Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0011488

Physical Location & Seq

Genomic Coordinates Reverse (-)

16016775 .. 16021577

Gene Structure 4803 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g24150.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGAAAGGCGGCACAGTCCAGATCAACTGGCACGACTCCAAGCCCGTCCTAACCCTAGATTTCCACCCCAATTCCGCCACTCTCGCCACCGGCGGCGCCGATTACGACATCAAGCTTTGGTTGATAAGTTCCGGGGAAAAGCTCCCATCGGTGTCGTATCATAATAGCCTTTCGTACCATAGTTCCGCTGTTAATGTCCTCCGGTTTGCTCCTTCTGGAGAACTACTTGCCTCTGGTGCAGATGGAGGTGAGCTGATTATATGGAAGTTGCATGCAACAGAAAATGGTCAAACGTGGAAGGTCCTTAAGACATTATCATTTCACCGGAAAGACGTGTTGGACCTCGAGTGGTCTACTGATGGTTTATTTCTCATCTCCGGTTCAGTTGATAATTCATGCATCATATGGGATGTTAACAAAGGTTCAGTCCATCAGATTTTGGATTCCCATTTCCATTATGTTCAAGGTGTGGCATGGGACCCATTAGCCAAGTATGTTGCCTCCCTCAGTTCAGATAGAACTTGTCGCATTTACCTTAAAAAAGCTCAAACAAAGACCAAAGGCACCGATAAGACAAATTATATATGTCAACATGTTATATCAAAGGCCGAAAACCCATCATCAGATGATTCCAAGTCTGCAAAAAACCATCTCTTTCACGATGAGACACTGCCATCTTTTTTCCGGAGATTAGCATGGTCACCTGATGGATCATTTCTACTTGTTCCAGCAGGTTCGTACAAAGTATCACCTGCAACAGAAACAATAAATACTGCTTATGTATTTTCAAGAAAGGACCTTTCAAGGCCTGCTTTACACCTCCCTTGTGCCAACAAAGCAATAGTAGCAGTTCGATTCTGCCCTTTGACTTTTAGACTGCGGGAAACAAATCCATCGGGATTCTTTAAGCTTCCCCATCGTATAGTTTTTGCGGTGGCCACTTTGGATTCTCTTTACATTTATGACACACAGAGTGTTGCTCCAATTGCAATTTTGGCTGGTCTTCATTATGCAGCCATAACAGACATTACATGGTCACCTGATGCCCGTTTTCTAGCACTTTCTTCCCAAGATGGTTACTGCACTATAGTGGAATTTGAAAATGATGAACTGGGATCACCCACAGAAGAGAAAGTCTTTGGTGAAGAGGAGGAAAGCTCGGTAAAGAAACCAGAGGGCATGTTAATTGAAACTACTACAGAAAATAGTCTTGTTGCAACTAAAGTCAATAATGAAGAGAACAAAATCTCAGTTAAGAAGCCAGAGGATAAGGTAATTGACACTGCTCCAAATAAAAGTCTTGTTGCAGTGGAAAATGAAATAACAGAAGCAGAAAGAAATAAGCAAACAGGAGCAGAAAAGGAAGTAATTGGTGATGACAGAAGCACTGCTGAGAAGCCAGAGGACATGGTAATTGACACTGCCTCAAACGATAGTCTTGCAGCCAATATTGAAATATCAGAAGCAGAAGCGAGTGAAAAGAAAGTCTTGGGAGATGACAGTAGTACAGTTCAGAAGCCAGAGGACATGGTAACTGAAACTTCAGCAAATGATAGTCTTGTAGAACTAAACGACAGCAAAAAAGAATCATCAAGCACAGTGACAACGCCTACTGTAAATAAGCCTACTAAAAGGCGCATTACACCCATGGCTATTGACCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0031497 GO:0032991 GO:0033186 GO:0034622 GO:0034728 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0051276 GO:0065003 GO:0065004 GO:0071103 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

555

Amino Acids

60.9

Weight (kDa)

5.27

Isoelectric Point (pI)

