Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0015198

Physical Location & Seq

Genomic Coordinates Reverse (-)

7780820 .. 7782247

Gene Structure 1428 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0057300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1428 bp

ATGAACTGCAAGCGAATCGAGTCAACCAGATTTTGCGATCTTCCAGATGAAGTTCTGGAACACATTCTTTCCTTCCTTACCATTGAAGACCTCGCTCGAGTCGGTTGTGTTTCGAAAAGATACAGCAAACTTCATCCATCAACTCAGTCATTAAGTTTAGATGAATCCACTGATGCAAGTATTTTCACATGTGACCAGCGGAAACGACTATTGGGTTCCTTGGAGAGGGTCTTGATTCGACGTGGATGTAATAAGCTACAATGCTTTTGGTTTTCTTGGTGCTATCATGATCACGATGAAGGCAAACCAGAAAGCTGCTGCCCCAAGGACCTGAATTCGTGGATGGTCAAGTTTATCGACAATGTGGTAAGGTGTAATGTTGAAGAGCTTCATCTTAAGATAAACCAAGGTATTACACAGGCAGCATACGTGGAATTTCCTGTTGTTCGTTGCAAATCGTTAAAGCATCTATCTGTCAAGGGCATGAAAACAAATATTAAAACACCCCTTAGCTCCGCTTCTTTTTCTAATCTCGAACGCTTGGAGTTGACACTAGTTTGTATACCAGATGAGGGGATTTTCAAATGGATCTCACATTCTTGCAAATGCATCAAGGAATTACGGTTGGAAGACATATATGATTTTCAGAATAACAGTGCTACCATTGAAAGCCCATCTTTGAAATCGTTTACTTTTATTTTGAATAAGGATTATAATTTATCCAATTACAATCTCTATGTCACCTGTGAGAAACTTGAAGACGCATGCATCCTTTTGGGGAAGCCGTGCTACACAGGTAAATATGGTGGAGCGCTATTATTTTCTGCACCAAGTCTTAAAAATTTGAAATGGACTGGACACGTGATGATGTTCCAAAACTTGAGCGAAGTCATGAGTTTAGAAAAAGCTGAGATTGAGCTAGATCCCGGGGTGAAGTTTGACGATGTATTCAATCTGTTTCATGGTATTCGAAGTGTTAAAGTTCTGGATTTATCCGAAAGGACCATGAAGTGTCTGTGCGAGGGAGATTTAACGGCAGAACAACTACAACTACATAATGTTTGTTGTTTAAGAATTCGTGGTTTAAGCTTAATGGATGACGATGTCCACGCTATGGTCTCCCTTTTAAAAAGAATGCCAAACTTGGCTACTTTGCGCATAGAGGCTGGCCGGACTGGAAGCAGATATAGATCATCATCTTATGGCAATATGTCAATCTGGGAGTTGCAAAAGCTTGCTTTACATAACCTAAAGGAGGTGACAATACAGCTTTCCAGTGGAAATAATGGAATCAGCTTTACACAATATCTCCTCCATCACGGTCTACAATTGCAGAAAATGGTCATCTATTATTTACCGGAGCAATCTTATGAAGTCAGGAGGTACAAATGGCCAAGGACTTCGAATGCTAAAGTTGTCTTTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003837 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006208 GO:0006212 GO:0006725 GO:0006807 GO:0007154 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009605 GO:0009987 GO:0009991 GO:0016787 GO:0016810 GO:0016811 GO:0017144 GO:0019860 GO:0031667 GO:0031668 GO:0031669 GO:0034641 GO:0042737 GO:0043562 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0050896 GO:0051716 GO:0055086 GO:0071496 GO:0071704 GO:0072527 GO:0072529 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00240 ko00410 ko00770 ko00983 ko01100 map00240 map00410 map00770 map00983 map01100

Pfam Domains

Protein Families

CN_hydrolase

Protein Analysis

475

Amino Acids

54.51

Weight (kDa)

