pentatricopeptide
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65570 |
| malus_domestica | MD15G1309800.v1.1 |
| prunus_persica | Prupe.6G204100_v2.0.a1 Prupe.6G204100_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0110721 |
| rosa_laevigata | RLG00000017836 |
| rosa_multiflora | Rmu_sc0000389.1_g000048 |
| rosa_rugosa | Rorug02G0168100 Rorug02G0169300 |
| rosa_samantha | Rh2AG221300 Rh2BG231500 Rh2CG223800 Rh2DG227500 |
| rosa_wichuraiana | Rw2G017090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 316 |
| AcsI | RAATTY | 1 cut(s) | 335 |
| AcuI | CTGAAG | 1 cut(s) | 144 |
| AfaI | GTAC | 1 cut(s) | 129 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 107, 150, 286 |
| AgeI | ACCGGT | 1 cut(s) | 283 |
| AgsI | TTSAA | 3 cut(s) | 119, 307, 341 |
| AjnI | CCWGG | 2 cut(s) | 15, 294 |
| AluBI | AGCT | 1 cut(s) | 122 |
| AluI | AGCT | 1 cut(s) | 122 |
| AlwI | GGATC | 1 cut(s) | 316 |
| ApoI | RAATTY | 1 cut(s) | 335 |
| AsiGI | ACCGGT | 1 cut(s) | 283 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 95 |
| AspS9I | GGNCC | 1 cut(s) | 292 |
| AsuHPI | GGTGA | 3 cut(s) | 227, 268, 344 |
| AvaII | GGWCC | 1 cut(s) | 292 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 111, 143 |
| BbsI | GAAGAC | 1 cut(s) | 306 |
| BciT130I | CCWGG | 2 cut(s) | 17, 296 |
| BfaI | CTAG | 2 cut(s) | 75, 326 |
| Bme1390I | CCNGG | 2 cut(s) | 17, 296 |
| Bme18I | GGWCC | 1 cut(s) | 292 |
| BmgT120I | GGNCC | 1 cut(s) | 292 |
| BmiI | GGNNCC | 1 cut(s) | 139 |
| BmrFI | CCNGG | 2 cut(s) | 17, 296 |
| BpiI | GAAGAC | 1 cut(s) | 306 |
| BsaJI | CCNNGG | 1 cut(s) | 242 |
| BsaWI | WCCGGW | 1 cut(s) | 283 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 107, 150, 286 |
| Bse118I | RCCGGY | 2 cut(s) | 256, 283 |
| BseBI | CCWGG | 2 cut(s) | 17, 296 |
| BseDI | CCNNGG | 1 cut(s) | 242 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 107, 150, 286 |
| BseRI | GAGGAG | 1 cut(s) | 169 |
| BshTI | ACCGGT | 1 cut(s) | 283 |
| BsiSI | CCGG | 2 cut(s) | 257, 284 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 107, 150, 286 |
| Bsp143I | GATC | 2 cut(s) | 69, 321 |
| BspLI | GGNNCC | 1 cut(s) | 139 |
| BspPI | GGATC | 1 cut(s) | 316 |
| BsrFI | RCCGGY | 2 cut(s) | 256, 283 |
| BssAI | RCCGGY | 2 cut(s) | 256, 283 |
| BssECI | CCNNGG | 1 cut(s) | 242 |
| BssMI | GATC | 2 cut(s) | 69, 321 |
| Bst2UI | CCWGG | 2 cut(s) | 17, 296 |
| BstDSI | CCRYGG | 1 cut(s) | 242 |
| BstEII | GGTNACC | 1 cut(s) | 246 |
| BstKTI | GATC | 2 cut(s) | 72, 324 |
| BstMBI | GATC | 2 cut(s) | 69, 321 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 26 |
| BstNI | CCWGG | 2 cut(s) | 17, 296 |
| BstPI | GGTNACC | 1 cut(s) | 246 |
| BstSCI | CCNGG | 2 cut(s) | 15, 294 |
| BstV2I | GAAGAC | 1 cut(s) | 306 |
| BtgI | CCRYGG | 1 cut(s) | 242 |
| BtsI | GCAGTG | 1 cut(s) | 251 |
| BtsIMutI | CAGTG | 2 cut(s) | 65, 251 |
| Cfr10I | RCCGGY | 2 cut(s) | 256, 283 |
| Cfr13I | GGNCC | 1 cut(s) | 292 |
| Csp6I | GTAC | 1 cut(s) | 128 |
| CspAI | ACCGGT | 1 cut(s) | 283 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 224, 259 |
| CviAII | CATG | 2 cut(s) | 163, 167 |
| CviJI | RGCY | 3 cut(s) | 20, 122, 140 |
