FvH4_1g25770

Cleft lip and palate transmembrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011964
Physical Location & Seq
Reverse (-)
17685482 .. 17693525
8044 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g25770.t1

Sequence Viewer

Length: 1797 bp
ATGGCGCCGCCAGCGCCCGTCGCCGCCGCAGCAGCGGGAGATGGGCAAGTACAAGGCGGACGGCAGCAAGGAGGGTTTGGGCAAAGCATCGGCGGAATCATAAGAATGGCCGTGATTTGGTACTTCGCTTCCAAATTCTTCTCCTCTCCCTCCAAAAAGTCTTCTGATCCTTCTCAGCTCAGCTCCAATATCTTTCCCAAGGGTGAACCACTGGATATGTGGTTTTATATAACTGAACATGAAAAGTTTAATGAATTCGGGAGCGAAAGTGCGCTTATATGGCATGAAACTAATATCCCTTACGCCGTCTATGGGCCGGAGAGTACCAGGACTCTGTCTATGAAGTACTATCCATCGGAGGCATTGAAGCACAATGGGACTCTCTATGCTCATGTGTTCTTTGCCCGCGCCGGTTACCCTGCAGACCCAAATGATCGGGAGTATCTGCCTCTAACTGCTTTTGGCAGGACGCATGCTATTGTGATAAACTTGCCCAAGTCGAAAGCTTCTAAAAAGAAAAGTTTGCTGGGGGACTCAAAAGACTCCGATGAGGATGTAAAGATTACTGAGGTGGTTGATAATACTCAAGGTGATTCTGAGGATAATGGTCCTGAGGAGTGGGTATCATACTGGAAACCAAATATTACTGTTAATTTGGTTGATGATTTTACCCGATACCCTCAGAATGCTGTTCCACCTAATGTTGCTCCTTACTTAAATGTGGAGCCTAATTCTGGAAATTACTTTCCAACCATTTACTTCAACGAATTTTGGTTACTTCGAGACAAGTTAATACCGATTAATGAAACAGTGAAAGAATTACCGCTGAATCTGGAAGTAGGTCCCATAAGCATGACCAAGTGGCAACTGTTCCTTCAAATTGATCAGTCTTTCCAAATTCACCGTAGTTATGGAAGCATGCTCGAGGGTGAGGCTGATGAACTGAAGAGAGTATTCTTGGAAGGAAATCCTTACCTCTTGGCAATCACAATGGCTGTTTCGTTACTTCATTCAGTGTTTGACTTCTTGGCATTCAAAAACGATATTCAGTTTTGGAACAAAAATAAGTCTATGGAAGGGCTGTCTGCGAAGTCTGTCGTTGTGAACTTCATAAGCCAGTTCATTATCTTCCTCTATCTACTTGACAACGACACTTCATGGATGATACTTGCAAGCTCTGGAGTTGGCTGCTGCATTGAATTTTGGAAAATTGGAAAGGCCATGCACATAGAGATTGATAGAAGTGGGAAGATACCAATGTTGAGGTTCCGTGATCGTGAGTCATATTCAGGGAATAAGACAAAGGAATATGATGATATCGCAATGAAATATTTGACGTATGTGCTCTTGTTCCTTGTCGCATGCTCCTCTATATATTCACTCAAGTACGAGCAGCACAAGAGCTGGTATTCTTGGGTTCTCTCTTCATTCACGAGCTGTGTCTACATGTTCGGTTTTATTATGATGTGCCCTCAATTGTTCATCAACTACAAGCTGAAGTCAGTAGCCCATCTACCCTGGAGACAGATGACTTACAAGTTCCTCAACACCATCATTGATGACCTATTTGCCTTTGTCATAAAAATGCCAATGTTGCATCGCCTTTCTGTGTTCCGTGATGATGTCATATTTCTGATATACATATACCAGAGATGGGTCTATCCAGTGGACAAAAAACGTGTAAATGAATTTGGATTCAGTGCTGAAGCTGATCAGGTCACCGATCAGGTCACTGAACAGGTCACGGATGGCACAGAGGACACTGCAGTTAAGCCAGAAGAGAAGAAAACCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLPTM1

Protein Analysis

599

Amino Acids

68.5

Weight (kDa)

5.68

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLPTM1 PF05602 32 - 463 2.8e-151 Cleft lip and palate transmembrane protein 1 (CLPTM1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011964)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08500 AT5G08500 AT5G23575