43.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_CAF1B_HIR1	PF24105	1 - 371	2.6e-122	CAF1B/HIR1 beta-propeller domain
Beta-prop_IFT140_1st	PF23383	5 - 146	3e-09	IFT140 first beta-propeller
Beta-prop_Aladin	PF25460	9 - 182	4.8e-08	Aladin seven-bladed propeller
Beta-prop_WDR3_1st	PF25173	11 - 92	9.7e-11	WDR3 first beta-propeller domain
WD40_CDC20-Fz	PF24807	11 - 204	1.1e-19	CDC20/Fizzy WD40 domain
Beta-prop_EML	PF23409	12 - 145	9.3e-09	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR5	PF25175	13 - 185	7.7e-29	WDR5 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	13 - 197	1.4e-12	TEP-1 second beta-propeller
WD40_WDHD1_1st	PF24817	13 - 144	7.2e-14	WDHD1 first WD40 domain
WD40_Prp19	PF24814	13 - 100	3e-08	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	13 - 100	2.8e-09	THOC3 beta-propeller domain
Beta-prop_WDR3_2nd	PF25172	14 - 137	3.2e-10	WDR3 second beta-propeller domain
WD40_Gbeta	PF25391	15 - 197	7.5e-13	G protein beta WD-40 repeat protein
Beta-prop_EML_2	PF23414	18 - 182	1.9e-14	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	26 - 143	6.4e-08	WDR36/Utp21 second beta-propeller domain
EIF3I	PF24805	57 - 193	8e-07	EIF3I
WD40_MABP1-WDR62_2nd	PF24782	61 - 201	2.4e-07	MABP1/WDR62 second WD40 domain
WDR55	PF24796	62 - 148	1.4e-08	WDR55
Beta-prop_IFT122_1st	PF23381	63 - 191	6.3e-06	IFT122 first beta-propeller
ANAPC4_WD40	PF12894	68 - 159	6.1e-06	Anaphase-promoting complex subunit 4 WD40 domain
WD40_Prp19	PF24814	98 - 183	4.3e-11	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	98 - 186	2.7e-12	WDR3 first beta-propeller domain
WD40	PF00400	99 - 137	1e-07	WD domain, G-beta repeat
WD40_MABP1-WDR62_1st	PF24780	103 - 178	8.1e-06	MABP1/WDR62 first WD40 domain
Beta-prop_THOC3	PF25174	108 - 249	5.3e-14	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64630 AT5G64630 AT5G64630
fragaria_vesca	FvH4_1g24150 FvH4_1g24150 FvH4_1g24150 FvH4_1g24150
malus_domestica	MD01G1002400.v1.1
prunus_persica	Prupe.6G159400_v2.0.a1
pyrus_communis	pycom01g02500
rosa_chinensis	RchiOBHm_Chr2g0120381
rosa_laevigata	RLG00000018554
rosa_multiflora	Rmu_sc0005082.1_g000015
rosa_roxburghii	Rroxscaffold_2G00123450
rosa_rugosa	Rorug02G0229200
rosa_samantha	Rh2AG285200 Rh2BG296300 Rh2CG274000 Rh2DG310200
rosa_wichuraiana	Rw2G022890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	760
Acc36I	ACCTGC	2 cut(s)	722, 760
AccB1I	GGYRCC	2 cut(s)	95, 563
AccI	GTMKAC	1 cut(s)	353
AccIII	TCCGGA	1 cut(s)	684
AciI	CCGC	6 cut(s)	9, 75, 93, 186, 880, 932
AclWI	GGATC	2 cut(s)	718, 1123
