)	1333
BsaI	GGTCTC	4 cut(s)	682, 1471, 1608, 1754
BsaJI	CCNNGG	4 cut(s)	111, 163, 1119, 1790
BsaWI	WCCGGW	1 cut(s)	1281
BsaXI	ACNNNNNCTCC	2 cut(s)	818, 848
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 218, 253, 706, 1288, 1423
Bse1I	ACTGG	1 cut(s)	1519
Bse21I	CCTNAGG	1 cut(s)	138
Bse3DI	GCAATG	1 cut(s)	722
Bse8I	GATNNNNATC	1 cut(s)	213
BseBI	CCWGG	3 cut(s)	164, 219, 1347
BseCI	ATCGAT	1 cut(s)	1209
BseDI	CCNNGG	4 cut(s)	111, 163, 1119, 1790
BseGI	GGATG	5 cut(s)	637, 742, 1375, 1381, 1502
BseJI	GATNNNNATC	1 cut(s)	213
BseLI	CCNNNNNNNGG	6 cut(s)	169, 218, 253, 706, 1288, 1423
BseMI	GCAATG	1 cut(s)	722
BseMII	CTCAG	5 cut(s)	129, 348, 1063, 1206, 1701
BseNI	ACTGG	1 cut(s)	1519
BseYI	CCCAGC	1 cut(s)	96
Bsh1236I	CGCG	2 cut(s)	199, 455
BshFI	GGCC	5 cut(s)	162, 699, 1124, 1622, 1717
BshNI	GGYRCC	2 cut(s)	18, 1332
BshVI	ATCGAT	1 cut(s)	1209
BsiHKAI	GWGCWC	1 cut(s)	84
BsiHKCI	CYCGRG	1 cut(s)	1437
BsiSI	CCGG	3 cut(s)	319, 1282, 1637
BslI	CCNNNNNNNGG	6 cut(s)	169, 218, 253, 706, 1288, 1423
BsmAI	GTCTC	6 cut(s)	316, 682, 1404, 1471, 1608, 1754
BsmBI	CGTCTC	1 cut(s)	316
BsmI	GAATGC	2 cut(s)	457, 1465
BsnI	GGCC	5 cut(s)	162, 699, 1124, 1622, 1717
Bso31I	GGTCTC	4 cut(s)	682, 1471, 1608, 1754
BsoBI	CYCGRG	1 cut(s)	1437
Bsp1286I	GDGCHC	2 cut(s)	84, 1739
Bsp1407I	TGTACA	1 cut(s)	1179
BspACI	CCGC	4 cut(s)	197, 462, 793, 1414
BspANI	GGCC	5 cut(s)	162, 699, 1124, 1622, 1717
BspCNI	CTCAG	5 cut(s)	130, 349, 1062, 1207, 1702
BspDI	ATCGAT	1 cut(s)	1209
BspFNI	CGCG	2 cut(s)	199, 455
BspHI	TCATGA	1 cut(s)	1393
BspLI	GGNNCC	7 cut(s)	20, 135, 195, 346, 700, 1334, 1716
BspMAI	CTGCAG	1 cut(s)	430
BspT107I	GGYRCC	2 cut(s)	18, 1332
BspTNI	GGTCTC	4 cut(s)	682, 1471, 1608, 1754
BsrDI	GCAATG	1 cut(s)	722
BsrGI	TGTACA	1 cut(s)	1179
BsrI	ACTGG	1 cut(s)	1519
BssECI	CCNNGG	4 cut(s)	111, 163, 1119, 1790
BssNAI	GTATAC	1 cut(s)	869
BssNI	GRCGYC	1 cut(s)	1333
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	2 cut(s)	1119, 1790
Bst1107I	GTATAC	1 cut(s)	869
Bst2BI	CACGAG	1 cut(s)	83
Bst2UI	CCWGG	3 cut(s)	164, 219, 1347
Bst4CI	ACNGT	4 cut(s)	801, 1196, 1321, 1835
BstACI	GRCGYC	1 cut(s)	1333
BstAUI	TGTACA	1 cut(s)	1179
BstBAI	YACGTR	1 cut(s)	1613
BstC8I	GCNNGC	2 cut(s)	426, 946
BstDEI	CTNAG	8 cut(s)	138, 357, 858, 1049, 1215, 1464, 1710, 1719
BstENI	CCTNNNNNAGG	1 cut(s)	216
BstF5I	GGATG	5 cut(s)	637, 742, 1375, 1381, 1502
BstFNI	CGCG	2 cut(s)	199, 455
BstH2I	RGCGCY	1 cut(s)	1336
