RchiOBHm_Chr3g0484771

Cleft lip and palate transmembrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0011964
Physical Location & Seq
Reverse (-)
31246277 .. 31254490
8214 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44948

Sequence Viewer

Length: 1797 bp
ATGGCGCCGCCAGCGCCCGTCGCCGCAGCAGATGGGCAAGTCCAAGGCGGACGGCAGCAAGGAGGGATTGGTCAGAGCATCGGTGGAATCATACGGATGGCTGTGATTTGGTACTTCGCTTCCAAATTCTTTTCCTCCTCCAAAAAGCCTTCTGATCCTTCTCAGCTAAGCTCCAATATCTTCCCCAAGGGTGAACCACTGGATATGTGGTTCTATGTTACTGAACATGAGAAGTTCAATGAATTCGGGAGTGAAAGTGCGCTTGTATGGCATGAAACTAATATCCCCTACGCTACCTATGGGCCGGAGAGTACCAGGACTCTGTCTATGAAGTACTATCCATCTGAGGCATTAAAGCACAATGGGAGTCTCTATGCTCATGTTTTCTTTGCCCGCTCTGGTTACCCTGCGGACCCAAATGATCCAGAGTATCTGCCTCTAGCTGCGTTTGGAAAGACGCATGTCATTGTGACACACTTGCCCAAGTCGAAAGCTGGTAAAAAGAGGAGTTTGCTGGGGGCCTCAAAAGACACTGAAGAGGATGTAAAAATTGCTGAGGTGGTTGATGATACTCAAGGTGATTCTGAGGATAATGGTCCTGAGGAGTGGGTATCATACTTTAAACCAAATGTTACTGTCAATTTGGTTGATGATTTTACCCGATATCCTCATAATGCTGTTCCACCCAATGTTGCTCCTTACTTGAATGTGGAGCCTAATTCTGGCAATTACTTTCCAACCATTTTCTTCAATGAATTTTGGTTACTTCGAGATAAGTTGATACCAATTAATGAAACAGTGAAAGAATTGCAGCTGAATCTGGAAGTAGGTCCCATAAGCATGACTAAGTGGCAACTATTCCTACAGATTGATCAGTCTTTCCAAATTCACCGTAGTTATGGAAGCATGCTCGAGGGTGAGGCTGATGAACTGAAGAGAGTATTCTTGGAAGGAAATCCTTACCTCCTGGCAATCACTATGGCTGTTTCTGTACTTCATTCAGTGTTTGACTTCTTGGCATTCAAAAACGATATTCAGTTTTGGAACAAAAATAAGTCTATGGAAGGGCTGTCTGCAAAGTCTGTTGTCGTGAGCTTCATAAGCCAGTTCATTATCTTCCTCTATCTACTTGACAATGACACTTCATGGATGATACTTGCAAGCTCTGGAGTTGGCTGCTGCATTGAATTTTGGAAAATTGGGAAGGCCATGCACATAGAGATTGATAGAAGTGGGAAGATACCAATGTTGAGATTCCGAGATCGTGAGTCATATGCAGGGAATAAGACAAAGGAATATGATGATATCGCAATGAAATATTTGACGTATGTGCTCTTGTTCCTTGTCGCATGCTCCTCTATTTATTCACTCAAGTACGAGCAGCACAAGAGCTGGTATTCTTGGATTCTCTCTTCATTCACGAGCTGTGTCTACATGTTCGGTTTTATTATGATGTGCCCTCAATTGTTCATTAACTATAAGCTGAAGTCGGTAGCTCATCTACCCTGGAGACAGATGACTTACAAGTTCCTCAACACCATCATCGATGATCTATTTGCTTTTGTCATAAAAATGCCAATGTTGCATCGCCTTTCTGTGTTCCGTGATGATATCATATTTCTGATATACATATACCAGAGATGGGTCTATCCAGTGGACAAAAAACGTGTAAATGAATTTGGTTTCAGTGGTGAAGCCGATCAGGTCGCCGATCAGGTCACCGATCAGGTCATTGAACAGGTCACTGATGGTACAGACGACACTGAAGTTAAGCAAGAAGCGAAGAAGACCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLPTM1

Protein Analysis

598

Amino Acids

68.42

Weight (kDa)

5.71

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLPTM1 PF05602 30 - 459 4.5e-150 Cleft lip and palate transmembrane protein 1 (CLPTM1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011964)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08500 AT5G08500 AT5G23575
