Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011488

Physical Location & Seq

Genomic Coordinates Forward (+)

57297642 .. 57303368

Gene Structure 5727 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00123450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGAAAGGCGGGACGGTCCAGATCAACTGGCACGACACCAAGCCCGTCCTAACTCTAGATTTCCACCCTCATTCCGGCATTCTCGCCACCGGCGGCGCCGATTACGACATCAAGCTTTGGTTGATAAATTCCGGCGAGAAGCTCCCTTCAGTGTCGTATCATAATAGCCTTTCTTACCATAGTTCTGCTATAAATGTCCTTCGCTTCTCCCCTTCTGGAGAACAAATTGCCTCTGGTGCAGATGGAGGCGAGCTGATTATATGGAAGTTGCATGCAACAGAAAATAGTCAAACGTGGAAGGTTCTTAAGACATTGTCATTTCACCGGAAAGACGTGCTGGACCTCGAGTGGTCTACTGATGGTTCATTTCTCATCTCCGGTTCAGTCGATAATTCATGCATCATATGGGATGCTAACAAAGGTTCTGTCCATCAGATTTTGGATTCCCATTTCCATTATGTTCAAGGTGTGGCATGGGACCCATTGGCCAAGTATGTTGCCTCCCTCAGTTCAGATAGAACTTGTCGCATTTATCTTAAAAAAGCTCAAACAAAAACCAAGGGTGCTGATAAGACAAATTATGTTTGTCAACATGTTATTTCGAAGGCCGAAAACCCTTCAGATGAGTCTAAGTCTGCGAAAAACCATCTCTTTCACGATGAGACACTGCCATCTTTTTTCCGGAGGTTAGCGTGGTCACCTGATGGATCATTTCTACTTGTTCCAGCAGGTTCCTACAAAGTATCACCTGCAACAGAAACAATAAATACTGCTTATGTATTTTCAAGAAAGGACCTTTCAAGGCCTGCTCTACATCTCCCTTGCGCCAGCAAACCAATAGTAGCAGTTCGATTCTGCCCTTTGGCTTTTAGACTGCGGGGAACCAATCCATCGGGGTTCTTTAAGCTTCCCCATCGTATAGTTTTTGCGGTGGCCACTTTAGATTCTCTGAACATTTATGACACAGAGAGTGTTACTCCAATTGCAGTTTTGGCTGGTCTTCATTATGCAGCCATAACAGACATCACATGGTCACCTGATGCCCATTATCTAGCATTATCTTCCCAAGATGGTTACTGCACTTTAGTAGAATTTGAAAATGATGAACTGGGATCACCCATCTATTTGTCAGAAGAGAAGAAAGTCATTGGTGAAGAGCACGAAAGCTTGGTAAAGAAACCAGAGGGCATGTTAATTGAAGCTACTACAGAAAATAGTCTTGCTGCAACTAAAGCCATTAAGAAGCCAGACGACATGGTAACTGACACTACTCCAAGTAAAAGTCTTGTTGCAGCCGATAATGAAATATCAGAAGCAGACAGGAATAAGCAAACAGAAGCAGAAAAGAAAGTCATAGGTGATGACAAAAGCAGAGTTCAGAAGCCAGAGGACATGGTAATTGATGCTGCCACAAATGATAGTCTTGCAGCCGATATTGAAATATCAGAAGCAGAAAGGAAAGAAAAGAAAGTTATGGGTGATGACAGTAGCACAGTTCAGAAGCCAGAGGACATGGTAATTGAAGCTTCAGCAAATAATAGTCTTGTAGCAGCAAACGATGGCAAAAAAGAATCACCGAGCACAGTGACAACTCCTACTGTAAATAAGCCTACTAAAAGGCGCATTACACCCATGGCAATTGACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0022607 GO:0031497 GO:0032991 GO:0033186 GO:0034622 GO:0034728 GO:0042393 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0051276 GO:0065003 GO:0065004 GO:0071103 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

549

Amino Acids

60.26

Weight (kDa)

5.79

Isoelectric Point (pI)