BstHHI	GCGC	4 cut(s)	457, 894, 1335, 1758
BstMAI	GTCTC	6 cut(s)	316, 682, 1404, 1471, 1608, 1754
BstMWI	GCNNNNNNNGC	3 cut(s)	461, 792, 1469
BstNI	CCWGG	3 cut(s)	164, 219, 1347
BstPAI	GACNNNNGTC	1 cut(s)	603
BstSCI	CCNGG	3 cut(s)	162, 217, 1345
BstSFI	CTRYAG	1 cut(s)	426
BstUI	CGCG	2 cut(s)	199, 455
BstV2I	GAAGAC	5 cut(s)	390, 1107, 1653, 1785, 1802
BstX2I	RGATCY	6 cut(s)	344, 569, 854, 1520, 1540, 1627
BstYI	RGATCY	6 cut(s)	344, 569, 854, 1520, 1540, 1627
BstZ17I	GTATAC	1 cut(s)	869
Bsu15I	ATCGAT	1 cut(s)	1209
Bsu36I	CCTNAGG	1 cut(s)	138
BsuRI	GGCC	5 cut(s)	162, 699, 1124, 1622, 1717
BsuTUI	ATCGAT	1 cut(s)	1209
BtsCI	GGATG	5 cut(s)	637, 742, 1375, 1381, 1502
BtsIMutI	CAGTG	4 cut(s)	291, 1017, 1317, 1840
Cac8I	GCNNGC	2 cut(s)	426, 946
CaiI	CAGNNNCTG	1 cut(s)	293
CciI	TCATGA	1 cut(s)	1393
CfoI	GCGC	4 cut(s)	457, 894, 1335, 1758
Cfr13I	GGNCC	4 cut(s)	160, 698, 1620, 1715
ClaI	ATCGAT	1 cut(s)	1209
CseI	GACGC	1 cut(s)	716
CsiI	ACCWGGT	1 cut(s)	1345
Csp6I	GTAC	2 cut(s)	467, 1180
CviAII	CATG	8 cut(s)	550, 557, 760, 781, 1028, 1055, 1394, 1745
CviQI	GTAC	2 cut(s)	467, 1180
DdeI	CTNAG	8 cut(s)	138, 357, 858, 1049, 1215, 1464, 1710, 1719
DinI	GGCGCC	1 cut(s)	1334
Eco130I	CCWWGG	2 cut(s)	1119, 1790
Eco24I	GRGCYC	1 cut(s)	1739
Eco31I	GGTCTC	4 cut(s)	682, 1471, 1608, 1754
Eco57I	CTGAAG	2 cut(s)	513, 897
Eco81I	CCTNAGG	1 cut(s)	138
Eco88I	CYCGRG	1 cut(s)	1437
EcoNI	CCTNNNNNAGG	1 cut(s)	216
EcoO109I	RGGNCCY	1 cut(s)	1715
EcoRI	GAATTC	1 cut(s)	1487
EcoRII	CCWGG	3 cut(s)	162, 217, 1345
EcoT14I	CCWWGG	2 cut(s)	1119, 1790
EcoT38I	GRGCYC	1 cut(s)	1739
EgeI	GGCGCC	1 cut(s)	1334
EheI	GGCGCC	1 cut(s)	1334
ErhI	CCWWGG	2 cut(s)	1119, 1790
Esp3I	CGTCTC	1 cut(s)	316
FaeI	CATG	8 cut(s)	553, 560, 763, 784, 1031, 1058, 1397, 1748
FalI	AAGNNNNNCTT	2 cut(s)	1490, 1522
FatI	CATG	8 cut(s)	549, 556, 759, 780, 1027, 1054, 1393, 1744
FauNDI	CATATG	1 cut(s)	817
FbaI	TGATCA	2 cut(s)	762, 1030
FblI	GTMKAC	1 cut(s)	868
Fnu4HI	GCNGC	2 cut(s)	197, 1414
FokI	GGATG	5 cut(s)	644, 729, 1382, 1388, 1489
FriOI	GRGCYC	1 cut(s)	1739
Fsp4HI	GCNGC	2 cut(s)	197, 1414
FspBI	CTAG	5 cut(s)	405, 642, 681, 713, 1791
GlaI	GCGC	4 cut(s)	456, 893, 1334, 1757
GluI	GCNGC	2 cut(s)	197, 1414
GsaI	CCCAGC	1 cut(s)	100
GsuI	CTGGAG	2 cut(s)	152, 916
HaeII	RGCGCY	1 cut(s)	1336
HaeIII	GGCC	5 cut(s)	162, 699, 1124, 1622, 1717
HapII	CCGG	3 cut(s)	319, 1282, 1637
HgaI	GACGC	1 cut(s)	716
HhaI	GCGC	4 cut(s)	457, 894, 1335, 1758