AcoI	YGGCCR	1 cut(s)	936
AcsI	RAATTY	1 cut(s)	1094
AcuI	CTGAAG	1 cut(s)	1527
AcyI	GRCGYC	1 cut(s)	96
AdeI	CACNNNGTG	1 cut(s)	974
AfaI	GTAC	3 cut(s)	176, 740, 1507
AflII	CTTAAG	1 cut(s)	305
AflIII	ACRYGT	2 cut(s)	333, 592
AgsI	TTSAA	6 cut(s)	464, 789, 804, 1100, 1190, 1454
AjiI	CACGTC	1 cut(s)	334
AjuI	GAANNNNNNNTTGG	2 cut(s)	320, 352
AleI	CACNNNNGTG	1 cut(s)	1088
AluBI	AGCT	6 cut(s)	115, 142, 253, 545, 910, 1158
AluI	AGCT	6 cut(s)	115, 142, 253, 545, 910, 1158
Alw26I	GTCTC	1 cut(s)	659
AlwI	GGATC	2 cut(s)	718, 1123
Ama87I	CYCGRG	1 cut(s)	344
Aor13HI	TCCGGA	1 cut(s)	684
AoxI	GGCC	3 cut(s)	606, 806, 936
ApeKI	GCWGC	2 cut(s)	1013, 1442
ApoI	RAATTY	1 cut(s)	1094
ArsI	GACNNNNNNTTYG	2 cut(s)	411, 443
AspLEI	GCGC	2 cut(s)	98, 1638
AspS9I	GGNCC	4 cut(s)	301, 340, 478, 796
AsuC2I	CCSGG	1 cut(s)	133
AsuHPI	GGTGA	8 cut(s)	260, 314, 693, 741, 1029, 1110, 1154, 1385
AvaI	CYCGRG	1 cut(s)	344
AvaII	GGWCC	4 cut(s)	301, 340, 478, 796
BalI	TGGCCA	1 cut(s)	938
BanI	GGYRCC	2 cut(s)	95, 563
BbsI	GAAGAC	1 cut(s)	995
BbvI	GCAGC	2 cut(s)	1025, 1454
BcgI	CGANNNNNNTGC	2 cut(s)	1421, 1455
BcnI	CCSGG	1 cut(s)	133
BcoDI	GTCTC	1 cut(s)	659
BfaI	CTAG	2 cut(s)	56, 1055
BfmI	CTRYAG	2 cut(s)	1086, 1197
BfoI	RGCGCY	1 cut(s)	99
BfrI	CTTAAG	1 cut(s)	305
BfuAI	ACCTGC	2 cut(s)	722, 760
BisI	GCNGC	4 cut(s)	10, 94, 1014, 1443
BlsI	GCNGC	4 cut(s)	11, 95, 1015, 1444
Bme1390I	CCNGG	1 cut(s)	133
Bme18I	GGWCC	4 cut(s)	301, 340, 478, 796
BmeT110I	CYCGRG	1 cut(s)	344
BmgBI	CACGTC	1 cut(s)	334
BmgT120I	GGNCC	4 cut(s)	301, 340, 478, 796
BmiI	GGNNCC	4 cut(s)	97, 479, 480, 565
BmrFI	CCNGG	1 cut(s)	133
BmrI	ACTGGG	1 cut(s)	1121
BmsI	GCATC	2 cut(s)	408, 1033
BmuI	ACTGGG	1 cut(s)	1121
BpiI	GAAGAC	1 cut(s)	995
BplI	GAGNNNNNCTC	4 cut(s)	964, 996, 1142, 1174
BpmI	CTGGAG	1 cut(s)	237
BpuMI	CCSGG	1 cut(s)	133
BsaHI	GRCGYC	1 cut(s)	96
BsaJI	CCNNGG	2 cut(s)	132, 1647
BsaWI	WCCGGW	4 cut(s)	201, 324, 377, 684
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	2 cut(s)	32, 1116
BseAI	TCCGGA	1 cut(s)	684
BseDI	CCNNGG	2 cut(s)	132, 1647
BseGI	GGATG	1 cut(s)	415
BseMII	CTCAG	3 cut(s)	520, 1263, 1383
BseNI	ACTGG	2 cut(s)	32, 1116
BseRI	GAGGAG	1 cut(s)	1163
BseXI	GCAGC	2 cut(s)	1025, 1454
BsgI	GTGCAG	2 cut(s)	258, 1066
BshFI	GGCC	3 cut(s)	608, 808, 938
BshNI	GGYRCC	2 cut(s)	95, 563
BsiHKCI	CYCGRG	1 cut(s)	344
BsiSI	CCGG	6 cut(s)	90, 132, 202, 325, 378, 685
BslFI	GGGAC	1 cut(s)	491
BsmAI	GTCTC	1 cut(s)	659
BsmFI	GGGAC	1 cut(s)	491
BsnI	GGCC	3 cut(s)	608, 808, 938
BsoBI	CYCGRG	1 cut(s)	344
Bsp13I	TCCGGA	1 cut(s)	684
Bsp143I	GATC	3 cut(s)	21, 710, 1115
