MD15G1140200.v1.1

Cleft lip and palate transmembrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0011964
Physical Location & Seq
Reverse (-)
10311017 .. 10318728
7712 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1140200.v1.1.491

Sequence Viewer

Length: 1788 bp
ATGGCGCCGCCAGTGGCAGCGGCAGCGGATGGTCAAGTCCAAGGCGGACAGCAGCAAGGAAGAGGAGGCGGGTTTGGTCAGAGCATCACTGGAATCATACGGATGGCTGTGTTTTGGTACTTCGCTTCCAAATTCTTTTCTCCCAAGAAGGCTCCTTCTGACCCCTCTCAGCTCAGCTCCAATCTCTTCCAAAAGGCTGAACCCCTGGATATGTGGTTGTATATTTCCGAACGTGAAAAGTTCAATGAATTCGGCAGTGAACGTGAACTTGTGTGGCATGAAACTAATATCCCGTATGCTGTCTGGGGGCCAGAGAGTACCCGGACTCTGTCTACAAAGTACTATCCATCTGAGGCCGTAAAGCACAATGGAAGTCTCTATGCTCATGTTTTCTTTGCACGCTCTGGTTACCCTCCAGACCCAACTGATCCGGAATATCAGCCTCTTGCTGCATTTGGAAAGACACACTCTATTGTGACACACCTGCCAAAGTCAAAAGCTGATAAAAAGAGGAGTTTGCTTGGGGGCCCGAAAGATTCTGATGAGAAGGAACCACTTGTTGAGGTAGTTGATGATACTCAAGGTGATTCTGAAGATGATGGTCCTGTGGAGTGGGTATCATATTGGAAACCAAATATTACTATTAATTTGGTTGATGATTTTACACGGTACCCTCATAATGCTGTTCCACCTAATGTTGCCCCTTACTTGAATGTTGAGCCTAGTTCAGGGGACTACTTTCCAACTATTTTCTTCAATGAATTTTGGTTACTTCGAGATAAGTTGATACCAATTAATGAGACGGTGAAAGAATTGCCTCTAAATCTGGAGATAGGTCCCATAAGCATGACCAAATGGCAACTATTCCTGCAGATTGATCAGTCTTTTCAGATTCACTGTAGTTATGGAAGCATGCTCGAGGGTGAGGCTGATGAACTGAAGAGAGTATTCTTGGAAGGAAACCCTTACCTCCTTGTAATCACAATGGTTGTTTCTTTACTTCATTCGGTGTTTGACTTCTTGGCATTCAAGAATGATATTCAATTTTGGAACAAAAATAAATCTATGGAAGGACTATCTGCAAAGTCTGTTATCGTGAGCTTCATATGTCAGCTCATTGTCTTCCTCTATCTACTTGATAATGATACTTCATGGATGATACTTGCAAGTTCTGGAATTGGCTGCTGCATTGAGTTTTGGAAAATTGGGAAGGCCATGCACATAGAGATTGATAGAACCGGGAGGATACCTAAGTTGAGGTTCCGAGACCGTGAGTCATATGCAGGGAATAGGACAAAAGAATATGATGATATGGCAATGAAGTATTTGTCATATGTGCTCTTCTTCCTTGTTGCATGCTCTGCTATTTACTCACTTAAGTACGAGCGTCACAAGAGCTGGTATTCTTGGATTCTGTCTTCACTCACAAGCTGTGTCTACATGTTTGGTTTTATTATGATGTGCCCTCAATTGTTCATTAACTATAAGCTGAAGTCAGTGGCTCATATGCCGTGGAGGCAGATGACATACAAGTTCCTCAACACCATCATTGATGATCTATTTGCCTTCGTCATAAAAATGCCAATGTTACATCGCCTTTCCGTCTTCCGTGATGATGTCATATTTCTGATATACGTATACCAGAGATGGGTCTACCCAGTCGACAAGAAGCGTGTCAATGAATTTGGTTTCAGTGGTGACGATGAGGTCACGGGTGGTGCAGAGATCACGGATGGTGCAGATGTCACTGCTGTTAAGGAAGAAGAAGAGGAGAAGAAAACCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLPTM1

