FvH4_1g18670

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0014085
Physical Location & Seq
Reverse (-)
10976758 .. 10981280
4523 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g18670.t1

Sequence Viewer

Length: 2964 bp
ATGACACTTTCAGCTCCAAAACCGCTGCTGATTCTGTGTACTCTATCATTTTACTTCTCTTATGTCATGGCCTTTTCGGCCGGAGACCCCCAGATCCTGCTGCGTGTGAAAGCGCAACTCGACGACCCGGATGGAAACCTCAACGACTGGGTTCCCGGCAGCAACCACAGTCCATGCAACTGGACAGGTATCACTTGTGAGCACAAAAACTTCTCCATTGTTTCAATAGACATGTCGGGGTTCAATATTCGCGGCCGGTTTCCGGTCGAGCTGTGCCGGATTCGGACGCTACAGAACCTCACTTTGAACAGCAACAGCATCAACGGTACTCTCTTAACTACACCCCTCTCTCTGTGTTCACACCTCCAAGCTTTGGAGATCGAGGACAACGAAATCGTCGGACACTTGCCGGAATTTCCTCCGGGGTTTGATGATTTACGGGTCCTGAATCTCCAAAAGAACAACTTCACTGGAGATATCCCGGAGAGTTTCGGCCGGTTTCCGCAACTTAGAGTACTGAAGCTTTCAGGGAACTTGCTCACCGGTCCGTTCCCTAAGTTGTTGACAAACCTGAGCCAGTTGACTCGTTTGGAAATGGCTTATAATCCAGCAATGAAGCCTAGTGTGTTGCCTCCAGAAATCGGAAACATGACCAATCTCGACTGGCTGTTTCTCTCTCAGATAAATCTCACAGGCCCTATTCCAGAAACGATCGGAAACTTGGTCTCGCTAACAAACCTGGACTTGTCCCGGAATTCATTATCCGGTACTATTCCAGAGAGCATTGGAAGATTGAGAAGCGCAGTGCAAATTGAGCTTTTCTTGAACCAATTGTACGGCGAATTGCCGGAGAGTCTTGCAAATTTGACGTCTCTGCAGAACTTGGATTTGTCACAGAACGGATTCACAGGTACATTCTCTGAAACAATCGCAGGAATTCGATTTGTTTCTCTGCGACTCGCCGACAACTTACTAGAAGGCTCTGTTCCGGAGATCATTGCCAACAATCCTGATCTGGTTCAGCTGCATCTCTTCAACAACAGCTTCTCCGGTACTCTCCCGGAAAATCTCGGTCGAAATTCAACTCTGCAAGAATTGGATGTTTCGACTAACAAGTTCACCGGCGAGCTGCCTAGTTCTCTCTGCTACGGTAAAAATCTCAGCAGTCTGGTCATATTCGGGAACCAATTCACTGGTAACATACCAGATACGTTGAGCCAGTGTCAATCTCTTGAATATGTACGATTCGAGTACAATCAACTCTCCGGTGAAGTACCGGCCAAGTTTTGGGGTCTGCCTCTGCTCACTGATCTACGAATGCAGAACAACAGACTCAGCGGATCAGTTTCGTCTTCCATTTCCTCTGCCAATGGTCTCCAAGTACTTACAATCTCCGGCAACATCTTCTCCGGCGAGCTTCCACCGCAGATTTGCAAGTTGTCCGAGCTGATAGAGCTGGACGTGAGCGACAATCAGTTTTCCGGTGCAGTTCCATCTTGTGTAACAGAGCTGAAGAATCTGCAGGAGCTTAGGATGCAGCACAATTTGTTCAGCGGTGAGATTCCAAGACATTTGAGTCCATGGACCCAGCTGACTGAGTTAAACCTATCGAAAAATCGATTCTCTGGTACAATTCCTCCCGAGCTAGGTGATTTGCTGGTTCTGAATTACTTGGACCTCTCTGATAACTCACTCACCGGTGAGATTCCGGTGGAATTGACCAGGCTTAAGCTCGGACAGTTCAATCTCTCAGACAACAAACTGTACGGTAAGATACCTACTGGGCTGGACTACGAGCTTTTCGTACCGGGTCTACTTGGCAACCCGGGTCTATGTAGTTTGAATTTGAAGCCGATTCATCCATGTCAGAGACGTAAATCTCATACTGCTTTATTGGCTGTTGTTCTCTCCGTTTGCATTGTACTTCTTGTTGGGTTAGTTCTTTGGTATCTGAAAATCAGAGCAAAAGTGTTTGGCGGTAAATCAAAAAGGCTTTACAGTGTGACCTCATTTCAACGGGTCGGGTTCAATGAAGACGATGTGTTACCTTCGTTAACCAATGATAATCTGATTGCGACGGGCGGTTCGGGTCATGTTTATAAGGTGAAGCTGAAGTCGGGTCAAGTTTTGGCGGTTAAGAAGCTATGGGGAGGAAGCAGCAGGAAGCCGGAGAGTGAGTTGGTCTTTAAATCCGAGGTTGAGACGCTGGGTCGGGTCCGGCATGGCAATATTGTAAAATTGGTGTTTTGTTGTAGTGGGGAGGATTGTAGGATATTGGCCTATGAGTACATGGAGAATGGGAGCTTGGGTGATGTTTTGCATGGAGAGAAGCTTGGGCCGTTGGTGGACTGGGCCGCGAGGTTCAGCGTTGCATTGGGCTCGGCCCACGGGCTGGCCTATCTTCATCATGACTGCGTCCCGTCTGTCGTTCACCGGGATGTGAAGAGCAACAACATATTGCTTGACGAGGAGTGGACTCCACGCGTGGCGGATTTCGGTCTTGCCAAGACGTTGGAGCGTGATGTGGCATCCGAACATGGTGCCATGTCACGAATAGCTGGATCTTACGGTTATATTGCGCCAGAATATGCATACACACTAAAAGTTACAGAGAAGAGCGACGTCTACAGCTTCGGTGTGGTGTTACTGGAACTGATCACCGGTAAGAGGCCGAACGACGTAACCTTTGGGGAGAACAAGGACATAGTGAAGTGGGTTACTGAGGCTGCATTGTGTTCTCCTTCCTCTTCGGATGGTGATGGTGAAAGTGACAAATGTTGTGGGATTGATCTTAGCCAGATTGTTGACCCGAGAATGAACCCAACCACAAGGGATTTCGAAGAGATTGAAAAGGTTCTGAGTGTGGCTCTTCTTTGCACCTCTGCATTCCCAACTAACAGGCCATCCATGAGAAGAGTGGTTGAATTGCTAAAAGATCAGAAACCATCTAGTCAAAAATGTTGA

Protein Analysis

988

Amino Acids

108.55

Weight (kDa)

5.55

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 66 1e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 146 - 203 4.8e-09 Leucine rich repeat
LRR_14 PF23598 213 - 299 4.2e-08 Leucine-rich repeat region
LRR_8 PF13855 386 - 445 3.9e-06 Leucine rich repeat
LRR_14 PF23598 438 - 536 2.4e-06 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 688 - 910 1.4e-35 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 689 - 895 3.6e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014085)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G65710
fragaria_vesca FvH4_1g18670
malus_domestica MD02G1194100.v1.1 MD05G1283300.v1.1 MD15G1304600.v1.1
prunus_persica Prupe.6G212600_v2.0.a1
pyrus_communis pycom02g15810 pycom15g26710
rosa_chinensis RchiOBHm_Chr2g0109521
rosa_laevigata RLG00000017742
rosa_multiflora Rmu_sc0000332.1_g000032
rosa_roxburghii Rroxscaffold_2G00134180
rosa_rugosa Rorug02G0160600
rosa_samantha Rh2AG212900 Rh2BG223100 Rh2CG214700 Rh2DG218500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 603, 2100
AasI GACNNNNNNGTC 1 cut(s) 1575
AatII GACGTC 2 cut(s) 872, 2625
