FvH4_1g22060
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0016140
Physical Location & Seq
Reverse (-)
14003875 .. 14010219
6345 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22060.t1

Sequence Viewer

Length: 3195 bp
ATGATTAGCCCCCTTCCGTTTTCGATGAACAATCACATCCTCACTCTTCTCTACTTCCTCTCTCTTCTGGCGGCCTCCGCCTTCTCCGCCACCGACTCCGAGCTCCGATCTCTCTACGAGTTCAAGAAAGGGATCCAGACCGACCCGCTCCGGAAGGTTCTGGACACATGGACCGACTCTTCACTCACTCTTTCTCAGTCTTGCCCTCCGTGGACCGGCGTCTACTGCAACGACGCCGGCAATGTCGTCGCCGTCACACTCGACGGCTTCGGCCTCGGCGGCGAGCTTAAGCTGAACACTCTCACTGGTCTAAATGCGTTGCAGAATCTCAGTCTTGCTAACAATGACTTCTCCGGTCGGGTCCCGCCGGGGCTGGGAGCAATGTCCTCTCTCAAGTACTTGGATCTATCCCAGAACCGGTTTTACGGCCCGATCCCGGCCCGGATAACCGACCTGTGGGGATTGAATTATCTCAACTTGTCTCGGAATCTATTCAAAGGCGGGTTTCCGGGTCGGGTGTCGAATCTGAATCAGCTCAAGGTGTTTGATGTGCATTCCAATCAGCTCTGGGGGGACGTTTCGGAGTTGTTGCAGGAGTTTCGCAATGTGGAGTATGTGGATTTGAGTAACAATGAGTTTTTCGGAGGGATTGGGCTTGGTTCGGACAATGTTTCCAGCTTATCAAACACTGTGCGTCACTTGAACTTCAGCCATAATAATCTGACTGGCGGATTCTTTAAGGGTGATTCCATTGGTTTGTTTAGGAACTTGCAAGTTTTGGACTTGGGTGGTAATCAGATCACAGGGGAGCTTCCTTCGTTTGGGTCGTTGTCGAATTTGCGAGTTTTGAGGCTGGCTAATAATCAGTTGTTTGGGGGAATACCGGAGGAGTTGCTTGGGAGTTCGATTCCGATGGAGGAGTTGGATCTTAGTGGAAATGCTTTTACAGGTTCTATCACTGGAATTAACTCTACAACTATGAAAGTCTTGAATCTTTCATCAAATGGTATGTCGGGCACATTGCAGAACGTGGATATGAGGAGTTGTGTAGTGGTTGACTTGAGCAGAAATAAGATTTCAGGTGATATATCAATGTTGCAGAAAATGGGTGCTGATTTAGAGGTTCTTGATTTGAGTTCAAACAATTTTTCTGGAAGCTTCACAAACTTGACTTTGCAGTTCGAGAGATTAACTTCACTTAGTCTAAGAGATAATTTATTATTAGGGTCATTGCCTTCGATACTGAAGGCTTGCCCCAGACTCTCTACAGTTGACTTGAGTCAAAATGAGTTCAGTGGTACCATTCCTGGCAGTTTCTTCTCTTCACTGACGTTGACAAGGTTGAATCTTTCACAAAATCACTTGAATGGGCCAATTCCTCTCCAAGGCGGACGTGTAAGTGAATTCTTAGCTCTTCCTCCAGATTTGCCAATTGAGAGTGTCGATCTCTCCAATAATTCTTTATCGGGTACCCTTCCTCGGGCCATTGGTAACATGGTTGAACTCAAATTGCTAAACGTTGCAAAGAATCAGTTTTCAGGAGAGCTACCTAGTGAATTGAGTAAACTTGATAGATTGGAGTACCTTGATTTATCAGGAAACAAATTCAAGGGCGCAATTCCTGAGAAGCTTCCATCCAGCTTAACTGTATTTAATGTCTCCAATAATGATCTATCTGGTTCTATACCGGAGAATTTAAAAAGCTTCCCCATGTCTTCATTTCATCCTGGAAACGAGTTGCTAAACTTGCCAAATAATGGTCGGGGAAGACCTTCAGTTCCAGATCATATTCCGGGACAAGGAAAAAGTCATACTTCAAAGGCTCATATTAGGATAGCAATCATTGTTGCTTCAGTTGGAGTTACTTTGATGATAGTTTTTGTTTTATTGGTTTATCATCAAACACACCATAAAGGATTTCATGGAAGAAGTGGGTTTGGTGGTGAAAATACAGGGACAGATGTTAAGATTGGCAGATTCACACGTCCTTCATTTTTGAATTTCCATACGAACGTTCAGCCTCCACCAACTTCATTGAGCTTTTCAAATGATCACTTGCTAACTTCACAATCCAGGTCATTGTCAGGGCAGGCAGAGTTTGTACCAGAAATTGGGAAGCCTGTCTTACCTGGGGAAGCAGCAACAAGTTCTACACCTATGAATCTTCTTGATAACCAGCCTACAACATCTGGAAGGAAGTCCTCCCCTGGTTCTCCACTATCTTCCTCACCTCGTTTTATAGAGGCATATGAGCAGCCTGTAATACTGGATGTGTACTCACCAGATCGGTTGGCTGGAGAACTGTTCTTCCTAGATGCTTCATTACAATTTACAGCTGAGGAATTATCTCGAGCTCCTGCAGAAGTTCTAGGCAGAAGCAGCCATGGAACTCTGTACAAAGCTACTTTAGATAGTGGGCATATGTTGACTGTGAAATGGTTACGGGTCGGGCTGGTCAAGCACAAGAAAGATTTTGCCAAGGAAGTCAAAAGGATTGGCTCTGTAAGGCATCCAAACATTGTTCCTTTACGGGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCAGACTATGTCCAGGGAGATAGCTTGGCCCTACATCTTTATGAGAGCACACCTCGGAGGTACTCCCCATTATCATTCAACCAAAGGCTAAAAGTAGCTGTGGAGGTTGCTCGATGTTTGCTCTACCTACATGATAGAGGCCTGCCCCATGGGAACCTAAAGCCAACTAATGTAATTCTGGCAGGTCCTGAGTACCATCCTCGCCTTACTGATTACAGTCTTCACCGTCTAATGACACCAGCTGGTGTTGCAGAGCAGTTTTTAAATATGGGAGCTCTTGGTTACCGTGCTCCAGAATTTGCTACTGCGGCCAAACCAGTCCCTTCTTTCAAAGCTGATGTTTATTCGTTTGGGGTGATTTTGATGGAAATGTTAACCAGAAGGAGTGCCGGTGACATTATATCGGGTCAGTCAGGGGCGGTTGATCTCACAGACTGGGTTCGGCTTTGTGATCAAGAAGGACGAGGAATGGATTGTATCGACAGAGACATTGCTGGTGGGGAAGAACCCTCAAAAGCAATGGATGAATTGCTTGCAATATCACTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTATTTGACAACCTCTGTTCAATATCCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0016020 GO:0044424 GO:0044444 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

1065

Amino Acids

116.08

Weight (kDa)

6.41

Isoelectric Point (pI)

37.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_4 PF12799 256 - 290 1e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 396 - 455 1e-05 Leucine rich repeat
LRR_8 PF13855 479 - 536 3.4e-07 Leucine rich repeat
Pkinase PF00069 788 - 990 7.2e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 788 - 985 1.3e-21 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016140)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10020 AT5G10020
fragaria_vesca FvH4_1g22060
malus_domestica MD01G1018200.v1.1
pyrus_communis pycom01g04790
rosa_chinensis RchiOBHm_Chr2g0116131
rosa_laevigata RLG00000018242
rosa_multiflora Rmu_sc0002288.1_g000016
rosa_roxburghii Rroxscaffold_2G00127470
rosa_rugosa Rorug02G0203700
rosa_samantha Rh2AG260100 Rh2BG271100 Rh2CG266400 Rh2DG268300
rosa_wichuraiana Rw2G020370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2747
Acc65I GGTACC 2 cut(s) 1298, 1469