8.26

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box-like	PF12937	11 - 42	8.9e-09	F-box-like
F-box	PF00646	11 - 41	2.6e-07	F-box domain
LRR_At5g56370	PF24758	121 - 235	1.3e-08	FBD-associated F-box protein At5g56370, LRR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64370
fragaria_vesca	FvH4_2g11570
malus_domestica	MD05G1048000.v1.1 MD10G1054600.v1.1
prunus_persica	Prupe.8G070200_v2.0.a1
pyrus_communis	pycom10g04150
rosa_chinensis	RchiOBHm_Chr6g0270931
rosa_laevigata	RLG00000013759
rosa_multiflora	Rmu_sc0010958.1_g000001
rosa_roxburghii	Rroxscaffold_7G00197490
rosa_rugosa	Rorug06G0057300
rosa_samantha	Rh6AG176900 Rh6BG180200 Rh6CG176300 Rh6DG168500
rosa_wichuraiana	Rw6G015070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	714
Acc16I	TGCGCA	1 cut(s)	1157
AccB7I	CCANNNNNTGG	1 cut(s)	1114
AccI	GTMKAC	2 cut(s)	562, 1324
AciI	CCGC	2 cut(s)	199, 516
AclWI	GGATC	2 cut(s)	596, 917
AcoI	YGGCCR	2 cut(s)	1168, 1391
AcsI	RAATTY	4 cut(s)	334, 434, 841, 1074
AcvI	CACGTG	1 cut(s)	862
AfaI	GTAC	1 cut(s)	1385
AfeI	AGCGCT	1 cut(s)	813
AfiI	CCNNNNNNNGG	4 cut(s)	225, 572, 1114, 1255
AflII	CTTAAG	1 cut(s)	395
AflIII	ACRYGT	2 cut(s)	188, 859
AgsI	TTSAA	9 cut(s)	86, 383, 583, 668, 682, 703, 758, 847, 952
AhlI	ACTAGT	1 cut(s)	553
AjiI	CACGTC	1 cut(s)	242
AjuI	GAANNNNNNNTTGG	2 cut(s)	194, 226
Alw26I	GTCTC	1 cut(s)	1123
AlwI	GGATC	2 cut(s)	596, 917
Ama87I	CYCGRG	2 cut(s)	96, 926
Aor51HI	AGCGCT	1 cut(s)	813
AoxI	GGCC	2 cut(s)	1168, 1391
ApeKI	GCWGC	3 cut(s)	315, 318, 422
ApoI	RAATTY	4 cut(s)	334, 434, 841, 1074
Asp700I	GAANNNNTTC	2 cut(s)	63, 387
AspLEI	GCGC	2 cut(s)	814, 1158
AspS9I	GGNCC	2 cut(s)	328, 1002
AsuC2I	CCSGG	2 cut(s)	927, 928
AsuHPI	GGTGA	3 cut(s)	733, 943, 1270
AsuII	TTCGAA	3 cut(s)	113, 970, 1403
AvaI	CYCGRG	2 cut(s)	96, 926
AvaII	GGWCC	2 cut(s)	328, 1002
BalI	TGGCCA	1 cut(s)	1393
BarI	GAAGNNNNNNTAC	2 cut(s)	773, 805
BbrPI	CACGTG	1 cut(s)	862
BbsI	GAAGAC	3 cut(s)	93, 636, 765
BbvI	GCAGC	3 cut(s)	302, 305, 434
BccI	CCATC	4 cut(s)	145, 337, 682, 1323
BceAI	ACGGC	2 cut(s)	769, 1050
BcgI	CGANNNNNNTGC	1 cut(s)	32
BclI	TGATCA	1 cut(s)	289
BcnI	CCSGG	2 cut(s)	927, 928
BcoDI	GTCTC	1 cut(s)	1123
BcuI	ACTAGT	1 cut(s)	553
BfaI	CTAG	2 cut(s)	554, 920
BfoI	RGCGCY	1 cut(s)	815
BfrI	CTTAAG	1 cut(s)	395
BisI	GCNGC	3 cut(s)	316, 319, 423
