Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000389.1

Orthogroup ID

OG0016599

Physical Location & Seq

Genomic Coordinates Reverse (-)

242684 .. 244843

Gene Structure 2160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000389.1_g000048.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

atggcctttggtttccccaggcagttcaatttgtttgcaaccttggaaattgtaacaccgactctaaaccaactctcccacgtcaagtccttgacgtctcttgcccatgacacaagccacacagaggcctcaaacttttactcttctctgattcaacaatgcacacagacagagtccctaagaggcttgggaatagttcaaacccatatgatcaaatccgggtacatgcaactcagtatagccaataggctcgttgatgggtgtttgaaatgtggtagcttaagtaatgcacgtaaggtgttcgacgaattgcctgagagacatgtagtcatctggaatgcgatgatttcttcatacattggccacaagaagagtaaggaggctattgggttgtatgggaagatggtctttgatggagtttttccggatgagtacacgttttcgagtgttttcaaggctttttcgggtctgggacttgtatatgaagcgcggagggctcatgggttgtcagtggttttgggtctggaggtggcaaatgtgtttgttggtagtgctcttgttgatatgtatgcaaagtttggtagaatgggggatgcaaggttggtgtcgaatcgtgttggggagaaagatgttgttttgtttacggcgctgattgttggttactctcagcatggtgatgatggtgaagctcttgaggtttttggggacatgatcaaccaaggagtcaaggctaatgagtatacttttgctagcatcttgatcacttgtgggaacttggaggatttaactcatggtaagttggtccatggtcttgttgtcaaatctggttgtgaagctgctgtggcgtcacagacttcacttctaacaatgtatgctaggtgtggattgattgatgattctctgaggatttttaaaaggtttcagcatccaaacctggtaacttggacgtctcttatcgtggctcttgttcgaaatggtagagaagagttggctttgacaaagtttagaaagatgattcgtgattcagtagttccgaattcttttactttatctagtgttcttcaggcatgctcaagccttgctatgattgatgaaggacagcaaattcatgccacggtcacaaaatttggattggatagacacatatatgctggtgctgctctcattaacttgtatgggaaatgcggaaatacagagatggcaaggtcagtttttgatgccttgattgaaattgatttggtctccatgaattccatgatatatagctatgcgcagaatggatttggacatgaagcacttcagctttttgattggatgaaagacttgagacttgaaccaaacgatgttacaattttgagtgttctcttggcatgcaataattcaggattggtgcaacaaggctgccaaattttttctaccattaggagtaatcacaatattgagttgacaagggatcactatgcttgtatggttgatttgctggggcgtgctggaagacttgaagatgccgaaatgttgataaaagaagtcaaaaatccagatttagtattatggagggcactgctaagtgcatgtaaacttcatggacaggttgagatggcagaaagagctctaaagaaggtgcttgaacttgctccaggagacggaggatctcatgtcctgttgacaaatctttatgcttcaactggtaattggagtcaagttattgatatgaaaagtacaatgagggagatgaaattccagaagaacccggcaatgagttgggttgatgtggacagggaggttcacactttcatggctggagatttgtcccatccaagatctagagagataaatgaaaccttagagaaattgtttgaggaggtgcaaatattgggttatgttcctgatacaagatttgtgttacaggatttggatgaggagaagaagaagaggtcattgtactatcacagcgaaaagctagccattgcctttgctctattaatgagtagtaaaaagaatagcatcatcaggatattcaagaaccttaaagtttgtggggactgtcattcctggataaaatttgtcaccagagttattgggagagaaataattgctcgggacgccaaaagatttcatcattttaaggatgggtgttgttcctgtggagactattggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

719

Amino Acids

80.34

Weight (kDa)

7.09

Isoelectric Point (pI)