AccB1I GGYRCC 1 cut(s) 2540
AccB7I CCANNNNNTGG 3 cut(s) 373, 1287, 2392
AccI GTMKAC 2 cut(s) 1813, 2625
AccII CGCG 3 cut(s) 252, 2357, 2484
AccIII TCCGGA 1 cut(s) 988
AclWI GGATC 3 cut(s) 88, 1348, 2569
AcoI YGGCCR 4 cut(s) 78, 253, 493, 1278
AcsI RAATTY 6 cut(s) 413, 754, 862, 936, 1078, 1843
AcuI CTGAAG 3 cut(s) 539, 1532, 2132
AcyI GRCGYC 2 cut(s) 869, 2622
AfiI CCNNNNNNNGG 7 cut(s) 262, 373, 641, 1287, 1646, 2392, 2667
AflII CTTAAG 1 cut(s) 1727
AflIII ACRYGT 2 cut(s) 231, 2482
AgeI ACCGGT 3 cut(s) 542, 1697, 2660
AhdI GACNNNNNGTC 1 cut(s) 2208
AjiI CACGTC 1 cut(s) 1462
AjnI CCWGG 2 cut(s) 738, 1721
AjuI GAANNNNNNNTTGG 2 cut(s) 2288, 2320
Alw21I GWGCWC 1 cut(s) 204
Alw26I GTCTC 6 cut(s) 78, 730, 876, 1379, 1864, 2195
AlwI GGATC 3 cut(s) 88, 1348, 2569
AlwNI CAGNNNCTG 1 cut(s) 97
Ama87I CYCGRG 3 cut(s) 1640, 1825, 2809
Aor13HI TCCGGA 1 cut(s) 988
ApeKI GCWGC 8 cut(s) 25, 100, 159, 1024, 1129, 1537, 2157, 2726
ApoI RAATTY 6 cut(s) 413, 754, 862, 936, 1078, 1843
ArsI GACNNNNNNTTYG 6 cut(s) 854, 886, 2068, 2100, 2669, 2701
AsiGI ACCGGT 3 cut(s) 542, 1697, 2660
Asp700I GAANNNNTTC 4 cut(s) 464, 902, 1187, 2853
AspLEI GCGC 3 cut(s) 115, 803, 2581
AspS9I GGNCC 9 cut(s) 442, 545, 695, 1584, 1675, 2215, 2336, 2352, 2383
AsuII TTCGAA 1 cut(s) 2838
AvaI CYCGRG 3 cut(s) 1640, 1825, 2809
AvaII GGWCC 5 cut(s) 442, 545, 1584, 1675, 2215
BanI GGYRCC 1 cut(s) 2540
BanII GRGCYC 1 cut(s) 2381
BbsI GAAGAC 2 cut(s) 1344, 2040
Bbv12I GWGCWC 1 cut(s) 204
BbvI GCAGC 8 cut(s) 12, 87, 171, 1011, 1116, 1549, 2169, 2713
BccI CCATC 6 cut(s) 125, 1501, 2747, 2753, 2911, 2953
BceAI ACGGC 2 cut(s) 853, 2323
BcgI CGANNNNNNTGC 4 cut(s) 2361, 2395, 2522, 2556
BciT130I CCWGG 2 cut(s) 740, 1723
BclI TGATCA 1 cut(s) 2655
BcoDI GTCTC 6 cut(s) 78, 730, 876, 1379, 1864, 2195
BfaI CTAG 5 cut(s) 621, 974, 1134, 1646, 2949
BfmI CTRYAG 4 cut(s) 290, 875, 1520, 2626
BfrI CTTAAG 1 cut(s) 1727
BglI GCCNNNNNGGC 1 cut(s) 77
BmcAI AGTACT 2 cut(s) 516, 1383
Bme18I GGWCC 5 cut(s) 442, 545, 1584, 1675, 2215
BmeRI GACNNNNNGTC 1 cut(s) 2208
BmeT110I CYCGRG 3 cut(s) 1640, 1825, 2809
BmgBI CACGTC 1 cut(s) 1462
BmgT120I GGNCC 9 cut(s) 442, 545, 695, 1584, 1675, 2215, 2336, 2352, 2383