fragaria_vesca FvH4_1g25770
malus_domestica MD15G1140200.v1.1
prunus_persica Prupe.4G286100_v2.0.a1
pyrus_communis pycom15g12670 pycom520g00950
rosa_chinensis RchiOBHm_Chr3g0484771
rosa_laevigata RLG00000023204
rosa_multiflora Rmu_sc0001689.1_g000011 Rmu_sc0006653.1_g000006 Rmu_sc0020526.1_g000001
rosa_roxburghii Rroxscaffold_6G00397450
rosa_rugosa Rorug03G0213800
rosa_samantha Rh3BG299200 Rh3CG297000 Rh3DG292800
rosa_wichuraiana Rw3G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 1 cut(s) 1443
AccII CGCG 1 cut(s) 408
AciI CCGC 8 cut(s) 8, 24, 27, 35, 57, 93, 406, 824
AclWI GGATC 1 cut(s) 161
AcoI YGGCCR 1 cut(s) 108
AcsI RAATTY 6 cut(s) 134, 254, 767, 897, 1199, 1688
AcuI CTGAAG 3 cut(s) 965, 1517, 1725
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 5 cut(s) 51, 122, 325, 347, 1388
AfiI CCNNNNNNNGG 4 cut(s) 117, 312, 734, 1654
AflIII ACRYGT 2 cut(s) 1446, 1678
AgsI TTSAA 5 cut(s) 367, 763, 878, 1036, 1199
AjnI CCWGG 2 cut(s) 326, 1517
AluBI AGCT 8 cut(s) 178, 183, 506, 1176, 1404, 1437, 1495, 1709
AluI AGCT 8 cut(s) 178, 183, 506, 1176, 1404, 1437, 1495, 1709
Alw21I GWGCWC 1 cut(s) 1347
Alw26I GTCTC 2 cut(s) 777, 1516
AlwI GGATC 1 cut(s) 161
Ama87I CYCGRG 1 cut(s) 923
AoxI GGCC 3 cut(s) 108, 314, 1218
ApeKI GCWGC 6 cut(s) 29, 32, 64, 1188, 1191, 1393
ApoI RAATTY 6 cut(s) 134, 254, 767, 897, 1199, 1688
AseI ATTAAT 1 cut(s) 801
AspLEI GCGC 4 cut(s) 7, 16, 274, 410
AspS9I GGNCC 3 cut(s) 314, 608, 842
AsuHPI GGTGA 5 cut(s) 215, 602, 893, 941, 1711
AvaI CYCGRG 1 cut(s) 923
AvaII GGWCC 2 cut(s) 608, 842
AxyI CCTNAGG 1 cut(s) 612
BaeGI GKGCMC 1 cut(s) 1472
BaeI ACNNNNGTAYC 2 cut(s) 1244, 1277
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 1 cut(s) 1432
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 1347
BbvI GCAGC 6 cut(s) 41, 44, 76, 1175, 1178, 1405
BccI CCATC 6 cut(s) 35, 361, 1518, 1559, 1647, 1742
BceAI ACGGC 3 cut(s) 77, 95, 290
BciT130I CCWGG 2 cut(s) 328, 1519
BclI TGATCA 2 cut(s) 883, 1711
BcoDI GTCTC 2 cut(s) 777, 1516
BfmI CTRYAG 2 cut(s) 420, 1764
BfoI RGCGCY 2 cut(s) 8, 17
BisI GCNGC 9 cut(s) 8, 24, 27, 30, 33, 65, 1189, 1192, 1394
BlpI GCTNAGC 1 cut(s) 179
BlsI GCNGC 9 cut(s) 9, 25, 28, 31, 34, 66, 1190, 1193, 1395
BmcAI AGTACT 1 cut(s) 347
Bme1390I CCNGG 2 cut(s) 328, 1519
Bme18I GGWCC 2 cut(s) 608, 842
BmeT110I CYCGRG 1 cut(s) 923
BmgT120I GGNCC 3 cut(s) 314, 608, 842
