Rmu_sc0018554.1_g000005

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018554.1
Physical Location & Seq
Forward (+)
21208 .. 25877
4670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018554.1_g000005.1.cds

Sequence Viewer

Length: 1551 bp
atggttacggggtgttgggttttagtgggaattgttgtgggatcaatatgttattactggtttgttagtagttctaataagagtaaggagaaggaggaggaggaagagaaggagaaccaagatcaaaatgttaaaggtcgtcctcaagttccgaaagggaggttaggttggcctttgataggagaaaccctcgacttcattgcttgtggctacacctctcgacctgtcagcttcatggaaagtcgcacatctcagtatgggaaggtttttaagacacacattctgggaacccctatcatagtgtccacagatgctgaagtgaacaaggtggtattgcaaaaccatggcaacaccttcgttcctgcttatccaaaatcaatcaaagaacttctgggaaaaaactctattctccaaatcaacggaagcctccacaaacgagttcatggactcattggcagcttccttaagtccccacaattcaaagcaagaatcaccagagacattgaaaactctgtcaagctcaacttggctggctggacagatcacatgcatcaccccatttacatccaagacgaaacccaaaagatcacctttgaagttctggttagagtattaatgagcattggtcctggtgaagatttgaactttctcaagagagaatttgaagagttcatcaaaggcttgatctgcttacctatcaagctccctggaactaggctctacaaatctctcaaggctagggagcgactgttgaagatggtagggaaaatagtagaggagaagagaaaggccaaaacccaagagagaggaggaccagtctgtgacgcaatggacgcgctgttaagggacagctgcgactcgaacgacgcgcaacgcctgccgttggattacatcgccgggaacatcatagagatgatgattccgggagaggagacggtgccgatggccatgaccctcgccgtcaagtacctcagtgacagccctgtcgctctagacaagttaagggaggagaacatggaattgaagaagcagaaggttgattcctcggaaaattatttgtggaccgattacatgtccttgccatttactcaaaatgtgataagtgagactcttagaatggcaaatattatcaatgctgtttggagaaaagctcccggagatgttgaaattaaagggtatttgattccaaaaggatggtgtgttttggcgtcttttagttctgtccacatggatgaagagaactacgaacacccatatcagtttaatccatggagatgggagaagggagaagctgccttaaactatggtactagttttacaccatttggtggaggacagagactgtgccctggtttggaactatctcgtctcgaattatcaatcttcctccatcatcttgtcaccagttataaatgggtagctgagaaagatgagattatccactttccgactgtcaagatgaagaggaagctccctatttcaatcacatccacgatcacacaacctgctctagctcatcaaggaaattcagtgcagtatatctcaagctaa

Protein Analysis

516

Amino Acids

58.5

Weight (kDa)

