AT5G65570

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0016599
Physical Location & Seq
Forward (+)
26203968 .. 26206667
2700 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G65570.1

Sequence Viewer

Length: 2217 bp
ATGGGCCGATATGAGCTACACTATGGAGGTGATCGGCGGAATAATGCGCCGGCAATGAGAAGAGATTATAACGGCGGATTGATCGCCTTTTCGAGATATTTCAGCTTCTTTTCTAGCAGAACATGTTCACCGGAATCATCTATCAATAACCAGTTTAGGCTTCTCTGCATCACTTGTGATACCCTGACAACGACGCACAATTTCTCTCAGCTTCTCAGACAATGCATCGACGAAAGATCGATATCAGGAATCAAGACTATCCAAGCCCATATGCTGAAATCTGGTTTTCCGGCCGAAATTTCCGGCAGCAAACTCGTCGACGCGAGTTTAAAGTGTGGCGATATCGATTACGCACGACAGGTGTTCGATGGAATGTCTGAGAGACATATTGTAACATGGAACTCTTTAATTGCTTATTTAATTAAGCACAGAAGAAGCAAGGAAGCTGTTGAGATGTATAGATTGATGATTACGAATAATGTTTTGCCAGATGAGTACACGTTGTCTAGTGTTTTCAAGGCGTTTTCAGATTTGAGTCTTGAGAAGGAAGCACAGAGAAGCCACGGACTTGCTGTGATTTTGGGTTTGGAAGTCTCAAACGTGTTCGTTGGAAGTGCTCTTGTGGATATGTATGTAAAGTTTGGTAAAACGAGGGAGGCGAAGTTAGTATTGGACCGCGTGGAGGAGAAAGATGTAGTTTTGATCACAGCTTTGATCGTTGGTTACTCGCAGAAGGGTGAAGATACTGAAGCTGTGAAGGCATTTCAAAGTATGTTGGTGGAGAAAGTTCAGCCTAATGAGTATACTTACGCTAGTGTATTGATTTCTTGTGGAAACTTAAAGGATATAGGTAATGGCAAGTTGATTCATGGACTTATGGTCAAGTCCGGTTTTGAGTCTGCGCTTGCTTCACAAACTTCTCTTCTTACCATGTATTTGAGGTGCAGTTTGGTCGATGATTCCTTGCGGGTTTTCAAGTGTATTGAGTACCCAAATCAGGTGAGTTGGACGTCTCTTATATCAGGGCTTGTCCAAAATGGTAGAGAAGAGATGGCTCTAATCGAATTTAGAAAAATGATGCGTGATTCAATCAAGCCTAACTCTTTTACATTGTCAAGTGCTCTCAGGGGGTGCTCGAATCTCGCAATGTTTGAAGAAGGTAGACAGATTCATGGTATAGTGACTAAATATGGTTTTGATAGAGATAAGTATGCCGGATCAGGGCTCATTGATTTATATGGGAAATGTGGATGCTCAGACATGGCAAGATTGGTTTTTGATACCTTGAGTGAAGTTGATGTTATATCTTTGAACACAATGATATACAGTTATGCACAGAACGGTTTTGGACGCGAAGCACTTGACTTGTTTGAGAGAATGATAAATCTTGGACTGCAGCCGAACGATGTAACAGTCTTGAGCGTACTCTTGGCTTGTAATAACTCTAGATTAGTTGAGGAAGGTTGCGAACTCTTTGACTCCTTTAGAAAGGATAAGATCATGTTAACAAATGATCATTACGCGTGTATGGTAGATTTGCTTGGACGGGCAGGGAGATTAGAGGAAGCGGAAATGCTTACAACCGAGGTAATAAACCCGGATTTGGTTCTGTGGAGGACGCTGCTTAGTGCTTGTAAGGTTCATAGAAAGGTAGAAATGGCAGAGCGGATAACGAGAAAAATCCTAGAGATAGAACCTGGGGATGAAGGAACTCTCATTCTAATGTCAAATCTCTACGCATCCACTGGGAAATGGAACAGGGTGATTGAGATGAAGAGCAAAATGAAGGATATGAAACTAAAGAAGAATCCAGCAATGAGTTGGGTTGAAATCAATAAAGAGACGCATACATTCATGGCTGGAGATTTGTTTTCGCATCCCAACTCTGAGCAGATTCTTGAAAATCTCGAAGAGCTGATTAAGAAGTCTAAAGATTTGGGATATGTAGAAGACAAAAGCTGTGTGTTTCAAGACATGGAGGAGACTGCAAAAGAGAGATCTCTGCATCAACATAGCGAAAAACTCGCCATAGCTTTCGCAGTGTGGAGAAATGTTGGTGGAAGTATAAGGATTCTAAAGAACCTTAGAGTTTGTGTTGATTGTCACAGTTGGATCAAGATCGTGTCAAGAGTTATGAAGAGAGAAATTATATGTAGAGATTCAAAAAGGTTTCATCATTTCAGAGATGGGTCTTGTTCGTGTGGGGATTATTGGTAA

