FvH4_1g12330

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
6759583 .. 6765067
5485 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g12330.t1

Sequence Viewer

Length: 1515 bp
ATGGAAATGGTTACAGGGTGTTGGGTTTTGGTGGGATTTTTTCTGGGATCAATATGCTATTACTGGTTTATTAGTAGTTCTAATAAGAGCAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAACTACCAAGATGAATATGTTAAGGGTCGTCCTCAAGTTCCGAAAGGGAGGTTAGGTTGGCCTTTGATAGGAGAAACCCTCGACTTCATTGCTTGTGGCTACACCTCTCGACCTGTCAGCTTCATGGAAAATCGTACATCTCAGTATGGGAAGGTTTTCAAGACACACATTCTGGGAACCCCTATCATAGTGTCTACAGATGCTGAAGTGAACAAGGTGGTGTTGCAAAACCATGGCAACACATTCATTCCTGCTTATCCAAAATCAATCAAAGAACTTCTGGGAAAAAACTCGATTCTCCAAATCAACGGAAGCCTCCACAAACGAGTTCATGGACTCATCGGCGGCTTCCTGAAATCCCCGCAGTTCAAAGCCAGAATCACCAGAGACATTGAGAACTCTGTCAAGCTCAACTTGGCTGGCTGGACAGATCACATGCATCACCCCATTTACATCCAAGACGAAACCCAAAAGATCACATTTGAAGTTCTGGTTAGAGTATTAATGAGCATTGGTCCTGGTGAAGAGTTGAATGTTCTCAAGAGAGAATTTGAAGAGTTCATCAAAGGCTTGATCTGCTTACCTATCAAGCTCCCTGGAACTAGGCTCTACAAATCTCTCAAGGCTAGGGAGAGATTGTTGAAGATGGTAGGGAAAATAGTAGAGGAGAAGAGAAAGGCGATGGAAAAGAGTAGTACCATACCAGTCTGTGTCGACGCAATGGACGCTCTGTTACGGGATAGCTGCGACTCGGACGACGCACAACGGCTGCCGTTGGATTACGTCACCGGGAACATAATAGAGATGATGATTCCGGGAGAGGAGACGGTGCCGATGGCCATGACCCTCGCCGTCAAGTTCCTCAGTGACAGCCCCCTCGCTCTGGACAAGTTAAGGGAGGAGAACATGGAATTGAAGAAGCAGAAGAATGATTCCTCGGAGAACTATTCATGGACTGATTACATGTCCTTGCCATTTACTCAAAATGTGATAAGCGAGACTCTTAGAATGGCAAATATTATCAATGCTATTTGGAGAAAAGCTCTCCGAGATGTTGAAATCAAAGGGTATTTGATTCCAAAAGGATGGTGTGTTTTGGCGTCTTTCAGTTCTGTCCACATGGATGAAGAGAACTATGAACACCCATATCAGTTTGATCCATGGAGATGGGAGAAGGGAGAAGCTGCCTTAAACTATAGTACTAGTTTTACACCATTTGGTGGTGGACAGAGACTGTGTCCTGGTTTGGAACTATCTCGTCTCGAATTATCAATCTTCCTTCATCATCTTGTCACCAGTTATAAATGGGTAGCTGAGAAAGATGACATTGTCCACTTTCCGACGGTCAAAATGAAGAGGAAGCTGCCTATTTCAATCACATCCACAAGCACTTAA

Protein Analysis

505

Amino Acids

57.61

Weight (kDa)

8.4

Isoelectric Point (pI)