fragaria_vesca FvH4_1g25770
malus_domestica MD15G1140200.v1.1
prunus_persica Prupe.4G286100_v2.0.a1
pyrus_communis pycom15g12670 pycom520g00950
rosa_chinensis RchiOBHm_Chr3g0484771
rosa_laevigata RLG00000023204
rosa_multiflora Rmu_sc0001689.1_g000011 Rmu_sc0006653.1_g000006 Rmu_sc0020526.1_g000001
rosa_roxburghii Rroxscaffold_6G00397450
rosa_rugosa Rorug03G0213800
rosa_samantha Rh3BG299200 Rh3CG297000 Rh3DG292800
rosa_wichuraiana Rw3G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 396
AccI GTMKAC 1 cut(s) 1431
AciI CCGC 5 cut(s) 8, 24, 48, 394, 410
AclWI GGATC 2 cut(s) 149, 416
AcsI RAATTY 6 cut(s) 125, 242, 755, 885, 1187, 1676
AcuI CTGAAG 4 cut(s) 555, 953, 1505, 1785
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 6 cut(s) 113, 313, 335, 993, 1376, 1753
AfiI CCNNNNNNNGG 2 cut(s) 722, 1642
AflIII ACRYGT 2 cut(s) 1434, 1666
AgsI TTSAA 6 cut(s) 238, 706, 751, 1024, 1187, 1736
AjnI CCWGG 3 cut(s) 314, 966, 1505
AloI GAACNNNNNNTCC 2 cut(s) 194, 226
Alw21I GWGCWC 1 cut(s) 1335
Alw26I GTCTC 2 cut(s) 374, 1504
AlwI GGATC 2 cut(s) 149, 416
Ama87I CYCGRG 1 cut(s) 911
AoxI GGCC 3 cut(s) 302, 519, 1206
ApeKI GCWGC 7 cut(s) 26, 55, 443, 811, 1176, 1179, 1381
ApoI RAATTY 6 cut(s) 125, 242, 755, 885, 1187, 1676
AseI ATTAAT 1 cut(s) 789
AspLEI GCGC 3 cut(s) 7, 16, 262
AspS9I GGNCC 5 cut(s) 302, 412, 519, 596, 830
AsuHPI GGTGA 6 cut(s) 203, 590, 881, 929, 1703, 1711
AvaI CYCGRG 1 cut(s) 911
AvaII GGWCC 3 cut(s) 412, 596, 830
AxyI CCTNAGG 1 cut(s) 600
BaeGI GKGCMC 1 cut(s) 1460
BaeI ACNNNNGTAYC 2 cut(s) 1232, 1265
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 1 cut(s) 1420
BbsI GAAGAC 1 cut(s) 1793
Bbv12I GWGCWC 1 cut(s) 1335
BbvCI CCTCAGC 1 cut(s) 555
BbvI GCAGC 7 cut(s) 38, 67, 430, 823, 1163, 1166, 1393
BccI CCATC 6 cut(s) 26, 91, 349, 1547, 1635, 1742
BceAI ACGGC 1 cut(s) 68
BciT130I CCWGG 3 cut(s) 316, 968, 1507
BclI TGATCA 1 cut(s) 871
BcoDI GTCTC 2 cut(s) 374, 1504
BfaI CTAG 1 cut(s) 440
BfmI CTRYAG 1 cut(s) 863
BfoI RGCGCY 2 cut(s) 8, 17
BisI GCNGC 9 cut(s) 8, 24, 27, 56, 444, 812, 1177, 1180, 1382
BlpI GCTNAGC 1 cut(s) 167
BlsI GCNGC 9 cut(s) 9, 25, 28, 57, 445, 813, 1178, 1181, 1383
BmcAI AGTACT 1 cut(s) 335
Bme1390I CCNGG 3 cut(s) 316, 968, 1507
Bme18I GGWCC 3 cut(s) 412, 596, 830
BmeT110I CYCGRG 1 cut(s) 911
BmgT120I GGNCC 5 cut(s) 302, 412, 519, 596, 830
BmiI GGNNCC 5 cut(s) 6, 414, 520, 714, 832
BmrFI CCNGG 3 cut(s) 316, 968, 1507
