Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0015198

Physical Location & Seq

Genomic Coordinates Forward (+)

10293931 .. 10297726

Gene Structure 3796 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G070200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1257 bp

ATGGAAAAACCAGCCCAAAACACTGACGCCCAAAATGGGCAAGTTCAAGAAGCAACCAAGGCTTCCAGCGACGGTTCTGTTTGTGGGTACGATTCACTTCACCACCTCCTCAGCGAAAATCTCAAGCCCCATCTTTTTCAGGAAGTCAACCGTATTCTTTTGGGTCTGAATCGCGGTAAGGCACTTGAAACAATCTCTCTCCCAGAATCTGCTAAAGCACTCTCTTCAGGACATAATTTTGACCTCCAGGCCTTCTGCTTTCTTGCTGACAAAGAGTTGTTGAGAGAACCTCGAATAGTTAGGGTTGGTCTCATTCAAAACTCTATAGCTCTTCCAACTACTGCTCACTTTTTGGACCAGAAGAGGGCTATTTTTGAGAAATTAAGGCCAATAATTGATGCTGCAGGTGCTGCAGGTGTCAATGTATTATGCTTGCAGGAAGCATGGACAATGCCTTTTGCCTTTTGTACACGGGAGAAGAGGTGGTGTGAATTTGCAGAGCCTGTAGACGGGGAATCAACTCGATTCCTCCAGGATTTTGCACGCATGTACAACATGGTCATTATAAGTCCAATTCTTGAGAGGGATGTCAACCATGGAGAGACTCTCTGGAACACTGCTGTCATAATTGGAAATAATGGGAACATAATTGGCAAGCATCGAAAGAACCATATACCAAGAGTTGGCGACTTCAACGAGAGTACGTATTATATGGAAGGAAATACTGGACATCCAGTCTTTGAGACAGCTTATGGAAAAATTGCTGTTAACATATGCTATGGAAGGCACCATTCTTTAAATTGGTTAGCATTTGGCTTGAATGGTGCAGAGATTGTTTTCAACCCTTCCGCCACTGTTGGTGAACTCAGCGAACCGATGTGGCCCATTGAGGCCCGTAATGCTGCAATTGCAAACAGTTACTTTGTTGGGTCAATCAACCGTGTAGGGACTGAGGTTTTTCCAAATCCATTTACTTCCGGTGATGGAAAGCCGGAACATGCAGATTTCGGGCATTTCTACGGATCCAGCCATTTTTCAGCCCCAGATGCCTCGTGCACTCCTTCTCTATCACGCCATAGGGATGGGTTGTTGATCTCAGACGTGGACCTCAACCTGTGTAGGCAGATAAAAGACAAGTGGGGATTCCGAATGACTGCTCGTTATGAGCTGTATGCTGACTTGCTTGCTCAGTATTTGAAGCCGGATTTTGAGCCCCAAGTCATTTCTGATCCCTTGTTACACAAGAAGTCTCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003837 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006208 GO:0006212 GO:0006725 GO:0006807 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009605 GO:0009987 GO:0009991 GO:0016787 GO:0016810 GO:0016811 GO:0017144 GO:0019860 GO:0031667 GO:0031668 GO:0031669 GO:0034641 GO:0042737 GO:0043562 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0050896 GO:0051716 GO:0055086 GO:0071496 GO:0071704 GO:0072527 GO:0072529 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00240 ko00410 ko00770 ko00983 ko01100 map00240 map00410 map00770 map00983 map01100

Pfam Domains

Protein Families

CN_hydrolase

Protein Analysis

419

Amino Acids

46.62

Weight (kDa)

6.06

Isoelectric Point (pI)