AccB1I GGYRCC 2 cut(s) 1298, 1469
AccB7I CCANNNNNTGG 2 cut(s) 1757, 2111
AccBSI CCGCTC 1 cut(s) 148
AccI GTMKAC 1 cut(s) 222
AccIII TCCGGA 1 cut(s) 150
AclI AACGTT 2 cut(s) 1518, 2013
AclWI GGATC 5 cut(s) 127, 140, 411, 427, 933
AcoI YGGCCR 1 cut(s) 2883
AcsI RAATTY 6 cut(s) 835, 1403, 1604, 1693, 1999, 2870
AcuI CTGAAG 4 cut(s) 691, 1265, 1758, 1836
AcyI GRCGYC 2 cut(s) 219, 234
AfaI GTAC 9 cut(s) 398, 1300, 1471, 1583, 2103, 2276, 2396, 2636, 2768
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 2 cut(s) 1393, 1982
AgeI ACCGGT 1 cut(s) 417
AjiI CACGTC 2 cut(s) 1394, 1985
AjnI CCWGG 6 cut(s) 1306, 1726, 2072, 2128, 2206, 2586
AleI CACNNNNGTG 1 cut(s) 3121
AloI GAACNNNNNNTCC 2 cut(s) 2292, 2324
Alw21I GWGCWC 5 cut(s) 105, 2356, 2624, 2851, 2866
Alw26I GTCTC 3 cut(s) 486, 1663, 3054
AlwI GGATC 5 cut(s) 127, 140, 411, 427, 933
AlwNI CAGNNNCTG 1 cut(s) 2762
Ama87I CYCGRG 2 cut(s) 1479, 2349
Aor13HI TCCGGA 1 cut(s) 150
ApeKI GCWGC 3 cut(s) 2138, 2254, 2379
ApoI RAATTY 6 cut(s) 835, 1403, 1604, 1693, 1999, 2870
ArsI GACNNNNNNTTYG 2 cut(s) 995, 1027
AsiGI ACCGGT 1 cut(s) 417
Asp700I GAANNNNTTC 2 cut(s) 491, 1771
Asp718I GGTACC 2 cut(s) 1298, 1469
AspA2I CCTAGG 1 cut(s) 2549
AspLEI GCGC 1 cut(s) 1616
AsuC2I CCSGG 5 cut(s) 369, 437, 442, 510, 1794
AsuHPI GGTGA 8 cut(s) 755, 1094, 1955, 2220, 2271, 2789, 2941, 2978
AvaI CYCGRG 2 cut(s) 1479, 2349
AvaII GGWCC 4 cut(s) 171, 213, 361, 2759
AvrII CCTAGG 1 cut(s) 2549
BaeGI GKGCMC 1 cut(s) 1019
BamHI GGATCC 1 cut(s) 132
BanI GGYRCC 2 cut(s) 1298, 1469
BanII GRGCYC 3 cut(s) 105, 2356, 2851
BbsI GAAGAC 3 cut(s) 1707, 1774, 2786
Bbv12I GWGCWC 5 cut(s) 105, 2356, 2624, 2851, 2866
BbvCI CCTCAGC 1 cut(s) 2337
BbvI GCAGC 3 cut(s) 2150, 2266, 2391
BccI CCATC 4 cut(s) 907, 1642, 2778, 2932
BceAI ACGGC 3 cut(s) 236, 280, 442
BcgI CGANNNNNNTGC 4 cut(s) 229, 263, 581, 615
BciT130I CCWGG 6 cut(s) 1308, 1728, 2074, 2130, 2208, 2588
BclI TGATCA 2 cut(s) 2050, 3025
BcnI CCSGG 5 cut(s) 369, 437, 442, 510, 1794
BcoDI GTCTC 3 cut(s) 486, 1663, 3054
BfaI CTAG 4 cut(s) 1551, 2312, 2369, 2550
BfmI CTRYAG 2 cut(s) 1266, 2358
BfrI CTTAAG 1 cut(s) 287
BfuAI ACCTGC 1 cut(s) 2747
BglI GCCNNNNNGGC 1 cut(s) 279
BisI GCNGC 6 cut(s) 72, 280, 2139, 2255, 2380, 2883
BlnI CCTAGG 1 cut(s) 2549