38.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_CAF1B_HIR1	PF24105	1 - 370	3e-117	CAF1B/HIR1 beta-propeller domain
Beta-prop_Aladin	PF25460	9 - 181	3.3e-08	Aladin seven-bladed propeller
Beta-prop_WDR3_1st	PF25173	11 - 93	7.7e-10	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	12 - 101	1.3e-09	THOC3 beta-propeller domain
Beta-prop_EML	PF23409	12 - 145	8.7e-09	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR5	PF25175	13 - 184	4.1e-28	WDR5 beta-propeller domain
Beta-prop_IFT140_1st	PF23383	13 - 93	4e-07	IFT140 first beta-propeller
WD40_Prp19	PF24814	13 - 100	1.8e-09	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	13 - 187	2.6e-12	TEP-1 second beta-propeller
WD40_WDHD1_1st	PF24817	13 - 144	5e-13	WDHD1 first WD40 domain
Beta-prop_WDR3_2nd	PF25172	14 - 132	9.4e-10	WDR3 second beta-propeller domain
EIF3I	PF24805	16 - 184	2.3e-11	EIF3I
Beta-prop_EML_2	PF23414	18 - 185	8.3e-15	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR75_1st	PF23869	19 - 95	8.6e-06	WD repeat-containing protein 75 first beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	27 - 181	2e-07	WDR36/Utp21 second beta-propeller domain
WD40_MABP1-WDR62_2nd	PF24782	61 - 201	6.3e-08	MABP1/WDR62 second WD40 domain
WDR55	PF24796	62 - 148	1.2e-08	WDR55
Beta-prop_IFT122_1st	PF23381	63 - 191	1.6e-06	IFT122 first beta-propeller
WD40_CDC20-Fz	PF24807	96 - 203	5.3e-12	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	97 - 184	6.1e-12	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	97 - 195	5.5e-12	WDR3 first beta-propeller domain
WD40	PF00400	99 - 137	4.2e-08	WD domain, G-beta repeat
WD40_Gbeta	PF25391	103 - 187	9.9e-08	G protein beta WD-40 repeat protein
Beta-prop_THOC3	PF25174	108 - 192	9.8e-14	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0011488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64630 AT5G64630 AT5G64630
fragaria_vesca	FvH4_1g24150 FvH4_1g24150 FvH4_1g24150 FvH4_1g24150
malus_domestica	MD01G1002400.v1.1
prunus_persica	Prupe.6G159400_v2.0.a1
pyrus_communis	pycom01g02500
rosa_chinensis	RchiOBHm_Chr2g0120381
rosa_laevigata	RLG00000018554
rosa_multiflora	Rmu_sc0005082.1_g000015
rosa_roxburghii	Rroxscaffold_2G00123450
rosa_rugosa	Rorug02G0229200
rosa_samantha	Rh2AG285200 Rh2BG296300 Rh2CG274000 Rh2DG310200
rosa_wichuraiana	Rw2G022890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	757
Acc36I	ACCTGC	2 cut(s)	719, 757
AccB1I	GGYRCC	1 cut(s)	95
AccI	GTMKAC	1 cut(s)	353
AccIII	TCCGGA	1 cut(s)	681
AciI	CCGC	4 cut(s)	9, 93, 877, 929
AclWI	GGATC	2 cut(s)	715, 1120