BmiI GGNNCC 6 cut(s) 153, 443, 1184, 1586, 2216, 2542
BmrI ACTGGG 3 cut(s) 157, 1791, 2359
BmsI GCATC 4 cut(s) 327, 1036, 1524, 2537
BmuI ACTGGG 3 cut(s) 157, 1791, 2359
BpiI GAAGAC 2 cut(s) 1344, 2040
BplI GAGNNNNNCTC 2 cut(s) 2851, 2883
BpmI CTGGAG 2 cut(s) 492, 618
Bpu10I CCTNAGC 2 cut(s) 572, 1529
Bpu14I TTCGAA 1 cut(s) 2838
Bsa29I ATCGAT 1 cut(s) 1618
BsaHI GRCGYC 2 cut(s) 869, 2622
BsaI GGTCTC 3 cut(s) 78, 730, 1379
BsaJI CCNNGG 5 cut(s) 422, 1580, 1825, 2193, 2386
Bsc4I CCNNNNNNNGG 7 cut(s) 262, 373, 641, 1287, 1646, 2392, 2667
Bse118I RCCGGY 7 cut(s) 255, 495, 542, 1121, 1276, 1697, 2660
Bse3DI GCAATG 2 cut(s) 618, 996
BseAI TCCGGA 1 cut(s) 988
BseBI CCWGG 2 cut(s) 740, 1723
BseCI ATCGAT 1 cut(s) 1618
BseDI CCNNGG 5 cut(s) 422, 1580, 1825, 2193, 2386
BseGI GGATG 8 cut(s) 136, 1105, 1539, 1858, 2443, 2528, 2758, 2903
BseLI CCNNNNNNNGG 7 cut(s) 262, 373, 641, 1287, 1646, 2392, 2667
BseMI GCAATG 2 cut(s) 618, 996
BseMII CTCAG 8 cut(s) 563, 692, 1174, 1348, 1587, 1764, 2712, 2849
BseRI GAGGAG 1 cut(s) 2483
BseX3I CGGCCG 3 cut(s) 78, 253, 493
BseXI GCAGC 8 cut(s) 12, 87, 171, 1011, 1116, 1549, 2169, 2713
BseYI CCCAGC 2 cut(s) 1587, 2206
BsgI GTGCAG 1 cut(s) 1506
Bsh1236I CGCG 3 cut(s) 252, 2357, 2484
Bsh1285I CGRYCG 6 cut(s) 81, 256, 267, 496, 714, 1075
BshNI GGYRCC 1 cut(s) 2540
BshTI ACCGGT 3 cut(s) 542, 1697, 2660
BshVI ATCGAT 1 cut(s) 1618
BsiEI CGRYCG 6 cut(s) 81, 256, 267, 496, 714, 1075
BsiHKAI GWGCWC 1 cut(s) 204
BsiHKCI CYCGRG 3 cut(s) 1640, 1825, 2809
BslFI GGGAC 2 cut(s) 733, 2402
BslI CCNNNNNNNGG 7 cut(s) 262, 373, 641, 1287, 1646, 2392, 2667
BsmAI GTCTC 6 cut(s) 78, 730, 876, 1379, 1864, 2195
BsmBI CGTCTC 3 cut(s) 876, 1864, 2195
BsmFI GGGAC 2 cut(s) 733, 2402
BsmI GAATGC 2 cut(s) 1323, 2885
Bso31I GGTCTC 3 cut(s) 78, 730, 1379
BsoBI CYCGRG 3 cut(s) 1640, 1825, 2809
Bsp119I TTCGAA 1 cut(s) 2838
Bsp1286I GDGCHC 2 cut(s) 204, 2381
Bsp13I TCCGGA 1 cut(s) 988
Bsp19I CCATGG 1 cut(s) 1580
BspCNI CTCAG 8 cut(s) 564, 691, 1173, 1347, 1588, 1763, 2713, 2850
BspDI ATCGAT 1 cut(s) 1618
BspEI TCCGGA 1 cut(s) 988
BspFNI CGCG 3 cut(s) 252, 2357, 2484
BspHI TCATGA 1 cut(s) 2407
BspLI GGNNCC 6 cut(s) 153, 443, 1184, 1586, 2216, 2542