34.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65570
malus_domestica	MD15G1309800.v1.1
prunus_persica	Prupe.6G204100_v2.0.a1 Prupe.6G204100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110721
rosa_laevigata	RLG00000017836
rosa_multiflora	Rmu_sc0000389.1_g000048
rosa_rugosa	Rorug02G0168100 Rorug02G0169300
rosa_samantha	Rh2AG221300 Rh2BG231500 Rh2CG223800 Rh2DG227500
rosa_wichuraiana	Rw2G017090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	98, 950
Acc16I	TGCGCA	1 cut(s)	1272
AccI	GTMKAC	1 cut(s)	740
AccII	CGCG	1 cut(s)	490
AccIII	TCCGGA	1 cut(s)	424
AciI	CCGC	2 cut(s)	490, 1185
AclWI	GGATC	2 cut(s)	1461, 1657
AcoI	YGGCCR	1 cut(s)	361
AcsI	RAATTY	7 cut(s)	1036, 1104, 1124, 1249, 1407, 1736, 2060
AcuI	CTGAAG	2 cut(s)	1046, 1283
AcyI	GRCGYC	4 cut(s)	95, 845, 947, 2103
AfaI	GTAC	4 cut(s)	224, 434, 1720, 1943
AfiI	CCNNNNNNNGG	2 cut(s)	124, 1643
AflII	CTTAAG	1 cut(s)	280
AflIII	ACRYGT	2 cut(s)	322, 435
AhdI	GACNNNNNGTC	1 cut(s)	326
AjiI	CACGTC	1 cut(s)	82
AjnI	CCWGG	4 cut(s)	17, 933, 1636, 2051
AluBI	AGCT	7 cut(s)	279, 689, 836, 1266, 1303, 1610, 1960
AluI	AGCT	7 cut(s)	279, 689, 836, 1266, 1303, 1610, 1960
Alw21I	GWGCWC	2 cut(s)	556, 1612
Alw26I	GTCTC	7 cut(s)	102, 313, 954, 1246, 1321, 1635, 2142
AlwI	GGATC	2 cut(s)	1461, 1657
Ama87I	CYCGRG	1 cut(s)	2097
Aor13HI	TCCGGA	1 cut(s)	424
AoxI	GGCC	3 cut(s)	3, 126, 361
ApeKI	GCWGC	3 cut(s)	836, 1157, 1401
ApoI	RAATTY	7 cut(s)	1036, 1104, 1124, 1249, 1407, 1736, 2060
AseI	ATTAAT	1 cut(s)	1982
Asp700I	GAANNNNTTC	1 cut(s)	1296
AspLEI	GCGC	3 cut(s)	490, 649, 1273
AspS9I	GGNCC	1 cut(s)	802
AsuC2I	CCSGG	2 cut(s)	220, 1751
AsuHPI	GGTGA	3 cut(s)	686, 695, 2059
AsuII	TTCGAA	1 cut(s)	970
AsuNHI	GCTAGC	2 cut(s)	749, 1960
AvaI	CYCGRG	1 cut(s)	2097
AvaII	GGWCC	1 cut(s)	802
BaeGI	GKGCMC	1 cut(s)	1561
BalI	TGGCCA	1 cut(s)	363
BanII	GRGCYC	2 cut(s)	499, 1612
BbsI	GAAGAC	1 cut(s)	1501
Bbv12I	GWGCWC	2 cut(s)	556, 1612
BbvI	GCAGC	3 cut(s)	823, 1144, 1388
BccI	CCATC	8 cut(s)	251, 397, 407, 674, 1192, 1591, 1821, 2123
BceAI	ACGGC	1 cut(s)	660
BciT130I	CCWGG	4 cut(s)	19, 935, 1638, 2053
BclI	TGATCA	3 cut(s)	210, 711, 759
BcnI	CCSGG	2 cut(s)	220, 1751
BcoDI	GTCTC	7 cut(s)	102, 313, 954, 1246, 1321, 1635, 2142