BlsI GCNGC 6 cut(s) 73, 281, 2140, 2256, 2381, 2884
BmcAI AGTACT 1 cut(s) 398
Bme18I GGWCC 4 cut(s) 171, 213, 361, 2759
BmeT110I CYCGRG 2 cut(s) 1479, 2349
BmgBI CACGTC 2 cut(s) 1394, 1985
BmiI GGNNCC 7 cut(s) 134, 362, 363, 1300, 1471, 2547, 2729
BmrI ACTGGG 1 cut(s) 3019
BmsI GCATC 2 cut(s) 2305, 2518
BmuI ACTGGG 1 cut(s) 3019
BoxI GACNNNNGTC 2 cut(s) 218, 1278
BpiI GAAGAC 3 cut(s) 1707, 1774, 2786
BplI GAGNNNNNCTC 2 cut(s) 2611, 2643
BpmI CTGGAG 3 cut(s) 1404, 2316, 2850
Bpu10I CCTNAGC 1 cut(s) 2337
BpuEI CTTGAG 4 cut(s) 377, 521, 1081, 1297
BpuMI CCSGG 5 cut(s) 369, 437, 442, 510, 1794
BsaBI GATNNNNATC 1 cut(s) 1838
BsaHI GRCGYC 2 cut(s) 219, 234
BsaWI WCCGGW 5 cut(s) 150, 353, 417, 883, 1687
BsaXI ACNNNNNCTCC 2 cut(s) 2950, 2980
Bse118I RCCGGY 4 cut(s) 215, 236, 417, 2963
Bse1I ACTGG 6 cut(s) 310, 730, 964, 2271, 2891, 3014
Bse3DI GCAATG 7 cut(s) 247, 387, 610, 1019, 1229, 3063, 3099
Bse8I GATNNNNATC 1 cut(s) 1838
BseAI TCCGGA 1 cut(s) 150
BseBI CCWGG 6 cut(s) 1308, 1728, 2074, 2130, 2208, 2588
BseGI GGATG 7 cut(s) 36, 1634, 1723, 2275, 2509, 2770, 3103
BseJI GATNNNNATC 1 cut(s) 1838
BseMI GCAATG 7 cut(s) 247, 387, 610, 1019, 1229, 3063, 3099
BseMII CTCAG 6 cut(s) 209, 343, 1614, 2328, 2754, 3133
BseNI ACTGG 6 cut(s) 310, 730, 964, 2271, 2891, 3014
BseRI GAGGAG 3 cut(s) 902, 932, 1054
BseSI GKGCMC 1 cut(s) 1019
BseXI GCAGC 3 cut(s) 2150, 2266, 2391
BseYI CCCAGC 1 cut(s) 373
Bsh1285I CGRYCG 1 cut(s) 358
BshNI GGYRCC 2 cut(s) 1298, 1469
BshTI ACCGGT 1 cut(s) 417
BsiEI CGRYCG 1 cut(s) 358
BsiHKAI GWGCWC 5 cut(s) 105, 2356, 2624, 2851, 2866
BsiHKCI CYCGRG 2 cut(s) 1479, 2349
BslFI GGGAC 5 cut(s) 347, 587, 1809, 1969, 2879
BsmAI GTCTC 3 cut(s) 486, 1663, 3054
BsmFI GGGAC 5 cut(s) 347, 587, 1809, 1969, 2879
BsmI GAATGC 1 cut(s) 553
BsoBI CYCGRG 2 cut(s) 1479, 2349
Bsp1286I GDGCHC 6 cut(s) 105, 1019, 2356, 2624, 2851, 2866
Bsp13I TCCGGA 1 cut(s) 150
Bsp1407I TGTACA 1 cut(s) 2394
Bsp19I CCATGG 2 cut(s) 2383, 2722
BspCNI CTCAG 6 cut(s) 208, 342, 1615, 2329, 2755, 3132
BspEI TCCGGA 1 cut(s) 150
BspLI GGNNCC 7 cut(s) 134, 362, 363, 1300, 1471, 2547, 2729
BspMAI CTGCAG 1 cut(s) 2362
BspMI ACCTGC 1 cut(s) 2747
BspPI GGATC 5 cut(s) 127, 140, 411, 427, 933
BspQI GCTCTTC 1 cut(s) 1419
BspT107I GGYRCC 2 cut(s) 1298, 1469
BspTI CTTAAG 1 cut(s) 287