AcoI	YGGCCR	2 cut(s)	486, 933
AcsI	RAATTY	2 cut(s)	127, 1091
AcuI	CTGAAG	3 cut(s)	132, 603, 1512
AcyI	GRCGYC	1 cut(s)	96
AfiI	CCNNNNNNNGG	1 cut(s)	74
AflII	CTTAAG	1 cut(s)	305
AflIII	ACRYGT	1 cut(s)	592
AgsI	TTSAA	7 cut(s)	464, 786, 801, 1097, 1199, 1439, 1523
AjiI	CACGTC	1 cut(s)	334
AluBI	AGCT	8 cut(s)	115, 142, 253, 545, 907, 1167, 1202, 1526
AluI	AGCT	8 cut(s)	115, 142, 253, 545, 907, 1167, 1202, 1526
Alw21I	GWGCWC	2 cut(s)	1161, 1583
Alw26I	GTCTC	1 cut(s)	656
AlwI	GGATC	2 cut(s)	715, 1120
Ama87I	CYCGRG	1 cut(s)	344
Aor13HI	TCCGGA	1 cut(s)	681
AoxI	GGCC	4 cut(s)	486, 606, 803, 933
ApeKI	GCWGC	6 cut(s)	1010, 1223, 1292, 1406, 1427, 1550
ApoI	RAATTY	2 cut(s)	127, 1091
ArsI	GACNNNNNNTTYG	2 cut(s)	411, 443
AspLEI	GCGC	3 cut(s)	98, 827, 1623
AspS9I	GGNCC	4 cut(s)	16, 340, 478, 793
AsuHPI	GGTGA	9 cut(s)	314, 690, 738, 1026, 1107, 1163, 1370, 1490, 1566
AsuII	TTCGAA	1 cut(s)	602
AvaI	CYCGRG	1 cut(s)	344
AvaII	GGWCC	4 cut(s)	16, 340, 478, 793
BalI	TGGCCA	2 cut(s)	488, 935
BanI	GGYRCC	1 cut(s)	95
BbsI	GAAGAC	1 cut(s)	992
Bbv12I	GWGCWC	2 cut(s)	1161, 1583
BbvI	GCAGC	6 cut(s)	1022, 1210, 1304, 1393, 1439, 1562
BcoDI	GTCTC	1 cut(s)	656
BfaI	CTAG	2 cut(s)	56, 1052
BfmI	CTRYAG	1 cut(s)	1206
BfoI	RGCGCY	1 cut(s)	99
BfrI	CTTAAG	1 cut(s)	305
BfuAI	ACCTGC	2 cut(s)	719, 757
BisI	GCNGC	7 cut(s)	94, 1011, 1224, 1293, 1407, 1428, 1551
BlsI	GCNGC	7 cut(s)	95, 1012, 1225, 1294, 1408, 1429, 1552
Bme18I	GGWCC	4 cut(s)	16, 340, 478, 793
BmeT110I	CYCGRG	1 cut(s)	344
BmgBI	CACGTC	1 cut(s)	334
BmgT120I	GGNCC	4 cut(s)	16, 340, 478, 793
BmiI	GGNNCC	5 cut(s)	97, 479, 480, 733, 883
BmrI	ACTGGG	1 cut(s)	1118
BmsI	GCATC	4 cut(s)	400, 408, 1030, 1393
BmuI	ACTGGG	1 cut(s)	1118
BpiI	GAAGAC	1 cut(s)	992
BplI	GAGNNNNNCTC	2 cut(s)	961, 993
BpmI	CTGGAG	1 cut(s)	237
Bpu14I	TTCGAA	1 cut(s)	602
BsaHI	GRCGYC	1 cut(s)	96
BsaJI	CCNNGG	2 cut(s)	558, 1632
BsaWI	WCCGGW	3 cut(s)	324, 377, 681
Bsc4I	CCNNNNNNNGG	1 cut(s)	74
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	2 cut(s)	32, 1113
BseAI	TCCGGA	1 cut(s)	681
BseDI	CCNNGG	2 cut(s)	558, 1632
BseGI	GGATG	1 cut(s)	415
BseLI	CCNNNNNNNGG	1 cut(s)	74
BseMII	CTCAG	1 cut(s)	520
BseNI	ACTGG	2 cut(s)	32, 1113
BseXI	GCAGC	6 cut(s)	1022, 1210, 1304, 1393, 1439, 1562
BsgI	GTGCAG	2 cut(s)	258, 1063
BshFI	GGCC	4 cut(s)	488, 608, 805, 935
BshNI	GGYRCC	1 cut(s)	95
BsiHKAI	GWGCWC	2 cut(s)	1161, 1583
BsiHKCI	CYCGRG	1 cut(s)	344
BsiSI	CCGG	6 cut(s)	75, 90, 132, 325, 378, 682
BslFI	GGGAC	2 cut(s)	25, 491
BslI	CCNNNNNNNGG	1 cut(s)	74
BsmAI	GTCTC	1 cut(s)	656
BsmFI	GGGAC	2 cut(s)	25, 491
BsmI	GAATGC	1 cut(s)	78