8.41

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013506)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36380 AT4G36380
fragaria_vesca FvH4_1g12330
malus_domestica MD02G1137700.v1.1 MD15G1251500.v1.1
prunus_persica Prupe.7G162900_v2.0.a1
pyrus_communis pycom02g10900 pycom15g22160
rosa_chinensis RchiOBHm_Chr2g0100151
rosa_laevigata RLG00000016941
rosa_multiflora Rmu_sc0018554.1_g000005
rosa_roxburghii Rroxscaffold_2G00142520
rosa_rugosa Rorug02G0086100
rosa_samantha Rh2AG135100 Rh2BG138500 Rh2CG140300 Rh2DG140500
rosa_wichuraiana Rw2G010540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
AasI GACNNNNNNGTC 1 cut(s) 983
Acc36I ACCTGC 1 cut(s) 1513
AccB1I GGYRCC 1 cut(s) 937
AccB7I CCANNNNNTGG 1 cut(s) 1328
AccII CGCG 2 cut(s) 836, 869
AclWI GGATC 1 cut(s) 49
AcoI YGGCCR 1 cut(s) 945
AcsI RAATTY 2 cut(s) 659, 1525
AcuI CTGAAG 1 cut(s) 336
AcyI GRCGYC 1 cut(s) 1208
AfaI GTAC 2 cut(s) 968, 1309
AfiI CCNNNNNNNGG 4 cut(s) 179, 883, 1328, 1354
AflII CTTAAG 1 cut(s) 464
AflIII ACRYGT 1 cut(s) 1071
AgsI TTSAA 9 cut(s) 481, 506, 596, 643, 665, 754, 1024, 1166, 1482
AhlI ACTAGT 1 cut(s) 1310
AjnI CCWGG 3 cut(s) 628, 706, 1348
Alw26I GTCTC 5 cut(s) 492, 926, 1100, 1333, 1373
AlwI GGATC 1 cut(s) 49
AlwNI CAGNNNCTG 2 cut(s) 314, 1342
AoxI GGCC 3 cut(s) 170, 789, 945
ApeKI GCWGC 3 cut(s) 456, 852, 1292
ApoI RAATTY 2 cut(s) 659, 1525
AseI ATTAAT 1 cut(s) 614
AspLEI GCGC 2 cut(s) 838, 871
AspS9I GGNCC 3 cut(s) 626, 812, 1062
AsuC2I CCSGG 3 cut(s) 898, 924, 1155
AsuHPI GGTGA 5 cut(s) 484, 545, 580, 644, 1393
AvaII GGWCC 3 cut(s) 626, 812, 1062
BaeGI GKGCMC 1 cut(s) 1349
BalI TGGCCA 1 cut(s) 947
BanI GGYRCC 1 cut(s) 937
BbvI GCAGC 3 cut(s) 468, 839, 1279
BccI CCATC 5 cut(s) 751, 937, 1188, 1269, 1398
BceAI ACGGC 2 cut(s) 865, 944
BcgI CGANNNNNNTGC 4 cut(s) 182, 216, 337, 371
BciT130I CCWGG 3 cut(s) 630, 708, 1350
BcnI CCSGG 3 cut(s) 898, 924, 1155
BcoDI GTCTC 5 cut(s) 492, 926, 1100, 1333, 1373
BcuI ACTAGT 1 cut(s) 1310
BfaI CTAG 5 cut(s) 714, 738, 992, 1311, 1511
BfrI CTTAAG 1 cut(s) 464
BfuAI ACCTGC 1 cut(s) 1513
BisI GCNGC 3 cut(s) 457, 853, 1293
BlsI GCNGC 3 cut(s) 458, 854, 1294
Bme1390I CCNGG 6 cut(s) 630, 708, 898, 924, 1155, 1350
Bme18I GGWCC 3 cut(s) 626, 812, 1062
BmgT120I GGNCC 3 cut(s) 626, 812, 1062
BmiI GGNNCC 2 cut(s) 289, 939
BmrFI CCNGG 6 cut(s) 630, 708, 898, 924, 1155, 1350
BmsI GCATC 2 cut(s) 301, 559
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 1135, 1167
BpuEI CTTGAG 4 cut(s) 129, 635, 716, 1528
BpuMI CCSGG 3 cut(s) 898, 924, 1155
BsaHI GRCGYC 1 cut(s) 1208
BsaJI CCNNGG 5 cut(s) 343, 706, 1044, 1268, 1348
BsaXI ACNNNNNCTCC 6 cut(s) 151, 181, 734, 764, 801, 831
Bsc4I CCNNNNNNNGG 4 cut(s) 179, 883, 1328, 1354
Bse1I ACTGG 3 cut(s) 62, 815, 1404
Bse3DI GCAATG 2 cut(s) 198, 834
BseBI CCWGG 3 cut(s) 630, 708, 1350
BseDI CCNNGG 5 cut(s) 343, 706, 1044, 1268, 1348