Protein Analysis

738

Amino Acids

83.68

Weight (kDa)

7.21

Isoelectric Point (pI)

39.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 130 - 176 2.2e-11 PPR repeat family
PPR_2 PF13041 230 - 277 1.2e-07 PPR repeat family
PPR_2 PF13041 331 - 380 1.1e-09 PPR repeat family
PPR_2 PF13041 433 - 478 1.1e-07 PPR repeat family
PPR PF01535 436 - 465 6.2e-07 PPR repeat
E_motif PF20431 548 - 610 1.6e-16 E motif
Eplus_motif PF20430 615 - 642 5.2e-06 E+ motif
DYW_deaminase PF14432 647 - 738 3.1e-34 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0016599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G65570
malus_domestica MD15G1309800.v1.1
prunus_persica Prupe.6G204100_v2.0.a1 Prupe.6G204100_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0110721
rosa_laevigata RLG00000017836
rosa_multiflora Rmu_sc0000389.1_g000048
rosa_rugosa Rorug02G0168100 Rorug02G0169300
rosa_samantha Rh2AG221300 Rh2BG231500 Rh2CG223800 Rh2DG227500
rosa_wichuraiana Rw2G017090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 69
AatII GACGTC 1 cut(s) 1013
AccBSI CCGCTC 1 cut(s) 1666
AccI GTMKAC 3 cut(s) 318, 803, 1162
AccII CGCG 4 cut(s) 323, 678, 1353, 1523
AciI CCGC 6 cut(s) 37, 75, 676, 967, 1568, 1666
AclWI GGATC 2 cut(s) 1225, 2120
AcoI YGGCCR 1 cut(s) 291
AcsI RAATTY 2 cut(s) 297, 1064
AcuI CTGAAG 1 cut(s) 768
AcyI GRCGYC 1 cut(s) 1010
AfaI GTAC 3 cut(s) 497, 989, 1425
AfiI CCNNNNNNNGG 4 cut(s) 682, 997, 1221, 1603
AflIII ACRYGT 4 cut(s) 122, 498, 600, 1521
AhdI GACNNNNNGTC 1 cut(s) 878
AjnI CCWGG 1 cut(s) 1696
AjuI GAANNNNNNNTTGG 2 cut(s) 653, 685
AluBI AGCT 9 cut(s) 16, 105, 211, 446, 710, 752, 1915, 1959, 2033
AluI AGCT 9 cut(s) 16, 105, 211, 446, 710, 752, 1915, 1959, 2033
Alw21I GWGCWC 3 cut(s) 619, 1123, 1136
Alw26I GTCTC 5 cut(s) 376, 598, 1017, 1835, 1976
AlwI GGATC 2 cut(s) 1225, 2120
AoxI GGCC 2 cut(s) 4, 291
ApeKI GCWGC 3 cut(s) 306, 1396, 1621
ApoI RAATTY 2 cut(s) 297, 1064
Asp700I GAANNNNTTC 1 cut(s) 124
AspLEI GCGC 2 cut(s) 49, 904
AspS9I GGNCC 2 cut(s) 4, 673
AsuC2I CCSGG 1 cut(s) 1598
AsuHPI GGTGA 5 cut(s) 41, 120, 749, 1012, 1774
AvaII GGWCC 1 cut(s) 673
BanII GRGCYC 1 cut(s) 1227
BbsI GAAGAC 1 cut(s) 1956
Bbv12I GWGCWC 3 cut(s) 619, 1123, 1136
BbvI GCAGC 3 cut(s) 318, 1408, 1608
BccI CCATC 3 cut(s) 362, 1045, 2180
BceAI ACGGC 1 cut(s) 88
BcgI CGANNNNNNTGC 6 cut(s) 295, 298, 329, 332, 934, 968
BciT130I CCWGG 1 cut(s) 1698
BclI TGATCA 2 cut(s) 702, 1513