BmiI GGNNCC 4 cut(s) 6, 726, 844, 1268
BmrFI CCNGG 2 cut(s) 328, 1519
BmsI GCATC 2 cut(s) 96, 1606
BpiI GAAGAC 1 cut(s) 153
BpmI CTGGAG 2 cut(s) 1200, 1540
Bpu1102I GCTNAGC 1 cut(s) 179
BpuEI CTTGAG 2 cut(s) 570, 1367
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 198, 1517
BsaXI ACNNNNNCTCC 2 cut(s) 253, 283
Bsc4I CCNNNNNNNGG 4 cut(s) 117, 312, 734, 1654
Bse118I RCCGGY 1 cut(s) 410
Bse1I ACTGG 4 cut(s) 216, 635, 1117, 1664
Bse21I CCTNAGG 1 cut(s) 612
Bse3DI GCAATG 1 cut(s) 1329
BseBI CCWGG 2 cut(s) 328, 1519
BseDI CCNNGG 2 cut(s) 198, 1517
BseGI GGATG 3 cut(s) 559, 1167, 1753
BseLI CCNNNNNNNGG 4 cut(s) 117, 312, 734, 1654
BseMI GCAATG 1 cut(s) 1329
BseMII CTCAG 6 cut(s) 188, 193, 558, 588, 603, 695
BseNI ACTGG 4 cut(s) 216, 635, 1117, 1664
BseRI GAGGAG 3 cut(s) 133, 629, 1357
BseSI GKGCMC 1 cut(s) 1472
BseXI GCAGC 6 cut(s) 41, 44, 76, 1175, 1178, 1405
BseYI CCCAGC 1 cut(s) 526
Bsh1236I CGCG 1 cut(s) 408
BshFI GGCC 3 cut(s) 110, 316, 1220
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 1347
BsiHKCI CYCGRG 1 cut(s) 923
BsiSI CCGG 2 cut(s) 317, 411
BslFI GGGAC 3 cut(s) 391, 545, 828
BslI CCNNNNNNNGG 4 cut(s) 117, 312, 734, 1654
BsmAI GTCTC 2 cut(s) 777, 1516
BsmFI GGGAC 3 cut(s) 391, 545, 828
BsmI GAATGC 2 cut(s) 691, 1031
BsnI GGCC 3 cut(s) 110, 316, 1220
BsoBI CYCGRG 1 cut(s) 923
Bsp1286I GDGCHC 2 cut(s) 1347, 1472
Bsp143I GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
Bsp1720I GCTNAGC 1 cut(s) 179
BspACI CCGC 8 cut(s) 8, 24, 27, 35, 57, 93, 406, 824
BspANI GGCC 3 cut(s) 110, 316, 1220
BspCNI CTCAG 6 cut(s) 187, 192, 559, 589, 604, 694
BspFNI CGCG 1 cut(s) 408
BspLI GGNNCC 4 cut(s) 6, 726, 844, 1268
BspMAI CTGCAG 2 cut(s) 424, 1768
BspPI GGATC 1 cut(s) 161
BspT107I GGYRCC 1 cut(s) 4
BsrDI GCAATG 1 cut(s) 1329
BsrFI RCCGGY 1 cut(s) 410
BsrI ACTGG 4 cut(s) 216, 635, 1117, 1664
BssAI RCCGGY 1 cut(s) 410
BssECI CCNNGG 2 cut(s) 198, 1517
BssMI GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1432
BssT1I CCWWGG 1 cut(s) 198
Bst2BI CACGAG 1 cut(s) 1432
Bst2UI CCWGG 2 cut(s) 328, 1519
Bst4CI ACNGT 4 cut(s) 649, 811, 870, 905
Bst6I CTCTTC 3 cut(s) 941, 1429, 1773
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 6 cut(s) 12, 406, 474, 920, 1174, 1363
BstDEI CTNAG 6 cut(s) 174, 179, 567, 597, 612, 681
BstEII GGTNACC 2 cut(s) 413, 1717
BstF5I GGATG 3 cut(s) 559, 1167, 1753
BstFNI CGCG 1 cut(s) 408
BstH2I RGCGCY 2 cut(s) 8, 17
BstHHI GCGC 4 cut(s) 7, 16, 274, 410
