AT5G64370

Carbon-nitrogen hydrolase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
25739131 .. 25741222
2092 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G64370.1

Sequence Viewer

Length: 1227 bp
ATGGATCATATGATATCAGAAAACGGAGAAACAAGTGCCGAAGGATCGATTTGCGGCTATGATTCGCTGCATCAACTCTTATCAGCGAATCTTAAGCCCGAGCTCTATCAGGAGGTAAACCGGTTGCTCCTTGGACGTAACTGTGGGAGATCGCTTGAACAGATTGTTCTGCCGGAGTCTGCTAAAGCCTTGTCTTCAAAACATGATTTTGATCTCCAGGCTGCTAGCTTTTCAGCTGATAAAGAGCAAATGAGAAATCCTCGAGTGGTCAGAGTTGGTCTCATTCAAAACTCCATTGCTCTTCCAACCACTGCTCCATTCTCGGACCAAACAAGAGGAATATTCGACAAGTTGAAGCCGATAATCGATGCTGCGGGTGTTGCTGGTGTTAACATACTGTGCTTGCAGGAAGCTTGGACCATGCCATTTGCATTTTGCACTAGGGAGAGGAGATGGTGTGAGTTTGCAGAGCCTGTTGATGGCGAATCGACAAAGTTTCTTCAAGAACTCGCTAAAAAGTATAACATGGTGATTGTTAGTCCTATTCTCGAAAGAGATATTGATCACGGTGAAGTGCTTTGGAATACCGCTGTGATTATAGGGAATAATGGAAATATCATTGGCAAGCATCGAAAGAACCATATACCTAGGGTAGGAGATTTCAACGAGAGCACCTATTACATGGAAGGAGACACAGGCCATCCTGTGTTTGAGACGGTGTTTGGGAAAATTGCGGTTAATATATGTTATGGCAGACACCATCCTCTGAATTGGTTAGCTTTTGGTCTAAATGGTGCAGAGATTGTCTTCAACCCTTCAGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCTATTGAGGCACGAAATGCCGCAATAGCAAACAGTTACTTTGTTGGATCCATTAACCGAGTTGGAACCGAAGTATTCCCCAATCCTTTTACGTCAGGTGATGGAAAACCGCAACACAATGATTTCGGGCATTTCTATGGGTCAAGCCATTTTTCTGCACCAGATGCTTCTTGCACACCGTCTTTGTCCCGTTACAAAGATGGTTTATTGATCTCGGACATGGATCTCAATCTCTGCCGGCAATACAAGGACAAGTGGGGATTTAGAATGACTGCAAGATACGAAGTCTATGCCGATCTTTTGGCAAAGTACATAAAGCCAGACTTCAAGCCTCAAGTCGTCTCTGACCCATTGCTCCACAAGAATTCTACATAA

Protein Analysis

408

Amino Acids

45.55

Weight (kDa)

5.92

Isoelectric Point (pI)

