Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0016599

Physical Location & Seq

Genomic Coordinates Reverse (-)

22522172 .. 22532918

Gene Structure 10747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG223800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGCCTTTGGTTTCCCCAGGCATTTCAATTTGTTTGCAACCTTGGAAATTGTAACACCAACTCTAAACCAACTCTCCCACGTCAAGTCCTTGACATCTCTTGCCCATAACACAAGCCACACAGAGGCCTCAAACTTTTACTCTTCTCTGATTCAACAATGCACACGGACAGAGTCCCTAAGAGGCTTGGGAATAGTTCAAACCCATATGATCAAATCCGGGTACATGCAACTCAGTATAGCCAATAGGCTCGTTGATGGGTGTTTGAAATGTGGTAGCTTAAGTAATGCACGTAAGGTGTTCGACGAATTGCCTGAGAGACATGTAGTCATCTGGAATGCGATGATTTCTTCATACATTGGCCACAAGAAGAGTAAGGAGGCTATTGGGTTGTATGGGAAGATGGTCTTTGATGGAGTTTTGCCGGATGAGTACACGTTTTCGAGTGTTTTCAAGGCTTTTTCGGGTCTGGGTCTTGTATATGAAGCGCGGAGGGCTCATGGGTTGTCAGTGGTTTTGGGTCTGGAGGTGGCAAATGTGTTTGTTGGTAGTGCTCTTGTTGATATGTATGCAAAGTTTGGTAGAATGGGGGATGCAAGGTTGGTGTCGAATCGCGTTGGGGAGAAAGATGTTGTTTTGTTTACAGCGCTGATTGTTGGTTACTCTCAGCATGGTGATGATGGTGAAGCTCTTGAGGTTTTTGGGGACATGATCAACCAAGGAGTTAAGGCTAATGAGTATACTTTTGCTAGCATCTTGATCACTTGTGGGAACTTGGAGGATTTAACTCATGGTAAGTTGGTCCATGGTCTTGTTGTCAAATCTGGTTGTGAAGCTGCTGTGGCGTCACAGACTTCACTTCTAACAATGTATGCTAGGTGTGGATTGATTGATGATTCTCTGAGGATTTTTAAAAGGTTTCATCATCCAAACCTGGTAACTTGGACGTCTCTTATAGTGGCTCTTGTTCGGAATGGTAGAGAAGAGTTGGCTTTGATAAAGTTTAGAAAGATGATTCGGGATTCAGTAGTTCCAAATTCTTTTACTTTATCTAGTGTTCTTCAGGCATGCTCAAGCCTTGCTATGATGGATGAAGGACAGCAAATTCATGCCATGGTCACAAAGTTCGGATTAGATAGACACATATTTGCTGGTGCTGCTCTCATTAACTTGTATGGGAAATGCGGAAATACAGAGATGGCAAGGTCAGTTTTTGATGCCTTGATTGAAATTGATTTGGTCTCCGTGAATTCCATGATATATAGCTATGCGCAGAATGGATTTGGACATGAAGCACTTCAGCTTTTTGATGGGATGAAAGACTTGAGACTTGAACCAAACGATGTTACAATTTTGAGTGTTCTCTTGGCATGCAATAATTCAGGATTGGTGCAACAAGGCTGCCAAATTTTTTCTACCATTAGGAGTAATCACAATATTGAGTTGACAAGGGATCACTATGCTTGTATGGTTGATTTGCTGGGGCGTGCTGGAAGACTTGAAGATGCCGAAATGTTGATAAAGGAAGTCAAAAATCCAGATTTAGTATTATGGAGGGCACTGCTAAGTGCATGTAAACTTCATGGACAGGTTGAGATGGCAGAAAGAGCTCTAAAGAAGGTGCTTGAACTTGCTCCAGGAGACGGAGGATCTCATGTCCTGTTGACAAATCTTTATGCTTCAAATGGTAATTGGAGTCAAGTTATTGATATGAAAAGTACAATGAGGGAGATGAAATTCCAGAAGAACCCGGCAATGAGTTGGGTTGATGTGGACAGGGAGGTTCACACTTTCATGGCTGGAGATTTGTCCCATTCAAGATCTAGAGAGATAAATGAAACCTTAGAGAAATTGTTTGAGGAGGTGCAAATATTGGGTTATGTTCCTGATACAAGATTTGTGTTACAGGATTTGGATGAGGAGAAGAAGAAGAGGTCATTGTACTATCACAGCGAAAAGCTAGCCATTGCCTTTGCTCTATTAATGAGTAGTAAAAAGAATACCATCATCAGGATATTCAAGAACCTTAAAGTTTGTGGCGACTGTCATTCCTGGATAAAATTTGTCACCAGAGTTATTGGGAGAGATATAATTGCTCGGGACGCTAAAAGATTTCATCATTTTAAGGATGGGTGTTGTTCCTGTAGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