BlsI	GCNGC	3 cut(s)	317, 320, 424
Bme1390I	CCNGG	2 cut(s)	927, 928
Bme18I	GGWCC	2 cut(s)	328, 1002
BmeT110I	CYCGRG	2 cut(s)	96, 926
BmgBI	CACGTC	1 cut(s)	242
BmgT120I	GGNCC	2 cut(s)	328, 1002
BmiI	GGNNCC	1 cut(s)	217
BmrFI	CCNGG	2 cut(s)	927, 928
BmsI	GCATC	4 cut(s)	163, 475, 618, 777
BpiI	GAAGAC	3 cut(s)	93, 636, 765
Bpu10I	CCTNAGC	1 cut(s)	509
Bpu14I	TTCGAA	3 cut(s)	113, 970, 1403
BpuEI	CTTGAG	1 cut(s)	901
BpuMI	CCSGG	2 cut(s)	927, 928
BsaAI	YACGTR	2 cut(s)	430, 862
BsaBI	GATNNNNATC	2 cut(s)	1189, 1195
BsaI	GGTCTC	1 cut(s)	1123
BsaJI	CCNNGG	6 cut(s)	219, 324, 406, 926, 927, 1394
BsaWI	WCCGGW	1 cut(s)	1357
BsaXI	ACNNNNNCTCC	2 cut(s)	1293, 1323
Bsc4I	CCNNNNNNNGG	4 cut(s)	225, 572, 1114, 1255
Bse1I	ACTGG	3 cut(s)	859, 1180, 1275
Bse8I	GATNNNNATC	2 cut(s)	1189, 1195
BseDI	CCNNGG	6 cut(s)	219, 324, 406, 926, 927, 1394
BseGI	GGATG	5 cut(s)	133, 251, 348, 768, 1102
BseJI	GATNNNNATC	2 cut(s)	1189, 1195
BseLI	CCNNNNNNNGG	4 cut(s)	225, 572, 1114, 1255
BseMII	CTCAG	2 cut(s)	158, 900
BseNI	ACTGG	3 cut(s)	859, 1180, 1275
BseRI	GAGGAG	1 cut(s)	1301
BseXI	GCAGC	3 cut(s)	302, 305, 434
BsgI	GTGCAG	1 cut(s)	810
BshFI	GGCC	2 cut(s)	1170, 1393
BsiHKCI	CYCGRG	2 cut(s)	96, 926
BsiSI	CCGG	3 cut(s)	927, 1171, 1358
BslI	CCNNNNNNNGG	4 cut(s)	225, 572, 1114, 1255
BsmAI	GTCTC	1 cut(s)	1123
BsmI	GAATGC	2 cut(s)	1140, 1411
BsnI	GGCC	2 cut(s)	1170, 1393
Bso31I	GGTCTC	1 cut(s)	1123
BsoBI	CYCGRG	2 cut(s)	96, 926
Bsp119I	TTCGAA	3 cut(s)	113, 970, 1403
Bsp143I	GATC	5 cut(s)	37, 289, 588, 922, 1190
BspACI	CCGC	2 cut(s)	199, 516
BspANI	GGCC	2 cut(s)	1170, 1393
BspCNI	CTCAG	2 cut(s)	157, 901
BspHI	TCATGA	2 cut(s)	286, 891
BspLI	GGNNCC	1 cut(s)	217
BspPI	GGATC	2 cut(s)	596, 917
BspQI	GCTCTTC	1 cut(s)	378
BspT104I	TTCGAA	3 cut(s)	113, 970, 1403
BspTI	CTTAAG	1 cut(s)	395
BspTNI	GGTCTC	1 cut(s)	1123
BsrI	ACTGG	3 cut(s)	859, 1180, 1275
BssECI	CCNNGG	6 cut(s)	219, 324, 406, 926, 927, 1394
BssMI	GATC	5 cut(s)	37, 289, 588, 922, 1190
BssNAI	GTATAC	1 cut(s)	563
BssT1I	CCWWGG	4 cut(s)	219, 324, 406, 1394
Bst1107I	GTATAC	1 cut(s)	563
Bst4CI	ACNGT	3 cut(s)	624, 656, 1322
Bst6I	CTCTTC	1 cut(s)	378
BstAFI	CTTAAG	1 cut(s)	395
BstBAI	YACGTR	2 cut(s)	430, 862
BstBI	TTCGAA	3 cut(s)	113, 970, 1403
BstC8I	GCNNGC	4 cut(s)	11, 766, 1168, 1236
BstDEI	CTNAG	3 cut(s)	144, 509, 909