36.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CN_hydrolase PF00795 93 - 367 1.9e-56 Carbon-nitrogen hydrolase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015198)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G64370
fragaria_vesca FvH4_2g11570
malus_domestica MD05G1048000.v1.1 MD10G1054600.v1.1
prunus_persica Prupe.8G070200_v2.0.a1
pyrus_communis pycom10g04150
rosa_chinensis RchiOBHm_Chr6g0270931
rosa_laevigata RLG00000013759
rosa_multiflora Rmu_sc0010958.1_g000001
rosa_roxburghii Rroxscaffold_7G00197490
rosa_rugosa Rorug06G0057300
rosa_samantha Rh6AG176900 Rh6BG180200 Rh6CG176300 Rh6DG168500
rosa_wichuraiana Rw6G015070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 6 cut(s) 54, 374, 588, 734, 873, 962
AclWI GGATC 5 cut(s) 12, 52, 894, 907, 1083
AcsI RAATTY 1 cut(s) 1216
AcuI CTGAAG 1 cut(s) 801
AfaI GTAC 1 cut(s) 1163
AfiI CCNNNNNNNGG 2 cut(s) 479, 653
AflII CTTAAG 1 cut(s) 92
AgeI ACCGGT 1 cut(s) 120
AgsI TTSAA 8 cut(s) 158, 198, 287, 355, 503, 664, 811, 1180
AjnI CCWGG 1 cut(s) 216
AluBI AGCT 5 cut(s) 103, 228, 236, 413, 779
AluI AGCT 5 cut(s) 103, 228, 236, 413, 779
Alw21I GWGCWC 2 cut(s) 105, 674
Alw26I GTCTC 4 cut(s) 284, 684, 707, 1198
AlwI GGATC 5 cut(s) 12, 52, 894, 907, 1083
AlwNI CAGNNNCTG 2 cut(s) 473, 824
Ama87I CYCGRG 2 cut(s) 98, 261
AoxI GGCC 2 cut(s) 697, 851
ApeKI GCWGC 3 cut(s) 67, 221, 371
ApoI RAATTY 1 cut(s) 1216
AsiGI ACCGGT 1 cut(s) 120
AspA2I CCTAGG 1 cut(s) 647
AspS9I GGNCC 2 cut(s) 325, 417
AsuHPI GGTGA 4 cut(s) 541, 581, 842, 962
AsuNHI GCTAGC 1 cut(s) 224
AvaI CYCGRG 2 cut(s) 98, 261
AvaII GGWCC 2 cut(s) 325, 417
AvrII CCTAGG 1 cut(s) 647
BamHI GGATCC 1 cut(s) 899
BanII GRGCYC 1 cut(s) 105
BbsI GAAGAC 2 cut(s) 186, 799
Bbv12I GWGCWC 2 cut(s) 105, 674
BbvI GCAGC 3 cut(s) 54, 208, 358
BccI CCATC 6 cut(s) 447, 473, 708, 768, 947, 1046
BcgI CGANNNNNNTGC 2 cut(s) 1124, 1158
BciT130I CCWGG 1 cut(s) 218
BclI TGATCA 1 cut(s) 562
BcoDI GTCTC 4 cut(s) 284, 684, 707, 1198
BfaI CTAG 3 cut(s) 225, 441, 648
BfrI CTTAAG 1 cut(s) 92
BisI GCNGC 5 cut(s) 55, 68, 222, 372, 873
BlnI CCTAGG 1 cut(s) 647
BlsI GCNGC 5 cut(s) 56, 69, 223, 373, 874
Bme1390I CCNGG 1 cut(s) 218
Bme18I GGWCC 2 cut(s) 325, 417
BmeT110I CYCGRG 2 cut(s) 98, 261
BmgT120I GGNCC 2 cut(s) 325, 417
BmiI GGNNCC 2 cut(s) 901, 919
BmrFI CCNGG 1 cut(s) 218
BmsI GCATC 4 cut(s) 79, 358, 637, 1006
BmtI GCTAGC 1 cut(s) 228
BpiI GAAGAC 2 cut(s) 186, 799
BplI GAGNNNNNCTC 4 cut(s) 244, 276, 264, 296
BpmI CTGGAG 1 cut(s) 200
BpuEI CTTGAG 1 cut(s) 1170
Bsa29I ATCGAT 2 cut(s) 47, 366
BsaBI GATNNNNATC 3 cut(s) 210, 561, 1080
BsaI GGTCTC 1 cut(s) 284
BsaJI CCNNGG 2 cut(s) 130, 647
BsaWI WCCGGW 1 cut(s) 120
BsaXI ACNNNNNCTCC 4 cut(s) 298, 328, 442, 472