BstKTI GATC 6 cut(s) 169, 436, 886, 1276, 1714, 1726
BstMAI GTCTC 2 cut(s) 777, 1516
BstMBI GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
BstMWI GCNNNNNNNGC 7 cut(s) 11, 13, 20, 29, 32, 280, 1594
BstNI CCWGG 2 cut(s) 328, 1519
BstNSI RCATGY 4 cut(s) 476, 922, 1365, 1450
BstPI GGTNACC 2 cut(s) 413, 1717
BstSCI CCNGG 2 cut(s) 326, 1517
BstSFI CTRYAG 2 cut(s) 420, 1764
BstSLI GKGCMC 1 cut(s) 1472
BstUI CGCG 1 cut(s) 408
BstV1I GCAGC 6 cut(s) 41, 44, 76, 1175, 1178, 1405
BstV2I GAAGAC 1 cut(s) 153
Bsu36I CCTNAGG 1 cut(s) 612
BsuRI GGCC 3 cut(s) 110, 316, 1220
BtgZI GCGATG 1 cut(s) 1583
BtsCI GGATG 3 cut(s) 559, 1167, 1753
BtsI GCAGTG 1 cut(s) 1761
BtsIMutI CAGTG 7 cut(s) 209, 816, 1020, 1671, 1705, 1731, 1761
Cac8I GCNNGC 6 cut(s) 12, 406, 474, 920, 1174, 1363
CfoI GCGC 4 cut(s) 7, 16, 274, 410
Cfr10I RCCGGY 1 cut(s) 410
Cfr13I GGNCC 3 cut(s) 314, 608, 842
CseI GACGC 1 cut(s) 478
Csp6I GTAC 5 cut(s) 50, 121, 324, 346, 1387
CviQI GTAC 5 cut(s) 50, 121, 324, 346, 1387
DdeI CTNAG 6 cut(s) 174, 179, 567, 597, 612, 681
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 168, 435, 885, 1275, 1713, 1725
DpnII GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
EaeI YGGCCR 1 cut(s) 108
Eam1104I CTCTTC 3 cut(s) 941, 1429, 1773
EarI CTCTTC 3 cut(s) 941, 1429, 1773
EciI GGCGGA 2 cut(s) 72, 108
Eco130I CCWWGG 1 cut(s) 198
Eco32I GATATC 1 cut(s) 1318
Eco47I GGWCC 2 cut(s) 608, 842
Eco57I CTGAAG 3 cut(s) 965, 1517, 1725
Eco81I CCTNAGG 1 cut(s) 612
Eco88I CYCGRG 1 cut(s) 923
Eco91I GGTNACC 2 cut(s) 413, 1717
EcoO109I RGGNCCY 1 cut(s) 842
EcoO65I GGTNACC 2 cut(s) 413, 1717
EcoRI GAATTC 1 cut(s) 254
EcoRII CCWGG 2 cut(s) 326, 1517
EcoRV GATATC 1 cut(s) 1318
EcoT14I CCWWGG 1 cut(s) 198
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 198
FaqI GGGAC 3 cut(s) 391, 545, 828
FauI CCCGC 2 cut(s) 28, 413
FbaI TGATCA 2 cut(s) 883, 1711
FblI GTMKAC 1 cut(s) 1443
Fnu4HI GCNGC 9 cut(s) 8, 24, 27, 30, 33, 65, 1189, 1192, 1394
FokI GGATG 3 cut(s) 566, 1174, 1760
Fsp4HI GCNGC 9 cut(s) 8, 24, 27, 30, 33, 65, 1189, 1192, 1394
GlaI GCGC 4 cut(s) 6, 15, 273, 409
GluI GCNGC 9 cut(s) 8, 24, 27, 30, 33, 65, 1189, 1192, 1394
GsaI CCCAGC 1 cut(s) 530
GsuI CTGGAG 2 cut(s) 1200, 1540
HaeII RGCGCY 2 cut(s) 8, 17
HaeIII GGCC 3 cut(s) 110, 316, 1220
HapII CCGG 2 cut(s) 317, 411
HgaI GACGC 1 cut(s) 478
HhaI GCGC 4 cut(s) 7, 16, 274, 410
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 4 cut(s) 5, 14, 272, 408