BstENI	CCTNNNNNAGG	2 cut(s)	223, 1253
BstF5I	GGATG	5 cut(s)	133, 251, 348, 768, 1102
BstH2I	RGCGCY	1 cut(s)	815
BstHHI	GCGC	2 cut(s)	814, 1158
BstKTI	GATC	5 cut(s)	40, 292, 591, 925, 1193
BstMAI	GTCTC	1 cut(s)	1123
BstMBI	GATC	5 cut(s)	37, 289, 588, 922, 1190
BstNSI	RCATGY	2 cut(s)	192, 768
BstSCI	CCNGG	2 cut(s)	925, 926
BstV1I	GCAGC	3 cut(s)	302, 305, 434
BstV2I	GAAGAC	3 cut(s)	93, 636, 765
BstX2I	RGATCY	2 cut(s)	588, 922
BstYI	RGATCY	2 cut(s)	588, 922
BstZ17I	GTATAC	1 cut(s)	563
BsuRI	GGCC	2 cut(s)	1170, 1393
BtrI	CACGTC	1 cut(s)	242
BtsCI	GGATG	5 cut(s)	133, 251, 348, 768, 1102
BtsIMutI	CAGTG	3 cut(s)	168, 661, 1282
Cac8I	GCNNGC	4 cut(s)	11, 766, 1168, 1236
CciI	TCATGA	2 cut(s)	286, 891
CfoI	GCGC	2 cut(s)	814, 1158
Cfr13I	GGNCC	2 cut(s)	328, 1002
Cfr9I	CCCGGG	1 cut(s)	926
CseI	GACGC	1 cut(s)	770
Csp6I	GTAC	1 cut(s)	1384
CviAII	CATG	7 cut(s)	189, 287, 484, 765, 892, 962, 1006
CviQI	GTAC	1 cut(s)	1384
DdeI	CTNAG	3 cut(s)	144, 509, 909
DpnI	GATC	5 cut(s)	39, 291, 590, 924, 1192
DpnII	GATC	5 cut(s)	37, 289, 588, 922, 1190
DraI	TTTAAA	1 cut(s)	1128
EaeI	YGGCCR	2 cut(s)	1168, 1391
Eam1104I	CTCTTC	1 cut(s)	378
EarI	CTCTTC	1 cut(s)	378
Eco130I	CCWWGG	4 cut(s)	219, 324, 406, 1394
Eco31I	GGTCTC	1 cut(s)	1123
Eco47I	GGWCC	2 cut(s)	328, 1002
Eco47III	AGCGCT	1 cut(s)	813
Eco72I	CACGTG	1 cut(s)	862
Eco88I	CYCGRG	2 cut(s)	96, 926
EcoNI	CCTNNNNNAGG	2 cut(s)	223, 1253
EcoO109I	RGGNCCY	1 cut(s)	328
EcoRI	GAATTC	2 cut(s)	334, 1074
EcoT14I	CCWWGG	4 cut(s)	219, 324, 406, 1394
EcoT22I	ATGCAT	2 cut(s)	611, 770
ErhI	CCWWGG	4 cut(s)	219, 324, 406, 1394
FaeI	CATG	7 cut(s)	192, 290, 487, 768, 895, 965, 1009
FalI	AAGNNNNNCTT	2 cut(s)	661, 693
FatI	CATG	7 cut(s)	188, 286, 483, 764, 891, 961, 1005
FbaI	TGATCA	1 cut(s)	289
FblI	GTMKAC	2 cut(s)	562, 1324
Fnu4HI	GCNGC	3 cut(s)	316, 319, 423
FokI	GGATG	5 cut(s)	120, 258, 355, 755, 1109
Fsp4HI	GCNGC	3 cut(s)	316, 319, 423
FspBI	CTAG	2 cut(s)	554, 920
FspI	TGCGCA	1 cut(s)	1157
GlaI	GCGC	2 cut(s)	813, 1157
GluI	GCNGC	3 cut(s)	316, 319, 423
HaeII	RGCGCY	1 cut(s)	815
HaeIII	GGCC	2 cut(s)	1170, 1393
HapII	CCGG	3 cut(s)	927, 1171, 1358
HgaI	GACGC	1 cut(s)	770
HhaI	GCGC	2 cut(s)	814, 1158
Hin1II	CATG	7 cut(s)	192, 290, 487, 768, 895, 965, 1009
Hin6I	GCGC	2 cut(s)	812, 1156
HinP1I	GCGC	2 cut(s)	812, 1156
HincII	GTYRAC	2 cut(s)	24, 549