BcnI CCSGG 1 cut(s) 1598
BcoDI GTCTC 5 cut(s) 376, 598, 1017, 1835, 1976
BfaI CTAG 5 cut(s) 114, 507, 813, 1446, 1685
BfmI CTRYAG 1 cut(s) 1394
BglII AGATCT 1 cut(s) 1997
BisI GCNGC 3 cut(s) 307, 1397, 1622
BlsI GCNGC 3 cut(s) 308, 1398, 1623
Bme1390I CCNGG 2 cut(s) 1598, 1698
Bme18I GGWCC 1 cut(s) 673
BmeRI GACNNNNNGTC 1 cut(s) 878
BmgT120I GGNCC 2 cut(s) 4, 673
BmrFI CCNGG 2 cut(s) 1598, 1698
BmrI ACTGGG 1 cut(s) 1755
BmsI GCATC 7 cut(s) 177, 234, 1068, 1241, 1748, 1885, 2014
BmuI ACTGGG 1 cut(s) 1755
BpiI GAAGAC 1 cut(s) 1956
BpmI CTGGAG 1 cut(s) 1881
BpuEI CTTGAG 3 cut(s) 560, 1306, 1438
BpuMI CCSGG 1 cut(s) 1598
Bsa29I ATCGAT 2 cut(s) 239, 345
BsaBI GATNNNNATC 2 cut(s) 241, 2117
BsaHI GRCGYC 1 cut(s) 1010
BsaJI CCNNGG 3 cut(s) 562, 1584, 1697
BsaWI WCCGGW 2 cut(s) 130, 887
BsaXI ACNNNNNCTCC 2 cut(s) 647, 677
Bsc4I CCNNNNNNNGG 4 cut(s) 682, 997, 1221, 1603
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 2 cut(s) 151, 1750
Bse3DI GCAATG 3 cut(s) 60, 1152, 1821
Bse8I GATNNNNATC 2 cut(s) 241, 2117
BseBI CCWGG 1 cut(s) 1698
BseCI ATCGAT 2 cut(s) 239, 345
BseDI CCNNGG 3 cut(s) 562, 1584, 1697
BseGI GGATG 4 cut(s) 1256, 1708, 1739, 1876
BseJI GATNNNNATC 2 cut(s) 241, 2117
BseLI CCNNNNNNNGG 4 cut(s) 682, 997, 1221, 1603
BseMI GCAATG 3 cut(s) 60, 1152, 1821
BseMII CTCAG 6 cut(s) 221, 229, 369, 1138, 1269, 1878
BseNI ACTGG 2 cut(s) 151, 1750
BseRI GAGGAG 2 cut(s) 698, 1994
BseX3I CGGCCG 1 cut(s) 291
BseXI GCAGC 3 cut(s) 318, 1408, 1608
BsgI GTGCAG 1 cut(s) 964
Bsh1236I CGCG 4 cut(s) 323, 678, 1353, 1523
Bsh1285I CGRYCG 1 cut(s) 294
BshFI GGCC 2 cut(s) 6, 293
BshVI ATCGAT 2 cut(s) 239, 345
BsiEI CGRYCG 1 cut(s) 294
BsiHKAI GWGCWC 3 cut(s) 619, 1123, 1136
BsiSI CCGG 7 cut(s) 50, 131, 290, 303, 888, 1215, 1598
BslI CCNNNNNNNGG 4 cut(s) 682, 997, 1221, 1603
BsmAI GTCTC 5 cut(s) 376, 598, 1017, 1835, 1976
BsmBI CGTCTC 2 cut(s) 1017, 1835
BsnI GGCC 2 cut(s) 6, 293
Bsp1286I GDGCHC 4 cut(s) 619, 1123, 1136, 1227
BspACI CCGC 6 cut(s) 37, 75, 676, 967, 1568, 1666
BspANI GGCC 2 cut(s) 6, 293
BspCNI CTCAG 6 cut(s) 220, 228, 370, 1137, 1268, 1879
BspDI ATCGAT 2 cut(s) 239, 345
BspFNI CGCG 4 cut(s) 323, 678, 1353, 1523
BspMAI CTGCAG 1 cut(s) 1398
BspPI GGATC 2 cut(s) 1225, 2120
BspQI GCTCTTC 2 cut(s) 1769, 1905
BsrBI CCGCTC 1 cut(s) 1666
BsrDI GCAATG 3 cut(s) 60, 1152, 1821
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 2 cut(s) 151, 1750