719

Amino Acids

80.33

Weight (kDa)

7.84

Isoelectric Point (pI)

33.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	108 - 154	6.6e-12	PPR repeat family
PPR_2	PF13041	209 - 254	1.7e-08	PPR repeat family
PPR_3	PF13812	209 - 258	8.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	310 - 358	5.9e-08	PPR repeat family
PPR_2	PF13041	412 - 457	1.7e-06	PPR repeat family
PPR	PF01535	414 - 442	6.1e-06	PPR repeat
E_motif	PF20431	528 - 590	4.8e-14	E motif
DYW_deaminase	PF14432	626 - 719	4.2e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65570
malus_domestica	MD15G1309800.v1.1
prunus_persica	Prupe.6G204100_v2.0.a1 Prupe.6G204100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110721
rosa_laevigata	RLG00000017836
rosa_multiflora	Rmu_sc0000389.1_g000048
rosa_rugosa	Rorug02G0168100 Rorug02G0169300
rosa_samantha	Rh2AG221300 Rh2BG231500 Rh2CG223800 Rh2DG227500
rosa_wichuraiana	Rw2G017090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	950
Acc16I	TGCGCA	1 cut(s)	1272
AccI	GTMKAC	1 cut(s)	740
AccII	CGCG	2 cut(s)	490, 615
AciI	CCGC	2 cut(s)	490, 1185
AclWI	GGATC	2 cut(s)	1461, 1657
AcoI	YGGCCR	1 cut(s)	361
AcsI	RAATTY	6 cut(s)	1036, 1104, 1249, 1407, 1736, 2060
AcuI	CTGAAG	2 cut(s)	1046, 1283
AcyI	GRCGYC	2 cut(s)	845, 947
AfaI	GTAC	4 cut(s)	224, 434, 1720, 1943
AfeI	AGCGCT	1 cut(s)	648
AfiI	CCNNNNNNNGG	3 cut(s)	124, 1643, 2010
AflII	CTTAAG	1 cut(s)	280
AflIII	ACRYGT	2 cut(s)	322, 435
AhdI	GACNNNNNGTC	1 cut(s)	326
AjiI	CACGTC	1 cut(s)	82
AjnI	CCWGG	4 cut(s)	17, 933, 1636, 2051
AluBI	AGCT	7 cut(s)	279, 689, 836, 1266, 1303, 1610, 1960
AluI	AGCT	7 cut(s)	279, 689, 836, 1266, 1303, 1610, 1960
Alw21I	GWGCWC	2 cut(s)	556, 1612
Alw26I	GTCTC	5 cut(s)	313, 954, 1246, 1321, 1635
AlwI	GGATC	2 cut(s)	1461, 1657
Ama87I	CYCGRG	1 cut(s)	2097
Aor51HI	AGCGCT	1 cut(s)	648
AoxI	GGCC	3 cut(s)	3, 126, 361
ApeKI	GCWGC	3 cut(s)	836, 1157, 1401
ApoI	RAATTY	6 cut(s)	1036, 1104, 1249, 1407, 1736, 2060
AseI	ATTAAT	1 cut(s)	1982
Asp700I	GAANNNNTTC	1 cut(s)	1296