39.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 54 - 483 1.9e-56 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013506)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36380 AT4G36380
fragaria_vesca FvH4_1g12330
malus_domestica MD02G1137700.v1.1 MD15G1251500.v1.1
prunus_persica Prupe.7G162900_v2.0.a1
pyrus_communis pycom02g10900 pycom15g22160
rosa_chinensis RchiOBHm_Chr2g0100151
rosa_laevigata RLG00000016941
rosa_multiflora Rmu_sc0018554.1_g000005
rosa_roxburghii Rroxscaffold_2G00142520
rosa_rugosa Rorug02G0086100
rosa_samantha Rh2AG135100 Rh2BG138500 Rh2CG140300 Rh2DG140500
rosa_wichuraiana Rw2G010540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1422
AccB1I GGYRCC 1 cut(s) 949
AccB7I CCANNNNNTGG 1 cut(s) 1340
AccI GTMKAC 2 cut(s) 314, 834
AciI CCGC 2 cut(s) 465, 482
AclWI GGATC 2 cut(s) 55, 1271
AcoI YGGCCR 1 cut(s) 957
AcsI RAATTY 1 cut(s) 668
AcuI CTGAAG 1 cut(s) 345
AcyI GRCGYC 1 cut(s) 1220
AfaI GTAC 3 cut(s) 256, 817, 1321
AfiI CCNNNNNNNGG 3 cut(s) 188, 1003, 1340
AflIII ACRYGT 1 cut(s) 1083
AgsI TTSAA 9 cut(s) 280, 490, 605, 652, 674, 763, 1036, 1178, 1494
AhlI ACTAGT 1 cut(s) 1322
AjnI CCWGG 3 cut(s) 637, 715, 1360
AluBI AGCT 8 cut(s) 240, 529, 712, 864, 1163, 1304, 1433, 1483
AluI AGCT 8 cut(s) 240, 529, 712, 864, 1163, 1304, 1433, 1483
Alw26I GTCTC 5 cut(s) 501, 938, 1112, 1345, 1385
AlwI GGATC 2 cut(s) 55, 1271
AlwNI CAGNNNCTG 2 cut(s) 323, 1354
AoxI GGCC 2 cut(s) 179, 957
ApeKI GCWGC 4 cut(s) 864, 889, 1304, 1483
ApoI RAATTY 1 cut(s) 668
AseI ATTAAT 1 cut(s) 623
Asp700I GAANNNNTTC 1 cut(s) 275
AspS9I GGNCC 1 cut(s) 635
AsuC2I CCSGG 2 cut(s) 910, 936
AsuHPI GGTGA 5 cut(s) 493, 554, 653, 898, 1405
AvaII GGWCC 1 cut(s) 635
BalI TGGCCA 1 cut(s) 959
BanI GGYRCC 1 cut(s) 949
BarI GAAGNNNNNNTAC 2 cut(s) 107, 139
BbvI GCAGC 4 cut(s) 851, 876, 1291, 1470
BccI CCATC 5 cut(s) 760, 796, 949, 1200, 1281
BceAI ACGGC 3 cut(s) 877, 902, 956
BcgI CGANNNNNNTGC 2 cut(s) 191, 225
BciT130I CCWGG 3 cut(s) 639, 717, 1362
BcnI CCSGG 2 cut(s) 910, 936
BcoDI GTCTC 5 cut(s) 501, 938, 1112, 1345, 1385
BcuI ACTAGT 1 cut(s) 1322
BfaI CTAG 3 cut(s) 723, 747, 1323
BfmI CTRYAG 2 cut(s) 315, 1315
BisI GCNGC 5 cut(s) 466, 865, 890, 1305, 1484
BlsI GCNGC 5 cut(s) 467, 866, 891, 1306, 1485
BmcAI AGTACT 1 cut(s) 1321
Bme1390I CCNGG 5 cut(s) 639, 717, 910, 936, 1362
Bme18I GGWCC 1 cut(s) 635
BmgT120I GGNCC 1 cut(s) 635
BmiI GGNNCC 2 cut(s) 298, 951
BmrFI CCNGG 5 cut(s) 639, 717, 910, 936, 1362
BmsI GCATC 2 cut(s) 310, 568
BplI GAGNNNNNCTC 4 cut(s) 183, 215, 1147, 1179
BpuEI CTTGAG 3 cut(s) 138, 644, 725