HinP1I GCGC 4 cut(s) 5, 14, 272, 408
HindIII AAGCTT 1 cut(s) 504
HinfI GANTC 9 cut(s) 96, 331, 379, 533, 542, 593, 829, 1280, 1695
HpaII CCGG 2 cut(s) 317, 411
HphI GGTGA 5 cut(s) 215, 602, 893, 941, 1711
Hpy166II GTNNAC 4 cut(s) 206, 1105, 1444, 1669
Hpy188I TCNGA 6 cut(s) 166, 358, 547, 598, 684, 1635
Hpy188III TCNNGA 9 cut(s) 259, 437, 611, 735, 782, 833, 1179, 1277, 1432
Hpy8I GTNNAC 4 cut(s) 206, 1105, 1444, 1669
Hpy99I CGWCG 1 cut(s) 23
HpyAV CCTTC 4 cut(s) 180, 884, 956, 1070
HpyCH4III ACNGT 4 cut(s) 649, 811, 870, 905
HpyCH4IV ACGT 2 cut(s) 1337, 1678
HpyCH4V TGCA 6 cut(s) 422, 1172, 1194, 1225, 1597, 1766
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 13, 20, 29, 32, 280, 1594
HpyF3I CTNAG 6 cut(s) 174, 179, 567, 597, 612, 681
HpySE526I ACGT 2 cut(s) 1337, 1678
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 4 cut(s) 5, 14, 272, 408
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 2 cut(s) 883, 1711
Kzo9I GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
LmnI GCTCC 5 cut(s) 188, 261, 712, 724, 1370
Lsp1109I GCAGC 6 cut(s) 41, 44, 76, 1175, 1178, 1405
LweI GCATC 2 cut(s) 96, 1606
MaeII ACGT 2 cut(s) 1337, 1678
MaeIII GTNAC 6 cut(s) 413, 774, 1002, 1717, 1729, 1741
MalI GATC 6 cut(s) 168, 435, 885, 1275, 1713, 1725
MboI GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
MboII GAAGA 8 cut(s) 130, 153, 958, 1120, 1261, 1416, 1790, 1795
MfeI CAATTG 1 cut(s) 1475
MhlI GDGCHC 2 cut(s) 1347, 1472
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 5 cut(s) 325, 373, 527, 536, 1289
MmeI TCCRAC 1 cut(s) 773
MseI TTAA 6 cut(s) 249, 651, 716, 791, 801, 1770
MslI CAYNNNNRTG 3 cut(s) 104, 851, 1583
MspA1I CMGCKG 2 cut(s) 35, 826
MspI CCGG 2 cut(s) 317, 411
MspR9I CCNGG 2 cut(s) 328, 1519
MunI CAATTG 1 cut(s) 1475
Mva1269I GAATGC 2 cut(s) 691, 1031
MvaI CCWGG 2 cut(s) 328, 1519
MvnI CGCG 1 cut(s) 408
MwoI GCNNNNNNNGC 7 cut(s) 11, 13, 20, 29, 32, 280, 1594
NarI GGCGCC 1 cut(s) 5
NdeII GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
NlaIV GGNNCC 4 cut(s) 6, 726, 844, 1268
NmuCI GTSAC 3 cut(s) 1717, 1729, 1741
NspI RCATGY 4 cut(s) 476, 922, 1365, 1450
PaeI GCATGC 3 cut(s) 476, 922, 1365
PaeR7I CTCGAG 1 cut(s) 923
PciI ACATGT 1 cut(s) 1446
PctI GAATGC 2 cut(s) 691, 1031
PfeI GAWTC 4 cut(s) 96, 593, 829, 1695
PflFI GACNNNGTC 1 cut(s) 334
PkrI GCNGC 9 cut(s) 9, 25, 28, 31, 34, 66, 1190, 1193, 1395
PleI GAGTC 5 cut(s) 325, 373, 527, 536, 1288