Bsp19I	CCATGG	1 cut(s)	1647
BspACI	CCGC	6 cut(s)	9, 75, 93, 186, 880, 932
BspANI	GGCC	3 cut(s)	608, 808, 938
BspCNI	CTCAG	3 cut(s)	519, 1262, 1384
BspEI	TCCGGA	1 cut(s)	684
BspLI	GGNNCC	4 cut(s)	97, 479, 480, 565
BspMI	ACCTGC	2 cut(s)	722, 760
BspPI	GGATC	2 cut(s)	718, 1123
BspT107I	GGYRCC	2 cut(s)	95, 563
BspTI	CTTAAG	1 cut(s)	305
BsrFI	RCCGGY	1 cut(s)	89
BsrI	ACTGG	2 cut(s)	32, 1116
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	2 cut(s)	132, 1647
BssMI	GATC	3 cut(s)	21, 710, 1115
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	1 cut(s)	1647
Bst4CI	ACNGT	5 cut(s)	16, 1502, 1510, 1600, 1615
Bst6I	CTCTTC	3 cut(s)	1122, 1140, 1230
BstACI	GRCGYC	1 cut(s)	96
BstAFI	CTTAAG	1 cut(s)	305
BstC8I	GCNNGC	2 cut(s)	273, 810
BstDEI	CTNAG	3 cut(s)	506, 1249, 1392
BstDSI	CCRYGG	1 cut(s)	1647
BstEII	GGTNACC	2 cut(s)	699, 1035
BstF5I	GGATG	1 cut(s)	415
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	2 cut(s)	98, 1638
BstKTI	GATC	3 cut(s)	24, 713, 1118
BstMAI	GTCTC	1 cut(s)	659
BstMBI	GATC	3 cut(s)	21, 710, 1115
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 236, 836, 845, 986, 995
BstNSI	RCATGY	3 cut(s)	275, 596, 1183
BstPI	GGTNACC	2 cut(s)	699, 1035
BstSCI	CCNGG	1 cut(s)	131
BstSFI	CTRYAG	2 cut(s)	1086, 1197
BstV1I	GCAGC	2 cut(s)	1025, 1454
BstV2I	GAAGAC	1 cut(s)	995
BsuRI	GGCC	3 cut(s)	608, 808, 938
BtgI	CCRYGG	1 cut(s)	1647
BtrI	CACGTC	1 cut(s)	334
BtsCI	GGATG	1 cut(s)	415
BtsI	GCAGTG	5 cut(s)	668, 1281, 1314, 1386, 1419
BtsIMutI	CAGTG	6 cut(s)	668, 1281, 1314, 1386, 1419, 1605
BveI	ACCTGC	2 cut(s)	722, 760
Cac8I	GCNNGC	2 cut(s)	273, 810
CfoI	GCGC	2 cut(s)	98, 1638
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	4 cut(s)	301, 340, 478, 796
Csp6I	GTAC	3 cut(s)	175, 739, 1506
CviQI	GTAC	3 cut(s)	175, 739, 1506
DdeI	CTNAG	3 cut(s)	506, 1249, 1392
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	3 cut(s)	23, 712, 1117
DpnII	GATC	3 cut(s)	21, 710, 1115
DraIII	CACNNNGTG	1 cut(s)	974
EaeI	YGGCCR	1 cut(s)	936
Eam1104I	CTCTTC	3 cut(s)	1122, 1140, 1230
EarI	CTCTTC	3 cut(s)	1122, 1140, 1230
EciI	GGCGGA	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	1647
Eco147I	AGGCCT	1 cut(s)	808
Eco47I	GGWCC	4 cut(s)	301, 340, 478, 796
Eco57I	CTGAAG	1 cut(s)	1527
Eco88I	CYCGRG	1 cut(s)	344
Eco91I	GGTNACC	2 cut(s)	699, 1035
EcoO109I	RGGNCCY	3 cut(s)	301, 478, 796
EcoO65I	GGTNACC	2 cut(s)	699, 1035
EcoT14I	CCWWGG	1 cut(s)	1647
EcoT22I	ATGCAT	1 cut(s)	401
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	1 cut(s)	1647
FalI	AAGNNNNNCTT	4 cut(s)	796, 828, 1472, 1504
FaqI	GGGAC	1 cut(s)	491