Bsc4I CCNNNNNNNGG 2 cut(s) 479, 653
Bse118I RCCGGY 2 cut(s) 120, 1089
Bse3DI GCAATG 2 cut(s) 294, 1202
Bse8I GATNNNNATC 3 cut(s) 210, 561, 1080
BseBI CCWGG 1 cut(s) 218
BseCI ATCGAT 2 cut(s) 47, 366
BseDI CCNNGG 2 cut(s) 130, 647
BseGI GGATG 2 cut(s) 700, 760
BseJI GATNNNNATC 3 cut(s) 210, 561, 1080
BseLI CCNNNNNNNGG 2 cut(s) 479, 653
BseMI GCAATG 2 cut(s) 294, 1202
BseMII CTCAG 1 cut(s) 850
BseRI GAGGAG 1 cut(s) 463
BseXI GCAGC 3 cut(s) 54, 208, 358
BsgI GTGCAG 2 cut(s) 816, 993
BshFI GGCC 2 cut(s) 699, 853
BshTI ACCGGT 1 cut(s) 120
BshVI ATCGAT 2 cut(s) 47, 366
BsiHKAI GWGCWC 2 cut(s) 105, 674
BsiHKCI CYCGRG 2 cut(s) 98, 261
BsiSI CCGG 3 cut(s) 121, 173, 1090
BslFI GGGAC 1 cut(s) 1024
BslI CCNNNNNNNGG 2 cut(s) 479, 653
BsmAI GTCTC 4 cut(s) 284, 684, 707, 1198
BsmBI CGTCTC 2 cut(s) 707, 1198
BsmFI GGGAC 1 cut(s) 1024
BsnI GGCC 2 cut(s) 699, 853
Bso31I GGTCTC 1 cut(s) 284
BsoBI CYCGRG 2 cut(s) 98, 261
Bsp1286I GDGCHC 2 cut(s) 105, 674
Bsp143I GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
BspACI CCGC 6 cut(s) 54, 374, 588, 734, 873, 962
BspANI GGCC 2 cut(s) 699, 853
BspCNI CTCAG 1 cut(s) 849
BspDI ATCGAT 2 cut(s) 47, 366
BspLI GGNNCC 2 cut(s) 901, 919
BspOI GCTAGC 1 cut(s) 228
BspPI GGATC 5 cut(s) 12, 52, 894, 907, 1083
BspQI GCTCTTC 1 cut(s) 306
BspTI CTTAAG 1 cut(s) 92
BspTNI GGTCTC 1 cut(s) 284
BsrDI GCAATG 2 cut(s) 294, 1202
BsrFI RCCGGY 2 cut(s) 120, 1089
BssAI RCCGGY 2 cut(s) 120, 1089
BssECI CCNNGG 2 cut(s) 130, 647
BssMI GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
BssT1I CCWWGG 2 cut(s) 130, 647
Bst2UI CCWGG 1 cut(s) 218
Bst4CI ACNGT 7 cut(s) 143, 399, 569, 718, 826, 887, 1032
Bst6I CTCTTC 1 cut(s) 306
BstAFI CTTAAG 1 cut(s) 92
BstAPI GCANNNNNTGC 2 cut(s) 869, 1016
BstC8I GCNNGC 4 cut(s) 226, 404, 626, 1091
BstDEI CTNAG 1 cut(s) 836
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 2 cut(s) 700, 760
BstKTI GATC 9 cut(s) 7, 47, 152, 214, 565, 902, 1065, 1078, 1150
BstMAI GTCTC 4 cut(s) 284, 684, 707, 1198
BstMBI GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
BstMWI GCNNNNNNNGC 4 cut(s) 380, 869, 878, 1016
BstNI CCWGG 1 cut(s) 218
BstSCI CCNGG 1 cut(s) 216
BstV1I GCAGC 3 cut(s) 54, 208, 358
BstV2I GAAGAC 2 cut(s) 186, 799
BstX2I RGATCY 2 cut(s) 899, 1075
BstYI RGATCY 2 cut(s) 899, 1075
Bsu15I ATCGAT 2 cut(s) 47, 366
BsuRI GGCC 2 cut(s) 699, 853
BsuTUI ATCGAT 2 cut(s) 47, 366
BtsCI GGATG 2 cut(s) 700, 760
BtsI GCAGTG 1 cut(s) 309
BtsIMutI CAGTG 2 cut(s) 309, 844
Cac8I GCNNGC 4 cut(s) 226, 404, 626, 1091
CaiI CAGNNNCTG 2 cut(s) 473, 824
Cfr10I RCCGGY 2 cut(s) 120, 1089
Cfr13I GGNCC 2 cut(s) 325, 417
ClaI ATCGAT 2 cut(s) 47, 366
Csp6I GTAC 1 cut(s) 1162
CspAI ACCGGT 1 cut(s) 120
CviAII CATG 5 cut(s) 203, 421, 526, 682, 1072
CviQI GTAC 1 cut(s) 1162