BmsI GCATC 2 cut(s) 87, 1594
BoxI GACNNNNGTC 1 cut(s) 461
BpiI GAAGAC 1 cut(s) 1793
BpmI CTGGAG 2 cut(s) 1188, 1528
Bpu10I CCTNAGC 1 cut(s) 555
Bpu1102I GCTNAGC 1 cut(s) 167
BpuEI CTTGAG 2 cut(s) 558, 1355
Bsa29I ATCGAT 1 cut(s) 1545
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 43, 186, 1505
BsaXI ACNNNNNCTCC 2 cut(s) 241, 271
Bsc4I CCNNNNNNNGG 2 cut(s) 722, 1642
Bse1I ACTGG 3 cut(s) 204, 1105, 1652
Bse21I CCTNAGG 1 cut(s) 600
Bse3DI GCAATG 1 cut(s) 1317
BseBI CCWGG 3 cut(s) 316, 968, 1507
BseCI ATCGAT 1 cut(s) 1545
BseDI CCNNGG 3 cut(s) 43, 186, 1505
BseGI GGATG 3 cut(s) 102, 547, 1155
BseLI CCNNNNNNNGG 2 cut(s) 722, 1642
BseMI GCAATG 1 cut(s) 1317
BseMII CTCAG 5 cut(s) 176, 336, 546, 576, 591
BseNI ACTGG 3 cut(s) 204, 1105, 1652
BseRI GAGGAG 4 cut(s) 127, 520, 617, 1345
BseSI GKGCMC 1 cut(s) 1460
BseXI GCAGC 7 cut(s) 38, 67, 430, 823, 1163, 1166, 1393
BseYI CCCAGC 1 cut(s) 514
BshFI GGCC 3 cut(s) 304, 521, 1208
BshNI GGYRCC 1 cut(s) 4
BshVI ATCGAT 1 cut(s) 1545
BsiHKAI GWGCWC 1 cut(s) 1335
BsiHKCI CYCGRG 1 cut(s) 911
BsiSI CCGG 1 cut(s) 305
BslFI GGGAC 1 cut(s) 816
BslI CCNNNNNNNGG 2 cut(s) 722, 1642
BsmAI GTCTC 2 cut(s) 374, 1504
BsmFI GGGAC 1 cut(s) 816
BsmI GAATGC 1 cut(s) 1019
BsnI GGCC 3 cut(s) 304, 521, 1208
BsoBI CYCGRG 1 cut(s) 911
Bsp1286I GDGCHC 2 cut(s) 1335, 1460
Bsp143I GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
Bsp1720I GCTNAGC 1 cut(s) 167
BspACI CCGC 5 cut(s) 8, 24, 48, 394, 410
BspANI GGCC 3 cut(s) 304, 521, 1208
BspCNI CTCAG 5 cut(s) 175, 337, 547, 577, 592
BspDI ATCGAT 1 cut(s) 1545
BspLI GGNNCC 5 cut(s) 6, 414, 520, 714, 832
BspPI GGATC 2 cut(s) 149, 416
BspT107I GGYRCC 1 cut(s) 4
BsrBI CCGCTC 1 cut(s) 396
BsrDI GCAATG 1 cut(s) 1317
BsrI ACTGG 3 cut(s) 204, 1105, 1652
BssECI CCNNGG 3 cut(s) 43, 186, 1505
BssMI GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1420
BssT1I CCWWGG 2 cut(s) 43, 186
Bst2BI CACGAG 1 cut(s) 1420
Bst2UI CCWGG 3 cut(s) 316, 968, 1507
Bst4CI ACNGT 3 cut(s) 637, 799, 893
Bst6I CTCTTC 3 cut(s) 531, 929, 1417
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 5 cut(s) 12, 394, 908, 1162, 1351
BstDEI CTNAG 7 cut(s) 162, 167, 345, 555, 585, 600, 846
BstEII GGTNACC 2 cut(s) 401, 1717
BstF5I GGATG 3 cut(s) 102, 547, 1155
BstH2I RGCGCY 2 cut(s) 8, 17
BstHHI GCGC 3 cut(s) 7, 16, 262
BstKTI GATC 8 cut(s) 157, 424, 874, 1264, 1552, 1702, 1714, 1726
BstMAI GTCTC 2 cut(s) 374, 1504
BstMBI GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