FauI	CCCGC	1 cut(s)	873
FauNDI	CATATG	1 cut(s)	404
FblI	GTMKAC	1 cut(s)	353
Fnu4HI	GCNGC	4 cut(s)	10, 94, 1014, 1443
FokI	GGATG	1 cut(s)	422
Fsp4HI	GCNGC	4 cut(s)	10, 94, 1014, 1443
FspBI	CTAG	2 cut(s)	56, 1055
GlaI	GCGC	2 cut(s)	97, 1637
GluI	GCNGC	4 cut(s)	10, 94, 1014, 1443
GsuI	CTGGAG	1 cut(s)	237
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	3 cut(s)	608, 808, 938
HapII	CCGG	6 cut(s)	90, 132, 202, 325, 378, 685
HhaI	GCGC	2 cut(s)	98, 1638
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	2 cut(s)	96, 1636
HinP1I	GCGC	2 cut(s)	96, 1636
HincII	GTYRAC	2 cut(s)	415, 590
HindII	GTYRAC	2 cut(s)	415, 590
HindIII	AAGCTT	2 cut(s)	113, 908
HinfI	GANTC	7 cut(s)	35, 443, 629, 855, 900, 947, 1586
HpaI	GTTAAC	1 cut(s)	415
HpaII	CCGG	6 cut(s)	90, 132, 202, 325, 378, 685
HphI	GGTGA	8 cut(s)	260, 314, 693, 741, 1029, 1110, 1154, 1385
Hpy166II	GTNNAC	3 cut(s)	354, 415, 590
Hpy188I	TCNGA	5 cut(s)	435, 514, 625, 1462, 1515
Hpy188III	TCNNGA	6 cut(s)	19, 216, 659, 685, 789, 897
Hpy8I	GTNNAC	3 cut(s)	354, 415, 590
HpyAV	CCTTC	2 cut(s)	222, 292
HpyCH4III	ACNGT	5 cut(s)	16, 1502, 1510, 1600, 1615
HpyCH4IV	ACGT	2 cut(s)	293, 333
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 236, 836, 845, 986, 995
HpyF3I	CTNAG	3 cut(s)	506, 1249, 1392
HpySE526I	ACGT	2 cut(s)	293, 333
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	2 cut(s)	96, 1636
KasI	GGCGCC	1 cut(s)	95
KflI	GGGWCCC	1 cut(s)	478
Kpn2I	TCCGGA	1 cut(s)	684
KspAI	GTTAAC	1 cut(s)	415
Kzo9I	GATC	3 cut(s)	21, 710, 1115
LmnI	GCTCC	5 cut(s)	147, 214, 985, 1291, 1352
Lsp1109I	GCAGC	2 cut(s)	1025, 1454
LweI	GCATC	2 cut(s)	408, 1033
MaeI	CTAG	2 cut(s)	56, 1055
MaeII	ACGT	2 cut(s)	293, 333
MaeIII	GTNAC	5 cut(s)	699, 1035, 1076, 1531, 1600
MalI	GATC	3 cut(s)	23, 712, 1117
MboI	GATC	3 cut(s)	21, 710, 1115
MboII	GAAGA	5 cut(s)	995, 1056, 1139, 1157, 1247
MfeI	CAATTG	1 cut(s)	984
MlsI	TGGCCA	1 cut(s)	938
MluNI	TGGCCA	1 cut(s)	938
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	1 cut(s)	29
MmeI	TCCRAC	1 cut(s)	318
Mox20I	TGGCCA	1 cut(s)	938
Mph1103I	ATGCAT	1 cut(s)	401
MroI	TCCGGA	1 cut(s)	684
MscI	TGGCCA	1 cut(s)	938
MseI	TTAA	7 cut(s)	192, 306, 414, 537, 906, 1184, 1254
MslI	CAYNNNNRTG	1 cut(s)	1088
Msp20I	TGGCCA	1 cut(s)	938
MspA1I	CMGCKG	1 cut(s)	188
MspCI	CTTAAG	1 cut(s)	305
MspI	CCGG	6 cut(s)	90, 132, 202, 325, 378, 685
MspR9I	CCNGG	1 cut(s)	133
MunI	CAATTG	1 cut(s)	984
MwoI	GCNNNNNNNGC	6 cut(s)	83, 236, 836, 845, 986, 995
NarI	GGCGCC	1 cut(s)	96
NciI	CCSGG	1 cut(s)	133
NcoI	CCATGG	1 cut(s)	1647
NdeI	CATATG	1 cut(s)	404