BseGI GGATG 4 cut(s) 564, 1199, 1237, 1487
BseLI CCNNNNNNNGG 4 cut(s) 179, 883, 1328, 1354
BseMI GCAATG 2 cut(s) 198, 834
BseMII CTCAG 3 cut(s) 266, 985, 1413
BseNI ACTGG 3 cut(s) 62, 815, 1404
BseRI GAGGAG 6 cut(s) 110, 113, 791, 822, 944, 1022
BseSI GKGCMC 1 cut(s) 1349
BseXI GCAGC 3 cut(s) 468, 839, 1279
Bsh1236I CGCG 2 cut(s) 836, 869
BshFI GGCC 3 cut(s) 172, 791, 947
BshNI GGYRCC 1 cut(s) 937
BsiSI CCGG 3 cut(s) 897, 923, 1155
BslFI GGGAC 2 cut(s) 454, 860
BslI CCNNNNNNNGG 4 cut(s) 179, 883, 1328, 1354
BsmAI GTCTC 5 cut(s) 492, 926, 1100, 1333, 1373
BsmBI CGTCTC 2 cut(s) 926, 1373
BsmFI GGGAC 2 cut(s) 454, 860
BsnI GGCC 3 cut(s) 172, 791, 947
Bsp1286I GDGCHC 1 cut(s) 1349
Bsp143I GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
Bsp19I CCATGG 2 cut(s) 343, 1268
BspANI GGCC 3 cut(s) 172, 791, 947
BspCNI CTCAG 3 cut(s) 265, 984, 1414
BspFNI CGCG 2 cut(s) 836, 869
BspLI GGNNCC 2 cut(s) 289, 939
BspMI ACCTGC 1 cut(s) 1513
BspPI GGATC 1 cut(s) 49
BspT107I GGYRCC 1 cut(s) 937
BspTI CTTAAG 1 cut(s) 464
BsrDI GCAATG 2 cut(s) 198, 834
BsrI ACTGG 3 cut(s) 62, 815, 1404
BssECI CCNNGG 5 cut(s) 343, 706, 1044, 1268, 1348
BssMI GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
BssNI GRCGYC 1 cut(s) 1208
BssT1I CCWWGG 2 cut(s) 343, 1268
Bst2UI CCWGG 3 cut(s) 630, 708, 1350
Bst4CI ACNGT 4 cut(s) 750, 937, 1344, 1453
Bst6I CTCTTC 5 cut(s) 99, 660, 776, 1230, 1457
BstACI GRCGYC 1 cut(s) 1208
BstAFI CTTAAG 1 cut(s) 464
BstAPI GCANNNNNTGC 1 cut(s) 877
BstC8I GCNNGC 2 cut(s) 532, 878
BstDEI CTNAG 4 cut(s) 252, 971, 1112, 1422
BstDSI CCRYGG 2 cut(s) 343, 1268
BstENI CCTNNNNNAGG 1 cut(s) 177
BstF5I GGATG 4 cut(s) 564, 1199, 1237, 1487
BstFNI CGCG 2 cut(s) 836, 869
BstHHI GCGC 2 cut(s) 838, 871
BstKTI GATC 6 cut(s) 44, 124, 544, 588, 687, 1497
BstMAI GTCTC 5 cut(s) 492, 926, 1100, 1333, 1373
BstMBI GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
BstMWI GCNNNNNNNGC 3 cut(s) 687, 833, 877
BstNI CCWGG 3 cut(s) 630, 708, 1350
BstNSI RCATGY 2 cut(s) 550, 1075
BstSCI CCNGG 6 cut(s) 628, 706, 896, 922, 1153, 1348
BstSLI GKGCMC 1 cut(s) 1349
BstUI CGCG 2 cut(s) 836, 869
BstV1I GCAGC 3 cut(s) 468, 839, 1279
BstXI CCANNNNNNTGG 2 cut(s) 1194, 1275
BsuRI GGCC 3 cut(s) 172, 791, 947
BtgI CCRYGG 2 cut(s) 343, 1268
BtgZI GCGATG 1 cut(s) 877
BtsCI GGATG 4 cut(s) 564, 1199, 1237, 1487
BtsIMutI CAGTG 2 cut(s) 979, 1536
BveI ACCTGC 1 cut(s) 1513
Cac8I GCNNGC 2 cut(s) 532, 878
CaiI CAGNNNCTG 2 cut(s) 314, 1342
CfoI GCGC 2 cut(s) 838, 871
Cfr13I GGNCC 3 cut(s) 626, 812, 1062
CseI GACGC 4 cut(s) 833, 842, 875, 1197
Csp6I GTAC 2 cut(s) 967, 1308
CviAII CATG 9 cut(s) 235, 344, 443, 547, 949, 1015, 1072, 1228, 1269
CviQI GTAC 2 cut(s) 967, 1308
DdeI CTNAG 4 cut(s) 252, 971, 1112, 1422
DpnI GATC 6 cut(s) 43, 123, 543, 587, 686, 1496
DpnII GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