35.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64370
fragaria_vesca	FvH4_2g11570
malus_domestica	MD05G1048000.v1.1 MD10G1054600.v1.1
prunus_persica	Prupe.8G070200_v2.0.a1
pyrus_communis	pycom10g04150
rosa_chinensis	RchiOBHm_Chr6g0270931
rosa_laevigata	RLG00000013759
rosa_multiflora	Rmu_sc0010958.1_g000001
rosa_roxburghii	Rroxscaffold_7G00197490
rosa_rugosa	Rorug06G0057300
rosa_samantha	Rh6AG176900 Rh6BG180200 Rh6CG176300 Rh6DG168500
rosa_wichuraiana	Rw6G015070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	566
AarI	CACCTGC	2 cut(s)	395, 404
Acc36I	ACCTGC	2 cut(s)	395, 404
AccB1I	GGYRCC	1 cut(s)	786
AccB7I	CCANNNNNTGG	1 cut(s)	683
AccI	GTMKAC	1 cut(s)	507
AccII	CGCG	1 cut(s)	174
AciI	CCGC	2 cut(s)	174, 849
AclWI	GGATC	3 cut(s)	1017, 1030, 1223
AcsI	RAATTY	1 cut(s)	491
AcuI	CTGAAG	1 cut(s)	210
AcyI	GRCGYC	1 cut(s)	27
AfaI	GTAC	4 cut(s)	89, 469, 551, 703
AfiI	CCNNNNNNNGG	4 cut(s)	36, 364, 509, 683
AgsI	TTSAA	7 cut(s)	47, 188, 317, 694, 820, 841, 1198
AhdI	GACNNNNNGTC	1 cut(s)	734
AjiI	CACGTC	1 cut(s)	1102
AjnI	CCWGG	2 cut(s)	246, 531
AluBI	AGCT	3 cut(s)	329, 749, 1168
AluI	AGCT	3 cut(s)	329, 749, 1168
Alw21I	GWGCWC	1 cut(s)	1058
Alw26I	GTCTC	3 cut(s)	314, 596, 737
Alw44I	GTGCAC	1 cut(s)	1054
AlwI	GGATC	3 cut(s)	1017, 1030, 1223
AlwNI	CAGNNNCTG	3 cut(s)	209, 410, 503
AoxI	GGCC	4 cut(s)	249, 386, 881, 891
ApaLI	GTGCAC	1 cut(s)	1054
ApeKI	GCWGC	3 cut(s)	401, 410, 902
ApoI	RAATTY	1 cut(s)	491
AspS9I	GGNCC	4 cut(s)	355, 882, 892, 1105
AsuHPI	GGTGA	3 cut(s)	92, 872, 992
AvaII	GGWCC	2 cut(s)	355, 1105
BaeGI	GKGCMC	1 cut(s)	1058
BamHI	GGATCC	1 cut(s)	1022
BanI	GGYRCC	1 cut(s)	786
BanII	GRGCYC	1 cut(s)	1215
BauI	CACGAG	1 cut(s)	1051
Bbv12I	GWGCWC	1 cut(s)	1058
BbvCI	CCTCAGC	1 cut(s)	110
BbvI	GCAGC	3 cut(s)	388, 397, 889
BccI	CCATC	3 cut(s)	138, 977, 1076
BciT130I	CCWGG	2 cut(s)	248, 533
BcoDI	GTCTC	3 cut(s)	314, 596, 737
BfmI	CTRYAG	4 cut(s)	324, 402, 411, 504
BfuAI	ACCTGC	2 cut(s)	395, 404
BisI	GCNGC	3 cut(s)	402, 411, 903
BlsI	GCNGC	3 cut(s)	403, 412, 904
Bme1390I	CCNGG	2 cut(s)	248, 533
Bme18I	GGWCC	2 cut(s)	355, 1105