NdeII	GATC	3 cut(s)	21, 710, 1115
NlaIV	GGNNCC	4 cut(s)	97, 479, 480, 565
NmuCI	GTSAC	3 cut(s)	699, 1035, 1600
NsiI	ATGCAT	1 cut(s)	401
NspI	RCATGY	3 cut(s)	275, 596, 1183
OliI	CACNNNNGTG	1 cut(s)	1088
PaeI	GCATGC	1 cut(s)	275
PaeR7I	CTCGAG	1 cut(s)	344
PaqCI	CACCTGC	1 cut(s)	760
PceI	AGGCCT	1 cut(s)	808
PciI	ACATGT	1 cut(s)	592
PfeI	GAWTC	6 cut(s)	443, 629, 855, 900, 947, 1586
PkrI	GCNGC	4 cut(s)	11, 95, 1015, 1444
PleI	GAGTC	1 cut(s)	29
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	1 cut(s)	29
PpuMI	RGGWCCY	3 cut(s)	301, 478, 796
PscI	ACATGT	1 cut(s)	592
Psp5II	RGGWCCY	3 cut(s)	301, 478, 796
PspEI	GGTNACC	2 cut(s)	699, 1035
PspN4I	GGNNCC	4 cut(s)	97, 479, 480, 565
PspPI	GGNCC	4 cut(s)	301, 340, 478, 796
PspPPI	RGGWCCY	3 cut(s)	301, 478, 796
PspXI	VCTCGAGB	1 cut(s)	344
RsaI	GTAC	3 cut(s)	176, 740, 1507
RsaNI	GTAC	3 cut(s)	175, 739, 1506
RseI	CAYNNNNRTG	1 cut(s)	1088
SaqAI	TTAA	7 cut(s)	192, 306, 414, 537, 906, 1184, 1254
SatI	GCNGC	4 cut(s)	10, 94, 1014, 1443
Sau3AI	GATC	3 cut(s)	21, 710, 1115
Sau96I	GGNCC	4 cut(s)	301, 340, 478, 796
SchI	GAGTC	1 cut(s)	29
ScrFI	CCNGG	1 cut(s)	133
SfaNI	GCATC	2 cut(s)	408, 1033
SfcI	CTRYAG	2 cut(s)	1086, 1197
SfoI	GGCGCC	1 cut(s)	97
Sfr274I	CTCGAG	1 cut(s)	344
SgrAI	CRCCGGYG	1 cut(s)	89
SinI	GGWCC	4 cut(s)	301, 340, 478, 796
SlaI	CTCGAG	1 cut(s)	344
SmiMI	CAYNNNNRTG	1 cut(s)	1088
SmlI	CTYRAG	2 cut(s)	305, 344
SmoI	CTYRAG	2 cut(s)	305, 344
SphI	GCATGC	1 cut(s)	275
SseBI	AGGCCT	1 cut(s)	808
SsiI	CCGC	6 cut(s)	9, 75, 93, 186, 880, 932
SspDI	GGCGCC	1 cut(s)	95
SspI	AATATT	1 cut(s)	1450
SspMI	CTAG	2 cut(s)	56, 1055
StuI	AGGCCT	1 cut(s)	808
StyD4I	CCNGG	1 cut(s)	131
StyI	CCWWGG	1 cut(s)	1647
TaaI	ACNGT	5 cut(s)	16, 1502, 1510, 1600, 1615
TaiI	ACGT	2 cut(s)	296, 336
TaqI	TCGA	2 cut(s)	345, 853
TatI	WGTACW	1 cut(s)	1505
TauI	GCSGC	2 cut(s)	12, 96
TfiI	GAWTC	6 cut(s)	443, 629, 855, 900, 947, 1586
Tru1I	TTAA	7 cut(s)	192, 306, 414, 537, 906, 1184, 1254
Tru9I	TTAA	7 cut(s)	192, 306, 414, 537, 906, 1184, 1254
TscAI	CASTG	6 cut(s)	675, 1288, 1314, 1393, 1426, 1605
TseFI	GTSAC	3 cut(s)	699, 1035, 1600
TseI	GCWGC	2 cut(s)	1013, 1442
Tsp45I	GTSAC	3 cut(s)	699, 1035, 1600
TspDTI	ATGAA	6 cut(s)	17, 384, 995, 1122, 1248, 1332
TspRI	CASTG	6 cut(s)	675, 1288, 1314, 1393, 1426, 1605
Vha464I	CTTAAG	1 cut(s)	305
VpaK11BI	GGWCC	4 cut(s)	301, 340, 478, 796
XapI	RAATTY	1 cut(s)	1094
XceI	RCATGY	3 cut(s)	275, 596, 1183
XhoI	CTCGAG	1 cut(s)	344
XmiI	GTMKAC	1 cut(s)	353
XspI	CTAG	2 cut(s)	56, 1055
Zsp2I	ATGCAT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.