Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0013506

Physical Location & Seq

Genomic Coordinates Forward (+)

16806841 .. 16812054

Gene Structure 5214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G162900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGAGGATGGAATGGATTGTGGGATGTTGGGTTTTGGTGGGAATTTTTGTAGGATCGTTGTGTTGGGTTTCGAAGGAGATGAAGAAGAAGAGCAAAAGCCAAAATCATAAGGGTGCTAAAGTCCCCAAAGGGAATTTAGGTTGGCCCTTGATAGGAGAAACTCTTGACTTCATTGCTTGCGGCTACACCTCTCGACCTGTCAGCTTCATGGAAAAACGCAGATCTCTGTATGGAAAGGTCTTCAAGACGAACATATTGGGAACTCCAATCATAGTGTCCACTGATGCTGAAGTGAACAAGGTGGTGTTAAAAAACCATGGAAATACCTTCATCCCTGCTTATCCAAAATCTGTCAAAGAACTGCTGGGAAAATTTTCGATTCTGCAAATAAATGGAAGCATTCATAAGAGAGTGCATGGGCTTATCGGTGGCTTCCTCAAATCACCACAGTTCAAAGATCGAATCACTAGAGACATTGAAAACTCTGTCAAGCTCAACTTGGCTCGTTGGAGACACATGCAATCTCCCATTTACGTTCAAGATGAAACCCAAAAGATAACATTTGAAATTCTAGTTAAAGTACTAATGAGCGTCGGTCCTGGAGAAGATTTGAACTTTCTCAAGAGAGAATTTGAAGAATTCATCAAAGGTTTAATTTGCATACCAATTAAGCTACCTGGTACTAGACTCTACAAATCTCTCAAGGCTAGGGAGCGATTGTTGAAGATGGTGGGAAAAATAGTGGAGCAGAAGAAAAAGGCCATGGAAAATAATAGTATCCAAGAAACAAGTCCAGTCAATGACGCAATGGATGTGCTGTTGCGTGATGGCGGTGACCAAAGCAACGAGACGCAACGCCTGCCGTTGGATTTCATCACGGGGAATATCATAGAGATGATGATCCCAGGAGAGGAGACTGTGCCTGTGGCCATGACCCTAGCCGTCAAGTTCCTCAGTGACAGCCCTGTGGCGTTAGACAAACTAAGGGATGAGAACATGGAATTGAAGAGGCAGAAGGTTGGTTCCTCTGAAAATTATGCATGGACTGATTACCTGTCCTTGCCATTTACTCAAAATGTGATAAGTGAGACTCTTAGAATGGCAAATATTATCAATGCTATTTGGAGAAAAGCTCTTAAAGATGTTGAAATCAAAGGGTATTTGATACCACAAGGATGGTGTGTCTTGGCATCTTTAACTTCTGTTCACATGGATGAAGAGAACTATGAAAACCCATATCAGTTTGATCCATGGAGATGGGAGAAGTTAGAAGCTGCTGTAAACTACACTTCTAGTTTCACTCCATTTGGTGGGGGACAGAGGCTCTGCCCTGGTTTGGAACTCTCTAGGCTTGAATTATCAATCTTCCTTCATCATCTTGTCACTAATTACAGATGGGTAGCTGAGAAGGATGAAATTGTTCACTTTCCAACGGTCAAGATGAAGAGGAAGCTGCCCATTTCTGTCACATCCACAAGCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0003006 GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009653 GO:0009791 GO:0009826 GO:0009908 GO:0009965 GO:0009987 GO:0010016 GO:0010268 GO:0010817 GO:0016043 GO:0016049 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0016705 GO:0016709 GO:0022414 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0042445 GO:0042446 GO:0042592 GO:0042814 GO:0044238 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048441 GO:0048443 GO:0048465 GO:0048466 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0048878 GO:0055088 GO:0055114 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

495

Amino Acids

56.27

Weight (kDa)