Hin1I	GRCGYC	1 cut(s)	1333
Hin1II	CATG	8 cut(s)	553, 560, 763, 784, 1031, 1058, 1397, 1748
Hin6I	GCGC	4 cut(s)	455, 892, 1333, 1756
HinP1I	GCGC	4 cut(s)	455, 892, 1333, 1756
HincII	GTYRAC	2 cut(s)	312, 1324
HindII	GTYRAC	2 cut(s)	312, 1324
HpaI	GTTAAC	1 cut(s)	312
HpaII	CCGG	3 cut(s)	319, 1282, 1637
HphI	GGTGA	6 cut(s)	155, 245, 494, 1309, 1335, 1574
Hpy166II	GTNNAC	8 cut(s)	73, 312, 731, 869, 1180, 1324, 1409, 1828
Hpy188III	TCNNGA	9 cut(s)	212, 746, 852, 1164, 1214, 1367, 1394, 1631, 1740
Hpy8I	GTNNAC	8 cut(s)	73, 312, 731, 869, 1180, 1324, 1409, 1828
Hpy99I	CGWCG	1 cut(s)	1407
HpyAV	CCTTC	7 cut(s)	113, 140, 182, 272, 581, 1288, 1462
HpyCH4III	ACNGT	4 cut(s)	801, 1196, 1321, 1835
HpyCH4IV	ACGT	5 cut(s)	529, 833, 865, 871, 1612
HpyCH4V	TGCA	6 cut(s)	31, 428, 628, 944, 976, 1015
HpyF10VI	GCNNNNNNNGC	3 cut(s)	461, 792, 1469
HpyF3I	CTNAG	8 cut(s)	138, 357, 858, 1049, 1215, 1464, 1710, 1719
HpySE526I	ACGT	5 cut(s)	529, 833, 865, 871, 1612
Hsp92I	GRCGYC	1 cut(s)	1333
Hsp92II	CATG	8 cut(s)	553, 560, 763, 784, 1031, 1058, 1397, 1748
HspAI	GCGC	4 cut(s)	455, 892, 1333, 1756
KasI	GGCGCC	1 cut(s)	1332
Ksp22I	TGATCA	2 cut(s)	762, 1030
KspAI	GTTAAC	1 cut(s)	312
LmnI	GCTCC	5 cut(s)	133, 193, 553, 591, 709
LweI	GCATC	2 cut(s)	18, 1703
MabI	ACCWGGT	1 cut(s)	1345
MaeI	CTAG	5 cut(s)	405, 642, 681, 713, 1791
MaeII	ACGT	5 cut(s)	529, 833, 865, 871, 1612
MaeIII	GTNAC	4 cut(s)	449, 530, 838, 1198
MflI	RGATCY	6 cut(s)	344, 569, 854, 1520, 1540, 1627
MhlI	GDGCHC	2 cut(s)	84, 1739
MluCI	AATT	6 cut(s)	977, 984, 1129, 1267, 1487, 1764
Mly113I	GGCGCC	1 cut(s)	1333
MmeI	TCCRAC	1 cut(s)	1535
MseI	TTAA	7 cut(s)	311, 396, 675, 983, 1188, 1278, 1731
MslI	CAYNNNNRTG	2 cut(s)	543, 836
MspA1I	CMGCKG	2 cut(s)	464, 1537
MspI	CCGG	3 cut(s)	319, 1282, 1637
MspR9I	CCNGG	3 cut(s)	164, 219, 1347
Mva1269I	GAATGC	2 cut(s)	457, 1465
MvaI	CCWGG	3 cut(s)	164, 219, 1347
MvnI	CGCG	2 cut(s)	199, 455
MwoI	GCNNNNNNNGC	3 cut(s)	461, 792, 1469
NarI	GGCGCC	1 cut(s)	1333
NdeI	CATATG	1 cut(s)	817
NlaIII	CATG	8 cut(s)	553, 560, 763, 784, 1031, 1058, 1397, 1748
NlaIV	GGNNCC	7 cut(s)	20, 135, 195, 346, 700, 1334, 1716
NmeAIII	GCCGAG	1 cut(s)	1507
NmuCI	GTSAC	1 cut(s)	838
OliI	CACNNNNGTG	1 cut(s)	836
PaeR7I	CTCGAG	1 cut(s)	1437
PagI	TCATGA	1 cut(s)	1393
PcsI	WCGNNNNNNNCGW	1 cut(s)	114
PctI	GAATGC	2 cut(s)	457, 1465
PfeI	GAWTC	7 cut(s)	242, 560, 718, 848, 1065, 1160, 1300