BstMWI GCNNNNNNNGC 6 cut(s) 11, 13, 20, 268, 1101, 1582
BstNI CCWGG 3 cut(s) 316, 968, 1507
BstNSI RCATGY 4 cut(s) 464, 910, 1353, 1438
BstPAI GACNNNNGTC 1 cut(s) 461
BstPI GGTNACC 2 cut(s) 401, 1717
BstSCI CCNGG 3 cut(s) 314, 966, 1505
BstSFI CTRYAG 1 cut(s) 863
BstSLI GKGCMC 1 cut(s) 1460
BstV1I GCAGC 7 cut(s) 38, 67, 430, 823, 1163, 1166, 1393
BstV2I GAAGAC 1 cut(s) 1793
Bsu15I ATCGAT 1 cut(s) 1545
Bsu36I CCTNAGG 1 cut(s) 600
BsuRI GGCC 3 cut(s) 304, 521, 1208
BsuTUI ATCGAT 1 cut(s) 1545
BtgZI GCGATG 1 cut(s) 1571
BtsCI GGATG 3 cut(s) 102, 547, 1155
BtsIMutI CAGTG 8 cut(s) 197, 531, 804, 1008, 1659, 1693, 1743, 1761
Cac8I GCNNGC 5 cut(s) 12, 394, 908, 1162, 1351
CfoI GCGC 3 cut(s) 7, 16, 262
Cfr13I GGNCC 5 cut(s) 302, 412, 519, 596, 830
ClaI ATCGAT 1 cut(s) 1545
CseI GACGC 1 cut(s) 466
Csp6I GTAC 6 cut(s) 112, 312, 334, 992, 1375, 1752
CviQI GTAC 6 cut(s) 112, 312, 334, 992, 1375, 1752
DdeI CTNAG 7 cut(s) 162, 167, 345, 555, 585, 600, 846
DinI GGCGCC 1 cut(s) 6
DpnI GATC 8 cut(s) 156, 423, 873, 1263, 1551, 1701, 1713, 1725
DpnII GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
DraI TTTAAA 1 cut(s) 622
Eam1104I CTCTTC 3 cut(s) 531, 929, 1417
EarI CTCTTC 3 cut(s) 531, 929, 1417
EciI GGCGGA 1 cut(s) 63
Eco130I CCWWGG 2 cut(s) 43, 186
Eco32I GATATC 3 cut(s) 665, 1306, 1612
Eco47I GGWCC 3 cut(s) 412, 596, 830
Eco57I CTGAAG 4 cut(s) 555, 953, 1505, 1785
Eco81I CCTNAGG 1 cut(s) 600
Eco88I CYCGRG 1 cut(s) 911
Eco91I GGTNACC 2 cut(s) 401, 1717
EcoO109I RGGNCCY 2 cut(s) 519, 830
EcoO65I GGTNACC 2 cut(s) 401, 1717
EcoRI GAATTC 1 cut(s) 242
EcoRII CCWGG 3 cut(s) 314, 966, 1505
EcoRV GATATC 3 cut(s) 665, 1306, 1612
EcoT14I CCWWGG 2 cut(s) 43, 186
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 43, 186
FaqI GGGAC 1 cut(s) 816
FauI CCCGC 1 cut(s) 401
FauNDI CATATG 1 cut(s) 1273
FbaI TGATCA 1 cut(s) 871
FblI GTMKAC 1 cut(s) 1431
Fnu4HI GCNGC 9 cut(s) 8, 24, 27, 56, 444, 812, 1177, 1180, 1382
FokI GGATG 3 cut(s) 109, 554, 1162
Fsp4HI GCNGC 9 cut(s) 8, 24, 27, 56, 444, 812, 1177, 1180, 1382
FspBI CTAG 1 cut(s) 440
GlaI GCGC 3 cut(s) 6, 15, 261
GluI GCNGC 9 cut(s) 8, 24, 27, 56, 444, 812, 1177, 1180, 1382
GsaI CCCAGC 1 cut(s) 518
GsuI CTGGAG 2 cut(s) 1188, 1528
HaeII RGCGCY 2 cut(s) 8, 17
HaeIII GGCC 3 cut(s) 304, 521, 1208
HapII CCGG 1 cut(s) 305
HgaI GACGC 1 cut(s) 466
HhaI GCGC 3 cut(s) 7, 16, 262
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 5, 14, 260
HinP1I GCGC 3 cut(s) 5, 14, 260