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 5 cut(s) 325, 373, 527, 536, 1288
PpuMI RGGWCCY 1 cut(s) 842
PscI ACATGT 1 cut(s) 1446
PshBI ATTAAT 1 cut(s) 801
Psp5II RGGWCCY 1 cut(s) 842
Psp6I CCWGG 2 cut(s) 326, 1517
PspEI GGTNACC 2 cut(s) 413, 1717
PspFI CCCAGC 1 cut(s) 526
PspGI CCWGG 2 cut(s) 326, 1517
PspN4I GGNNCC 4 cut(s) 6, 726, 844, 1268
PspPI GGNCC 3 cut(s) 314, 608, 842
PspPPI RGGWCCY 1 cut(s) 842
PspXI VCTCGAGB 1 cut(s) 923
PstI CTGCAG 2 cut(s) 424, 1768
PsyI GACNNNGTC 1 cut(s) 334
RsaI GTAC 5 cut(s) 51, 122, 325, 347, 1388
RsaNI GTAC 5 cut(s) 50, 121, 324, 346, 1387
RseI CAYNNNNRTG 3 cut(s) 104, 851, 1583
SaqAI TTAA 6 cut(s) 249, 651, 716, 791, 801, 1770
SatI GCNGC 9 cut(s) 8, 24, 27, 30, 33, 65, 1189, 1192, 1394
Sau3AI GATC 6 cut(s) 166, 433, 883, 1273, 1711, 1723
Sau96I GGNCC 3 cut(s) 314, 608, 842
ScaI AGTACT 1 cut(s) 347
SchI GAGTC 5 cut(s) 325, 373, 527, 536, 1289
ScrFI CCNGG 2 cut(s) 328, 1519
SduI GDGCHC 2 cut(s) 1347, 1472
SfaNI GCATC 2 cut(s) 96, 1606
SfcI CTRYAG 2 cut(s) 420, 1764
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 923
SinI GGWCC 2 cut(s) 608, 842
SlaI CTCGAG 1 cut(s) 923
SmiMI CAYNNNNRTG 3 cut(s) 104, 851, 1583
SmlI CTYRAG 3 cut(s) 585, 923, 1382
SmoI CTYRAG 3 cut(s) 585, 923, 1382
SphI GCATGC 3 cut(s) 476, 922, 1365
SsiI CCGC 8 cut(s) 8, 24, 27, 35, 57, 93, 406, 824
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 2 cut(s) 643, 1331
StyD4I CCNGG 2 cut(s) 326, 1517
StyI CCWWGG 1 cut(s) 198
TaaI ACNGT 4 cut(s) 649, 811, 870, 905
TaiI ACGT 2 cut(s) 1340, 1681
TaqI TCGA 3 cut(s) 500, 781, 924
TatI WGTACW 2 cut(s) 49, 345
TauI GCSGC 3 cut(s) 10, 26, 29
TfiI GAWTC 4 cut(s) 96, 593, 829, 1695
Tru1I TTAA 6 cut(s) 249, 651, 716, 791, 801, 1770
Tru9I TTAA 6 cut(s) 249, 651, 716, 791, 801, 1770
TscAI CASTG 7 cut(s) 216, 816, 1020, 1671, 1705, 1738, 1768
TseFI GTSAC 3 cut(s) 1717, 1729, 1741
TseI GCWGC 6 cut(s) 29, 32, 64, 1188, 1191, 1393
Tsp45I GTSAC 3 cut(s) 1717, 1729, 1741
TspGWI ACGGA 3 cut(s) 1259, 1604, 1760
TspRI CASTG 7 cut(s) 216, 816, 1020, 1671, 1705, 1738, 1768
Tth111I GACNNNGTC 1 cut(s) 334
VpaK11BI GGWCC 2 cut(s) 608, 842
VspI ATTAAT 1 cut(s) 801
XapI RAATTY 6 cut(s) 134, 254, 767, 897, 1199, 1688
XceI RCATGY 4 cut(s) 476, 922, 1365, 1450
XcmI CCANNNNNNNNNTGG 1 cut(s) 216
XhoI CTCGAG 1 cut(s) 923
XmiI GTMKAC 1 cut(s) 1443
ZrmI AGTACT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.