BspMAI CTGCAG 2 cut(s) 879, 1524
BspPI GGATC 3 cut(s) 88, 1348, 2569
BspQI GCTCTTC 3 cut(s) 2438, 2609, 2874
BspT104I TTCGAA 1 cut(s) 2838
BspT107I GGYRCC 1 cut(s) 2540
BspTI CTTAAG 1 cut(s) 1727
BspTNI GGTCTC 3 cut(s) 78, 730, 1379
BsrDI GCAATG 2 cut(s) 618, 996
BsrFI RCCGGY 7 cut(s) 255, 495, 542, 1121, 1276, 1697, 2660
BssAI RCCGGY 7 cut(s) 255, 495, 542, 1121, 1276, 1697, 2660
BssECI CCNNGG 5 cut(s) 422, 1580, 1825, 2193, 2386
BssNI GRCGYC 2 cut(s) 869, 2622
BssT1I CCWWGG 1 cut(s) 1580
Bst2UI CCWGG 2 cut(s) 740, 1723
Bst4CI ACNGT 8 cut(s) 170, 326, 1151, 1740, 1764, 1769, 2000, 2570
Bst6I CTCTTC 7 cut(s) 1037, 2438, 2609, 2752, 2835, 2874, 2908
BstACI GRCGYC 2 cut(s) 869, 2622
BstAFI CTTAAG 1 cut(s) 1727
BstBI TTCGAA 1 cut(s) 2838
BstC8I GCNNGC 3 cut(s) 1127, 1415, 2394
BstDSI CCRYGG 2 cut(s) 1580, 2386
BstF5I GGATG 8 cut(s) 136, 1105, 1539, 1858, 2443, 2528, 2758, 2903
BstFNI CGCG 3 cut(s) 252, 2357, 2484
BstHHI GCGC 3 cut(s) 115, 803, 2581
BstMAI GTCTC 6 cut(s) 78, 730, 876, 1379, 1864, 2195
BstMCI CGRYCG 6 cut(s) 81, 256, 267, 496, 714, 1075
BstMWI GCNNNNNNNGC 6 cut(s) 77, 814, 1423, 1453, 1534, 1895
BstNI CCWGG 2 cut(s) 740, 1723
BstNSI RCATGY 1 cut(s) 235
BstSFI CTRYAG 4 cut(s) 290, 875, 1520, 2626
BstUI CGCG 3 cut(s) 252, 2357, 2484
BstV1I GCAGC 8 cut(s) 12, 87, 171, 1011, 1116, 1549, 2169, 2713
BstV2I GAAGAC 2 cut(s) 1344, 2040
BstX2I RGATCY 2 cut(s) 93, 2561
BstXI CCANNNNNNTGG 3 cut(s) 180, 1193, 2512
BstYI RGATCY 2 cut(s) 93, 2561
BstZI CGGCCG 3 cut(s) 78, 253, 493
Bsu15I ATCGAT 1 cut(s) 1618
BsuTUI ATCGAT 1 cut(s) 1618
BtgI CCRYGG 2 cut(s) 1580, 2386
BtrI CACGTC 1 cut(s) 1462
BtsCI GGATG 8 cut(s) 136, 1105, 1539, 1858, 2443, 2528, 2758, 2903
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 6 cut(s) 468, 810, 1191, 1226, 1305, 2005
Cac8I GCNNGC 3 cut(s) 1127, 1415, 2394
CaiI CAGNNNCTG 1 cut(s) 97
CciI TCATGA 1 cut(s) 2407
CfoI GCGC 3 cut(s) 115, 803, 2581
Cfr10I RCCGGY 7 cut(s) 255, 495, 542, 1121, 1276, 1697, 2660
Cfr13I GGNCC 9 cut(s) 442, 545, 695, 1584, 1675, 2215, 2336, 2352, 2383
Cfr9I CCCGGG 1 cut(s) 1825
ClaI ATCGAT 1 cut(s) 1618
CpoI CGGWCCG 1 cut(s) 545
CseI GACGC 3 cut(s) 295, 2212, 2404
CspAI ACCGGT 3 cut(s) 542, 1697, 2660