BsrBI CCGCTC 1 cut(s) 148
BsrDI GCAATG 7 cut(s) 247, 387, 610, 1019, 1229, 3063, 3099
BsrFI RCCGGY 4 cut(s) 215, 236, 417, 2963
BsrGI TGTACA 1 cut(s) 2394
BsrI ACTGG 6 cut(s) 310, 730, 964, 2271, 2891, 3014
BssAI RCCGGY 4 cut(s) 215, 236, 417, 2963
BssNI GRCGYC 2 cut(s) 219, 234
BssT1I CCWWGG 5 cut(s) 1384, 2383, 2478, 2549, 2722
Bst2UI CCWGG 6 cut(s) 1308, 1728, 2074, 2130, 2208, 2588
Bst4CI ACNGT 8 cut(s) 691, 1270, 1648, 2304, 2431, 2792, 2801, 2861
Bst6I CTCTTC 5 cut(s) 51, 69, 184, 1327, 1419
BstACI GRCGYC 2 cut(s) 219, 234
BstAFI CTTAAG 1 cut(s) 287
BstAUI TGTACA 1 cut(s) 2394
BstC8I GCNNGC 7 cut(s) 238, 284, 855, 1252, 2091, 2717, 3108
BstDSI CCRYGG 3 cut(s) 209, 2383, 2722
BstEII GGTNACC 1 cut(s) 2855
BstENI CCTNNNNNAGG 1 cut(s) 1383
BstF5I GGATG 7 cut(s) 36, 1634, 1723, 2275, 2509, 2770, 3103
BstHHI GCGC 1 cut(s) 1616
BstMAI GTCTC 3 cut(s) 486, 1663, 3054
BstMCI CGRYCG 1 cut(s) 358
BstMWI GCNNNNNNNGC 9 cut(s) 77, 86, 225, 279, 1747, 2379, 2458, 2822, 2882
BstNI CCWGG 6 cut(s) 1308, 1728, 2074, 2130, 2208, 2588
BstPAI GACNNNNGTC 2 cut(s) 218, 1278
BstPI GGTNACC 1 cut(s) 2855
BstSFI CTRYAG 2 cut(s) 1266, 2358
BstSLI GKGCMC 1 cut(s) 1019
BstV1I GCAGC 3 cut(s) 2150, 2266, 2391
BstV2I GAAGAC 3 cut(s) 1707, 1774, 2786
BstX2I RGATCY 3 cut(s) 132, 403, 925
BstYI RGATCY 3 cut(s) 132, 403, 925
BtgI CCRYGG 3 cut(s) 209, 2383, 2722
BtrI CACGTC 2 cut(s) 1394, 1985
BtsCI GGATG 7 cut(s) 36, 1634, 1723, 2275, 2509, 2770, 3103
BtsIMutI CAGTG 5 cut(s) 303, 687, 957, 1300, 1325
BveI ACCTGC 1 cut(s) 2747
Cac8I GCNNGC 7 cut(s) 238, 284, 855, 1252, 2091, 2717, 3108
CaiI CAGNNNCTG 1 cut(s) 2762
CfoI GCGC 1 cut(s) 1616
Cfr10I RCCGGY 4 cut(s) 215, 236, 417, 2963
CseI GACGC 3 cut(s) 208, 242, 683
Csp6I GTAC 9 cut(s) 397, 1299, 1470, 1582, 2102, 2275, 2395, 2635, 2767
CspAI ACCGGT 1 cut(s) 417
CviAII CATG 7 cut(s) 168, 1495, 1711, 1922, 2384, 2705, 2723
CviQI GTAC 9 cut(s) 397, 1299, 1470, 1582, 2102, 2275, 2395, 2635, 2767
DraI TTTAAA 2 cut(s) 1698, 2838
EaeI YGGCCR 1 cut(s) 2883
Eam1104I CTCTTC 5 cut(s) 51, 69, 184, 1327, 1419
EarI CTCTTC 5 cut(s) 51, 69, 184, 1327, 1419
EciI GGCGGA 4 cut(s) 67, 76, 744, 1404
Ecl136II GAGCTC 3 cut(s) 103, 2354, 2849
Eco130I CCWWGG 5 cut(s) 1384, 2383, 2478, 2549, 2722
Eco147I AGGCCT 2 cut(s) 2715, 3148