9.28

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36380 AT4G36380
fragaria_vesca	FvH4_1g12330
malus_domestica	MD02G1137700.v1.1 MD15G1251500.v1.1
prunus_persica	Prupe.7G162900_v2.0.a1
pyrus_communis	pycom02g10900 pycom15g22160
rosa_chinensis	RchiOBHm_Chr2g0100151
rosa_laevigata	RLG00000016941
rosa_multiflora	Rmu_sc0018554.1_g000005
rosa_roxburghii	Rroxscaffold_2G00142520
rosa_rugosa	Rorug02G0086100
rosa_samantha	Rh2AG135100 Rh2BG138500 Rh2CG140300 Rh2DG140500
rosa_wichuraiana	Rw2G010540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1310
AciI	CCGC	2 cut(s)	180, 831
AclWI	GGATC	3 cut(s)	61, 895, 1241
AcoI	YGGCCR	1 cut(s)	927
AcsI	RAATTY	6 cut(s)	42, 133, 371, 567, 629, 638
AcuI	CTGAAG	1 cut(s)	309
AfaI	GTAC	2 cut(s)	582, 682
AfiI	CCNNNNNNNGG	5 cut(s)	152, 865, 910, 1310, 1336
AjnI	CCWGG	4 cut(s)	598, 676, 904, 1330
AluBI	AGCT	7 cut(s)	204, 493, 673, 1133, 1274, 1403, 1453
AluI	AGCT	7 cut(s)	204, 493, 673, 1133, 1274, 1403, 1453
Alw26I	GTCTC	5 cut(s)	465, 505, 842, 908, 1082
AlwI	GGATC	3 cut(s)	61, 895, 1241
AoxI	GGCC	3 cut(s)	143, 759, 927
ApeKI	GCWGC	2 cut(s)	1274, 1453
ApoI	RAATTY	6 cut(s)	42, 133, 371, 567, 629, 638
Asp700I	GAANNNNTTC	2 cut(s)	373, 1419
AspS9I	GGNCC	2 cut(s)	144, 596
AsuHPI	GGTGA	2 cut(s)	435, 845
AsuII	TTCGAA	1 cut(s)	71
AvaII	GGWCC	1 cut(s)	596
BalI	TGGCCA	1 cut(s)	929
BbsI	GAAGAC	1 cut(s)	232
BbvI	GCAGC	2 cut(s)	1261, 1440
BccI	CCATC	5 cut(s)	721, 821, 1170, 1251, 1389
BceAI	ACGGC	2 cut(s)	847, 926
BciT130I	CCWGG	4 cut(s)	600, 678, 906, 1332
BciVI	GTATCC	1 cut(s)	788
BcoDI	GTCTC	5 cut(s)	465, 505, 842, 908, 1082
BfaI	CTAG	7 cut(s)	468, 572, 684, 708, 938, 1293, 1347
BfuI	GTATCC	1 cut(s)	788
BglII	AGATCT	1 cut(s)	221
BisI	GCNGC	3 cut(s)	181, 1275, 1454
BlsI	GCNGC	3 cut(s)	182, 1276, 1455
BmcAI	AGTACT	1 cut(s)	582
Bme1390I	CCNGG	4 cut(s)	600, 678, 906, 1332
Bme18I	GGWCC	1 cut(s)	596
BmgT120I	GGNCC	2 cut(s)	144, 596
BmiI	GGNNCC	1 cut(s)	1024
BmrFI	CCNGG	4 cut(s)	600, 678, 906, 1332
BmsI	GCATC	2 cut(s)	274, 1199
BpiI	GAAGAC	1 cut(s)	232
BplI	GAGNNNNNCTC	2 cut(s)	1117, 1149
BpmI	CTGGAG	1 cut(s)	621
Bpu14I	TTCGAA	1 cut(s)	71
BpuEI	CTTGAG	2 cut(s)	605, 686
BsaBI	GATNNNNATC	1 cut(s)	899
BsaJI	CCNNGG	5 cut(s)	316, 762, 904, 1250, 1330
BsaXI	ACNNNNNCTCC	2 cut(s)	704, 734
Bsc4I	CCNNNNNNNGG	5 cut(s)	152, 865, 910, 1310, 1336
Bse1I	ACTGG	1 cut(s)	794
Bse3DI	GCAATG	2 cut(s)	171, 813
Bse8I	GATNNNNATC	1 cut(s)	899
BseBI	CCWGG	4 cut(s)	600, 678, 906, 1332