CspCI CAANNNNNGTGG 2 cut(s) 2761, 2796
CspI CGGWCCG 1 cut(s) 545
DraI TTTAAA 1 cut(s) 2188
DrdI GACNNNNNNGTC 1 cut(s) 1575
DriI GACNNNNNGTC 1 cut(s) 2208
DseDI GACNNNNNNGTC 1 cut(s) 1575
EaeI YGGCCR 4 cut(s) 78, 253, 493, 1278
EagI CGGCCG 3 cut(s) 78, 253, 493
Eam1104I CTCTTC 7 cut(s) 1037, 2438, 2609, 2752, 2835, 2874, 2908
Eam1105I GACNNNNNGTC 1 cut(s) 2208
EarI CTCTTC 7 cut(s) 1037, 2438, 2609, 2752, 2835, 2874, 2908
EciI GGCGGA 1 cut(s) 2504
EclXI CGGCCG 3 cut(s) 78, 253, 493
Eco130I CCWWGG 1 cut(s) 1580
Eco24I GRGCYC 1 cut(s) 2381
Eco31I GGTCTC 3 cut(s) 78, 730, 1379
Eco32I GATATC 1 cut(s) 478
Eco47I GGWCC 5 cut(s) 442, 545, 1584, 1675, 2215
Eco52I CGGCCG 3 cut(s) 78, 253, 493
Eco57I CTGAAG 3 cut(s) 539, 1532, 2132
Eco88I CYCGRG 3 cut(s) 1640, 1825, 2809
EcoO109I RGGNCCY 2 cut(s) 442, 695
EcoRI GAATTC 2 cut(s) 754, 936
EcoRII CCWGG 2 cut(s) 738, 1721
EcoRV GATATC 1 cut(s) 478
EcoT14I CCWWGG 1 cut(s) 1580
EcoT22I ATGCAT 1 cut(s) 2593
EcoT38I GRGCYC 1 cut(s) 2381
ErhI CCWWGG 1 cut(s) 1580
Esp3I CGTCTC 3 cut(s) 876, 1864, 2195
FalI AAGNNNNNCTT 2 cut(s) 449, 481
FbaI TGATCA 1 cut(s) 2655
FblI GTMKAC 2 cut(s) 1813, 2625
FokI GGATG 8 cut(s) 143, 1112, 1546, 1845, 2450, 2515, 2765, 2890
FriOI GRGCYC 1 cut(s) 2381
FspBI CTAG 5 cut(s) 621, 974, 1134, 1646, 2949
GlaI GCGC 3 cut(s) 114, 802, 2580
GsaI CCCAGC 2 cut(s) 1591, 2210
GsuI CTGGAG 2 cut(s) 492, 618
HgaI GACGC 3 cut(s) 295, 2212, 2404
HhaI GCGC 3 cut(s) 115, 803, 2581
Hin1I GRCGYC 2 cut(s) 869, 2622
Hin6I GCGC 3 cut(s) 113, 801, 2579
HinP1I GCGC 3 cut(s) 113, 801, 2579
HincII GTYRAC 4 cut(s) 564, 582, 2055, 2806
HindII GTYRAC 4 cut(s) 564, 582, 2055, 2806
HindIII AAGCTT 3 cut(s) 369, 521, 2330
HpaI GTTAAC 1 cut(s) 2055
Hpy99I CGWCG 5 cut(s) 125, 401, 2080, 2624, 2681
HpyAV CCTTC 3 cut(s) 971, 2058, 2751
HpyCH4III ACNGT 8 cut(s) 170, 326, 1151, 1740, 1764, 1769, 2000, 2570
HpyCH4IV ACGT 7 cut(s) 869, 1211, 1461, 1873, 2510, 2622, 2679
HpyF10VI GCNNNNNNNGC 6 cut(s) 77, 814, 1423, 1453, 1534, 1895
HpySE526I ACGT 7 cut(s) 869, 1211, 1461, 1873, 2510, 2622, 2679
Hsp92I GRCGYC 2 cut(s) 869, 2622
HspAI GCGC 3 cut(s) 113, 801, 2579
Kpn2I TCCGGA 1 cut(s) 988
Ksp22I TGATCA 1 cut(s) 2655