BsnI	GGCC	4 cut(s)	488, 608, 805, 935
BsoBI	CYCGRG	1 cut(s)	344
Bsp119I	TTCGAA	1 cut(s)	602
Bsp1286I	GDGCHC	2 cut(s)	1161, 1583
Bsp13I	TCCGGA	1 cut(s)	681
Bsp143I	GATC	3 cut(s)	21, 707, 1112
Bsp19I	CCATGG	1 cut(s)	1632
BspACI	CCGC	4 cut(s)	9, 93, 877, 929
BspANI	GGCC	4 cut(s)	488, 608, 805, 935
BspCNI	CTCAG	1 cut(s)	519
BspEI	TCCGGA	1 cut(s)	681
BspLI	GGNNCC	5 cut(s)	97, 479, 480, 733, 883
BspMI	ACCTGC	2 cut(s)	719, 757
BspPI	GGATC	2 cut(s)	715, 1120
BspQI	GCTCTTC	1 cut(s)	1149
BspT104I	TTCGAA	1 cut(s)	602
BspT107I	GGYRCC	1 cut(s)	95
BspTI	CTTAAG	1 cut(s)	305
BsrFI	RCCGGY	1 cut(s)	89
BsrI	ACTGG	2 cut(s)	32, 1113
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	2 cut(s)	558, 1632
BssMI	GATC	3 cut(s)	21, 707, 1112
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	2 cut(s)	558, 1632
Bst4CI	ACNGT	5 cut(s)	16, 1487, 1495, 1585, 1600
Bst6I	CTCTTC	2 cut(s)	1128, 1149
BstACI	GRCGYC	1 cut(s)	96
BstAFI	CTTAAG	1 cut(s)	305
BstBI	TTCGAA	1 cut(s)	602
BstC8I	GCNNGC	4 cut(s)	251, 273, 807, 829
BstDEI	CTNAG	2 cut(s)	506, 630
BstDSI	CCRYGG	1 cut(s)	1632
BstEII	GGTNACC	2 cut(s)	696, 1032
BstF5I	GGATG	1 cut(s)	415
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	3 cut(s)	98, 827, 1623
BstKTI	GATC	3 cut(s)	24, 710, 1115
BstMAI	GTCTC	1 cut(s)	656
BstMBI	GATC	3 cut(s)	21, 707, 1112
BstMWI	GCNNNNNNNGC	3 cut(s)	236, 992, 1232
BstNSI	RCATGY	3 cut(s)	275, 596, 1192
BstPI	GGTNACC	2 cut(s)	696, 1032
BstSFI	CTRYAG	1 cut(s)	1206
BstV1I	GCAGC	6 cut(s)	1022, 1210, 1304, 1393, 1439, 1562
BstV2I	GAAGAC	1 cut(s)	992
BsuRI	GGCC	4 cut(s)	488, 608, 805, 935
BtgI	CCRYGG	1 cut(s)	1632
BtrI	CACGTC	1 cut(s)	334
BtsCI	GGATG	1 cut(s)	415
BtsI	GCAGTG	1 cut(s)	665
BtsIMutI	CAGTG	3 cut(s)	156, 665, 1590
BveI	ACCTGC	2 cut(s)	719, 757
Cac8I	GCNNGC	4 cut(s)	251, 273, 807, 829
CfoI	GCGC	3 cut(s)	98, 827, 1623
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	4 cut(s)	16, 340, 478, 793
DdeI	CTNAG	2 cut(s)	506, 630
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	3 cut(s)	23, 709, 1114
DpnII	GATC	3 cut(s)	21, 707, 1112
EaeI	YGGCCR	2 cut(s)	486, 933
Eam1104I	CTCTTC	2 cut(s)	1128, 1149
EarI	CTCTTC	2 cut(s)	1128, 1149
Eco130I	CCWWGG	2 cut(s)	558, 1632
Eco147I	AGGCCT	1 cut(s)	805
Eco47I	GGWCC	4 cut(s)	16, 340, 478, 793
Eco57I	CTGAAG	3 cut(s)	132, 603, 1512
Eco88I	CYCGRG	1 cut(s)	344
Eco91I	GGTNACC	2 cut(s)	696, 1032
EcoO109I	RGGNCCY	2 cut(s)	478, 793
EcoO65I	GGTNACC	2 cut(s)	696, 1032
EcoT14I	CCWWGG	2 cut(s)	558, 1632
EcoT22I	ATGCAT	1 cut(s)	401
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	2 cut(s)	558, 1632