BpuMI CCSGG 2 cut(s) 910, 936
BsaHI GRCGYC 1 cut(s) 1220
BsaJI CCNNGG 4 cut(s) 352, 715, 1056, 1280
BsaXI ACNNNNNCTCC 4 cut(s) 160, 190, 743, 773
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 1003, 1340
Bse1I ACTGG 3 cut(s) 68, 824, 1416
Bse3DI GCAATG 2 cut(s) 207, 846
BseBI CCWGG 3 cut(s) 639, 717, 1362
BseDI CCNNGG 4 cut(s) 352, 715, 1056, 1280
BseGI GGATG 4 cut(s) 573, 1211, 1249, 1499
BseLI CCNNNNNNNGG 3 cut(s) 188, 1003, 1340
BseMI GCAATG 2 cut(s) 207, 846
BseMII CTCAG 3 cut(s) 275, 997, 1425
BseNI ACTGG 3 cut(s) 68, 824, 1416
BseRI GAGGAG 3 cut(s) 800, 956, 1034
BseXI GCAGC 4 cut(s) 851, 876, 1291, 1470
BshFI GGCC 2 cut(s) 181, 959
BshNI GGYRCC 1 cut(s) 949
BsiSI CCGG 2 cut(s) 909, 935
BslI CCNNNNNNNGG 3 cut(s) 188, 1003, 1340
BsmAI GTCTC 5 cut(s) 501, 938, 1112, 1345, 1385
BsmBI CGTCTC 2 cut(s) 938, 1385
BsnI GGCC 2 cut(s) 181, 959
Bsp143I GATC 5 cut(s) 47, 550, 594, 693, 1276
Bsp19I CCATGG 2 cut(s) 352, 1280
BspACI CCGC 2 cut(s) 465, 482
BspANI GGCC 2 cut(s) 181, 959
BspCNI CTCAG 3 cut(s) 274, 996, 1426
BspLI GGNNCC 2 cut(s) 298, 951
BspPI GGATC 2 cut(s) 55, 1271
BspT107I GGYRCC 1 cut(s) 949
BsrDI GCAATG 2 cut(s) 207, 846
BsrI ACTGG 3 cut(s) 68, 824, 1416
BssECI CCNNGG 4 cut(s) 352, 715, 1056, 1280
BssMI GATC 5 cut(s) 47, 550, 594, 693, 1276
BssNI GRCGYC 1 cut(s) 1220
BssT1I CCWWGG 2 cut(s) 352, 1280
Bst2UI CCWGG 3 cut(s) 639, 717, 1362
Bst4CI ACNGT 3 cut(s) 949, 1356, 1465
Bst6I CTCTTC 5 cut(s) 639, 669, 785, 1242, 1469
BstACI GRCGYC 1 cut(s) 1220
BstC8I GCNNGC 1 cut(s) 541
BstDEI CTNAG 4 cut(s) 261, 983, 1124, 1434
BstDSI CCRYGG 2 cut(s) 352, 1280
BstENI CCTNNNNNAGG 1 cut(s) 186
BstF5I GGATG 4 cut(s) 573, 1211, 1249, 1499
BstKTI GATC 5 cut(s) 50, 553, 597, 696, 1279
BstMAI GTCTC 5 cut(s) 501, 938, 1112, 1345, 1385
BstMBI GATC 5 cut(s) 47, 550, 594, 693, 1276
BstMWI GCNNNNNNNGC 2 cut(s) 696, 845
BstNI CCWGG 3 cut(s) 639, 717, 1362
BstNSI RCATGY 2 cut(s) 559, 1087
BstSCI CCNGG 5 cut(s) 637, 715, 908, 934, 1360
BstSFI CTRYAG 2 cut(s) 315, 1315
BstV1I GCAGC 4 cut(s) 851, 876, 1291, 1470
BstXI CCANNNNNNTGG 2 cut(s) 1206, 1287
BsuRI GGCC 2 cut(s) 181, 959
BtgI CCRYGG 2 cut(s) 352, 1280
BtgZI GCGATG 1 cut(s) 815
BtsCI GGATG 4 cut(s) 573, 1211, 1249, 1499
BtsIMutI CAGTG 1 cut(s) 991
Cac8I GCNNGC 1 cut(s) 541
CaiI CAGNNNCTG 2 cut(s) 323, 1354
Cfr13I GGNCC 1 cut(s) 635
CseI GACGC 4 cut(s) 845, 854, 887, 1209
Csp6I GTAC 3 cut(s) 255, 816, 1320
CviQI GTAC 3 cut(s) 255, 816, 1320
DdeI CTNAG 4 cut(s) 261, 983, 1124, 1434
DpnI GATC 5 cut(s) 49, 552, 596, 695, 1278
DpnII GATC 5 cut(s) 47, 550, 594, 693, 1276