BfaI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
BfoI	RGCGCY	1 cut(s)	650
BfrI	CTTAAG	1 cut(s)	280
BglII	AGATCT	1 cut(s)	1820
BisI	GCNGC	3 cut(s)	837, 1158, 1402
BlsI	GCNGC	3 cut(s)	838, 1159, 1403
Bme1390I	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
Bme18I	GGWCC	1 cut(s)	802
BmeRI	GACNNNNNGTC	1 cut(s)	326
BmeT110I	CYCGRG	1 cut(s)	2097
BmgBI	CACGTC	1 cut(s)	82
BmgT120I	GGNCC	1 cut(s)	802
BmrFI	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
BmsI	GCATC	6 cut(s)	583, 762, 934, 1207, 1495, 2013
BmtI	GCTAGC	2 cut(s)	753, 1964
BpiI	GAAGAC	1 cut(s)	1501
BpmI	CTGGAG	3 cut(s)	545, 1620, 1821
Bpu14I	TTCGAA	1 cut(s)	970
BpuEI	CTTGAG	3 cut(s)	713, 1057, 1345
BpuMI	CCSGG	2 cut(s)	220, 1751
BsaAI	YACGTR	1 cut(s)	293
BsaHI	GRCGYC	4 cut(s)	95, 845, 947, 2103
BsaI	GGTCTC	1 cut(s)	1246
BsaJI	CCNNGG	5 cut(s)	17, 42, 718, 805, 1113
BsaWI	WCCGGW	1 cut(s)	424
BsaXI	ACNNNNNCTCC	2 cut(s)	59, 89
Bsc4I	CCNNNNNNNGG	2 cut(s)	124, 1643
Bse1I	ACTGG	1 cut(s)	1690
Bse3DI	GCAATG	2 cut(s)	1761, 1965
BseAI	TCCGGA	1 cut(s)	424
BseBI	CCWGG	4 cut(s)	19, 935, 1638, 2053
BseDI	CCNNGG	5 cut(s)	17, 42, 718, 805, 1113
BseGI	GGATG	7 cut(s)	433, 598, 925, 1320, 1813, 1921, 2134
BseLI	CCNNNNNNNGG	2 cut(s)	124, 1643
BseMI	GCAATG	2 cut(s)	1761, 1965
BseMII	CTCAG	4 cut(s)	247, 306, 680, 893
BseNI	ACTGG	1 cut(s)	1690
BseRI	GAGGAG	2 cut(s)	1874, 1934
BseSI	GKGCMC	1 cut(s)	1561
BseXI	GCAGC	3 cut(s)	823, 1144, 1388
BseYI	CCCAGC	1 cut(s)	1480
Bsh1236I	CGCG	1 cut(s)	490
BshFI	GGCC	3 cut(s)	5, 128, 363
BsiHKAI	GWGCWC	2 cut(s)	556, 1612
BsiHKCI	CYCGRG	1 cut(s)	2097
BsiSI	CCGG	3 cut(s)	219, 425, 1751
BslFI	GGGAC	6 cut(s)	160, 486, 719, 1795, 2054, 2114
BslI	CCNNNNNNNGG	2 cut(s)	124, 1643
BsmAI	GTCTC	7 cut(s)	102, 313, 954, 1246, 1321, 1635, 2142
BsmBI	CGTCTC	3 cut(s)	102, 954, 1635
BsmFI	GGGAC	6 cut(s)	160, 486, 719, 1795, 2054, 2114
BsmI	GAATGC	1 cut(s)	343
BsnI	GGCC	3 cut(s)	5, 128, 363
Bso31I	GGTCTC	1 cut(s)	1246
BsoBI	CYCGRG	1 cut(s)	2097
Bsp119I	TTCGAA	1 cut(s)	970
Bsp1286I	GDGCHC	4 cut(s)	499, 556, 1561, 1612
Bsp13I	TCCGGA	1 cut(s)	424
Bsp143I	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
Bsp19I	CCATGG	1 cut(s)	805
BspACI	CCGC	2 cut(s)	490, 1185
BspANI	GGCC	3 cut(s)	5, 128, 363