| CviKI_1 | RGCY | 3 cut(s) | 20, 122, 140 |
| CviQI | GTAC | 1 cut(s) | 128 |
| DpnI | GATC | 2 cut(s) | 71, 323 |
| DpnII | GATC | 2 cut(s) | 69, 321 |
| Eco47I | GGWCC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 1 cut(s) | 144 |
| Eco91I | GGTNACC | 1 cut(s) | 246 |
| EcoO65I | GGTNACC | 1 cut(s) | 246 |
| EcoRII | CCWGG | 2 cut(s) | 15, 294 |
| EcoT22I | ATGCAT | 1 cut(s) | 168 |
| FaeI | CATG | 2 cut(s) | 166, 170 |
| FaiI | YATR | 5 cut(s) | 82, 84, 164, 168, 194 |
| FatI | CATG | 2 cut(s) | 162, 166 |
| FspBI | CTAG | 2 cut(s) | 75, 326 |
| HapII | CCGG | 2 cut(s) | 257, 284 |
| Hin1II | CATG | 2 cut(s) | 166, 170 |
| HinfI | GANTC | 1 cut(s) | 45 |
| HpaII | CCGG | 2 cut(s) | 257, 284 |
| HphI | GGTGA | 3 cut(s) | 227, 268, 344 |
| Hpy188I | TCNGA | 1 cut(s) | 269 |
| Hpy188III | TCNNGA | 1 cut(s) | 116 |
| HpyAV | CCTTC | 3 cut(s) | 127, 301, 323 |
| HpyCH4V | TGCA | 3 cut(s) | 29, 166, 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 26 |
| Hsp92II | CATG | 2 cut(s) | 166, 170 |
| Kzo9I | GATC | 2 cut(s) | 69, 321 |
| LmnI | GCTCC | 1 cut(s) | 137 |
| LpnPI | CCDG | 8 cut(s) | 2, 29, 118, 270, 281, 297, 308, 332 |
| MaeI | CTAG | 2 cut(s) | 75, 326 |
| MaeIII | GTNAC | 3 cut(s) | 180, 246, 314 |
| MalI | GATC | 2 cut(s) | 71, 323 |
| MboI | GATC | 2 cut(s) | 69, 321 |
| MboII | GAAGA | 1 cut(s) | 311 |
| MluCI | AATT | 2 cut(s) | 222, 335 |
| MmeI | TCCRAC | 1 cut(s) | 20 |
| MnlI | CCTC | 4 cut(s) | 59, 112, 147, 151 |
| Mph1103I | ATGCAT | 1 cut(s) | 168 |
| MroXI | GAANNNNTTC | 1 cut(s) | 95 |
| MseI | TTAA | 2 cut(s) | 12, 355 |
| MspI | CCGG | 2 cut(s) | 257, 284 |
| MspR9I | CCNGG | 2 cut(s) | 17, 296 |
| MvaI | CCWGG | 2 cut(s) | 17, 296 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 26 |
| NdeII | GATC | 2 cut(s) | 69, 321 |
| NlaIII | CATG | 2 cut(s) | 166, 170 |
| NlaIV | GGNNCC | 1 cut(s) | 139 |
| NmuCI | GTSAC | 1 cut(s) | 314 |
| NsiI | ATGCAT | 1 cut(s) | 168 |
| PdmI | GAANNNNTTC | 1 cut(s) | 95 |
| PfeI | GAWTC | 1 cut(s) | 45 |
| PfoI | TCCNGGA | 1 cut(s) | 294 |
| PinAI | ACCGGT | 1 cut(s) | 283 |
| Psp6I | CCWGG | 2 cut(s) | 15, 294 |
| PspEI | GGTNACC | 1 cut(s) | 246 |
| PspGI | CCWGG | 2 cut(s) | 15, 294 |
| PspN4I | GGNNCC | 1 cut(s) | 139 |
| PspPI | GGNCC | 1 cut(s) | 292 |
| RsaI | GTAC | 1 cut(s) | 129 |
| RsaNI | GTAC | 1 cut(s) | 128 |
| SaqAI | TTAA | 2 cut(s) | 12, 355 |
| Sau3AI | GATC | 2 cut(s) | 69, 321 |
| Sau96I | GGNCC | 1 cut(s) | 292 |
| ScrFI | CCNGG | 2 cut(s) | 17, 296 |
| SetI | ASST | 7 cut(s) | 40, 124, 193, 217, 312, 321, 334 |
| SinI | GGWCC | 1 cut(s) | 292 |
| Sse9I | AATT | 2 cut(s) | 222, 335 |
| SspMI | CTAG | 2 cut(s) | 75, 326 |
| StyD4I | CCNGG | 2 cut(s) | 15, 294 |
| TasI | AATT | 2 cut(s) | 222, 335 |
| TfiI | GAWTC | 1 cut(s) | 45 |
| Tru1I | TTAA | 2 cut(s) | 12, 355 |
| Tru9I | TTAA | 2 cut(s) | 12, 355 |
| TscAI | CASTG | 2 cut(s) | 72, 258 |
| TseFI | GTSAC | 1 cut(s) | 314 |
| Tsp45I | GTSAC | 1 cut(s) | 314 |
| TspRI | CASTG | 2 cut(s) | 72, 258 |
| VpaK11BI | GGWCC | 1 cut(s) | 292 |
| XapI | RAATTY | 1 cut(s) | 335 |
| XmnI | GAANNNNTTC | 1 cut(s) | 95 |
| XspI | CTAG | 2 cut(s) | 75, 326 |
| Zsp2I | ATGCAT | 1 cut(s) | 168 |