DrdI GACNNNNNNGTC 1 cut(s) 983
DseDI GACNNNNNNGTC 1 cut(s) 983
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 5 cut(s) 99, 660, 776, 1230, 1457
EarI CTCTTC 5 cut(s) 99, 660, 776, 1230, 1457
Eco130I CCWWGG 2 cut(s) 343, 1268
Eco47I GGWCC 3 cut(s) 626, 812, 1062
Eco57I CTGAAG 1 cut(s) 336
EcoNI CCTNNNNNAGG 1 cut(s) 177
EcoRII CCWGG 3 cut(s) 628, 706, 1348
EcoT14I CCWWGG 2 cut(s) 343, 1268
EcoT22I ATGCAT 1 cut(s) 552
ErhI CCWWGG 2 cut(s) 343, 1268
Esp3I CGTCTC 2 cut(s) 926, 1373
FaeI CATG 9 cut(s) 238, 347, 446, 550, 952, 1018, 1075, 1231, 1272
FalI AAGNNNNNCTT 4 cut(s) 509, 541, 575, 607
FaqI GGGAC 2 cut(s) 454, 860
FatI CATG 9 cut(s) 234, 343, 442, 546, 948, 1014, 1071, 1227, 1268
Fnu4HI GCNGC 3 cut(s) 457, 853, 1293
FokI GGATG 4 cut(s) 551, 1206, 1244, 1474
Fsp4HI GCNGC 3 cut(s) 457, 853, 1293
FspBI CTAG 5 cut(s) 714, 738, 992, 1311, 1511
GlaI GCGC 2 cut(s) 837, 870
GluI GCNGC 3 cut(s) 457, 853, 1293
HaeIII GGCC 3 cut(s) 172, 791, 947
HapII CCGG 3 cut(s) 897, 923, 1155
HgaI GACGC 4 cut(s) 833, 842, 875, 1197
HhaI GCGC 2 cut(s) 838, 871
Hin1I GRCGYC 1 cut(s) 1208
Hin1II CATG 9 cut(s) 238, 347, 446, 550, 952, 1018, 1075, 1231, 1272
Hin6I GCGC 2 cut(s) 836, 869
HinP1I GCGC 2 cut(s) 836, 869
HinfI GANTC 7 cut(s) 447, 489, 857, 919, 1040, 1108, 1183
HpaII CCGG 3 cut(s) 897, 923, 1155
HphI GGTGA 5 cut(s) 484, 545, 580, 644, 1393
Hpy166II GTNNAC 4 cut(s) 306, 322, 1062, 1225
Hpy188I TCNGA 3 cut(s) 153, 1048, 1449
Hpy188III TCNNGA 5 cut(s) 219, 652, 992, 1370, 1456
Hpy8I GTNNAC 4 cut(s) 306, 322, 1062, 1225
Hpy99I CGWCG 1 cut(s) 869
HpyAV CCTTC 6 cut(s) 85, 103, 256, 364, 1027, 1276
HpyCH4III ACNGT 4 cut(s) 750, 937, 1344, 1453
HpyCH4V TGCA 3 cut(s) 337, 550, 1534
HpyF10VI GCNNNNNNNGC 3 cut(s) 687, 833, 877
HpyF3I CTNAG 4 cut(s) 252, 971, 1112, 1422
Hsp92I GRCGYC 1 cut(s) 1208
Hsp92II CATG 9 cut(s) 238, 347, 446, 550, 952, 1018, 1075, 1231, 1272
HspAI GCGC 2 cut(s) 836, 869
Kzo9I GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
LmnI GCTCC 4 cut(s) 708, 742, 1156, 1476
Lsp1109I GCAGC 3 cut(s) 468, 839, 1279
LweI GCATC 2 cut(s) 301, 559
MaeI CTAG 5 cut(s) 714, 738, 992, 1311, 1511
MaeIII GTNAC 4 cut(s) 4, 821, 974, 1399
MalI GATC 6 cut(s) 43, 123, 543, 587, 686, 1496
MboI GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
MboII GAAGA 9 cut(s) 116, 647, 677, 766, 793, 1036, 1247, 1375, 1474
MhlI GDGCHC 1 cut(s) 1349
MlsI TGGCCA 1 cut(s) 947
MluCI AATT 8 cut(s) 30, 476, 659, 1019, 1051, 1167, 1373, 1525
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 3 cut(s) 441, 851, 1102
MmeI TCCRAC 2 cut(s) 864, 1472
Mox20I TGGCCA 1 cut(s) 947
Mph1103I ATGCAT 1 cut(s) 552
MscI TGGCCA 1 cut(s) 947
MseI TTAA 9 cut(s) 132, 270, 465, 614, 842, 1001, 1170, 1263, 1298
MslI CAYNNNNRTG 3 cut(s) 911, 1230, 1273
Msp20I TGGCCA 1 cut(s) 947
MspA1I CMGCKG 1 cut(s) 852
MspCI CTTAAG 1 cut(s) 464