Eco24I GRGCYC 3 cut(s) 105, 2356, 2851
Eco47I GGWCC 4 cut(s) 171, 213, 361, 2759
Eco53kI GAGCTC 3 cut(s) 103, 2354, 2849
Eco57I CTGAAG 4 cut(s) 691, 1265, 1758, 1836
Eco88I CYCGRG 2 cut(s) 1479, 2349
Eco91I GGTNACC 1 cut(s) 2855
EcoICRI GAGCTC 3 cut(s) 103, 2354, 2849
EcoNI CCTNNNNNAGG 1 cut(s) 1383
EcoO109I RGGNCCY 3 cut(s) 361, 2546, 2759
EcoO65I GGTNACC 1 cut(s) 2855
EcoRI GAATTC 1 cut(s) 1403
EcoRII CCWGG 6 cut(s) 1306, 1726, 2072, 2128, 2206, 2586
EcoT14I CCWWGG 5 cut(s) 1384, 2383, 2478, 2549, 2722
EcoT38I GRGCYC 3 cut(s) 105, 2356, 2851
ErhI CCWWGG 5 cut(s) 1384, 2383, 2478, 2549, 2722
FaeI CATG 7 cut(s) 171, 1498, 1714, 1925, 2387, 2708, 2726
FalI AAGNNNNNCTT 6 cut(s) 1798, 1830, 2108, 2140, 2550, 2582
FaqI GGGAC 5 cut(s) 347, 587, 1809, 1969, 2879
FatI CATG 7 cut(s) 167, 1494, 1710, 1921, 2383, 2704, 2722
FauI CCCGC 3 cut(s) 153, 372, 494
FauNDI CATATG 2 cut(s) 2248, 2421
FbaI TGATCA 2 cut(s) 2050, 3025
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 6 cut(s) 72, 280, 2139, 2255, 2380, 2883
FokI GGATG 7 cut(s) 23, 1621, 1710, 2282, 2496, 2757, 3110
FriOI GRGCYC 3 cut(s) 105, 2356, 2851
Fsp4HI GCNGC 6 cut(s) 72, 280, 2139, 2255, 2380, 2883
FspBI CTAG 4 cut(s) 1551, 2312, 2369, 2550
GlaI GCGC 1 cut(s) 1615
GluI GCNGC 6 cut(s) 72, 280, 2139, 2255, 2380, 2883
GsaI CCCAGC 1 cut(s) 377
GsuI CTGGAG 3 cut(s) 1404, 2316, 2850
HgaI GACGC 3 cut(s) 208, 242, 683
HhaI GCGC 1 cut(s) 1616
Hin1I GRCGYC 2 cut(s) 219, 234
Hin1II CATG 7 cut(s) 171, 1498, 1714, 1925, 2387, 2708, 2726
Hin6I GCGC 1 cut(s) 1614
HinP1I GCGC 1 cut(s) 1614
HincII GTYRAC 5 cut(s) 1057, 1273, 1335, 2427, 2949
HindII GTYRAC 5 cut(s) 1057, 1273, 1335, 2427, 2949
HindIII AAGCTT 3 cut(s) 1156, 1628, 1702
HpaI GTTAAC 1 cut(s) 2949
HphI GGTGA 8 cut(s) 755, 1094, 1955, 2220, 2271, 2789, 2941, 2978
Hpy166II GTNNAC 9 cut(s) 213, 223, 1057, 1273, 1335, 1565, 2275, 2427, 2949
Hpy8I GTNNAC 9 cut(s) 213, 223, 1057, 1273, 1335, 1565, 2275, 2427, 2949
Hpy99I CGWCG 3 cut(s) 236, 251, 266
HpyCH4III ACNGT 8 cut(s) 691, 1270, 1648, 2304, 2431, 2792, 2801, 2861
HpyCH4IV ACGT 7 cut(s) 576, 1029, 1331, 1393, 1518, 1984, 2013
HpyF10VI GCNNNNNNNGC 9 cut(s) 77, 86, 225, 279, 1747, 2379, 2458, 2822, 2882
HpySE526I ACGT 7 cut(s) 576, 1029, 1331, 1393, 1518, 1984, 2013
Hsp92I GRCGYC 2 cut(s) 219, 234