DdeI CTNAG 1 cut(s) 836
DpnI GATC 9 cut(s) 6, 46, 151, 213, 564, 901, 1064, 1077, 1149
DpnII GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
Eam1104I CTCTTC 1 cut(s) 306
EarI CTCTTC 1 cut(s) 306
Ecl136II GAGCTC 1 cut(s) 103
Eco130I CCWWGG 2 cut(s) 130, 647
Eco24I GRGCYC 1 cut(s) 105
Eco31I GGTCTC 1 cut(s) 284
Eco32I GATATC 1 cut(s) 15
Eco47I GGWCC 2 cut(s) 325, 417
Eco53kI GAGCTC 1 cut(s) 103
Eco57I CTGAAG 1 cut(s) 801
Eco88I CYCGRG 2 cut(s) 98, 261
EcoICRI GAGCTC 1 cut(s) 103
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoRI GAATTC 1 cut(s) 1216
EcoRII CCWGG 1 cut(s) 216
EcoRV GATATC 1 cut(s) 15
EcoT14I CCWWGG 2 cut(s) 130, 647
EcoT38I GRGCYC 1 cut(s) 105
ErhI CCWWGG 2 cut(s) 130, 647
Esp3I CGTCTC 2 cut(s) 707, 1198
FaeI CATG 5 cut(s) 206, 424, 529, 685, 1075
FalI AAGNNNNNCTT 2 cut(s) 1160, 1192
FaqI GGGAC 1 cut(s) 1024
FatI CATG 5 cut(s) 202, 420, 525, 681, 1071
FauI CCCGC 1 cut(s) 367
FauNDI CATATG 1 cut(s) 9
FbaI TGATCA 1 cut(s) 562
Fnu4HI GCNGC 5 cut(s) 55, 68, 222, 372, 873
FokI GGATG 2 cut(s) 687, 747
FriOI GRGCYC 1 cut(s) 105
Fsp4HI GCNGC 5 cut(s) 55, 68, 222, 372, 873
FspBI CTAG 3 cut(s) 225, 441, 648
GluI GCNGC 5 cut(s) 55, 68, 222, 372, 873
GsuI CTGGAG 1 cut(s) 200
HaeIII GGCC 2 cut(s) 699, 853
HapII CCGG 3 cut(s) 121, 173, 1090
Hin1II CATG 5 cut(s) 206, 424, 529, 685, 1075
HincII GTYRAC 1 cut(s) 391
HindII GTYRAC 1 cut(s) 391
HindIII AAGCTT 1 cut(s) 411
HinfI GANTC 4 cut(s) 62, 88, 176, 485
HpaI GTTAAC 1 cut(s) 391
HpaII CCGG 3 cut(s) 121, 173, 1090
HphI GGTGA 4 cut(s) 541, 581, 842, 962
Hpy166II GTNNAC 4 cut(s) 118, 391, 833, 842
Hpy188I TCNGA 6 cut(s) 19, 272, 325, 768, 1069, 1198
Hpy188III TCNNGA 3 cut(s) 110, 503, 548
Hpy8I GTNNAC 4 cut(s) 118, 391, 833, 842
HpyAV CCTTC 3 cut(s) 35, 680, 825
HpyCH4III ACNGT 7 cut(s) 143, 399, 569, 718, 826, 887, 1032
HpyCH4IV ACGT 2 cut(s) 136, 944
HpyCH4V TGCA 9 cut(s) 70, 406, 431, 438, 467, 797, 1010, 1026, 1127
HpyF10VI GCNNNNNNNGC 4 cut(s) 380, 869, 878, 1016
HpyF3I CTNAG 1 cut(s) 836
HpySE526I ACGT 2 cut(s) 136, 944
Hsp92II CATG 5 cut(s) 206, 424, 529, 685, 1075
KroI GCCGGC 1 cut(s) 1089
KroNI GCCGGC 1 cut(s) 1091
Ksp22I TGATCA 1 cut(s) 562
KspAI GTTAAC 1 cut(s) 391
Kzo9I GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 3 cut(s) 132, 319, 1212
Lsp1109I GCAGC 3 cut(s) 54, 208, 358
LweI GCATC 4 cut(s) 79, 358, 637, 1006
MaeI CTAG 3 cut(s) 225, 441, 648
MaeII ACGT 2 cut(s) 136, 944
MaeIII GTNAC 3 cut(s) 137, 887, 1043
MalI GATC 9 cut(s) 6, 46, 151, 213, 564, 901, 1064, 1077, 1149
MboI GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
MboII GAAGA 4 cut(s) 186, 293, 491, 799
MflI RGATCY 2 cut(s) 899, 1075
MhlI GDGCHC 2 cut(s) 105, 674
MluCI AATT 3 cut(s) 729, 769, 1216