BseDI	CCNNGG	5 cut(s)	316, 762, 904, 1250, 1330
BseGI	GGATG	9 cut(s)	12, 29, 330, 817, 994, 1181, 1219, 1417, 1469
BseJI	GATNNNNATC	1 cut(s)	899
BseLI	CCNNNNNNNGG	5 cut(s)	152, 865, 910, 1310, 1336
BseMI	GCAATG	2 cut(s)	171, 813
BseMII	CTCAG	2 cut(s)	967, 1395
BseNI	ACTGG	1 cut(s)	794
BseRI	GAGGAG	1 cut(s)	926
BseXI	GCAGC	2 cut(s)	1261, 1440
BseYI	CCCAGC	1 cut(s)	364
BshFI	GGCC	3 cut(s)	145, 761, 929
BslFI	GGGAC	2 cut(s)	107, 1329
BslI	CCNNNNNNNGG	5 cut(s)	152, 865, 910, 1310, 1336
BsmAI	GTCTC	5 cut(s)	465, 505, 842, 908, 1082
BsmBI	CGTCTC	1 cut(s)	842
BsmFI	GGGAC	2 cut(s)	107, 1329
BsmI	GAATGC	1 cut(s)	399
BsnI	GGCC	3 cut(s)	145, 761, 929
Bsp119I	TTCGAA	1 cut(s)	71
Bsp143I	GATC	5 cut(s)	53, 221, 457, 900, 1246
Bsp19I	CCATGG	3 cut(s)	316, 762, 1250
BspACI	CCGC	2 cut(s)	180, 831
BspANI	GGCC	3 cut(s)	145, 761, 929
BspCNI	CTCAG	2 cut(s)	966, 1396
BspLI	GGNNCC	1 cut(s)	1024
BspPI	GGATC	3 cut(s)	61, 895, 1241
BspQI	GCTCTTC	1 cut(s)	83
BspT104I	TTCGAA	1 cut(s)	71
BsrDI	GCAATG	2 cut(s)	171, 813
BsrI	ACTGG	1 cut(s)	794
BssECI	CCNNGG	5 cut(s)	316, 762, 904, 1250, 1330
BssMI	GATC	5 cut(s)	53, 221, 457, 900, 1246
BssT1I	CCWWGG	3 cut(s)	316, 762, 1250
Bst2UI	CCWGG	4 cut(s)	600, 678, 906, 1332
Bst4CI	ACNGT	3 cut(s)	450, 919, 1435
Bst6I	CTCTTC	4 cut(s)	83, 1001, 1212, 1439
BstAPI	GCANNNNNTGC	1 cut(s)	859
BstBI	TTCGAA	1 cut(s)	71
BstC8I	GCNNGC	2 cut(s)	178, 860
BstDEI	CTNAG	5 cut(s)	953, 983, 1094, 1404, 1482
BstDSI	CCRYGG	3 cut(s)	316, 762, 1250
BstEII	GGTNACC	1 cut(s)	833
BstF5I	GGATG	9 cut(s)	12, 29, 330, 817, 994, 1181, 1219, 1417, 1469
BstKTI	GATC	5 cut(s)	56, 224, 460, 903, 1249
BstMAI	GTCTC	5 cut(s)	465, 505, 842, 908, 1082
BstMBI	GATC	5 cut(s)	53, 221, 457, 900, 1246
BstMWI	GCNNNNNNNGC	1 cut(s)	859
BstNI	CCWGG	4 cut(s)	600, 678, 906, 1332
BstNSI	RCATGY	1 cut(s)	520
BstPI	GGTNACC	1 cut(s)	833
BstSCI	CCNGG	4 cut(s)	598, 676, 904, 1330
BstV1I	GCAGC	2 cut(s)	1261, 1440
BstV2I	GAAGAC	1 cut(s)	232
BstX2I	RGATCY	1 cut(s)	221
BstXI	CCANNNNNNTGG	2 cut(s)	1176, 1257
BstYI	RGATCY	1 cut(s)	221
BsuI	GTATCC	1 cut(s)	788
BsuRI	GGCC	3 cut(s)	145, 761, 929
BtgI	CCRYGG	3 cut(s)	316, 762, 1250
BtsCI	GGATG	9 cut(s)	12, 29, 330, 817, 994, 1181, 1219, 1417, 1469
BtsIMutI	CAGTG	2 cut(s)	279, 961
Cac8I	GCNNGC	2 cut(s)	178, 860
Cfr13I	GGNCC	2 cut(s)	144, 596
CseI	GACGC	3 cut(s)	580, 812, 859
CsiI	ACCWGGT	1 cut(s)	676
Csp6I	GTAC	2 cut(s)	581, 681
CviQI	GTAC	2 cut(s)	581, 681
DdeI	CTNAG	5 cut(s)	953, 983, 1094, 1404, 1482