BspCNI	CTCAG	4 cut(s)	246, 307, 679, 894
BspEI	TCCGGA	1 cut(s)	424
BspFNI	CGCG	1 cut(s)	490
BspOI	GCTAGC	2 cut(s)	753, 1964
BspPI	GGATC	2 cut(s)	1461, 1657
BspT104I	TTCGAA	1 cut(s)	970
BspTI	CTTAAG	1 cut(s)	280
BspTNI	GGTCTC	1 cut(s)	1246
BsrDI	GCAATG	2 cut(s)	1761, 1965
BsrI	ACTGG	1 cut(s)	1690
BssECI	CCNNGG	5 cut(s)	17, 42, 718, 805, 1113
BssMI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
BssNAI	GTATAC	1 cut(s)	741
BssNI	GRCGYC	4 cut(s)	95, 845, 947, 2103
BssT1I	CCWWGG	3 cut(s)	42, 718, 805
Bst1107I	GTATAC	1 cut(s)	741
Bst2UI	CCWGG	4 cut(s)	19, 935, 1638, 2053
Bst4CI	ACNGT	2 cut(s)	1117, 2045
Bst6I	CTCTTC	4 cut(s)	148, 365, 978, 1925
BstACI	GRCGYC	4 cut(s)	95, 845, 947, 2103
BstAFI	CTTAAG	1 cut(s)	280
BstBAI	YACGTR	1 cut(s)	293
BstBI	TTCGAA	1 cut(s)	970
BstC8I	GCNNGC	5 cut(s)	751, 1069, 1372, 1488, 1962
BstDEI	CTNAG	7 cut(s)	179, 233, 315, 666, 902, 1565, 1843
BstDSI	CCRYGG	2 cut(s)	805, 1113
BstF5I	GGATG	7 cut(s)	433, 598, 925, 1320, 1813, 1921, 2134
BstFNI	CGCG	1 cut(s)	490
BstH2I	RGCGCY	1 cut(s)	650
BstHHI	GCGC	3 cut(s)	490, 649, 1273
BstKTI	GATC	6 cut(s)	213, 714, 762, 1456, 1652, 1823
BstMAI	GTCTC	7 cut(s)	102, 313, 954, 1246, 1321, 1635, 2142
BstMBI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
BstMWI	GCNNNNNNNGC	5 cut(s)	494, 842, 1157, 1607, 2102
BstNI	CCWGG	4 cut(s)	19, 935, 1638, 2053
BstNSI	RCATGY	5 cut(s)	229, 326, 1071, 1374, 1575
BstSCI	CCNGG	6 cut(s)	17, 218, 933, 1636, 1749, 2051
BstSLI	GKGCMC	1 cut(s)	1561
BstUI	CGCG	1 cut(s)	490
BstV1I	GCAGC	3 cut(s)	823, 1144, 1388
BstV2I	GAAGAC	1 cut(s)	1501
BstX2I	RGATCY	2 cut(s)	1649, 1820
BstYI	RGATCY	2 cut(s)	1649, 1820
BstZ17I	GTATAC	1 cut(s)	741
BsuRI	GGCC	3 cut(s)	5, 128, 363
BtgI	CCRYGG	2 cut(s)	805, 1113
BtgZI	GCGATG	1 cut(s)	356
BtrI	CACGTC	1 cut(s)	82
BtsCI	GGATG	7 cut(s)	433, 598, 925, 1320, 1813, 1921, 2134
BtsI	GCAGTG	1 cut(s)	1559
BtsIMutI	CAGTG	2 cut(s)	516, 1559
Cac8I	GCNNGC	5 cut(s)	751, 1069, 1372, 1488, 1962
CfoI	GCGC	3 cut(s)	490, 649, 1273
Cfr13I	GGNCC	1 cut(s)	802
CseI	GACGC	2 cut(s)	834, 2111
CsiI	ACCWGGT	1 cut(s)	933
Csp6I	GTAC	4 cut(s)	223, 433, 1719, 1942
CviQI	GTAC	4 cut(s)	223, 433, 1719, 1942
DdeI	CTNAG	7 cut(s)	179, 233, 315, 666, 902, 1565, 1843