AspLEI	GCGC	3 cut(s)	490, 649, 1273
AspS9I	GGNCC	1 cut(s)	802
AsuC2I	CCSGG	2 cut(s)	220, 1751
AsuHPI	GGTGA	3 cut(s)	686, 695, 2059
AsuNHI	GCTAGC	2 cut(s)	749, 1960
AvaI	CYCGRG	1 cut(s)	2097
AvaII	GGWCC	1 cut(s)	802
BaeGI	GKGCMC	1 cut(s)	1561
BalI	TGGCCA	1 cut(s)	363
BanII	GRGCYC	2 cut(s)	499, 1612
BbsI	GAAGAC	1 cut(s)	1501
Bbv12I	GWGCWC	2 cut(s)	556, 1612
BbvI	GCAGC	3 cut(s)	823, 1144, 1388
BciT130I	CCWGG	4 cut(s)	19, 935, 1638, 2053
BclI	TGATCA	3 cut(s)	210, 711, 759
BcnI	CCSGG	2 cut(s)	220, 1751
BcoDI	GTCTC	5 cut(s)	313, 954, 1246, 1321, 1635
BfaI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
BfmI	CTRYAG	1 cut(s)	2143
BfoI	RGCGCY	1 cut(s)	650
BfrI	CTTAAG	1 cut(s)	280
BglII	AGATCT	1 cut(s)	1820
BisI	GCNGC	3 cut(s)	837, 1158, 1402
BlsI	GCNGC	3 cut(s)	838, 1159, 1403
Bme1390I	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
Bme18I	GGWCC	1 cut(s)	802
BmeRI	GACNNNNNGTC	1 cut(s)	326
BmeT110I	CYCGRG	1 cut(s)	2097
BmgBI	CACGTC	1 cut(s)	82
BmgT120I	GGNCC	1 cut(s)	802
BmrFI	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
BmsI	GCATC	4 cut(s)	583, 762, 1207, 1495
BmtI	GCTAGC	2 cut(s)	753, 1964
BpiI	GAAGAC	1 cut(s)	1501
BpmI	CTGGAG	3 cut(s)	545, 1620, 1821
BpuEI	CTTGAG	3 cut(s)	713, 1057, 1345
BpuMI	CCSGG	2 cut(s)	220, 1751
BsaAI	YACGTR	1 cut(s)	293
BsaHI	GRCGYC	2 cut(s)	845, 947
BsaI	GGTCTC	1 cut(s)	1246
BsaJI	CCNNGG	5 cut(s)	17, 42, 718, 805, 1113
BsaXI	ACNNNNNCTCC	2 cut(s)	59, 89
Bsc4I	CCNNNNNNNGG	3 cut(s)	124, 1643, 2010
Bse3DI	GCAATG	2 cut(s)	1761, 1965
BseBI	CCWGG	4 cut(s)	19, 935, 1638, 2053
BseDI	CCNNGG	5 cut(s)	17, 42, 718, 805, 1113
BseGI	GGATG	7 cut(s)	433, 598, 925, 1096, 1320, 1921, 2134
BseLI	CCNNNNNNNGG	3 cut(s)	124, 1643, 2010
BseMI	GCAATG	2 cut(s)	1761, 1965
BseMII	CTCAG	4 cut(s)	247, 306, 680, 893
BseRI	GAGGAG	2 cut(s)	1874, 1934
BseSI	GKGCMC	1 cut(s)	1561
BseXI	GCAGC	3 cut(s)	823, 1144, 1388
BseYI	CCCAGC	1 cut(s)	1480
Bsh1236I	CGCG	2 cut(s)	490, 615
BshFI	GGCC	3 cut(s)	5, 128, 363
BsiHKAI	GWGCWC	2 cut(s)	556, 1612
BsiHKCI	CYCGRG	1 cut(s)	2097
BsiSI	CCGG	3 cut(s)	219, 425, 1751
BslFI	GGGAC	4 cut(s)	160, 719, 1795, 2114
BslI	CCNNNNNNNGG	3 cut(s)	124, 1643, 2010
BsmAI	GTCTC	5 cut(s)	313, 954, 1246, 1321, 1635
BsmBI	CGTCTC	2 cut(s)	954, 1635