EaeI YGGCCR 1 cut(s) 957
Eam1104I CTCTTC 5 cut(s) 639, 669, 785, 1242, 1469
EarI CTCTTC 5 cut(s) 639, 669, 785, 1242, 1469
Eco130I CCWWGG 2 cut(s) 352, 1280
Eco47I GGWCC 1 cut(s) 635
Eco57I CTGAAG 1 cut(s) 345
EcoNI CCTNNNNNAGG 1 cut(s) 186
EcoRII CCWGG 3 cut(s) 637, 715, 1360
EcoT14I CCWWGG 2 cut(s) 352, 1280
EcoT22I ATGCAT 1 cut(s) 561
ErhI CCWWGG 2 cut(s) 352, 1280
Esp3I CGTCTC 2 cut(s) 938, 1385
FalI AAGNNNNNCTT 2 cut(s) 518, 550
FauI CCCGC 1 cut(s) 489
FblI GTMKAC 2 cut(s) 314, 834
Fnu4HI GCNGC 5 cut(s) 466, 865, 890, 1305, 1484
FokI GGATG 4 cut(s) 560, 1218, 1256, 1486
Fsp4HI GCNGC 5 cut(s) 466, 865, 890, 1305, 1484
FspBI CTAG 3 cut(s) 723, 747, 1323
GluI GCNGC 5 cut(s) 466, 865, 890, 1305, 1484
HaeIII GGCC 2 cut(s) 181, 959
HapII CCGG 2 cut(s) 909, 935
HgaI GACGC 4 cut(s) 845, 854, 887, 1209
Hin1I GRCGYC 1 cut(s) 1220
HincII GTYRAC 1 cut(s) 835
HindII GTYRAC 1 cut(s) 835
HinfI GANTC 8 cut(s) 415, 456, 498, 869, 931, 1052, 1120, 1195
HpaII CCGG 2 cut(s) 909, 935
HphI GGTGA 5 cut(s) 493, 554, 653, 898, 1405
Hpy166II GTNNAC 6 cut(s) 315, 331, 835, 1237, 1346, 1453
Hpy188I TCNGA 5 cut(s) 162, 874, 1060, 1169, 1461
Hpy188III TCNNGA 6 cut(s) 228, 280, 472, 661, 1004, 1382
Hpy8I GTNNAC 6 cut(s) 315, 331, 835, 1237, 1346, 1453
Hpy99I CGWCG 3 cut(s) 839, 881, 1465
HpyAV CCTTC 7 cut(s) 91, 97, 103, 109, 265, 1288, 1409
HpyCH4III ACNGT 3 cut(s) 949, 1356, 1465
HpyCH4IV ACGT 1 cut(s) 903
HpyCH4V TGCA 2 cut(s) 346, 559
HpyF10VI GCNNNNNNNGC 2 cut(s) 696, 845
HpyF3I CTNAG 4 cut(s) 261, 983, 1124, 1434
HpySE526I ACGT 1 cut(s) 903
Hsp92I GRCGYC 1 cut(s) 1220
Kzo9I GATC 5 cut(s) 47, 550, 594, 693, 1276
LmnI GCTCC 1 cut(s) 717
Lsp1109I GCAGC 4 cut(s) 851, 876, 1291, 1470
LweI GCATC 2 cut(s) 310, 568
MaeI CTAG 3 cut(s) 723, 747, 1323
MaeII ACGT 1 cut(s) 903
MaeIII GTNAC 5 cut(s) 10, 852, 904, 986, 1411
MalI GATC 5 cut(s) 49, 552, 596, 695, 1278
MboI GATC 5 cut(s) 47, 550, 594, 693, 1276
MboII GAAGA 9 cut(s) 656, 686, 775, 802, 1048, 1057, 1259, 1387, 1486
MlsI TGGCCA 1 cut(s) 959
MluCI AATT 3 cut(s) 668, 1031, 1385
MluNI TGGCCA 1 cut(s) 959
MlyI GAGTC 3 cut(s) 450, 863, 1114
MmeI TCCRAC 2 cut(s) 876, 1484
Mox20I TGGCCA 1 cut(s) 959
Mph1103I ATGCAT 1 cut(s) 561
MroXI GAANNNNTTC 1 cut(s) 275
MscI TGGCCA 1 cut(s) 959
MseI TTAA 5 cut(s) 141, 623, 1013, 1310, 1513
MslI CAYNNNNRTG 2 cut(s) 1242, 1285
Msp20I TGGCCA 1 cut(s) 959
MspI CCGG 2 cut(s) 909, 935
MspR9I CCNGG 5 cut(s) 639, 717, 910, 936, 1362
MvaI CCWGG 3 cut(s) 639, 717, 1362
MwoI GCNNNNNNNGC 2 cut(s) 696, 845
NciI CCSGG 2 cut(s) 910, 936