DpnI	GATC	6 cut(s)	212, 713, 761, 1455, 1651, 1822
DpnII	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
DraI	TTTAAA	1 cut(s)	913
DriI	GACNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	1 cut(s)	361
Eam1104I	CTCTTC	4 cut(s)	148, 365, 978, 1925
Eam1105I	GACNNNNNGTC	1 cut(s)	326
EarI	CTCTTC	4 cut(s)	148, 365, 978, 1925
Ecl136II	GAGCTC	1 cut(s)	1610
Eco130I	CCWWGG	3 cut(s)	42, 718, 805
Eco147I	AGGCCT	1 cut(s)	128
Eco24I	GRGCYC	2 cut(s)	499, 1612
Eco31I	GGTCTC	1 cut(s)	1246
Eco47I	GGWCC	1 cut(s)	802
Eco53kI	GAGCTC	1 cut(s)	1610
Eco57I	CTGAAG	2 cut(s)	1046, 1283
Eco88I	CYCGRG	1 cut(s)	2097
EcoICRI	GAGCTC	1 cut(s)	1610
EcoRI	GAATTC	2 cut(s)	1036, 1249
EcoRII	CCWGG	4 cut(s)	17, 933, 1636, 2051
EcoT14I	CCWWGG	3 cut(s)	42, 718, 805
EcoT38I	GRGCYC	2 cut(s)	499, 1612
ErhI	CCWWGG	3 cut(s)	42, 718, 805
Esp3I	CGTCTC	3 cut(s)	102, 954, 1635
FalI	AAGNNNNNCTT	2 cut(s)	392, 424
FaqI	GGGAC	6 cut(s)	160, 486, 719, 1795, 2054, 2114
FauNDI	CATATG	1 cut(s)	207
FbaI	TGATCA	3 cut(s)	210, 711, 759
FblI	GTMKAC	1 cut(s)	740
Fnu4HI	GCNGC	3 cut(s)	837, 1158, 1402
FokI	GGATG	7 cut(s)	440, 605, 912, 1327, 1800, 1928, 2141
FriOI	GRGCYC	2 cut(s)	499, 1612
Fsp4HI	GCNGC	3 cut(s)	837, 1158, 1402
FspBI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
FspI	TGCGCA	1 cut(s)	1272
GlaI	GCGC	3 cut(s)	489, 648, 1272
GluI	GCNGC	3 cut(s)	837, 1158, 1402
GsaI	CCCAGC	1 cut(s)	1484
GsuI	CTGGAG	3 cut(s)	545, 1620, 1821
HaeII	RGCGCY	1 cut(s)	650
HaeIII	GGCC	3 cut(s)	5, 128, 363
HapII	CCGG	3 cut(s)	219, 425, 1751
HgaI	GACGC	2 cut(s)	834, 2111
HhaI	GCGC	3 cut(s)	490, 649, 1273
Hin1I	GRCGYC	4 cut(s)	95, 845, 947, 2103
Hin6I	GCGC	3 cut(s)	488, 647, 1271
HinP1I	GCGC	3 cut(s)	488, 647, 1271
HincII	GTYRAC	2 cut(s)	1446, 1665
HindII	GTYRAC	2 cut(s)	1446, 1665
HinfI	GANTC	9 cut(s)	61, 151, 173, 610, 723, 896, 1015, 1022, 1696
HpaII	CCGG	3 cut(s)	219, 425, 1751
HphI	GGTGA	3 cut(s)	686, 695, 2059
Hpy166II	GTNNAC	8 cut(s)	435, 642, 741, 1446, 1577, 1665, 1774, 1786
Hpy188I	TCNGA	3 cut(s)	150, 903, 1035
Hpy8I	GTNNAC	8 cut(s)	435, 642, 741, 1446, 1577, 1665, 1774, 1786
Hpy99I	CGWCG	1 cut(s)	308
HpyAV	CCTTC	2 cut(s)	1088, 1612
HpyCH4III	ACNGT	2 cut(s)	1117, 2045
HpyCH4IV	ACGT	5 cut(s)	81, 95, 292, 437, 947