BsmFI	GGGAC	4 cut(s)	160, 719, 1795, 2114
BsmI	GAATGC	1 cut(s)	343
BsnI	GGCC	3 cut(s)	5, 128, 363
Bso31I	GGTCTC	1 cut(s)	1246
BsoBI	CYCGRG	1 cut(s)	2097
Bsp1286I	GDGCHC	4 cut(s)	499, 556, 1561, 1612
Bsp143I	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
Bsp19I	CCATGG	2 cut(s)	805, 1113
BspACI	CCGC	2 cut(s)	490, 1185
BspANI	GGCC	3 cut(s)	5, 128, 363
BspCNI	CTCAG	4 cut(s)	246, 307, 679, 894
BspFNI	CGCG	2 cut(s)	490, 615
BspOI	GCTAGC	2 cut(s)	753, 1964
BspPI	GGATC	2 cut(s)	1461, 1657
BspTI	CTTAAG	1 cut(s)	280
BspTNI	GGTCTC	1 cut(s)	1246
BsrDI	GCAATG	2 cut(s)	1761, 1965
BssECI	CCNNGG	5 cut(s)	17, 42, 718, 805, 1113
BssMI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
BssNAI	GTATAC	1 cut(s)	741
BssNI	GRCGYC	2 cut(s)	845, 947
BssT1I	CCWWGG	4 cut(s)	42, 718, 805, 1113
Bst1107I	GTATAC	1 cut(s)	741
Bst2UI	CCWGG	4 cut(s)	19, 935, 1638, 2053
Bst4CI	ACNGT	1 cut(s)	2045
Bst6I	CTCTTC	4 cut(s)	148, 365, 978, 1925
BstACI	GRCGYC	2 cut(s)	845, 947
BstAFI	CTTAAG	1 cut(s)	280
BstBAI	YACGTR	1 cut(s)	293
BstC8I	GCNNGC	5 cut(s)	751, 1069, 1372, 1488, 1962
BstDEI	CTNAG	7 cut(s)	179, 233, 315, 666, 902, 1565, 1843
BstDSI	CCRYGG	2 cut(s)	805, 1113
BstF5I	GGATG	7 cut(s)	433, 598, 925, 1096, 1320, 1921, 2134
BstFNI	CGCG	2 cut(s)	490, 615
BstH2I	RGCGCY	1 cut(s)	650
BstHHI	GCGC	3 cut(s)	490, 649, 1273
BstKTI	GATC	6 cut(s)	213, 714, 762, 1456, 1652, 1823
BstMAI	GTCTC	5 cut(s)	313, 954, 1246, 1321, 1635
BstMBI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
BstMWI	GCNNNNNNNGC	5 cut(s)	494, 842, 1157, 1607, 2102
BstNI	CCWGG	4 cut(s)	19, 935, 1638, 2053
BstNSI	RCATGY	5 cut(s)	229, 326, 1071, 1374, 1575
BstSCI	CCNGG	6 cut(s)	17, 218, 933, 1636, 1749, 2051
BstSFI	CTRYAG	1 cut(s)	2143
BstSLI	GKGCMC	1 cut(s)	1561
BstUI	CGCG	2 cut(s)	490, 615
BstV1I	GCAGC	3 cut(s)	823, 1144, 1388
BstV2I	GAAGAC	1 cut(s)	1501
BstX2I	RGATCY	2 cut(s)	1649, 1820
BstYI	RGATCY	2 cut(s)	1649, 1820
BstZ17I	GTATAC	1 cut(s)	741
BsuRI	GGCC	3 cut(s)	5, 128, 363
BtgI	CCRYGG	2 cut(s)	805, 1113
BtgZI	GCGATG	1 cut(s)	356
BtrI	CACGTC	1 cut(s)	82
BtsCI	GGATG	7 cut(s)	433, 598, 925, 1096, 1320, 1921, 2134
BtsI	GCAGTG	1 cut(s)	1559
BtsIMutI	CAGTG	2 cut(s)	516, 1559
Cac8I	GCNNGC	5 cut(s)	751, 1069, 1372, 1488, 1962
CfoI	GCGC	3 cut(s)	490, 649, 1273