BmeRI	GACNNNNNGTC	1 cut(s)	734
BmgBI	CACGTC	1 cut(s)	1102
BmgT120I	GGNCC	4 cut(s)	355, 882, 892, 1105
BmiI	GGNNCC	2 cut(s)	788, 1024
BmrFI	CCNGG	2 cut(s)	248, 533
BmsI	GCATC	3 cut(s)	388, 667, 1036
BplI	GAGNNNNNCTC	4 cut(s)	274, 306, 591, 623
BpmI	CTGGAG	2 cut(s)	230, 515
Bpu10I	CCTNAGC	1 cut(s)	110
BpuEI	CTTGAG	2 cut(s)	107, 599
BsaAI	YACGTR	1 cut(s)	705
BsaHI	GRCGYC	1 cut(s)	27
BsaI	GGTCTC	1 cut(s)	314
BsaJI	CCNNGG	2 cut(s)	57, 595
BsaWI	WCCGGW	1 cut(s)	977
BsaXI	ACNNNNNCTCC	2 cut(s)	467, 497
Bsc4I	CCNNNNNNNGG	4 cut(s)	36, 364, 509, 683
Bse1I	ACTGG	2 cut(s)	730, 734
BseBI	CCWGG	2 cut(s)	248, 533
BseDI	CCNNGG	2 cut(s)	57, 595
BseGI	GGATG	3 cut(s)	592, 730, 1087
BseLI	CCNNNNNNNGG	4 cut(s)	36, 364, 509, 683
BseMII	CTCAG	5 cut(s)	124, 880, 942, 1110, 1202
BseNI	ACTGG	2 cut(s)	730, 734
BseRI	GAGGAG	1 cut(s)	98
BseSI	GKGCMC	1 cut(s)	1058
BseXI	GCAGC	3 cut(s)	388, 397, 889
BsgI	GTGCAG	1 cut(s)	846
Bsh1236I	CGCG	1 cut(s)	174
BshFI	GGCC	4 cut(s)	251, 388, 883, 893
BshNI	GGYRCC	1 cut(s)	786
BsiHKAI	GWGCWC	1 cut(s)	1058
BsiSI	CCGG	3 cut(s)	978, 992, 1202
BslFI	GGGAC	1 cut(s)	961
BslI	CCNNNNNNNGG	4 cut(s)	36, 364, 509, 683
BsmAI	GTCTC	3 cut(s)	314, 596, 737
BsmFI	GGGAC	1 cut(s)	961
BsnI	GGCC	4 cut(s)	251, 388, 883, 893
Bso31I	GGTCTC	1 cut(s)	314
Bsp1286I	GDGCHC	2 cut(s)	1058, 1215
Bsp1407I	TGTACA	2 cut(s)	467, 549
Bsp143I	GATC	3 cut(s)	1022, 1092, 1228
Bsp19I	CCATGG	1 cut(s)	595
BspACI	CCGC	2 cut(s)	174, 849
BspANI	GGCC	4 cut(s)	251, 388, 883, 893
BspCNI	CTCAG	5 cut(s)	123, 879, 943, 1109, 1201
BspFNI	CGCG	1 cut(s)	174
BspLI	GGNNCC	2 cut(s)	788, 1024
BspMAI	CTGCAG	2 cut(s)	406, 415
BspMI	ACCTGC	2 cut(s)	395, 404
BspPI	GGATC	3 cut(s)	1017, 1030, 1223
BspQI	GCTCTTC	1 cut(s)	336
BspT107I	GGYRCC	1 cut(s)	786
BspTNI	GGTCTC	1 cut(s)	314
BsrGI	TGTACA	2 cut(s)	467, 549
BsrI	ACTGG	2 cut(s)	730, 734
BssECI	CCNNGG	2 cut(s)	57, 595
BssMI	GATC	3 cut(s)	1022, 1092, 1228
BssNI	GRCGYC	1 cut(s)	27
BssSI	CACGAG	1 cut(s)	1051
BssT1I	CCWWGG	2 cut(s)	57, 595
Bst2BI	CACGAG	1 cut(s)	1051
Bst2UI	CCWGG	2 cut(s)	248, 533