Protein Analysis

596

Amino Acids

68.3

Weight (kDa)

5.6

Isoelectric Point (pI)

40.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLPTM1 PF05602 31 - 461 3.5e-155 Cleft lip and palate transmembrane protein 1 (CLPTM1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011964)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08500 AT5G08500 AT5G23575
fragaria_vesca FvH4_1g25770
malus_domestica MD15G1140200.v1.1
prunus_persica Prupe.4G286100_v2.0.a1
pyrus_communis pycom15g12670 pycom520g00950
rosa_chinensis RchiOBHm_Chr3g0484771
rosa_laevigata RLG00000023204
rosa_multiflora Rmu_sc0001689.1_g000011 Rmu_sc0006653.1_g000006 Rmu_sc0020526.1_g000001
rosa_roxburghii Rroxscaffold_6G00397450
rosa_rugosa Rorug03G0213800
rosa_samantha Rh3BG299200 Rh3CG297000 Rh3DG292800
rosa_wichuraiana Rw3G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 492
AasI GACNNNNNNGTC 1 cut(s) 1706
Acc36I ACCTGC 1 cut(s) 492
Acc65I GGTACC 1 cut(s) 669
AccB1I GGYRCC 2 cut(s) 4, 669
AccI GTMKAC 5 cut(s) 332, 1437, 1638, 1653, 1662
AccIII TCCGGA 1 cut(s) 430
AciI CCGC 5 cut(s) 8, 20, 26, 45, 69
AclWI GGATC 1 cut(s) 422
AcsI RAATTY 4 cut(s) 131, 248, 761, 1682
AcuI CTGAAG 3 cut(s) 612, 959, 1511
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 5 cut(s) 119, 319, 341, 671, 1382
AfiI CCNNNNNNNGG 2 cut(s) 728, 1648
AflII CTTAAG 1 cut(s) 1376
AflIII ACRYGT 1 cut(s) 1440
AgsI TTSAA 5 cut(s) 244, 712, 757, 1030, 1043
AhdI GACNNNNNGTC 1 cut(s) 1273
AjnI CCWGG 1 cut(s) 204
AluBI AGCT 8 cut(s) 172, 177, 500, 1101, 1114, 1398, 1431, 1489
AluI AGCT 8 cut(s) 172, 177, 500, 1101, 1114, 1398, 1431, 1489
Alw21I GWGCWC 1 cut(s) 1341
Alw26I GTCTC 3 cut(s) 380, 794, 1260
AlwI GGATC 1 cut(s) 422
Ama87I CYCGRG 1 cut(s) 917
Aor13HI TCCGGA 1 cut(s) 430
AoxI GGCC 4 cut(s) 308, 354, 526, 1212
ApaI GGGCCC 1 cut(s) 530
ApeKI GCWGC 6 cut(s) 17, 23, 52, 449, 1182, 1185
ApoI RAATTY 4 cut(s) 131, 248, 761, 1682
AseI ATTAAT 2 cut(s) 645, 795
Asp718I GGTACC 1 cut(s) 669
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 5 cut(s) 308, 526, 527, 602, 836
AsuC2I CCSGG 2 cut(s) 322, 1240
AsuHPI GGTGA 4 cut(s) 596, 817, 935, 1709
AvaI CYCGRG 1 cut(s) 917
AvaII GGWCC 2 cut(s) 602, 836
BaeGI GKGCMC 2 cut(s) 530, 1466