Cfr13I	GGNCC	1 cut(s)	802
CseI	GACGC	2 cut(s)	834, 2111
CsiI	ACCWGGT	1 cut(s)	933
Csp6I	GTAC	4 cut(s)	223, 433, 1719, 1942
CviQI	GTAC	4 cut(s)	223, 433, 1719, 1942
DdeI	CTNAG	7 cut(s)	179, 233, 315, 666, 902, 1565, 1843
DpnI	GATC	6 cut(s)	212, 713, 761, 1455, 1651, 1822
DpnII	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
DraI	TTTAAA	1 cut(s)	913
DriI	GACNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	1 cut(s)	361
Eam1104I	CTCTTC	4 cut(s)	148, 365, 978, 1925
Eam1105I	GACNNNNNGTC	1 cut(s)	326
EarI	CTCTTC	4 cut(s)	148, 365, 978, 1925
Ecl136II	GAGCTC	1 cut(s)	1610
Eco130I	CCWWGG	4 cut(s)	42, 718, 805, 1113
Eco147I	AGGCCT	1 cut(s)	128
Eco24I	GRGCYC	2 cut(s)	499, 1612
Eco31I	GGTCTC	1 cut(s)	1246
Eco47I	GGWCC	1 cut(s)	802
Eco47III	AGCGCT	1 cut(s)	648
Eco53kI	GAGCTC	1 cut(s)	1610
Eco57I	CTGAAG	2 cut(s)	1046, 1283
Eco88I	CYCGRG	1 cut(s)	2097
EcoICRI	GAGCTC	1 cut(s)	1610
EcoRI	GAATTC	1 cut(s)	1249
EcoRII	CCWGG	4 cut(s)	17, 933, 1636, 2051
EcoT14I	CCWWGG	4 cut(s)	42, 718, 805, 1113
EcoT38I	GRGCYC	2 cut(s)	499, 1612
ErhI	CCWWGG	4 cut(s)	42, 718, 805, 1113
Esp3I	CGTCTC	2 cut(s)	954, 1635
FalI	AAGNNNNNCTT	2 cut(s)	392, 424
FaqI	GGGAC	4 cut(s)	160, 719, 1795, 2114
FauNDI	CATATG	1 cut(s)	207
FbaI	TGATCA	3 cut(s)	210, 711, 759
FblI	GTMKAC	1 cut(s)	740
Fnu4HI	GCNGC	3 cut(s)	837, 1158, 1402
FokI	GGATG	7 cut(s)	440, 605, 912, 1103, 1327, 1928, 2141
FriOI	GRGCYC	2 cut(s)	499, 1612
Fsp4HI	GCNGC	3 cut(s)	837, 1158, 1402
FspBI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
FspI	TGCGCA	1 cut(s)	1272
GlaI	GCGC	3 cut(s)	489, 648, 1272
GluI	GCNGC	3 cut(s)	837, 1158, 1402
GsaI	CCCAGC	1 cut(s)	1484
GsuI	CTGGAG	3 cut(s)	545, 1620, 1821
HaeII	RGCGCY	1 cut(s)	650
HaeIII	GGCC	3 cut(s)	5, 128, 363
HapII	CCGG	3 cut(s)	219, 425, 1751
HgaI	GACGC	2 cut(s)	834, 2111
HhaI	GCGC	3 cut(s)	490, 649, 1273
Hin1I	GRCGYC	2 cut(s)	845, 947
Hin6I	GCGC	3 cut(s)	488, 647, 1271
HinP1I	GCGC	3 cut(s)	488, 647, 1271
HincII	GTYRAC	2 cut(s)	1446, 1665
HindII	GTYRAC	2 cut(s)	1446, 1665
HinfI	GANTC	7 cut(s)	151, 173, 610, 896, 1015, 1022, 1696
HpaII	CCGG	3 cut(s)	219, 425, 1751
HphI	GGTGA	3 cut(s)	686, 695, 2059
Hpy166II	GTNNAC	8 cut(s)	435, 642, 741, 1446, 1577, 1665, 1774, 1786
Hpy188I	TCNGA	4 cut(s)	150, 903, 972, 1130