HindII	GTYRAC	2 cut(s)	24, 549
HindIII	AAGCTT	2 cut(s)	1087, 1232
HinfI	GANTC	6 cut(s)	15, 20, 99, 164, 235, 1290
HpaII	CCGG	3 cut(s)	927, 1171, 1358
HphI	GGTGA	3 cut(s)	733, 943, 1270
Hpy166II	GTNNAC	6 cut(s)	24, 549, 563, 690, 1108, 1325
Hpy188I	TCNGA	2 cut(s)	648, 997
Hpy188III	TCNNGA	9 cut(s)	44, 56, 232, 287, 293, 533, 892, 986, 1378
Hpy8I	GTNNAC	6 cut(s)	24, 549, 563, 690, 1108, 1325
Hpy99I	CGWCG	1 cut(s)	243
HpyAV	CCTTC	2 cut(s)	82, 293
HpyCH4III	ACNGT	3 cut(s)	624, 656, 1322
HpyCH4IV	ACGT	3 cut(s)	241, 429, 861
HpyCH4V	TGCA	9 cut(s)	9, 176, 453, 603, 609, 768, 827, 1228, 1333
HpyF3I	CTNAG	3 cut(s)	144, 509, 909
HpySE526I	ACGT	3 cut(s)	241, 429, 861
Hsp92II	CATG	7 cut(s)	192, 290, 487, 768, 895, 965, 1009
HspAI	GCGC	2 cut(s)	812, 1156
Ksp22I	TGATCA	1 cut(s)	289
Kzo9I	GATC	5 cut(s)	37, 289, 588, 922, 1190
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	3 cut(s)	518, 809, 1360
Lsp1109I	GCAGC	3 cut(s)	302, 305, 434
LweI	GCATC	4 cut(s)	163, 475, 618, 777
MaeI	CTAG	2 cut(s)	554, 920
MaeII	ACGT	3 cut(s)	241, 429, 861
MaeIII	GTNAC	3 cut(s)	191, 739, 1258
MalI	GATC	5 cut(s)	39, 291, 590, 924, 1192
MboI	GATC	5 cut(s)	37, 289, 588, 922, 1190
MboII	GAAGA	5 cut(s)	32, 98, 395, 641, 770
MfeI	CAATTG	1 cut(s)	1328
MflI	RGATCY	2 cut(s)	588, 922
MlsI	TGGCCA	1 cut(s)	1393
MluCI	AATT	8 cut(s)	334, 434, 617, 715, 724, 841, 1074, 1328
MluNI	TGGCCA	1 cut(s)	1393
MlyI	GAGTC	2 cut(s)	29, 108
MmeI	TCCRAC	1 cut(s)	606
MnlI	CCTC	8 cut(s)	101, 219, 565, 1015, 1156, 1249, 1322, 1374
Mox20I	TGGCCA	1 cut(s)	1393
Mph1103I	ATGCAT	2 cut(s)	611, 770
MroXI	GAANNNNTTC	2 cut(s)	63, 387
MscI	TGGCCA	1 cut(s)	1393
Msp20I	TGGCCA	1 cut(s)	1393
MspA1I	CMGCKG	1 cut(s)	199
MspCI	CTTAAG	1 cut(s)	395
MspI	CCGG	3 cut(s)	927, 1171, 1358
MspR9I	CCNGG	2 cut(s)	927, 928
MunI	CAATTG	1 cut(s)	1328
Mva1269I	GAATGC	2 cut(s)	1140, 1411
NciI	CCSGG	2 cut(s)	927, 928
NdeII	GATC	5 cut(s)	37, 289, 588, 922, 1190
NlaIII	CATG	7 cut(s)	192, 290, 487, 768, 895, 965, 1009
NlaIV	GGNNCC	1 cut(s)	217
NmuCI	GTSAC	3 cut(s)	191, 739, 1258
NsbI	TGCGCA	1 cut(s)	1157
NsiI	ATGCAT	2 cut(s)	611, 770
NspI	RCATGY	2 cut(s)	192, 768
NspV	TTCGAA	3 cut(s)	113, 970, 1403
PaeI	GCATGC	1 cut(s)	768
PaeR7I	CTCGAG	1 cut(s)	96
PagI	TCATGA	2 cut(s)	286, 891
PciI	ACATGT	1 cut(s)	188
PciSI	GCTCTTC	1 cut(s)	378