BaeI ACNNNNGTAYC 2 cut(s) 1238, 1271
BanI GGYRCC 2 cut(s) 4, 669
BanII GRGCYC 1 cut(s) 530
BbsI GAAGAC 3 cut(s) 1114, 1410, 1597
Bbv12I GWGCWC 1 cut(s) 1341
BbvI GCAGC 6 cut(s) 29, 35, 64, 436, 1169, 1172
BccI CCATC 7 cut(s) 23, 97, 355, 593, 1553, 1641, 1727
BceAI ACGGC 2 cut(s) 341, 1495
BciT130I CCWGG 1 cut(s) 206
BciVI GTATCC 1 cut(s) 1239
BclI TGATCA 1 cut(s) 877
BcnI CCSGG 2 cut(s) 322, 1240
BcoDI GTCTC 3 cut(s) 380, 794, 1260
BfaI CTAG 1 cut(s) 723
BfmI CTRYAG 2 cut(s) 869, 898
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 1376
BfuAI ACCTGC 1 cut(s) 492
BfuI GTATCC 1 cut(s) 1239
BglI GCCNNNNNGGC 1 cut(s) 1516
BisI GCNGC 8 cut(s) 8, 18, 21, 24, 53, 450, 1183, 1186
BlpI GCTNAGC 1 cut(s) 173
BlsI GCNGC 8 cut(s) 9, 19, 22, 25, 54, 451, 1184, 1187
BmcAI AGTACT 1 cut(s) 341
Bme1390I CCNGG 3 cut(s) 206, 322, 1240
Bme18I GGWCC 2 cut(s) 602, 836
BmeRI GACNNNNNGTC 1 cut(s) 1273
BmeT110I CYCGRG 1 cut(s) 917
BmgT120I GGNCC 5 cut(s) 308, 526, 527, 602, 836
BmiI GGNNCC 9 cut(s) 6, 153, 309, 527, 528, 552, 671, 838, 1262
BmrFI CCNGG 3 cut(s) 206, 322, 1240
BmrI ACTGGG 1 cut(s) 1652
BmsI GCATC 1 cut(s) 93
BmuI ACTGGG 1 cut(s) 1652
BpiI GAAGAC 3 cut(s) 1114, 1410, 1597
BpmI CTGGAG 2 cut(s) 399, 848
Bpu1102I GCTNAGC 1 cut(s) 173
BpuEI CTTGAG 1 cut(s) 564
BpuMI CCSGG 2 cut(s) 322, 1240
BsaAI YACGTR 1 cut(s) 1636
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 1260
BsaJI CCNNGG 3 cut(s) 40, 204, 1511
BsaWI WCCGGW 1 cut(s) 430
Bsc4I CCNNNNNNNGG 2 cut(s) 728, 1648
Bse1I ACTGG 3 cut(s) 11, 94, 1658
Bse3DI GCAATG 1 cut(s) 1323
BseAI TCCGGA 1 cut(s) 430
BseBI CCWGG 1 cut(s) 206
BseDI CCNNGG 3 cut(s) 40, 204, 1511
BseGI GGATG 4 cut(s) 34, 108, 1161, 1738
BseLI CCNNNNNNNGG 2 cut(s) 728, 1648
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 3 cut(s) 182, 187, 342
BseNI ACTGG 3 cut(s) 11, 94, 1658
BseRI GAGGAG 3 cut(s) 78, 526, 1784
BseSI GKGCMC 2 cut(s) 530, 1466
BseXI GCAGC 6 cut(s) 29, 35, 64, 436, 1169, 1172
BsgI GTGCAG 2 cut(s) 1740, 1758
BshFI GGCC 4 cut(s) 310, 356, 528, 1214
BshNI GGYRCC 2 cut(s) 4, 669
BsiHKAI GWGCWC 1 cut(s) 1341
BsiHKCI CYCGRG 1 cut(s) 917
BsiSI CCGG 3 cut(s) 322, 431, 1239
BslFI GGGAC 2 cut(s) 746, 822