Hpy8I	GTNNAC	8 cut(s)	435, 642, 741, 1446, 1577, 1665, 1774, 1786
Hpy99I	CGWCG	1 cut(s)	308
HpyAV	CCTTC	2 cut(s)	1088, 1612
HpyCH4III	ACNGT	1 cut(s)	2045
HpyCH4IV	ACGT	4 cut(s)	81, 292, 437, 947
HpyF10VI	GCNNNNNNNGC	5 cut(s)	494, 842, 1157, 1607, 2102
HpyF3I	CTNAG	7 cut(s)	179, 233, 315, 666, 902, 1565, 1843
HpySE526I	ACGT	4 cut(s)	81, 292, 437, 947
Hsp92I	GRCGYC	2 cut(s)	845, 947
HspAI	GCGC	3 cut(s)	488, 647, 1271
Ksp22I	TGATCA	3 cut(s)	210, 711, 759
Kzo9I	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
LmnI	GCTCC	1 cut(s)	1639
Lsp1109I	GCAGC	3 cut(s)	823, 1144, 1388
LweI	GCATC	4 cut(s)	583, 762, 1207, 1495
MabI	ACCWGGT	1 cut(s)	933
MaeI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
MaeII	ACGT	4 cut(s)	81, 292, 437, 947
MaeIII	GTNAC	8 cut(s)	52, 659, 846, 937, 1117, 1345, 1902, 2065
MalI	GATC	6 cut(s)	212, 713, 761, 1455, 1651, 1822
MboI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
MflI	RGATCY	2 cut(s)	1649, 1820
MhlI	GDGCHC	4 cut(s)	499, 556, 1561, 1612
MlsI	TGGCCA	1 cut(s)	363
MluNI	TGGCCA	1 cut(s)	363
MlyI	GAGTC	2 cut(s)	182, 1705
Mox20I	TGGCCA	1 cut(s)	363
MroXI	GAANNNNTTC	1 cut(s)	1296
MscI	TGGCCA	1 cut(s)	363
MseI	TTAA	8 cut(s)	281, 726, 785, 912, 1167, 1982, 2028, 2124
MslI	CAYNNNNRTG	2 cut(s)	675, 1793
Msp20I	TGGCCA	1 cut(s)	363
MspCI	CTTAAG	1 cut(s)	280
MspI	CCGG	3 cut(s)	219, 425, 1751
MspR9I	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
Mva1269I	GAATGC	1 cut(s)	343
MvaI	CCWGG	4 cut(s)	19, 935, 1638, 2053
MvnI	CGCG	2 cut(s)	490, 615
MwoI	GCNNNNNNNGC	5 cut(s)	494, 842, 1157, 1607, 2102
NciI	CCSGG	2 cut(s)	220, 1751
NcoI	CCATGG	2 cut(s)	805, 1113
NdeI	CATATG	1 cut(s)	207
NdeII	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
NheI	GCTAGC	2 cut(s)	749, 1960
NmuCI	GTSAC	3 cut(s)	846, 1117, 2065
NsbI	TGCGCA	1 cut(s)	1272
NspI	RCATGY	5 cut(s)	229, 326, 1071, 1374, 1575
PaeI	GCATGC	2 cut(s)	1071, 1374
PceI	AGGCCT	1 cut(s)	128
PciI	ACATGT	1 cut(s)	322
PctI	GAATGC	1 cut(s)	343
PdmI	GAANNNNTTC	1 cut(s)	1296
PfeI	GAWTC	5 cut(s)	151, 610, 896, 1015, 1022
PflFI	GACNNNGTC	1 cut(s)	172
PfoI	TCCNGGA	2 cut(s)	1636, 2051
PkrI	GCNGC	3 cut(s)	838, 1159, 1403
PleI	GAGTC	2 cut(s)	181, 1704
PpsI	GAGTC	2 cut(s)	181, 1704
Ppu21I	YACGTR	1 cut(s)	293