MspI CCGG 3 cut(s) 897, 923, 1155
MspR9I CCNGG 6 cut(s) 630, 708, 898, 924, 1155, 1350
MvaI CCWGG 3 cut(s) 630, 708, 1350
MvnI CGCG 2 cut(s) 836, 869
MwoI GCNNNNNNNGC 3 cut(s) 687, 833, 877
NciI CCSGG 3 cut(s) 898, 924, 1155
NcoI CCATGG 2 cut(s) 343, 1268
NdeII GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
NlaIII CATG 9 cut(s) 238, 347, 446, 550, 952, 1018, 1075, 1231, 1272
NlaIV GGNNCC 2 cut(s) 289, 939
NmuCI GTSAC 3 cut(s) 821, 974, 1399
NsiI ATGCAT 1 cut(s) 552
NspI RCATGY 2 cut(s) 550, 1075
PciI ACATGT 1 cut(s) 1071
PfeI GAWTC 4 cut(s) 489, 919, 1040, 1183
PflMI CCANNNNNTGG 1 cut(s) 1328
PfoI TCCNGGA 2 cut(s) 922, 1153
PkrI GCNGC 3 cut(s) 458, 854, 1294
PleI GAGTC 3 cut(s) 441, 851, 1102
PpsI GAGTC 3 cut(s) 441, 851, 1102
PscI ACATGT 1 cut(s) 1071
PshBI ATTAAT 1 cut(s) 614
PsiI TTATAA 1 cut(s) 1410
Psp6I CCWGG 3 cut(s) 628, 706, 1348
PspGI CCWGG 3 cut(s) 628, 706, 1348
PspN4I GGNNCC 2 cut(s) 289, 939
PspPI GGNCC 3 cut(s) 626, 812, 1062
PstNI CAGNNNCTG 2 cut(s) 314, 1342
PvuII CAGCTG 1 cut(s) 852
RsaI GTAC 2 cut(s) 968, 1309
RsaNI GTAC 2 cut(s) 967, 1308
RseI CAYNNNNRTG 3 cut(s) 911, 1230, 1273
SaqAI TTAA 9 cut(s) 132, 270, 465, 614, 842, 1001, 1170, 1263, 1298
SatI GCNGC 3 cut(s) 457, 853, 1293
Sau3AI GATC 6 cut(s) 41, 121, 541, 585, 684, 1494
Sau96I GGNCC 3 cut(s) 626, 812, 1062
SchI GAGTC 3 cut(s) 441, 851, 1102
ScrFI CCNGG 6 cut(s) 630, 708, 898, 924, 1155, 1350
SduI GDGCHC 1 cut(s) 1349
SfaNI GCATC 2 cut(s) 301, 559
SinI GGWCC 3 cut(s) 626, 812, 1062
SmiMI CAYNNNNRTG 3 cut(s) 911, 1230, 1273
SmlI CTYRAG 5 cut(s) 144, 464, 650, 731, 1543
SmoI CTYRAG 5 cut(s) 144, 464, 650, 731, 1543
SpeI ACTAGT 1 cut(s) 1310
Sse9I AATT 8 cut(s) 30, 476, 659, 1019, 1051, 1167, 1373, 1525
SspI AATATT 1 cut(s) 1126
SspMI CTAG 5 cut(s) 714, 738, 992, 1311, 1511
StyD4I CCNGG 6 cut(s) 628, 706, 896, 922, 1153, 1348
StyI CCWWGG 2 cut(s) 343, 1268
TaaI ACNGT 4 cut(s) 750, 937, 1344, 1453
TaqI TCGA 4 cut(s) 192, 220, 860, 1371
TaqII GACCGA 1 cut(s) 1079
TasI AATT 8 cut(s) 30, 476, 659, 1019, 1051, 1167, 1373, 1525
TfiI GAWTC 4 cut(s) 489, 919, 1040, 1183
Tru1I TTAA 9 cut(s) 132, 270, 465, 614, 842, 1001, 1170, 1263, 1298
Tru9I TTAA 9 cut(s) 132, 270, 465, 614, 842, 1001, 1170, 1263, 1298
TscAI CASTG 2 cut(s) 979, 1536
TseFI GTSAC 3 cut(s) 821, 974, 1399
TseI GCWGC 3 cut(s) 456, 852, 1292
Tsp45I GTSAC 3 cut(s) 821, 974, 1399
TspDTI ATGAA 6 cut(s) 187, 223, 431, 661, 1248, 1475
TspGWI ACGGA 1 cut(s) 435
TspRI CASTG 2 cut(s) 979, 1536
Van91I CCANNNNNTGG 1 cut(s) 1328
Vha464I CTTAAG 1 cut(s) 464
VpaK11BI GGWCC 3 cut(s) 626, 812, 1062
VspI ATTAAT 1 cut(s) 614
XagI CCTNNNNNAGG 1 cut(s) 177
XapI RAATTY 2 cut(s) 659, 1525
XbaI TCTAGA 1 cut(s) 991
XceI RCATGY 2 cut(s) 550, 1075
XspI CTAG 5 cut(s) 714, 738, 992, 1311, 1511
Zsp2I ATGCAT 1 cut(s) 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.