KspAI GTTAAC 1 cut(s) 2055
LguI GCTCTTC 3 cut(s) 2438, 2609, 2874
LmnI GCTCC 4 cut(s) 19, 1525, 2301, 2515
Lsp1109I GCAGC 8 cut(s) 12, 87, 171, 1011, 1116, 1549, 2169, 2713
LweI GCATC 4 cut(s) 327, 1036, 1524, 2537
MaeI CTAG 5 cut(s) 621, 974, 1134, 1646, 2949
MaeII ACGT 7 cut(s) 869, 1211, 1461, 1873, 2510, 2622, 2679
MfeI CAATTG 1 cut(s) 830
MflI RGATCY 2 cut(s) 93, 2561
MhlI GDGCHC 2 cut(s) 204, 2381
MluI ACGCGT 1 cut(s) 2482
MlyI GAGTC 6 cut(s) 577, 862, 951, 1326, 1585, 2470
MmeI TCCRAC 2 cut(s) 379, 2493
Mph1103I ATGCAT 1 cut(s) 2593
MroI TCCGGA 1 cut(s) 988
MroXI GAANNNNTTC 4 cut(s) 464, 902, 1187, 2853
MseI TTAA 6 cut(s) 335, 1601, 1728, 2054, 2136, 2187
MslI CAYNNNNRTG 1 cut(s) 2436
MspA1I CMGCKG 5 cut(s) 25, 1024, 1338, 1554, 1591
MspCI CTTAAG 1 cut(s) 1727
MunI CAATTG 1 cut(s) 830
Mva1269I GAATGC 2 cut(s) 1323, 2885
MvaI CCWGG 2 cut(s) 740, 1723
MvnI CGCG 3 cut(s) 252, 2357, 2484
MwoI GCNNNNNNNGC 6 cut(s) 77, 814, 1423, 1453, 1534, 1895
NcoI CCATGG 1 cut(s) 1580
NlaIV GGNNCC 6 cut(s) 153, 443, 1184, 1586, 2216, 2542
NmeAIII GCCGAG 1 cut(s) 2360
NmuCI GTSAC 4 cut(s) 891, 2002, 2547, 2768
NsiI ATGCAT 1 cut(s) 2593
NspI RCATGY 1 cut(s) 235
NspV TTCGAA 1 cut(s) 2838
PagI TCATGA 1 cut(s) 2407
PciI ACATGT 1 cut(s) 231
PciSI GCTCTTC 3 cut(s) 2438, 2609, 2874
PcsI WCGNNNNNNNCGW 2 cut(s) 387, 1800
PctI GAATGC 2 cut(s) 1323, 2885
PdmI GAANNNNTTC 4 cut(s) 464, 902, 1187, 2853
PflFI GACNNNGTC 1 cut(s) 2414
PflMI CCANNNNNTGG 3 cut(s) 373, 1287, 2392
PfoI TCCNGGA 3 cut(s) 480, 749, 1059
PinAI ACCGGT 3 cut(s) 542, 1697, 2660
Ple19I CGATCG 1 cut(s) 714
PleI GAGTC 6 cut(s) 577, 861, 951, 1326, 1584, 2470
PpsI GAGTC 6 cut(s) 577, 861, 951, 1326, 1584, 2470
PpuMI RGGWCCY 1 cut(s) 442
PscI ACATGT 1 cut(s) 231
PsiI TTATAA 2 cut(s) 603, 2100
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 2 cut(s) 738, 1721
PspFI CCCAGC 2 cut(s) 1587, 2206
PspGI CCWGG 2 cut(s) 738, 1721
PspN4I GGNNCC 6 cut(s) 153, 443, 1184, 1586, 2216, 2542
PspPI GGNCC 9 cut(s) 442, 545, 695, 1584, 1675, 2215, 2336, 2352, 2383
PspPPI RGGWCCY 1 cut(s) 442
PsrI GAACNNNNNNTAC 2 cut(s) 818, 850
PstI CTGCAG 2 cut(s) 879, 1524
PstNI CAGNNNCTG 1 cut(s) 97
PsuI RGATCY 2 cut(s) 93, 2561