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 3 cut(s) 562, 1584, 1697
BssNAI GTATAC 1 cut(s) 804
BssNI GRCGYC 1 cut(s) 1010
Bst1107I GTATAC 1 cut(s) 804
Bst2UI CCWGG 1 cut(s) 1698
Bst4CI ACNGT 4 cut(s) 1328, 1343, 1414, 2108
Bst6I CTCTTC 6 cut(s) 55, 927, 1041, 1769, 1905, 2132
BstACI GRCGYC 1 cut(s) 1010
BstC8I GCNNGC 2 cut(s) 51, 906
BstDEI CTNAG 8 cut(s) 207, 215, 378, 1124, 1255, 1625, 1887, 2084
BstDSI CCRYGG 1 cut(s) 562
BstF5I GGATG 4 cut(s) 1256, 1708, 1739, 1876
BstFNI CGCG 4 cut(s) 323, 678, 1353, 1523
BstHHI GCGC 2 cut(s) 49, 904
BstMAI GTCTC 5 cut(s) 376, 598, 1017, 1835, 1976
BstMCI CGRYCG 1 cut(s) 294
BstMWI GCNNNNNNNGC 1 cut(s) 758
BstNI CCWGG 1 cut(s) 1698
BstNSI RCATGY 1 cut(s) 126
BstSCI CCNGG 2 cut(s) 1596, 1696
BstSFI CTRYAG 1 cut(s) 1394
BstUI CGCG 4 cut(s) 323, 678, 1353, 1523
BstV1I GCAGC 3 cut(s) 318, 1408, 1608
BstV2I GAAGAC 1 cut(s) 1956
BstX2I RGATCY 1 cut(s) 1997
BstYI RGATCY 1 cut(s) 1997
BstZ17I GTATAC 1 cut(s) 804
BstZI CGGCCG 1 cut(s) 291
Bsu15I ATCGAT 2 cut(s) 239, 345
BsuRI GGCC 2 cut(s) 6, 293
BsuTUI ATCGAT 2 cut(s) 239, 345
BtgI CCRYGG 1 cut(s) 562
BtsCI GGATG 4 cut(s) 1256, 1708, 1739, 1876
BtsI GCAGTG 1 cut(s) 2046
BtsIMutI CAGTG 2 cut(s) 1743, 2046
Cac8I GCNNGC 2 cut(s) 51, 906
CfoI GCGC 2 cut(s) 49, 904
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 2 cut(s) 4, 673
ClaI ATCGAT 2 cut(s) 239, 345
CseI GACGC 5 cut(s) 202, 329, 1359, 1627, 1852
Csp6I GTAC 3 cut(s) 496, 988, 1424
CviAII CATG 9 cut(s) 123, 396, 869, 931, 1172, 1261, 1501, 1855, 1975
CviQI GTAC 3 cut(s) 496, 988, 1424
DdeI CTNAG 8 cut(s) 207, 215, 378, 1124, 1255, 1625, 1887, 2084
DraI TTTAAA 1 cut(s) 330
DriI GACNNNNNGTC 1 cut(s) 878
EaeI YGGCCR 1 cut(s) 291
EagI CGGCCG 1 cut(s) 291
Eam1104I CTCTTC 6 cut(s) 55, 927, 1041, 1769, 1905, 2132
Eam1105I GACNNNNNGTC 1 cut(s) 878
EarI CTCTTC 6 cut(s) 55, 927, 1041, 1769, 1905, 2132
EciI GGCGGA 2 cut(s) 52, 90
EclXI CGGCCG 1 cut(s) 291
Eco24I GRGCYC 1 cut(s) 1227
Eco32I GATATC 2 cut(s) 243, 343
Eco47I GGWCC 1 cut(s) 673
Eco52I CGGCCG 1 cut(s) 291
Eco57I CTGAAG 1 cut(s) 768
EcoRII CCWGG 1 cut(s) 1696
EcoRV GATATC 2 cut(s) 243, 343
EcoT22I ATGCAT 1 cut(s) 227
EcoT38I GRGCYC 1 cut(s) 1227
Esp3I CGTCTC 2 cut(s) 1017, 1835
FaeI CATG 9 cut(s) 126, 399, 872, 934, 1175, 1264, 1504, 1858, 1978
FatI CATG 9 cut(s) 122, 395, 868, 930, 1171, 1260, 1500, 1854, 1974
FauI CCCGC 1 cut(s) 960
FauNDI CATATG 1 cut(s) 270
FbaI TGATCA 2 cut(s) 702, 1513