Hsp92II CATG 7 cut(s) 171, 1498, 1714, 1925, 2387, 2708, 2726
HspAI GCGC 1 cut(s) 1614
KflI GGGWCCC 1 cut(s) 361
Kpn2I TCCGGA 1 cut(s) 150
KpnI GGTACC 2 cut(s) 1302, 1473
KroI GCCGGC 1 cut(s) 236
KroNI GCCGGC 1 cut(s) 238
Ksp22I TGATCA 2 cut(s) 2050, 3025
KspAI GTTAAC 1 cut(s) 2949
LguI GCTCTTC 1 cut(s) 1419
LmnI GCTCC 7 cut(s) 108, 153, 377, 808, 2359, 2846, 2869
Lsp1109I GCAGC 3 cut(s) 2150, 2266, 2391
LweI GCATC 2 cut(s) 2305, 2518
MaeI CTAG 4 cut(s) 1551, 2312, 2369, 2550
MaeII ACGT 7 cut(s) 576, 1029, 1331, 1393, 1518, 1984, 2013
MaeIII GTNAC 8 cut(s) 253, 626, 695, 1490, 1861, 2439, 2855, 2966
MbiI CCGCTC 1 cut(s) 148
MfeI CAATTG 1 cut(s) 1431
MflI RGATCY 3 cut(s) 132, 403, 925
MhlI GDGCHC 6 cut(s) 105, 1019, 2356, 2624, 2851, 2866
MlyI GAGTC 4 cut(s) 89, 170, 1254, 1288
MmeI TCCRAC 2 cut(s) 903, 1837
MroI TCCGGA 1 cut(s) 150
MroNI GCCGGC 1 cut(s) 236
MroXI GAANNNNTTC 2 cut(s) 491, 1771
MslI CAYNNNNRTG 3 cut(s) 1365, 2613, 3121
MspA1I CMGCKG 2 cut(s) 2336, 2816
MspCI CTTAAG 1 cut(s) 287
MunI CAATTG 1 cut(s) 1431
Mva1269I GAATGC 1 cut(s) 553
MvaI CCWGG 6 cut(s) 1308, 1728, 2074, 2130, 2208, 2588
MwoI GCNNNNNNNGC 9 cut(s) 77, 86, 225, 279, 1747, 2379, 2458, 2822, 2882
NaeI GCCGGC 1 cut(s) 238
NciI CCSGG 5 cut(s) 369, 437, 442, 510, 1794
NcoI CCATGG 2 cut(s) 2383, 2722
NdeI CATATG 2 cut(s) 2248, 2421
NgoMIV GCCGGC 1 cut(s) 236
NlaIII CATG 7 cut(s) 171, 1498, 1714, 1925, 2387, 2708, 2726
NlaIV GGNNCC 7 cut(s) 134, 362, 363, 1300, 1471, 2547, 2729
NmeAIII GCCGAG 1 cut(s) 255
NmuCI GTSAC 3 cut(s) 253, 695, 2966
OliI CACNNNNGTG 1 cut(s) 3121
PaeR7I CTCGAG 1 cut(s) 2349
PceI AGGCCT 2 cut(s) 2715, 3148
PciSI GCTCTTC 1 cut(s) 1419
PcsI WCGNNNNNNNCGW 1 cut(s) 824
PctI GAATGC 1 cut(s) 553
PdiI GCCGGC 1 cut(s) 238
PdmI GAANNNNTTC 2 cut(s) 491, 1771
PflFI GACNNNGTC 1 cut(s) 2582
PflMI CCANNNNNTGG 2 cut(s) 1757, 2111
PfoI TCCNGGA 2 cut(s) 1726, 1792
PinAI ACCGGT 1 cut(s) 417
PkrI GCNGC 6 cut(s) 73, 281, 2140, 2256, 2381, 2884
PleI GAGTC 4 cut(s) 89, 170, 1254, 1287
PpsI GAGTC 4 cut(s) 89, 170, 1254, 1287
PpuMI RGGWCCY 2 cut(s) 361, 2759
PshAI GACNNNNGTC 2 cut(s) 218, 1278
Psp124BI GAGCTC 3 cut(s) 105, 2356, 2851
Psp1406I AACGTT 2 cut(s) 1518, 2013
Psp5II RGGWCCY 2 cut(s) 361, 2759
Psp6I CCWGG 6 cut(s) 1306, 1726, 2072, 2128, 2206, 2586