HinfI GANTC 8 cut(s) 87, 319, 367, 581, 817, 1254, 1268, 1405
HpaII CCGG 1 cut(s) 305
HphI GGTGA 6 cut(s) 203, 590, 881, 929, 1703, 1711
Hpy166II GTNNAC 3 cut(s) 194, 1432, 1657
Hpy188I TCNGA 6 cut(s) 75, 154, 346, 586, 1259, 1623
Hpy188III TCNNGA 9 cut(s) 247, 425, 599, 770, 821, 1090, 1167, 1265, 1420
Hpy8I GTNNAC 3 cut(s) 194, 1432, 1657
Hpy99I CGWCG 1 cut(s) 23
HpyAV CCTTC 5 cut(s) 159, 168, 944, 1058, 1198
HpyCH4III ACNGT 3 cut(s) 637, 799, 893
HpyCH4IV ACGT 2 cut(s) 1325, 1666
HpyCH4V TGCA 7 cut(s) 811, 1076, 1160, 1182, 1213, 1277, 1585
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 13, 20, 268, 1101, 1582
HpyF3I CTNAG 7 cut(s) 162, 167, 345, 555, 585, 600, 846
HpySE526I ACGT 2 cut(s) 1325, 1666
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 5, 14, 260
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 871
Kzo9I GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
LmnI GCTCC 4 cut(s) 176, 700, 712, 1358
Lsp1109I GCAGC 7 cut(s) 38, 67, 430, 823, 1163, 1166, 1393
LweI GCATC 2 cut(s) 87, 1594
MaeI CTAG 1 cut(s) 440
MaeII ACGT 2 cut(s) 1325, 1666
MaeIII GTNAC 7 cut(s) 217, 401, 469, 631, 762, 1717, 1741
MalI GATC 8 cut(s) 156, 423, 873, 1263, 1551, 1701, 1713, 1725
MbiI CCGCTC 1 cut(s) 396
MboI GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
MboII GAAGA 8 cut(s) 172, 548, 739, 946, 1108, 1249, 1404, 1795
MfeI CAATTG 1 cut(s) 1463
MhlI GDGCHC 2 cut(s) 1335, 1460
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 3 cut(s) 313, 376, 1277
MmeI TCCRAC 1 cut(s) 761
MseI TTAA 5 cut(s) 353, 621, 789, 1473, 1770
MslI CAYNNNNRTG 3 cut(s) 95, 839, 1571
MspA1I CMGCKG 1 cut(s) 814
MspI CCGG 1 cut(s) 305
MspR9I CCNGG 3 cut(s) 316, 968, 1507
MunI CAATTG 1 cut(s) 1463
Mva1269I GAATGC 1 cut(s) 1019
MvaI CCWGG 3 cut(s) 316, 968, 1507
MwoI GCNNNNNNNGC 6 cut(s) 11, 13, 20, 268, 1101, 1582
NarI GGCGCC 1 cut(s) 5
NdeI CATATG 1 cut(s) 1273
NdeII GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
NlaIV GGNNCC 5 cut(s) 6, 414, 520, 714, 832
NmuCI GTSAC 3 cut(s) 469, 1717, 1741
NspI RCATGY 4 cut(s) 464, 910, 1353, 1438
PaeI GCATGC 2 cut(s) 910, 1353
PaeR7I CTCGAG 1 cut(s) 911
PciI ACATGT 1 cut(s) 1434
PctI GAATGC 1 cut(s) 1019
PfeI GAWTC 5 cut(s) 87, 581, 817, 1254, 1405
PflFI GACNNNGTC 1 cut(s) 322
PkrI GCNGC 9 cut(s) 9, 25, 28, 57, 445, 813, 1178, 1181, 1383
PleI GAGTC 3 cut(s) 313, 375, 1276
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 3 cut(s) 313, 375, 1276