FblI GTMKAC 3 cut(s) 318, 803, 1162
Fnu4HI GCNGC 3 cut(s) 307, 1397, 1622
FokI GGATG 4 cut(s) 1263, 1715, 1726, 1863
FriOI GRGCYC 1 cut(s) 1227
Fsp4HI GCNGC 3 cut(s) 307, 1397, 1622
FspBI CTAG 5 cut(s) 114, 507, 813, 1446, 1685
GlaI GCGC 2 cut(s) 48, 903
GluI GCNGC 3 cut(s) 307, 1397, 1622
GsuI CTGGAG 1 cut(s) 1881
HaeIII GGCC 2 cut(s) 6, 293
HapII CCGG 7 cut(s) 50, 131, 290, 303, 888, 1215, 1598
HgaI GACGC 5 cut(s) 202, 329, 1359, 1627, 1852
HhaI GCGC 2 cut(s) 49, 904
Hin1I GRCGYC 1 cut(s) 1010
Hin1II CATG 9 cut(s) 126, 399, 872, 934, 1175, 1264, 1504, 1858, 1978
Hin6I GCGC 2 cut(s) 47, 902
HinP1I GCGC 2 cut(s) 47, 902
HincII GTYRAC 2 cut(s) 319, 1506
HindII GTYRAC 2 cut(s) 319, 1506
HpaI GTTAAC 1 cut(s) 1506
HpaII CCGG 7 cut(s) 50, 131, 290, 303, 888, 1215, 1598
HphI GGTGA 5 cut(s) 41, 120, 749, 1012, 1774
Hpy166II GTNNAC 6 cut(s) 128, 319, 498, 804, 1163, 1506
Hpy188I TCNGA 6 cut(s) 218, 379, 529, 1258, 1888, 2183
Hpy8I GTNNAC 6 cut(s) 128, 319, 498, 804, 1163, 1506
Hpy99I CGWCG 4 cut(s) 196, 233, 320, 323
HpyAV CCTTC 7 cut(s) 538, 727, 751, 1151, 1454, 1700, 1780
HpyCH4III ACNGT 4 cut(s) 1328, 1343, 1414, 2108
HpyCH4IV ACGT 3 cut(s) 500, 600, 1010
HpyCH4V TGCA 7 cut(s) 168, 225, 945, 1334, 1396, 1988, 2005
HpyF10VI GCNNNNNNNGC 1 cut(s) 758
HpyF3I CTNAG 8 cut(s) 207, 215, 378, 1124, 1255, 1625, 1887, 2084
HpySE526I ACGT 3 cut(s) 500, 600, 1010
Hsp92I GRCGYC 1 cut(s) 1010
Hsp92II CATG 9 cut(s) 126, 399, 872, 934, 1175, 1264, 1504, 1858, 1978
HspAI GCGC 2 cut(s) 47, 902
KroI GCCGGC 1 cut(s) 49
KroNI GCCGGC 1 cut(s) 51
Ksp22I TGATCA 2 cut(s) 702, 1513
KspAI GTTAAC 1 cut(s) 1506
LguI GCTCTTC 2 cut(s) 1769, 1905
Lsp1109I GCAGC 3 cut(s) 318, 1408, 1608
LweI GCATC 7 cut(s) 177, 234, 1068, 1241, 1748, 1885, 2014
MaeI CTAG 5 cut(s) 114, 507, 813, 1446, 1685
MaeII ACGT 3 cut(s) 500, 600, 1010
MaeIII GTNAC 5 cut(s) 391, 722, 1180, 1408, 2102
MbiI CCGCTC 1 cut(s) 1666
MflI RGATCY 1 cut(s) 1997
MhlI GDGCHC 4 cut(s) 619, 1123, 1136, 1227
MluCI AATT 6 cut(s) 199, 297, 408, 420, 1064, 2145
MluI ACGCGT 1 cut(s) 1521
MlyI GAGTC 3 cut(s) 544, 905, 1472
MmeI TCCRAC 3 cut(s) 589, 986, 2090
Mph1103I ATGCAT 1 cut(s) 227
MroNI GCCGGC 1 cut(s) 49
MroXI GAANNNNTTC 1 cut(s) 124
MseI TTAA 7 cut(s) 329, 407, 419, 423, 839, 1505, 1920
MslI CAYNNNNRTG 1 cut(s) 1721
MspI CCGG 7 cut(s) 50, 131, 290, 303, 888, 1215, 1598
MspR9I CCNGG 2 cut(s) 1598, 1698
MvaI CCWGG 1 cut(s) 1698