BslI CCNNNNNNNGG 2 cut(s) 728, 1648
BsmAI GTCTC 3 cut(s) 380, 794, 1260
BsmBI CGTCTC 1 cut(s) 794
BsmFI GGGAC 2 cut(s) 746, 822
BsmI GAATGC 1 cut(s) 1025
BsnI GGCC 4 cut(s) 310, 356, 528, 1214
Bso31I GGTCTC 1 cut(s) 1260
BsoBI CYCGRG 1 cut(s) 917
Bsp120I GGGCCC 1 cut(s) 526
Bsp1286I GDGCHC 3 cut(s) 530, 1341, 1466
Bsp13I TCCGGA 1 cut(s) 430
Bsp143I GATC 4 cut(s) 427, 877, 1555, 1725
Bsp1720I GCTNAGC 1 cut(s) 173
BspACI CCGC 5 cut(s) 8, 20, 26, 45, 69
BspANI GGCC 4 cut(s) 310, 356, 528, 1214
BspCNI CTCAG 3 cut(s) 181, 186, 343
BspEI TCCGGA 1 cut(s) 430
BspLI GGNNCC 9 cut(s) 6, 153, 309, 527, 528, 552, 671, 838, 1262
BspMAI CTGCAG 1 cut(s) 873
BspMI ACCTGC 1 cut(s) 492
BspPI GGATC 1 cut(s) 422
BspQI GCTCTTC 1 cut(s) 1346
BspT107I GGYRCC 2 cut(s) 4, 669
BspTI CTTAAG 1 cut(s) 1376
BspTNI GGTCTC 1 cut(s) 1260
BsrDI GCAATG 1 cut(s) 1323
BsrI ACTGG 3 cut(s) 11, 94, 1658
BssECI CCNNGG 3 cut(s) 40, 204, 1511
BssMI GATC 4 cut(s) 427, 877, 1555, 1725
BssNAI GTATAC 1 cut(s) 1639
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 40
Bst1107I GTATAC 1 cut(s) 1639
Bst2UI CCWGG 1 cut(s) 206
Bst4CI ACNGT 4 cut(s) 669, 805, 899, 1271
Bst6I CTCTTC 5 cut(s) 55, 191, 935, 1346, 1761
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 1376
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstBAI YACGTR 1 cut(s) 1636
BstC8I GCNNGC 3 cut(s) 400, 914, 1357
BstDEI CTNAG 4 cut(s) 168, 173, 351, 1251
BstDSI CCRYGG 1 cut(s) 1511
BstEII GGTNACC 1 cut(s) 407
BstENI CCTNNNNNAGG 1 cut(s) 726
BstF5I GGATG 4 cut(s) 34, 108, 1161, 1738
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 4 cut(s) 430, 880, 1558, 1728
BstMAI GTCTC 3 cut(s) 380, 794, 1260
BstMBI GATC 4 cut(s) 427, 877, 1555, 1725
BstMWI GCNNNNNNNGC 3 cut(s) 23, 1361, 1516
BstNI CCWGG 1 cut(s) 206
BstNSI RCATGY 3 cut(s) 916, 1359, 1444
BstPI GGTNACC 1 cut(s) 407
BstSCI CCNGG 3 cut(s) 204, 320, 1238
BstSFI CTRYAG 2 cut(s) 869, 898
BstSLI GKGCMC 2 cut(s) 530, 1466
BstSNI TACGTA 1 cut(s) 1636
BstV1I GCAGC 6 cut(s) 29, 35, 64, 436, 1169, 1172
BstV2I GAAGAC 3 cut(s) 1114, 1410, 1597
BstZ17I GTATAC 1 cut(s) 1639
BsuI GTATCC 1 cut(s) 1239
BsuRI GGCC 4 cut(s) 310, 356, 528, 1214
BtgI CCRYGG 1 cut(s) 1511
BtgZI GCGATG 1 cut(s) 1577