DpnI	GATC	5 cut(s)	55, 223, 459, 902, 1248
DpnII	GATC	5 cut(s)	53, 221, 457, 900, 1246
EaeI	YGGCCR	1 cut(s)	927
Eam1104I	CTCTTC	4 cut(s)	83, 1001, 1212, 1439
EarI	CTCTTC	4 cut(s)	83, 1001, 1212, 1439
Eco130I	CCWWGG	3 cut(s)	316, 762, 1250
Eco47I	GGWCC	1 cut(s)	596
Eco57I	CTGAAG	1 cut(s)	309
Eco91I	GGTNACC	1 cut(s)	833
EcoO65I	GGTNACC	1 cut(s)	833
EcoRI	GAATTC	1 cut(s)	638
EcoRII	CCWGG	4 cut(s)	598, 676, 904, 1330
EcoT14I	CCWWGG	3 cut(s)	316, 762, 1250
EcoT22I	ATGCAT	1 cut(s)	1042
ErhI	CCWWGG	3 cut(s)	316, 762, 1250
Esp3I	CGTCTC	1 cut(s)	842
FalI	AAGNNNNNCTT	2 cut(s)	482, 514
FaqI	GGGAC	2 cut(s)	107, 1329
Fnu4HI	GCNGC	3 cut(s)	181, 1275, 1454
FokI	GGATG	9 cut(s)	19, 36, 317, 824, 1001, 1188, 1226, 1424, 1456
Fsp4HI	GCNGC	3 cut(s)	181, 1275, 1454
FspBI	CTAG	7 cut(s)	468, 572, 684, 708, 938, 1293, 1347
GluI	GCNGC	3 cut(s)	181, 1275, 1454
GsaI	CCCAGC	1 cut(s)	368
GsuI	CTGGAG	1 cut(s)	621
HaeIII	GGCC	3 cut(s)	145, 761, 929
HgaI	GACGC	3 cut(s)	580, 812, 859
HinfI	GANTC	4 cut(s)	379, 462, 687, 1090
HphI	GGTGA	2 cut(s)	435, 845
Hpy166II	GTNNAC	5 cut(s)	279, 295, 1207, 1282, 1423
Hpy188I	TCNGA	1 cut(s)	1030
Hpy188III	TCNNGA	6 cut(s)	164, 192, 244, 539, 622, 1438
Hpy8I	GTNNAC	5 cut(s)	279, 295, 1207, 1282, 1423
Hpy99I	CGWCG	1 cut(s)	596
HpyAV	CCTTC	5 cut(s)	67, 337, 1009, 1379, 1402
HpyCH4III	ACNGT	3 cut(s)	450, 919, 1435
HpyCH4IV	ACGT	1 cut(s)	534
HpyCH4V	TGCA	5 cut(s)	385, 415, 520, 660, 1040
HpyF10VI	GCNNNNNNNGC	1 cut(s)	859
HpyF3I	CTNAG	5 cut(s)	953, 983, 1094, 1404, 1482
HpySE526I	ACGT	1 cut(s)	534
Kzo9I	GATC	5 cut(s)	53, 221, 457, 900, 1246
LguI	GCTCTTC	1 cut(s)	83
LmnI	GCTCC	2 cut(s)	712, 745
Lsp1109I	GCAGC	2 cut(s)	1261, 1440
LweI	GCATC	2 cut(s)	274, 1199
MabI	ACCWGGT	1 cut(s)	676
MaeI	CTAG	7 cut(s)	468, 572, 684, 708, 938, 1293, 1347
MaeII	ACGT	1 cut(s)	534
MaeIII	GTNAC	4 cut(s)	833, 956, 1381, 1465
MalI	GATC	5 cut(s)	55, 223, 459, 902, 1248
MboI	GATC	5 cut(s)	53, 221, 457, 900, 1246
MflI	RGATCY	1 cut(s)	221
MlsI	TGGCCA	1 cut(s)	929
MluNI	TGGCCA	1 cut(s)	929
MlyI	GAGTC	2 cut(s)	681, 1084
MmeI	TCCRAC	3 cut(s)	488, 846, 1454
MnlI	CCTC	8 cut(s)	199, 446, 904, 962, 1002, 1036, 1314, 1440
Mox20I	TGGCCA	1 cut(s)	929
Mph1103I	ATGCAT	1 cut(s)	1042
MroXI	GAANNNNTTC	2 cut(s)	373, 1419
MscI	TGGCCA	1 cut(s)	929
MseI	TTAA	6 cut(s)	308, 576, 653, 669, 1137, 1196
MslI	CAYNNNNRTG	5 cut(s)	111, 893, 1174, 1212, 1255
Msp20I	TGGCCA	1 cut(s)	929
MspR9I	CCNGG	4 cut(s)	600, 678, 906, 1332