PctI	GAATGC	2 cut(s)	1140, 1411
PdmI	GAANNNNTTC	2 cut(s)	63, 387
PfeI	GAWTC	4 cut(s)	15, 164, 235, 1290
PflFI	GACNNNGTC	1 cut(s)	1103
PflMI	CCANNNNNTGG	1 cut(s)	1114
PkrI	GCNGC	3 cut(s)	317, 320, 424
PleI	GAGTC	2 cut(s)	28, 107
PmaCI	CACGTG	1 cut(s)	862
PmlI	CACGTG	1 cut(s)	862
PpsI	GAGTC	2 cut(s)	28, 107
Ppu21I	YACGTR	2 cut(s)	430, 862
PpuMI	RGGWCCY	1 cut(s)	328
PscI	ACATGT	1 cut(s)	188
PsiI	TTATAA	1 cut(s)	714
Psp5II	RGGWCCY	1 cut(s)	328
PspCI	CACGTG	1 cut(s)	862
PspN4I	GGNNCC	1 cut(s)	217
PspPI	GGNCC	2 cut(s)	328, 1002
PspPPI	RGGWCCY	1 cut(s)	328
PspXI	VCTCGAGB	1 cut(s)	96
PsuI	RGATCY	2 cut(s)	588, 922
PsyI	GACNNNGTC	1 cut(s)	1103
RsaI	GTAC	1 cut(s)	1385
RsaNI	GTAC	1 cut(s)	1384
SapI	GCTCTTC	1 cut(s)	378
SatI	GCNGC	3 cut(s)	316, 319, 423
Sau3AI	GATC	5 cut(s)	37, 289, 588, 922, 1190
Sau96I	GGNCC	2 cut(s)	328, 1002
SchI	GAGTC	2 cut(s)	29, 108
ScrFI	CCNGG	2 cut(s)	927, 928
SfaNI	GCATC	4 cut(s)	163, 475, 618, 777
Sfr274I	CTCGAG	1 cut(s)	96
SfuI	TTCGAA	3 cut(s)	113, 970, 1403
SinI	GGWCC	2 cut(s)	328, 1002
SlaI	CTCGAG	1 cut(s)	96
SmaI	CCCGGG	1 cut(s)	928
SmlI	CTYRAG	3 cut(s)	96, 395, 880
SmoI	CTYRAG	3 cut(s)	96, 395, 880
SpeI	ACTAGT	1 cut(s)	553
SphI	GCATGC	1 cut(s)	768
Sse9I	AATT	8 cut(s)	334, 434, 617, 715, 724, 841, 1074, 1328
SsiI	CCGC	2 cut(s)	199, 516
SspI	AATATT	1 cut(s)	496
SspMI	CTAG	2 cut(s)	554, 920
StyD4I	CCNGG	2 cut(s)	925, 926
StyI	CCWWGG	4 cut(s)	219, 324, 406, 1394
TaaI	ACNGT	3 cut(s)	624, 656, 1322
TaiI	ACGT	3 cut(s)	244, 432, 864
TaqI	TCGA	8 cut(s)	18, 97, 113, 238, 357, 534, 970, 1403
TasI	AATT	8 cut(s)	334, 434, 617, 715, 724, 841, 1074, 1328
TfiI	GAWTC	4 cut(s)	15, 164, 235, 1290
TscAI	CASTG	3 cut(s)	175, 661, 1282
TseFI	GTSAC	3 cut(s)	191, 739, 1258
TseI	GCWGC	3 cut(s)	315, 318, 422
Tsp45I	GTSAC	3 cut(s)	191, 739, 1258
TspMI	CCCGGG	1 cut(s)	926
TspRI	CASTG	3 cut(s)	175, 661, 1282
Tth111I	GACNNNGTC	1 cut(s)	1103
Van91I	CCANNNNNTGG	1 cut(s)	1114
Vha464I	CTTAAG	1 cut(s)	395
VpaK11BI	GGWCC	2 cut(s)	328, 1002
XagI	CCTNNNNNAGG	2 cut(s)	223, 1253
XapI	RAATTY	4 cut(s)	334, 434, 841, 1074
XceI	RCATGY	2 cut(s)	192, 768
XhoI	CTCGAG	1 cut(s)	96
XmaI	CCCGGG	1 cut(s)	926
XmiI	GTMKAC	2 cut(s)	562, 1324
XmnI	GAANNNNTTC	2 cut(s)	63, 387
XspI	CTAG	2 cut(s)	554, 920
Zsp2I	ATGCAT	2 cut(s)	611, 770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.