PflFI	GACNNNGTC	1 cut(s)	1746
PflMI	CCANNNNNTGG	1 cut(s)	253
PfoI	TCCNGGA	1 cut(s)	217
PkrI	GCNGC	2 cut(s)	198, 1415
PluTI	GGCGCC	1 cut(s)	1336
Ppu21I	YACGTR	1 cut(s)	1613
PshAI	GACNNNNGTC	1 cut(s)	603
PshBI	ATTAAT	1 cut(s)	983
Psp6I	CCWGG	3 cut(s)	162, 217, 1345
PspFI	CCCAGC	1 cut(s)	96
PspGI	CCWGG	3 cut(s)	162, 217, 1345
PspN4I	GGNNCC	7 cut(s)	20, 135, 195, 346, 700, 1334, 1716
PspPI	GGNCC	4 cut(s)	160, 698, 1620, 1715
PspXI	VCTCGAGB	1 cut(s)	1437
PstI	CTGCAG	1 cut(s)	430
PstNI	CAGNNNCTG	1 cut(s)	293
PsuI	RGATCY	6 cut(s)	344, 569, 854, 1520, 1540, 1627
PsyI	GACNNNGTC	1 cut(s)	1746
PvuII	CAGCTG	1 cut(s)	1537
RsaI	GTAC	2 cut(s)	468, 1181
RsaNI	GTAC	2 cut(s)	467, 1180
RseI	CAYNNNNRTG	2 cut(s)	543, 836
SaqAI	TTAA	7 cut(s)	311, 396, 675, 983, 1188, 1278, 1731
SatI	GCNGC	2 cut(s)	197, 1414
Sau96I	GGNCC	4 cut(s)	160, 698, 1620, 1715
ScrFI	CCNGG	3 cut(s)	164, 219, 1347
SduI	GDGCHC	2 cut(s)	84, 1739
SexAI	ACCWGGT	1 cut(s)	1345
SfaNI	GCATC	2 cut(s)	18, 1703
SfcI	CTRYAG	1 cut(s)	426
SfoI	GGCGCC	1 cut(s)	1334
Sfr274I	CTCGAG	1 cut(s)	1437
SlaI	CTCGAG	1 cut(s)	1437
SmiMI	CAYNNNNRTG	2 cut(s)	543, 836
SmlI	CTYRAG	2 cut(s)	1437, 1751
SmoI	CTYRAG	2 cut(s)	1437, 1751
Sse9I	AATT	6 cut(s)	977, 984, 1129, 1267, 1487, 1764
SsiI	CCGC	4 cut(s)	197, 462, 793, 1414
SspDI	GGCGCC	1 cut(s)	1332
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	5 cut(s)	405, 642, 681, 713, 1791
StyD4I	CCNGG	3 cut(s)	162, 217, 1345
StyI	CCWWGG	2 cut(s)	1119, 1790
TaaI	ACNGT	4 cut(s)	801, 1196, 1321, 1835
TaiI	ACGT	5 cut(s)	532, 836, 868, 874, 1615
TaqI	TCGA	6 cut(s)	523, 1165, 1209, 1303, 1422, 1438
TasI	AATT	6 cut(s)	977, 984, 1129, 1267, 1487, 1764
TatI	WGTACW	2 cut(s)	466, 1179
TauI	GCSGC	2 cut(s)	199, 1416
TfiI	GAWTC	7 cut(s)	242, 560, 718, 848, 1065, 1160, 1300
Tru1I	TTAA	7 cut(s)	311, 396, 675, 983, 1188, 1278, 1731
Tru9I	TTAA	7 cut(s)	311, 396, 675, 983, 1188, 1278, 1731
TscAI	CASTG	4 cut(s)	298, 1017, 1324, 1840
TseFI	GTSAC	1 cut(s)	838
Tsp45I	GTSAC	1 cut(s)	838
TspRI	CASTG	4 cut(s)	298, 1017, 1324, 1840
Tth111I	GACNNNGTC	1 cut(s)	1746
Van91I	CCANNNNNTGG	1 cut(s)	253
VspI	ATTAAT	1 cut(s)	983
XagI	CCTNNNNNAGG	1 cut(s)	216
XapI	RAATTY	2 cut(s)	1129, 1487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1343
XhoI	CTCGAG	1 cut(s)	1437
XmaJI	CCTAGG	1 cut(s)	1790
XmiI	GTMKAC	1 cut(s)	868
XspI	CTAG	5 cut(s)	405, 642, 681, 713, 1791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.