PscI	ACATGT	1 cut(s)	322
PshBI	ATTAAT	1 cut(s)	1982
Psp124BI	GAGCTC	1 cut(s)	1612
Psp6I	CCWGG	4 cut(s)	17, 933, 1636, 2051
PspFI	CCCAGC	1 cut(s)	1480
PspGI	CCWGG	4 cut(s)	17, 933, 1636, 2051
PspPI	GGNCC	1 cut(s)	802
PsuI	RGATCY	2 cut(s)	1649, 1820
PsyI	GACNNNGTC	1 cut(s)	172
RsaI	GTAC	4 cut(s)	224, 434, 1720, 1943
RsaNI	GTAC	4 cut(s)	223, 433, 1719, 1942
RseI	CAYNNNNRTG	2 cut(s)	675, 1793
SacI	GAGCTC	1 cut(s)	1612
SaqAI	TTAA	8 cut(s)	281, 726, 785, 912, 1167, 1982, 2028, 2124
SatI	GCNGC	3 cut(s)	837, 1158, 1402
Sau3AI	GATC	6 cut(s)	210, 711, 759, 1453, 1649, 1820
Sau96I	GGNCC	1 cut(s)	802
SchI	GAGTC	2 cut(s)	182, 1705
ScrFI	CCNGG	6 cut(s)	19, 220, 935, 1638, 1751, 2053
SduI	GDGCHC	4 cut(s)	499, 556, 1561, 1612
SexAI	ACCWGGT	1 cut(s)	933
SfaNI	GCATC	4 cut(s)	583, 762, 1207, 1495
SfcI	CTRYAG	1 cut(s)	2143
SinI	GGWCC	1 cut(s)	802
SmiMI	CAYNNNNRTG	2 cut(s)	675, 1793
SmlI	CTYRAG	4 cut(s)	280, 692, 1072, 1324
SmoI	CTYRAG	4 cut(s)	280, 692, 1072, 1324
SphI	GCATGC	2 cut(s)	1071, 1374
SseBI	AGGCCT	1 cut(s)	128
SsiI	CCGC	2 cut(s)	490, 1185
SspI	AATATT	2 cut(s)	1438, 1872
SspMI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
SstI	GAGCTC	1 cut(s)	1612
StuI	AGGCCT	1 cut(s)	128
StyD4I	CCNGG	6 cut(s)	17, 218, 933, 1636, 1749, 2051
StyI	CCWWGG	4 cut(s)	42, 718, 805, 1113
TaaI	ACNGT	1 cut(s)	2045
TaiI	ACGT	4 cut(s)	84, 295, 440, 950
TaqI	TCGA	3 cut(s)	303, 443, 608
TatI	WGTACW	3 cut(s)	432, 1718, 1941
TfiI	GAWTC	5 cut(s)	151, 610, 896, 1015, 1022
Tru1I	TTAA	8 cut(s)	281, 726, 785, 912, 1167, 1982, 2028, 2124
Tru9I	TTAA	8 cut(s)	281, 726, 785, 912, 1167, 1982, 2028, 2124
TscAI	CASTG	2 cut(s)	516, 1566
TseFI	GTSAC	3 cut(s)	846, 1117, 2065
TseI	GCWGC	3 cut(s)	836, 1157, 1401
Tsp45I	GTSAC	3 cut(s)	846, 1117, 2065
TspGWI	ACGGA	3 cut(s)	181, 1234, 1659
TspRI	CASTG	2 cut(s)	516, 1566
Tth111I	GACNNNGTC	1 cut(s)	172
Vha464I	CTTAAG	1 cut(s)	280
VpaK11BI	GGWCC	1 cut(s)	802
VspI	ATTAAT	1 cut(s)	1982
XapI	RAATTY	6 cut(s)	1036, 1104, 1249, 1407, 1736, 2060
XbaI	TCTAGA	1 cut(s)	1823
XceI	RCATGY	5 cut(s)	229, 326, 1071, 1374, 1575
XmiI	GTMKAC	1 cut(s)	740
XmnI	GAANNNNTTC	1 cut(s)	1296
XspI	CTAG	5 cut(s)	750, 876, 1053, 1824, 1961
ZraI	GACGTC	1 cut(s)	948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.