HpyF10VI	GCNNNNNNNGC	5 cut(s)	494, 842, 1157, 1607, 2102
HpyF3I	CTNAG	7 cut(s)	179, 233, 315, 666, 902, 1565, 1843
HpySE526I	ACGT	5 cut(s)	81, 95, 292, 437, 947
Hsp92I	GRCGYC	4 cut(s)	95, 845, 947, 2103
HspAI	GCGC	3 cut(s)	488, 647, 1271
Kpn2I	TCCGGA	1 cut(s)	424
Ksp22I	TGATCA	3 cut(s)	210, 711, 759
Kzo9I	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
LmnI	GCTCC	1 cut(s)	1639
Lsp1109I	GCAGC	3 cut(s)	823, 1144, 1388
LweI	GCATC	6 cut(s)	583, 762, 934, 1207, 1495, 2013
MabI	ACCWGGT	1 cut(s)	933
MaeI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
MaeII	ACGT	5 cut(s)	81, 95, 292, 437, 947
MaeIII	GTNAC	8 cut(s)	52, 659, 846, 937, 1117, 1345, 1902, 2065
MalI	GATC	6 cut(s)	212, 713, 761, 1455, 1651, 1822
MboI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
MflI	RGATCY	2 cut(s)	1649, 1820
MhlI	GDGCHC	4 cut(s)	499, 556, 1561, 1612
MlsI	TGGCCA	1 cut(s)	363
MluNI	TGGCCA	1 cut(s)	363
MlyI	GAGTC	4 cut(s)	55, 182, 732, 1705
Mox20I	TGGCCA	1 cut(s)	363
MroI	TCCGGA	1 cut(s)	424
MroXI	GAANNNNTTC	1 cut(s)	1296
MscI	TGGCCA	1 cut(s)	363
MseI	TTAA	7 cut(s)	281, 785, 912, 1167, 1982, 2028, 2124
MslI	CAYNNNNRTG	3 cut(s)	675, 1146, 1793
Msp20I	TGGCCA	1 cut(s)	363
MspCI	CTTAAG	1 cut(s)	280
MspI	CCGG	3 cut(s)	219, 425, 1751
MspR9I	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
Mva1269I	GAATGC	1 cut(s)	343
MvaI	CCWGG	4 cut(s)	19, 935, 1638, 2053
MvnI	CGCG	1 cut(s)	490
MwoI	GCNNNNNNNGC	5 cut(s)	494, 842, 1157, 1607, 2102
NciI	CCSGG	2 cut(s)	220, 1751
NcoI	CCATGG	1 cut(s)	805
NdeI	CATATG	1 cut(s)	207
NdeII	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
NheI	GCTAGC	2 cut(s)	749, 1960
NmuCI	GTSAC	3 cut(s)	846, 1117, 2065
NsbI	TGCGCA	1 cut(s)	1272
NspI	RCATGY	5 cut(s)	229, 326, 1071, 1374, 1575
NspV	TTCGAA	1 cut(s)	970
PaeI	GCATGC	2 cut(s)	1071, 1374
PceI	AGGCCT	1 cut(s)	128
PciI	ACATGT	1 cut(s)	322
PctI	GAATGC	1 cut(s)	343
PdmI	GAANNNNTTC	1 cut(s)	1296
PfeI	GAWTC	5 cut(s)	151, 610, 896, 1015, 1022
PflFI	GACNNNGTC	1 cut(s)	172
PfoI	TCCNGGA	2 cut(s)	1636, 2051
PkrI	GCNGC	3 cut(s)	838, 1159, 1403
PleI	GAGTC	4 cut(s)	55, 181, 731, 1704
PpsI	GAGTC	4 cut(s)	55, 181, 731, 1704
Ppu21I	YACGTR	1 cut(s)	293
PscI	ACATGT	1 cut(s)	322
PshBI	ATTAAT	1 cut(s)	1982
Psp124BI	GAGCTC	1 cut(s)	1612