PspEI GGTNACC 1 cut(s) 2855
PspFI CCCAGC 1 cut(s) 373
PspGI CCWGG 6 cut(s) 1306, 1726, 2072, 2128, 2206, 2586
PspN4I GGNNCC 7 cut(s) 134, 362, 363, 1300, 1471, 2547, 2729
PspPPI RGGWCCY 2 cut(s) 361, 2759
PsrI GAACNNNNNNTAC 2 cut(s) 407, 439
PstI CTGCAG 1 cut(s) 2362
PstNI CAGNNNCTG 1 cut(s) 2762
PsuI RGATCY 3 cut(s) 132, 403, 925
PsyI GACNNNGTC 1 cut(s) 2582
PvuII CAGCTG 2 cut(s) 2336, 2816
RsaI GTAC 9 cut(s) 398, 1300, 1471, 1583, 2103, 2276, 2396, 2636, 2768
RsaNI GTAC 9 cut(s) 397, 1299, 1470, 1582, 2102, 2275, 2395, 2635, 2767
RseI CAYNNNNRTG 3 cut(s) 1365, 2613, 3121
SacI GAGCTC 3 cut(s) 105, 2356, 2851
SapI GCTCTTC 1 cut(s) 1419
SatI GCNGC 6 cut(s) 72, 280, 2139, 2255, 2380, 2883
ScaI AGTACT 1 cut(s) 398
SchI GAGTC 4 cut(s) 89, 170, 1254, 1288
SduI GDGCHC 6 cut(s) 105, 1019, 2356, 2624, 2851, 2866
SfaNI GCATC 2 cut(s) 2305, 2518
SfcI CTRYAG 2 cut(s) 1266, 2358
Sfr274I CTCGAG 1 cut(s) 2349
SinI GGWCC 4 cut(s) 171, 213, 361, 2759
SlaI CTCGAG 1 cut(s) 2349
SmiMI CAYNNNNRTG 3 cut(s) 1365, 2613, 3121
SmlI CTYRAG 6 cut(s) 287, 392, 536, 1060, 1276, 2349
SmoI CTYRAG 6 cut(s) 287, 392, 536, 1060, 1276, 2349
SseBI AGGCCT 2 cut(s) 2715, 3148
SspMI CTAG 4 cut(s) 1551, 2312, 2369, 2550
SstI GAGCTC 3 cut(s) 105, 2356, 2851
StuI AGGCCT 2 cut(s) 2715, 3148
StyI CCWWGG 5 cut(s) 1384, 2383, 2478, 2549, 2722
TaaI ACNGT 8 cut(s) 691, 1270, 1648, 2304, 2431, 2792, 2801, 2861
TaiI ACGT 7 cut(s) 579, 1032, 1334, 1396, 1521, 1987, 2016
TaqII GACCGA 2 cut(s) 155, 188
TatI WGTACW 3 cut(s) 396, 2274, 2394
TauI GCSGC 3 cut(s) 74, 282, 2885
TscAI CASTG 5 cut(s) 310, 694, 964, 1300, 1332
TseFI GTSAC 3 cut(s) 253, 695, 2966
TseI GCWGC 3 cut(s) 2138, 2254, 2379
Tsp45I GTSAC 3 cut(s) 253, 695, 2966
TspGWI ACGGA 2 cut(s) 6, 198
TspRI CASTG 5 cut(s) 310, 694, 964, 1300, 1332
Tth111I GACNNNGTC 1 cut(s) 2582
Van91I CCANNNNNTGG 2 cut(s) 1757, 2111
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 4 cut(s) 171, 213, 361, 2759
XagI CCTNNNNNAGG 1 cut(s) 1383
XapI RAATTY 6 cut(s) 835, 1403, 1604, 1693, 1999, 2870
XcmI CCANNNNNNNNNTGG 1 cut(s) 1492
XhoI CTCGAG 1 cut(s) 2349
XmaJI CCTAGG 1 cut(s) 2549
XmiI GTMKAC 1 cut(s) 222
XmnI GAANNNNTTC 2 cut(s) 491, 1771
XspI CTAG 4 cut(s) 1551, 2312, 2369, 2550
ZrmI AGTACT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.