FaqI	GGGAC	2 cut(s)	25, 491
FauI	CCCGC	2 cut(s)	2, 870
FauNDI	CATATG	1 cut(s)	404
FblI	GTMKAC	1 cut(s)	353
Fnu4HI	GCNGC	7 cut(s)	94, 1011, 1224, 1293, 1407, 1428, 1551
FokI	GGATG	1 cut(s)	422
Fsp4HI	GCNGC	7 cut(s)	94, 1011, 1224, 1293, 1407, 1428, 1551
FspBI	CTAG	2 cut(s)	56, 1052
GlaI	GCGC	3 cut(s)	97, 826, 1622
GluI	GCNGC	7 cut(s)	94, 1011, 1224, 1293, 1407, 1428, 1551
GsuI	CTGGAG	1 cut(s)	237
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	4 cut(s)	488, 608, 805, 935
HapII	CCGG	6 cut(s)	75, 90, 132, 325, 378, 682
HhaI	GCGC	3 cut(s)	98, 827, 1623
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	3 cut(s)	96, 825, 1621
HinP1I	GCGC	3 cut(s)	96, 825, 1621
HincII	GTYRAC	1 cut(s)	590
HindII	GTYRAC	1 cut(s)	590
HindIII	AAGCTT	4 cut(s)	113, 905, 1165, 1524
HinfI	GANTC	5 cut(s)	443, 626, 852, 944, 1571
HpaII	CCGG	6 cut(s)	75, 90, 132, 325, 378, 682
HphI	GGTGA	9 cut(s)	314, 690, 738, 1026, 1107, 1163, 1370, 1490, 1566
Hpy166II	GTNNAC	2 cut(s)	354, 590
Hpy188I	TCNGA	9 cut(s)	435, 514, 622, 951, 1132, 1312, 1380, 1447, 1500
Hpy188III	TCNNGA	6 cut(s)	19, 56, 216, 656, 682, 786
Hpy8I	GTNNAC	2 cut(s)	354, 590
HpyAV	CCTTC	6 cut(s)	156, 209, 222, 292, 598, 627
HpyCH4III	ACNGT	5 cut(s)	16, 1487, 1495, 1585, 1600
HpyCH4IV	ACGT	2 cut(s)	293, 333
HpyF10VI	GCNNNNNNNGC	3 cut(s)	236, 992, 1232
HpyF3I	CTNAG	2 cut(s)	506, 630
HpySE526I	ACGT	2 cut(s)	293, 333
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	3 cut(s)	96, 825, 1621
KasI	GGCGCC	1 cut(s)	95
KflI	GGGWCCC	1 cut(s)	478
Kpn2I	TCCGGA	1 cut(s)	681
Kzo9I	GATC	3 cut(s)	21, 707, 1112
LguI	GCTCTTC	1 cut(s)	1149
LmnI	GCTCC	1 cut(s)	147
Lsp1109I	GCAGC	6 cut(s)	1022, 1210, 1304, 1393, 1439, 1562
LweI	GCATC	4 cut(s)	400, 408, 1030, 1393
MaeI	CTAG	2 cut(s)	56, 1052
MaeII	ACGT	2 cut(s)	293, 333
MaeIII	GTNAC	6 cut(s)	696, 973, 1032, 1073, 1258, 1585
MalI	GATC	3 cut(s)	23, 709, 1114
MboI	GATC	3 cut(s)	21, 707, 1112
MboII	GAAGA	5 cut(s)	992, 1053, 1145, 1150, 1166
MfeI	CAATTG	2 cut(s)	981, 1638
MhlI	GDGCHC	2 cut(s)	1161, 1583
MlsI	TGGCCA	2 cut(s)	488, 935
MluNI	TGGCCA	2 cut(s)	488, 935
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	1 cut(s)	635
Mox20I	TGGCCA	2 cut(s)	488, 935
Mph1103I	ATGCAT	1 cut(s)	401
MroI	TCCGGA	1 cut(s)	681
MscI	TGGCCA	2 cut(s)	488, 935
MseI	TTAA	5 cut(s)	306, 537, 903, 1193, 1239
Msp20I	TGGCCA	2 cut(s)	488, 935
MspCI	CTTAAG	1 cut(s)	305
MspI	CCGG	6 cut(s)	75, 90, 132, 325, 378, 682
MunI	CAATTG	2 cut(s)	981, 1638
Mva1269I	GAATGC	1 cut(s)	78
MwoI	GCNNNNNNNGC	3 cut(s)	236, 992, 1232
NarI	GGCGCC	1 cut(s)	96
NcoI	CCATGG	1 cut(s)	1632