Psp6I	CCWGG	4 cut(s)	17, 933, 1636, 2051
PspFI	CCCAGC	1 cut(s)	1480
PspGI	CCWGG	4 cut(s)	17, 933, 1636, 2051
PspPI	GGNCC	1 cut(s)	802
PsuI	RGATCY	2 cut(s)	1649, 1820
PsyI	GACNNNGTC	1 cut(s)	172
RsaI	GTAC	4 cut(s)	224, 434, 1720, 1943
RsaNI	GTAC	4 cut(s)	223, 433, 1719, 1942
RseI	CAYNNNNRTG	3 cut(s)	675, 1146, 1793
SacI	GAGCTC	1 cut(s)	1612
SaqAI	TTAA	7 cut(s)	281, 785, 912, 1167, 1982, 2028, 2124
SatI	GCNGC	3 cut(s)	837, 1158, 1402
Sau3AI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
Sau96I	GGNCC	1 cut(s)	802
SchI	GAGTC	4 cut(s)	55, 182, 732, 1705
ScrFI	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
SduI	GDGCHC	4 cut(s)	499, 556, 1561, 1612
SexAI	ACCWGGT	1 cut(s)	933
SfaNI	GCATC	6 cut(s)	583, 762, 934, 1207, 1495, 2013
SfuI	TTCGAA	1 cut(s)	970
SinI	GGWCC	1 cut(s)	802
SmiMI	CAYNNNNRTG	3 cut(s)	675, 1146, 1793
SmlI	CTYRAG	4 cut(s)	280, 692, 1072, 1324
SmoI	CTYRAG	4 cut(s)	280, 692, 1072, 1324
SphI	GCATGC	2 cut(s)	1071, 1374
SseBI	AGGCCT	1 cut(s)	128
SsiI	CCGC	2 cut(s)	490, 1185
SspI	AATATT	2 cut(s)	1438, 1872
SspMI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
SstI	GAGCTC	1 cut(s)	1612
StuI	AGGCCT	1 cut(s)	128
StyD4I	CCNGG	6 cut(s)	17, 218, 933, 1636, 1749, 2051
StyI	CCWWGG	3 cut(s)	42, 718, 805
TaaI	ACNGT	2 cut(s)	1117, 2045
TaiI	ACGT	5 cut(s)	84, 98, 295, 440, 950
TaqI	TCGA	4 cut(s)	303, 443, 608, 970
TatI	WGTACW	3 cut(s)	432, 1718, 1941
TfiI	GAWTC	5 cut(s)	151, 610, 896, 1015, 1022
Tru1I	TTAA	7 cut(s)	281, 785, 912, 1167, 1982, 2028, 2124
Tru9I	TTAA	7 cut(s)	281, 785, 912, 1167, 1982, 2028, 2124
TscAI	CASTG	2 cut(s)	516, 1566
TseFI	GTSAC	3 cut(s)	846, 1117, 2065
TseI	GCWGC	3 cut(s)	836, 1157, 1401
Tsp45I	GTSAC	3 cut(s)	846, 1117, 2065
TspGWI	ACGGA	1 cut(s)	1659
TspRI	CASTG	2 cut(s)	516, 1566
Tth111I	GACNNNGTC	1 cut(s)	172
Vha464I	CTTAAG	1 cut(s)	280
VpaK11BI	GGWCC	1 cut(s)	802
VspI	ATTAAT	1 cut(s)	1982
XapI	RAATTY	7 cut(s)	1036, 1104, 1124, 1249, 1407, 1736, 2060
XbaI	TCTAGA	1 cut(s)	1823
XceI	RCATGY	5 cut(s)	229, 326, 1071, 1374, 1575
XmiI	GTMKAC	1 cut(s)	740
XmnI	GAANNNNTTC	1 cut(s)	1296
XspI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
ZraI	GACGTC	2 cut(s)	96, 948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.