Bst4CI	ACNGT	5 cut(s)	74, 152, 856, 917, 941
Bst6I	CTCTTC	4 cut(s)	229, 336, 356, 473
BstACI	GRCGYC	1 cut(s)	27
BstAPI	GCANNNNNTGC	1 cut(s)	410
BstAUI	TGTACA	2 cut(s)	467, 549
BstBAI	YACGTR	1 cut(s)	705
BstC8I	GCNNGC	4 cut(s)	434, 544, 656, 1185
BstDEI	CTNAG	5 cut(s)	110, 866, 951, 1096, 1188
BstDSI	CCRYGG	1 cut(s)	595
BstF5I	GGATG	3 cut(s)	592, 730, 1087
BstFNI	CGCG	1 cut(s)	174
BstKTI	GATC	3 cut(s)	1025, 1095, 1231
BstMAI	GTCTC	3 cut(s)	314, 596, 737
BstMBI	GATC	3 cut(s)	1022, 1092, 1228
BstMWI	GCNNNNNNNGC	6 cut(s)	59, 407, 410, 899, 908, 1046
BstNI	CCWGG	2 cut(s)	248, 533
BstNSI	RCATGY	2 cut(s)	550, 1001
BstSCI	CCNGG	2 cut(s)	246, 531
BstSFI	CTRYAG	4 cut(s)	324, 402, 411, 504
BstSLI	GKGCMC	1 cut(s)	1058
BstSNI	TACGTA	1 cut(s)	705
BstUI	CGCG	1 cut(s)	174
BstV1I	GCAGC	3 cut(s)	388, 397, 889
BstX2I	RGATCY	1 cut(s)	1022
BstXI	CCANNNNNNTGG	1 cut(s)	1082
BstYI	RGATCY	1 cut(s)	1022
BsuRI	GGCC	4 cut(s)	251, 388, 883, 893
BtgI	CCRYGG	1 cut(s)	595
BtrI	CACGTC	1 cut(s)	1102
BtsCI	GGATG	3 cut(s)	592, 730, 1087
BtsI	GCAGTG	1 cut(s)	615
BtsIMutI	CAGTG	3 cut(s)	21, 615, 852
BveI	ACCTGC	2 cut(s)	395, 404
Cac8I	GCNNGC	4 cut(s)	434, 544, 656, 1185
CaiI	CAGNNNCTG	3 cut(s)	209, 410, 503
Cfr13I	GGNCC	4 cut(s)	355, 882, 892, 1105
CseI	GACGC	1 cut(s)	35
Csp6I	GTAC	4 cut(s)	88, 468, 550, 702
CviAII	CATG	5 cut(s)	444, 547, 556, 596, 998
CviQI	GTAC	4 cut(s)	88, 468, 550, 702
DdeI	CTNAG	5 cut(s)	110, 866, 951, 1096, 1188
DpnI	GATC	3 cut(s)	1024, 1094, 1230
DpnII	GATC	3 cut(s)	1022, 1092, 1228
DraI	TTTAAA	1 cut(s)	798
DriI	GACNNNNNGTC	1 cut(s)	734
Eam1104I	CTCTTC	4 cut(s)	229, 336, 356, 473
Eam1105I	GACNNNNNGTC	1 cut(s)	734
EarI	CTCTTC	4 cut(s)	229, 336, 356, 473
EciI	GGCGGA	1 cut(s)	838
Eco105I	TACGTA	1 cut(s)	705
Eco130I	CCWWGG	2 cut(s)	57, 595
Eco147I	AGGCCT	1 cut(s)	251
Eco24I	GRGCYC	1 cut(s)	1215
Eco31I	GGTCTC	1 cut(s)	314
Eco47I	GGWCC	2 cut(s)	355, 1105
Eco57I	CTGAAG	1 cut(s)	210
EcoRII	CCWGG	2 cut(s)	246, 531
EcoT14I	CCWWGG	2 cut(s)	57, 595
EcoT38I	GRGCYC	1 cut(s)	1215
ErhI	CCWWGG	2 cut(s)	57, 595
FaeI	CATG	5 cut(s)	447, 550, 559, 599, 1001