PsyI GACNNNGTC 1 cut(s) 2414
PvuI CGATCG 1 cut(s) 714
PvuII CAGCTG 2 cut(s) 1024, 1591
RseI CAYNNNNRTG 1 cut(s) 2436
Rsr2I CGGWCCG 1 cut(s) 545
RsrII CGGWCCG 1 cut(s) 545
SapI GCTCTTC 3 cut(s) 2438, 2609, 2874
SaqAI TTAA 6 cut(s) 335, 1601, 1728, 2054, 2136, 2187
Sau96I GGNCC 9 cut(s) 442, 545, 695, 1584, 1675, 2215, 2336, 2352, 2383
ScaI AGTACT 2 cut(s) 516, 1383
SchI GAGTC 6 cut(s) 577, 862, 951, 1326, 1585, 2470
SduI GDGCHC 2 cut(s) 204, 2381
SfaNI GCATC 4 cut(s) 327, 1036, 1524, 2537
SfcI CTRYAG 4 cut(s) 290, 875, 1520, 2626
SfiI GGCCNNNNNGGCC 1 cut(s) 77
SfuI TTCGAA 1 cut(s) 2838
SgrAI CRCCGGYG 2 cut(s) 1121, 1697
SinI GGWCC 5 cut(s) 442, 545, 1584, 1675, 2215
SmaI CCCGGG 1 cut(s) 1827
SmiMI CAYNNNNRTG 1 cut(s) 2436
SmlI CTYRAG 1 cut(s) 1727
SmoI CTYRAG 1 cut(s) 1727
SspI AATATT 2 cut(s) 247, 2230
SspMI CTAG 5 cut(s) 621, 974, 1134, 1646, 2949
StyI CCWWGG 1 cut(s) 1580
TaaI ACNGT 8 cut(s) 170, 326, 1151, 1740, 1764, 1769, 2000, 2570
TaiI ACGT 7 cut(s) 872, 1214, 1464, 1876, 2513, 2625, 2682
TaqII GACCGA 2 cut(s) 1061, 2486
TatI WGTACW 6 cut(s) 38, 514, 1251, 1381, 1921, 2286
TauI GCSGC 2 cut(s) 255, 2357
Tru1I TTAA 6 cut(s) 335, 1601, 1728, 2054, 2136, 2187
Tru9I TTAA 6 cut(s) 335, 1601, 1728, 2054, 2136, 2187
TscAI CASTG 6 cut(s) 475, 810, 1198, 1226, 1312, 2005
TseFI GTSAC 4 cut(s) 891, 2002, 2547, 2768
TseI GCWGC 8 cut(s) 25, 100, 159, 1024, 1129, 1537, 2157, 2726
Tsp45I GTSAC 4 cut(s) 891, 2002, 2547, 2768
TspDTI ATGAA 6 cut(s) 629, 747, 1847, 2046, 2393, 2831
TspGWI ACGGA 3 cut(s) 537, 915, 1900
TspMI CCCGGG 1 cut(s) 1825
TspRI CASTG 6 cut(s) 475, 810, 1198, 1226, 1312, 2005
Tth111I GACNNNGTC 1 cut(s) 2414
Van91I CCANNNNNTGG 3 cut(s) 373, 1287, 2392
Vha464I CTTAAG 1 cut(s) 1727
VpaK11BI GGWCC 5 cut(s) 442, 545, 1584, 1675, 2215
XapI RAATTY 6 cut(s) 413, 754, 862, 936, 1078, 1843
XceI RCATGY 1 cut(s) 235
XcmI CCANNNNNNNNNTGG 1 cut(s) 2914
XmaI CCCGGG 1 cut(s) 1825
XmiI GTMKAC 2 cut(s) 1813, 2625
XmnI GAANNNNTTC 4 cut(s) 464, 902, 1187, 2853
XspI CTAG 5 cut(s) 621, 974, 1134, 1646, 2949
ZraI GACGTC 2 cut(s) 870, 2623
ZrmI AGTACT 2 cut(s) 516, 1383
Zsp2I ATGCAT 1 cut(s) 2593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.