Mva1269I	GAATGC	1 cut(s)	399
MvaI	CCWGG	4 cut(s)	600, 678, 906, 1332
MwoI	GCNNNNNNNGC	1 cut(s)	859
NcoI	CCATGG	3 cut(s)	316, 762, 1250
NdeII	GATC	5 cut(s)	53, 221, 457, 900, 1246
NlaIV	GGNNCC	1 cut(s)	1024
NmuCI	GTSAC	4 cut(s)	833, 956, 1381, 1465
NsiI	ATGCAT	1 cut(s)	1042
NspI	RCATGY	1 cut(s)	520
NspV	TTCGAA	1 cut(s)	71
PciSI	GCTCTTC	1 cut(s)	83
PctI	GAATGC	1 cut(s)	399
PdmI	GAANNNNTTC	2 cut(s)	373, 1419
PfeI	GAWTC	2 cut(s)	379, 462
PflMI	CCANNNNNTGG	1 cut(s)	1310
PfoI	TCCNGGA	1 cut(s)	598
PkrI	GCNGC	3 cut(s)	182, 1276, 1455
PleI	GAGTC	2 cut(s)	681, 1084
PpsI	GAGTC	2 cut(s)	681, 1084
Psp6I	CCWGG	4 cut(s)	598, 676, 904, 1330
PspEI	GGTNACC	1 cut(s)	833
PspFI	CCCAGC	1 cut(s)	364
PspGI	CCWGG	4 cut(s)	598, 676, 904, 1330
PspN4I	GGNNCC	1 cut(s)	1024
PspPI	GGNCC	2 cut(s)	144, 596
PsuI	RGATCY	1 cut(s)	221
RsaI	GTAC	2 cut(s)	582, 682
RsaNI	GTAC	2 cut(s)	581, 681
RseI	CAYNNNNRTG	5 cut(s)	111, 893, 1174, 1212, 1255
SapI	GCTCTTC	1 cut(s)	83
SaqAI	TTAA	6 cut(s)	308, 576, 653, 669, 1137, 1196
SatI	GCNGC	3 cut(s)	181, 1275, 1454
Sau3AI	GATC	5 cut(s)	53, 221, 457, 900, 1246
Sau96I	GGNCC	2 cut(s)	144, 596
ScaI	AGTACT	1 cut(s)	582
SchI	GAGTC	2 cut(s)	681, 1084
ScrFI	CCNGG	4 cut(s)	600, 678, 906, 1332
SexAI	ACCWGGT	1 cut(s)	676
SfaNI	GCATC	2 cut(s)	274, 1199
SfuI	TTCGAA	1 cut(s)	71
SinI	GGWCC	1 cut(s)	596
SmiMI	CAYNNNNRTG	5 cut(s)	111, 893, 1174, 1212, 1255
SmlI	CTYRAG	2 cut(s)	620, 701
SmoI	CTYRAG	2 cut(s)	620, 701
SsiI	CCGC	2 cut(s)	180, 831
SspI	AATATT	1 cut(s)	1108
SspMI	CTAG	7 cut(s)	468, 572, 684, 708, 938, 1293, 1347
StyD4I	CCNGG	4 cut(s)	598, 676, 904, 1330
StyI	CCWWGG	3 cut(s)	316, 762, 1250
TaaI	ACNGT	3 cut(s)	450, 919, 1435
TaiI	ACGT	1 cut(s)	537
TaqI	TCGA	4 cut(s)	71, 193, 377, 460
TaqII	GACCGA	1 cut(s)	584
TatI	WGTACW	1 cut(s)	580
TauI	GCSGC	1 cut(s)	183
TfiI	GAWTC	2 cut(s)	379, 462
Tru1I	TTAA	6 cut(s)	308, 576, 653, 669, 1137, 1196
Tru9I	TTAA	6 cut(s)	308, 576, 653, 669, 1137, 1196
TscAI	CASTG	2 cut(s)	286, 961
TseFI	GTSAC	4 cut(s)	833, 956, 1381, 1465
TseI	GCWGC	2 cut(s)	1274, 1453
Tsp45I	GTSAC	4 cut(s)	833, 956, 1381, 1465
TspRI	CASTG	2 cut(s)	286, 961
Van91I	CCANNNNNTGG	1 cut(s)	1310
VpaK11BI	GGWCC	1 cut(s)	596
XapI	RAATTY	6 cut(s)	42, 133, 371, 567, 629, 638
XceI	RCATGY	1 cut(s)	520
XmnI	GAANNNNTTC	2 cut(s)	373, 1419
XspI	CTAG	7 cut(s)	468, 572, 684, 708, 938, 1293, 1347
ZrmI	AGTACT	1 cut(s)	582
Zsp2I	ATGCAT	1 cut(s)	1042

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.