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 3 cut(s) 329, 877, 895
MnlI CCTC 7 cut(s) 106, 270, 329, 441, 774, 853, 1194
MroNI GCCGGC 1 cut(s) 1089
MseI TTAA 4 cut(s) 93, 390, 738, 906
MslI CAYNNNNRTG 1 cut(s) 987
MspA1I CMGCKG 2 cut(s) 236, 590
MspCI CTTAAG 1 cut(s) 92
MspI CCGG 3 cut(s) 121, 173, 1090
MspR9I CCNGG 1 cut(s) 218
MvaI CCWGG 1 cut(s) 218
MwoI GCNNNNNNNGC 4 cut(s) 380, 869, 878, 1016
NaeI GCCGGC 1 cut(s) 1091
NdeI CATATG 1 cut(s) 9
NdeII GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
NgoMIV GCCGGC 1 cut(s) 1089
NheI GCTAGC 1 cut(s) 224
NlaIII CATG 5 cut(s) 206, 424, 529, 685, 1075
NlaIV GGNNCC 2 cut(s) 901, 919
PaeR7I CTCGAG 1 cut(s) 261
PciSI GCTCTTC 1 cut(s) 306
PdiI GCCGGC 1 cut(s) 1091
PfeI GAWTC 3 cut(s) 62, 88, 485
PinAI ACCGGT 1 cut(s) 120
PkrI GCNGC 5 cut(s) 56, 69, 223, 373, 874
PleI GAGTC 1 cut(s) 184
PpsI GAGTC 1 cut(s) 184
Psp124BI GAGCTC 1 cut(s) 105
Psp6I CCWGG 1 cut(s) 216
PspGI CCWGG 1 cut(s) 216
PspN4I GGNNCC 2 cut(s) 901, 919
PspPI GGNCC 2 cut(s) 325, 417
PspXI VCTCGAGB 1 cut(s) 261
PstNI CAGNNNCTG 2 cut(s) 473, 824
PsuI RGATCY 2 cut(s) 899, 1075
PvuII CAGCTG 1 cut(s) 236
RsaI GTAC 1 cut(s) 1163
RsaNI GTAC 1 cut(s) 1162
RseI CAYNNNNRTG 1 cut(s) 987
SacI GAGCTC 1 cut(s) 105
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 4 cut(s) 93, 390, 738, 906
SatI GCNGC 5 cut(s) 55, 68, 222, 372, 873
Sau3AI GATC 9 cut(s) 4, 44, 149, 211, 562, 899, 1062, 1075, 1147
Sau96I GGNCC 2 cut(s) 325, 417
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 1 cut(s) 218
SduI GDGCHC 2 cut(s) 105, 674
SfaNI GCATC 4 cut(s) 79, 358, 637, 1006
Sfr274I CTCGAG 1 cut(s) 261
SinI GGWCC 2 cut(s) 325, 417
SlaI CTCGAG 1 cut(s) 261
SmiMI CAYNNNNRTG 1 cut(s) 987
SmlI CTYRAG 3 cut(s) 92, 261, 1185
SmoI CTYRAG 3 cut(s) 92, 261, 1185
Sse9I AATT 3 cut(s) 729, 769, 1216
SsiI CCGC 6 cut(s) 54, 374, 588, 734, 873, 962
SspI AATATT 1 cut(s) 342
SspMI CTAG 3 cut(s) 225, 441, 648
SstI GAGCTC 1 cut(s) 105
StyD4I CCNGG 1 cut(s) 216
StyI CCWWGG 2 cut(s) 130, 647
TaaI ACNGT 7 cut(s) 143, 399, 569, 718, 826, 887, 1032
TaiI ACGT 2 cut(s) 139, 947
TaqI TCGA 7 cut(s) 47, 262, 345, 366, 488, 549, 631
TasI AATT 3 cut(s) 729, 769, 1216
TatI WGTACW 1 cut(s) 1161
TauI GCSGC 2 cut(s) 57, 875
TfiI GAWTC 3 cut(s) 62, 88, 485
Tru1I TTAA 4 cut(s) 93, 390, 738, 906
Tru9I TTAA 4 cut(s) 93, 390, 738, 906
TscAI CASTG 2 cut(s) 316, 844
TseI GCWGC 3 cut(s) 67, 221, 371
TspGWI ACGGA 1 cut(s) 39
TspRI CASTG 2 cut(s) 316, 844
Vha464I CTTAAG 1 cut(s) 92
VpaK11BI GGWCC 2 cut(s) 325, 417
XagI CCTNNNNNAGG 1 cut(s) 651
XapI RAATTY 1 cut(s) 1216
XhoI CTCGAG 1 cut(s) 261
XmaJI CCTAGG 1 cut(s) 647
XspI CTAG 3 cut(s) 225, 441, 648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.