PpuMI RGGWCCY 1 cut(s) 830
PscI ACATGT 1 cut(s) 1434
PshAI GACNNNNGTC 1 cut(s) 461
PshBI ATTAAT 1 cut(s) 789
Psp5II RGGWCCY 1 cut(s) 830
Psp6I CCWGG 3 cut(s) 314, 966, 1505
PspEI GGTNACC 2 cut(s) 401, 1717
PspFI CCCAGC 1 cut(s) 514
PspGI CCWGG 3 cut(s) 314, 966, 1505
PspN4I GGNNCC 5 cut(s) 6, 414, 520, 714, 832
PspPI GGNCC 5 cut(s) 302, 412, 519, 596, 830
PspPPI RGGWCCY 1 cut(s) 830
PspXI VCTCGAGB 1 cut(s) 911
PsyI GACNNNGTC 1 cut(s) 322
PvuII CAGCTG 1 cut(s) 814
RsaI GTAC 6 cut(s) 113, 313, 335, 993, 1376, 1753
RsaNI GTAC 6 cut(s) 112, 312, 334, 992, 1375, 1752
RseI CAYNNNNRTG 3 cut(s) 95, 839, 1571
SaqAI TTAA 5 cut(s) 353, 621, 789, 1473, 1770
SatI GCNGC 9 cut(s) 8, 24, 27, 56, 444, 812, 1177, 1180, 1382
Sau3AI GATC 8 cut(s) 154, 421, 871, 1261, 1549, 1699, 1711, 1723
Sau96I GGNCC 5 cut(s) 302, 412, 519, 596, 830
ScaI AGTACT 1 cut(s) 335
SchI GAGTC 3 cut(s) 313, 376, 1277
ScrFI CCNGG 3 cut(s) 316, 968, 1507
SduI GDGCHC 2 cut(s) 1335, 1460
SfaNI GCATC 2 cut(s) 87, 1594
SfcI CTRYAG 1 cut(s) 863
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 911
SinI GGWCC 3 cut(s) 412, 596, 830
SlaI CTCGAG 1 cut(s) 911
SmiMI CAYNNNNRTG 3 cut(s) 95, 839, 1571
SmlI CTYRAG 3 cut(s) 573, 911, 1370
SmoI CTYRAG 3 cut(s) 573, 911, 1370
SphI GCATGC 2 cut(s) 910, 1353
SsiI CCGC 5 cut(s) 8, 24, 48, 394, 410
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 1319
SspMI CTAG 1 cut(s) 440
StyD4I CCNGG 3 cut(s) 314, 966, 1505
StyI CCWWGG 2 cut(s) 43, 186
TaaI ACNGT 3 cut(s) 637, 799, 893
TaiI ACGT 2 cut(s) 1328, 1669
TaqI TCGA 4 cut(s) 488, 769, 912, 1545
TatI WGTACW 2 cut(s) 333, 991
TauI GCSGC 2 cut(s) 10, 26
TfiI GAWTC 5 cut(s) 87, 581, 817, 1254, 1405
Tru1I TTAA 5 cut(s) 353, 621, 789, 1473, 1770
Tru9I TTAA 5 cut(s) 353, 621, 789, 1473, 1770
TscAI CASTG 8 cut(s) 204, 538, 804, 1008, 1659, 1693, 1750, 1768
TseFI GTSAC 3 cut(s) 469, 1717, 1741
TseI GCWGC 7 cut(s) 26, 55, 443, 811, 1176, 1179, 1381
Tsp45I GTSAC 3 cut(s) 469, 1717, 1741
TspGWI ACGGA 2 cut(s) 109, 1592
TspRI CASTG 8 cut(s) 204, 538, 804, 1008, 1659, 1693, 1750, 1768
Tth111I GACNNNGTC 1 cut(s) 322
VpaK11BI GGWCC 3 cut(s) 412, 596, 830
VspI ATTAAT 1 cut(s) 789
XapI RAATTY 6 cut(s) 125, 242, 755, 885, 1187, 1676
XceI RCATGY 4 cut(s) 464, 910, 1353, 1438
XcmI CCANNNNNNNNNTGG 1 cut(s) 204
XhoI CTCGAG 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 1431
XspI CTAG 1 cut(s) 440
ZrmI AGTACT 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.