NdeI	CATATG	1 cut(s)	404
NdeII	GATC	3 cut(s)	21, 707, 1112
NlaIV	GGNNCC	5 cut(s)	97, 479, 480, 733, 883
NmuCI	GTSAC	3 cut(s)	696, 1032, 1585
NsiI	ATGCAT	1 cut(s)	401
NspI	RCATGY	3 cut(s)	275, 596, 1192
NspV	TTCGAA	1 cut(s)	602
PaeI	GCATGC	1 cut(s)	275
PaeR7I	CTCGAG	1 cut(s)	344
PaqCI	CACCTGC	1 cut(s)	757
PceI	AGGCCT	1 cut(s)	805
PciI	ACATGT	1 cut(s)	592
PciSI	GCTCTTC	1 cut(s)	1149
PctI	GAATGC	1 cut(s)	78
PfeI	GAWTC	4 cut(s)	443, 852, 944, 1571
PflFI	GACNNNGTC	1 cut(s)	313
PkrI	GCNGC	7 cut(s)	95, 1012, 1225, 1294, 1408, 1429, 1552
PleI	GAGTC	1 cut(s)	634
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	1 cut(s)	634
PpuMI	RGGWCCY	2 cut(s)	478, 793
PscI	ACATGT	1 cut(s)	592
Psp5II	RGGWCCY	2 cut(s)	478, 793
PspEI	GGTNACC	2 cut(s)	696, 1032
PspN4I	GGNNCC	5 cut(s)	97, 479, 480, 733, 883
PspPI	GGNCC	4 cut(s)	16, 340, 478, 793
PspPPI	RGGWCCY	2 cut(s)	478, 793
PspXI	VCTCGAGB	1 cut(s)	344
PsyI	GACNNNGTC	1 cut(s)	313
SapI	GCTCTTC	1 cut(s)	1149
SaqAI	TTAA	5 cut(s)	306, 537, 903, 1193, 1239
SatI	GCNGC	7 cut(s)	94, 1011, 1224, 1293, 1407, 1428, 1551
Sau3AI	GATC	3 cut(s)	21, 707, 1112
Sau96I	GGNCC	4 cut(s)	16, 340, 478, 793
SchI	GAGTC	1 cut(s)	635
SduI	GDGCHC	2 cut(s)	1161, 1583
SfaNI	GCATC	4 cut(s)	400, 408, 1030, 1393
SfcI	CTRYAG	1 cut(s)	1206
SfoI	GGCGCC	1 cut(s)	97
Sfr274I	CTCGAG	1 cut(s)	344
SfuI	TTCGAA	1 cut(s)	602
SgrAI	CRCCGGYG	1 cut(s)	89
SinI	GGWCC	4 cut(s)	16, 340, 478, 793
SlaI	CTCGAG	1 cut(s)	344
SmlI	CTYRAG	2 cut(s)	305, 344
SmoI	CTYRAG	2 cut(s)	305, 344
SphI	GCATGC	1 cut(s)	275
SseBI	AGGCCT	1 cut(s)	805
SsiI	CCGC	4 cut(s)	9, 93, 877, 929
SspDI	GGCGCC	1 cut(s)	95
SspMI	CTAG	2 cut(s)	56, 1052
StuI	AGGCCT	1 cut(s)	805
StyI	CCWWGG	2 cut(s)	558, 1632
TaaI	ACNGT	5 cut(s)	16, 1487, 1495, 1585, 1600
TaiI	ACGT	2 cut(s)	296, 336
TaqI	TCGA	4 cut(s)	345, 387, 602, 850
TauI	GCSGC	1 cut(s)	96
TfiI	GAWTC	4 cut(s)	443, 852, 944, 1571
Tru1I	TTAA	5 cut(s)	306, 537, 903, 1193, 1239
Tru9I	TTAA	5 cut(s)	306, 537, 903, 1193, 1239
TscAI	CASTG	3 cut(s)	156, 672, 1590
TseFI	GTSAC	3 cut(s)	696, 1032, 1585
TseI	GCWGC	6 cut(s)	1010, 1223, 1292, 1406, 1427, 1550
Tsp45I	GTSAC	3 cut(s)	696, 1032, 1585
TspDTI	ATGAA	6 cut(s)	17, 354, 384, 992, 1119, 1317
TspRI	CASTG	3 cut(s)	156, 672, 1590
Tth111I	GACNNNGTC	1 cut(s)	313
Vha464I	CTTAAG	1 cut(s)	305
VpaK11BI	GGWCC	4 cut(s)	16, 340, 478, 793
XapI	RAATTY	2 cut(s)	127, 1091
XbaI	TCTAGA	1 cut(s)	55
XceI	RCATGY	3 cut(s)	275, 596, 1192
XhoI	CTCGAG	1 cut(s)	344
XmiI	GTMKAC	1 cut(s)	353
XspI	CTAG	2 cut(s)	56, 1052
Zsp2I	ATGCAT	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.