FaqI	GGGAC	1 cut(s)	961
FatI	CATG	5 cut(s)	443, 546, 555, 595, 997
FauNDI	CATATG	1 cut(s)	773
FblI	GTMKAC	1 cut(s)	507
Fnu4HI	GCNGC	3 cut(s)	402, 411, 903
FokI	GGATG	3 cut(s)	599, 717, 1094
FriOI	GRGCYC	1 cut(s)	1215
Fsp4HI	GCNGC	3 cut(s)	402, 411, 903
GluI	GCNGC	3 cut(s)	402, 411, 903
GsuI	CTGGAG	2 cut(s)	230, 515
HaeIII	GGCC	4 cut(s)	251, 388, 883, 893
HapII	CCGG	3 cut(s)	978, 992, 1202
HgaI	GACGC	1 cut(s)	35
Hin1I	GRCGYC	1 cut(s)	27
Hin1II	CATG	5 cut(s)	447, 550, 559, 599, 1001
HincII	GTYRAC	3 cut(s)	148, 592, 769
HindII	GTYRAC	3 cut(s)	148, 592, 769
HinfI	GANTC	7 cut(s)	92, 169, 206, 515, 525, 604, 1143
HpaI	GTTAAC	1 cut(s)	769
HpaII	CCGG	3 cut(s)	978, 992, 1202
HphI	GGTGA	3 cut(s)	92, 872, 992
Hpy166II	GTNNAC	8 cut(s)	148, 470, 508, 592, 769, 863, 1056, 1105
Hpy188I	TCNGA	4 cut(s)	168, 1099, 1148, 1228
Hpy188III	TCNNGA	5 cut(s)	47, 140, 228, 578, 610
Hpy8I	GTNNAC	8 cut(s)	148, 470, 508, 592, 769, 863, 1056, 1105
Hpy99I	CGWCG	1 cut(s)	74
HpyAV	CCTTC	5 cut(s)	262, 710, 777, 855, 1071
HpyCH4III	ACNGT	5 cut(s)	74, 152, 856, 917, 941
HpyCH4IV	ACGT	2 cut(s)	704, 1101
HpyF10VI	GCNNNNNNNGC	6 cut(s)	59, 407, 410, 899, 908, 1046
HpyF3I	CTNAG	5 cut(s)	110, 866, 951, 1096, 1188
HpySE526I	ACGT	2 cut(s)	704, 1101
Hsp92I	GRCGYC	1 cut(s)	27
Hsp92II	CATG	5 cut(s)	447, 550, 559, 599, 1001
KspAI	GTTAAC	1 cut(s)	769
Kzo9I	GATC	3 cut(s)	1022, 1092, 1228
LguI	GCTCTTC	1 cut(s)	336
Lsp1109I	GCAGC	3 cut(s)	388, 397, 889
LweI	GCATC	3 cut(s)	388, 667, 1036
MaeII	ACGT	2 cut(s)	704, 1101
MaeIII	GTNAC	2 cut(s)	917, 1236
MalI	GATC	3 cut(s)	1024, 1094, 1230
MboI	GATC	3 cut(s)	1022, 1092, 1228
MboII	GAAGA	4 cut(s)	216, 323, 373, 490
MfeI	CAATTG	1 cut(s)	906
MflI	RGATCY	1 cut(s)	1022
MhlI	GDGCHC	2 cut(s)	1058, 1215
MlyI	GAGTC	1 cut(s)	598
MmeI	TCCRAC	1 cut(s)	359
MseI	TTAA	3 cut(s)	383, 768, 797
MslI	CAYNNNNRTG	1 cut(s)	1080
MspI	CCGG	3 cut(s)	978, 992, 1202
MspR9I	CCNGG	2 cut(s)	248, 533
MunI	CAATTG	1 cut(s)	906
MvaI	CCWGG	2 cut(s)	248, 533
MvnI	CGCG	1 cut(s)	174
MwoI	GCNNNNNNNGC	6 cut(s)	59, 407, 410, 899, 908, 1046
NcoI	CCATGG	1 cut(s)	595