MvnI CGCG 4 cut(s) 323, 678, 1353, 1523
MwoI GCNNNNNNNGC 1 cut(s) 758
NaeI GCCGGC 1 cut(s) 51
NciI CCSGG 1 cut(s) 1598
NdeI CATATG 1 cut(s) 270
NgoMIV GCCGGC 1 cut(s) 49
NlaIII CATG 9 cut(s) 126, 399, 872, 934, 1175, 1264, 1504, 1858, 1978
NmuCI GTSAC 2 cut(s) 1180, 2102
NsiI ATGCAT 1 cut(s) 227
NspI RCATGY 1 cut(s) 126
PacI TTAATTAA 1 cut(s) 423
PciI ACATGT 1 cut(s) 122
PciSI GCTCTTC 2 cut(s) 1769, 1905
PcsI WCGNNNNNNNCGW 1 cut(s) 656
PdiI GCCGGC 1 cut(s) 51
PdmI GAANNNNTTC 1 cut(s) 124
PkrI GCNGC 3 cut(s) 308, 1398, 1623
PleI GAGTC 3 cut(s) 543, 904, 1472
PpsI GAGTC 3 cut(s) 543, 904, 1472
PscI ACATGT 1 cut(s) 122
PsiI TTATAA 1 cut(s) 69
Psp6I CCWGG 1 cut(s) 1696
PspGI CCWGG 1 cut(s) 1696
PspPI GGNCC 2 cut(s) 4, 673
PstI CTGCAG 1 cut(s) 1398
PsuI RGATCY 1 cut(s) 1997
RsaI GTAC 3 cut(s) 497, 989, 1425
RsaNI GTAC 3 cut(s) 496, 988, 1424
RseI CAYNNNNRTG 1 cut(s) 1721
SalI GTCGAC 1 cut(s) 317
SapI GCTCTTC 2 cut(s) 1769, 1905
SaqAI TTAA 7 cut(s) 329, 407, 419, 423, 839, 1505, 1920
SatI GCNGC 3 cut(s) 307, 1397, 1622
Sau96I GGNCC 2 cut(s) 4, 673
SchI GAGTC 3 cut(s) 544, 905, 1472
ScrFI CCNGG 2 cut(s) 1598, 1698
SduI GDGCHC 4 cut(s) 619, 1123, 1136, 1227
SfaNI GCATC 7 cut(s) 177, 234, 1068, 1241, 1748, 1885, 2014
SfcI CTRYAG 1 cut(s) 1394
SgrDI CGTCGACG 1 cut(s) 317
SinI GGWCC 1 cut(s) 673
SmiMI CAYNNNNRTG 1 cut(s) 1721
SmlI CTYRAG 3 cut(s) 539, 1285, 1417
SmoI CTYRAG 3 cut(s) 539, 1285, 1417
Sse9I AATT 6 cut(s) 199, 297, 408, 420, 1064, 2145
SsiI CCGC 6 cut(s) 37, 75, 676, 967, 1568, 1666
SspMI CTAG 5 cut(s) 114, 507, 813, 1446, 1685
StyD4I CCNGG 2 cut(s) 1596, 1696
TaaI ACNGT 4 cut(s) 1328, 1343, 1414, 2108
TaiI ACGT 3 cut(s) 503, 603, 1013
TasI AATT 6 cut(s) 199, 297, 408, 420, 1064, 2145
TatI WGTACW 1 cut(s) 495
Tru1I TTAA 7 cut(s) 329, 407, 419, 423, 839, 1505, 1920
Tru9I TTAA 7 cut(s) 329, 407, 419, 423, 839, 1505, 1920
TscAI CASTG 2 cut(s) 1750, 2046
TseFI GTSAC 2 cut(s) 1180, 2102
TseI GCWGC 3 cut(s) 306, 1396, 1621
Tsp45I GTSAC 2 cut(s) 1180, 2102
TspGWI ACGGA 1 cut(s) 579
TspRI CASTG 2 cut(s) 1750, 2046
VpaK11BI GGWCC 1 cut(s) 673
XapI RAATTY 2 cut(s) 297, 1064
XbaI TCTAGA 1 cut(s) 1445
XceI RCATGY 1 cut(s) 126
XcmI CCANNNNNNNNNTGG 1 cut(s) 1818
XmiI GTMKAC 3 cut(s) 318, 803, 1162
XmnI GAANNNNTTC 1 cut(s) 124
XspI CTAG 5 cut(s) 114, 507, 813, 1446, 1685
ZraI GACGTC 1 cut(s) 1011
Zsp2I ATGCAT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.