NcoI CCATGG 2 cut(s) 352, 1280
NdeII GATC 5 cut(s) 47, 550, 594, 693, 1276
NlaIV GGNNCC 2 cut(s) 298, 951
NmuCI GTSAC 3 cut(s) 904, 986, 1411
NsiI ATGCAT 1 cut(s) 561
NspI RCATGY 2 cut(s) 559, 1087
PciI ACATGT 1 cut(s) 1083
PdmI GAANNNNTTC 1 cut(s) 275
PfeI GAWTC 5 cut(s) 415, 498, 931, 1052, 1195
PflFI GACNNNGTC 2 cut(s) 1356, 1448
PflMI CCANNNNNTGG 1 cut(s) 1340
PfoI TCCNGGA 1 cut(s) 934
PkrI GCNGC 5 cut(s) 467, 866, 891, 1306, 1485
PleI GAGTC 3 cut(s) 450, 863, 1114
PpsI GAGTC 3 cut(s) 450, 863, 1114
PscI ACATGT 1 cut(s) 1083
PshBI ATTAAT 1 cut(s) 623
PsiI TTATAA 1 cut(s) 1422
Psp6I CCWGG 3 cut(s) 637, 715, 1360
PspGI CCWGG 3 cut(s) 637, 715, 1360
PspN4I GGNNCC 2 cut(s) 298, 951
PspPI GGNCC 1 cut(s) 635
PstNI CAGNNNCTG 2 cut(s) 323, 1354
PsyI GACNNNGTC 2 cut(s) 1356, 1448
RsaI GTAC 3 cut(s) 256, 817, 1321
RsaNI GTAC 3 cut(s) 255, 816, 1320
RseI CAYNNNNRTG 2 cut(s) 1242, 1285
SalI GTCGAC 1 cut(s) 833
SaqAI TTAA 5 cut(s) 141, 623, 1013, 1310, 1513
SatI GCNGC 5 cut(s) 466, 865, 890, 1305, 1484
Sau3AI GATC 5 cut(s) 47, 550, 594, 693, 1276
Sau96I GGNCC 1 cut(s) 635
ScaI AGTACT 1 cut(s) 1321
SchI GAGTC 3 cut(s) 450, 863, 1114
ScrFI CCNGG 5 cut(s) 639, 717, 910, 936, 1362
SfaNI GCATC 2 cut(s) 310, 568
SfcI CTRYAG 2 cut(s) 315, 1315
SinI GGWCC 1 cut(s) 635
SmiMI CAYNNNNRTG 2 cut(s) 1242, 1285
SmlI CTYRAG 3 cut(s) 153, 659, 740
SmoI CTYRAG 3 cut(s) 153, 659, 740
SpeI ACTAGT 1 cut(s) 1322
Sse9I AATT 3 cut(s) 668, 1031, 1385
SsiI CCGC 2 cut(s) 465, 482
SspI AATATT 1 cut(s) 1138
SspMI CTAG 3 cut(s) 723, 747, 1323
StyD4I CCNGG 5 cut(s) 637, 715, 908, 934, 1360
StyI CCWWGG 2 cut(s) 352, 1280
TaaI ACNGT 3 cut(s) 949, 1356, 1465
TaiI ACGT 1 cut(s) 906
TaqI TCGA 5 cut(s) 201, 229, 413, 834, 1383
TasI AATT 3 cut(s) 668, 1031, 1385
TatI WGTACW 1 cut(s) 1319
TauI GCSGC 1 cut(s) 468
TfiI GAWTC 5 cut(s) 415, 498, 931, 1052, 1195
Tru1I TTAA 5 cut(s) 141, 623, 1013, 1310, 1513
Tru9I TTAA 5 cut(s) 141, 623, 1013, 1310, 1513
TscAI CASTG 1 cut(s) 991
TseFI GTSAC 3 cut(s) 904, 986, 1411
TseI GCWGC 4 cut(s) 864, 889, 1304, 1483
Tsp45I GTSAC 3 cut(s) 904, 986, 1411
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 1 cut(s) 991
Tth111I GACNNNGTC 2 cut(s) 1356, 1448
Van91I CCANNNNNTGG 1 cut(s) 1340
VpaK11BI GGWCC 1 cut(s) 635
VspI ATTAAT 1 cut(s) 623
XagI CCTNNNNNAGG 1 cut(s) 186
XapI RAATTY 1 cut(s) 668
XceI RCATGY 2 cut(s) 559, 1087
XmiI GTMKAC 2 cut(s) 314, 834
XmnI GAANNNNTTC 1 cut(s) 275
XspI CTAG 3 cut(s) 723, 747, 1323
ZrmI AGTACT 1 cut(s) 1321
Zsp2I ATGCAT 1 cut(s) 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.