NdeI	CATATG	1 cut(s)	773
NdeII	GATC	3 cut(s)	1022, 1092, 1228
NlaIII	CATG	5 cut(s)	447, 550, 559, 599, 1001
NlaIV	GGNNCC	2 cut(s)	788, 1024
NspI	RCATGY	2 cut(s)	550, 1001
PaqCI	CACCTGC	2 cut(s)	395, 404
PceI	AGGCCT	1 cut(s)	251
PciSI	GCTCTTC	1 cut(s)	336
PfeI	GAWTC	6 cut(s)	92, 169, 206, 515, 525, 1143
PflMI	CCANNNNNTGG	1 cut(s)	683
PfoI	TCCNGGA	1 cut(s)	531
PkrI	GCNGC	3 cut(s)	403, 412, 904
PleI	GAGTC	1 cut(s)	598
PpsI	GAGTC	1 cut(s)	598
Ppu21I	YACGTR	1 cut(s)	705
PsiI	TTATAA	1 cut(s)	566
Psp6I	CCWGG	2 cut(s)	246, 531
PspGI	CCWGG	2 cut(s)	246, 531
PspN4I	GGNNCC	2 cut(s)	788, 1024
PspPI	GGNCC	4 cut(s)	355, 882, 892, 1105
PstI	CTGCAG	2 cut(s)	406, 415
PstNI	CAGNNNCTG	3 cut(s)	209, 410, 503
PsuI	RGATCY	1 cut(s)	1022
RsaI	GTAC	4 cut(s)	89, 469, 551, 703
RsaNI	GTAC	4 cut(s)	88, 468, 550, 702
RseI	CAYNNNNRTG	1 cut(s)	1080
SapI	GCTCTTC	1 cut(s)	336
SaqAI	TTAA	3 cut(s)	383, 768, 797
SatI	GCNGC	3 cut(s)	402, 411, 903
Sau3AI	GATC	3 cut(s)	1022, 1092, 1228
Sau96I	GGNCC	4 cut(s)	355, 882, 892, 1105
SchI	GAGTC	1 cut(s)	598
ScrFI	CCNGG	2 cut(s)	248, 533
SduI	GDGCHC	2 cut(s)	1058, 1215
SfaNI	GCATC	3 cut(s)	388, 667, 1036
SfcI	CTRYAG	4 cut(s)	324, 402, 411, 504
SinI	GGWCC	2 cut(s)	355, 1105
SmiMI	CAYNNNNRTG	1 cut(s)	1080
SmlI	CTYRAG	2 cut(s)	122, 578
SmoI	CTYRAG	2 cut(s)	122, 578
SnaBI	TACGTA	1 cut(s)	705
SseBI	AGGCCT	1 cut(s)	251
SsiI	CCGC	2 cut(s)	174, 849
StuI	AGGCCT	1 cut(s)	251
StyD4I	CCNGG	2 cut(s)	246, 531
StyI	CCWWGG	2 cut(s)	57, 595
TaaI	ACNGT	5 cut(s)	74, 152, 856, 917, 941
TaiI	ACGT	2 cut(s)	707, 1104
TaqI	TCGA	3 cut(s)	292, 523, 661
TatI	WGTACW	2 cut(s)	467, 549
TfiI	GAWTC	6 cut(s)	92, 169, 206, 515, 525, 1143
Tru1I	TTAA	3 cut(s)	383, 768, 797
Tru9I	TTAA	3 cut(s)	383, 768, 797
TscAI	CASTG	3 cut(s)	28, 622, 859
TseI	GCWGC	3 cut(s)	401, 410, 902
TspGWI	ACGGA	1 cut(s)	1035
TspRI	CASTG	3 cut(s)	28, 622, 859
Van91I	CCANNNNNTGG	1 cut(s)	683
VneI	GTGCAC	1 cut(s)	1054
VpaK11BI	GGWCC	2 cut(s)	355, 1105
XapI	RAATTY	1 cut(s)	491
XceI	RCATGY	2 cut(s)	550, 1001
XmiI	GTMKAC	1 cut(s)	507

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.