BtsCI GGATG 4 cut(s) 34, 108, 1161, 1738
BtsI GCAGTG 2 cut(s) 262, 1746
BtsIMutI CAGTG 7 cut(s) 18, 87, 262, 895, 1503, 1699, 1746
BveI ACCTGC 1 cut(s) 492
Cac8I GCNNGC 3 cut(s) 400, 914, 1357
CfoI GCGC 1 cut(s) 7
Cfr13I GGNCC 5 cut(s) 308, 526, 527, 602, 836
CseI GACGC 1 cut(s) 1376
Csp6I GTAC 5 cut(s) 118, 318, 340, 670, 1381
CviAII CATG 8 cut(s) 278, 386, 847, 913, 1152, 1216, 1356, 1441
CviQI GTAC 5 cut(s) 118, 318, 340, 670, 1381
DdeI CTNAG 4 cut(s) 168, 173, 351, 1251
DinI GGCGCC 1 cut(s) 6
DpnI GATC 4 cut(s) 429, 879, 1557, 1727
DpnII GATC 4 cut(s) 427, 877, 1555, 1725
DrdI GACNNNNNNGTC 1 cut(s) 1706
DriI GACNNNNNGTC 1 cut(s) 1273
DseDI GACNNNNNNGTC 1 cut(s) 1706
Eam1104I CTCTTC 5 cut(s) 55, 191, 935, 1346, 1761
Eam1105I GACNNNNNGTC 1 cut(s) 1273
EarI CTCTTC 5 cut(s) 55, 191, 935, 1346, 1761
EciI GGCGGA 1 cut(s) 60
Eco105I TACGTA 1 cut(s) 1636
Eco130I CCWWGG 1 cut(s) 40
Eco24I GRGCYC 1 cut(s) 530
Eco31I GGTCTC 1 cut(s) 1260
Eco47I GGWCC 2 cut(s) 602, 836
Eco57I CTGAAG 3 cut(s) 612, 959, 1511
Eco88I CYCGRG 1 cut(s) 917
Eco91I GGTNACC 1 cut(s) 407
EcoNI CCTNNNNNAGG 1 cut(s) 726
EcoO109I RGGNCCY 2 cut(s) 526, 836
EcoO65I GGTNACC 1 cut(s) 407
EcoRI GAATTC 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 204
EcoT14I CCWWGG 1 cut(s) 40
EcoT38I GRGCYC 1 cut(s) 530
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 40
Esp3I CGTCTC 1 cut(s) 794
FaeI CATG 8 cut(s) 281, 389, 850, 916, 1155, 1219, 1359, 1444
FaqI GGGAC 2 cut(s) 746, 822
FatI CATG 8 cut(s) 277, 385, 846, 912, 1151, 1215, 1355, 1440
FauI CCCGC 1 cut(s) 62
FauNDI CATATG 4 cut(s) 1106, 1279, 1333, 1506
FbaI TGATCA 1 cut(s) 877
FblI GTMKAC 5 cut(s) 332, 1437, 1638, 1653, 1662
Fnu4HI GCNGC 8 cut(s) 8, 18, 21, 24, 53, 450, 1183, 1186
FokI GGATG 4 cut(s) 41, 115, 1168, 1745
FriOI GRGCYC 1 cut(s) 530
Fsp4HI GCNGC 8 cut(s) 8, 18, 21, 24, 53, 450, 1183, 1186
FspBI CTAG 1 cut(s) 723
GlaI GCGC 1 cut(s) 6
GluI GCNGC 8 cut(s) 8, 18, 21, 24, 53, 450, 1183, 1186
GsuI CTGGAG 2 cut(s) 399, 848
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 4 cut(s) 310, 356, 528, 1214
HapII CCGG 3 cut(s) 322, 431, 1239
HgaI GACGC 1 cut(s) 1376
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 8 cut(s) 281, 389, 850, 916, 1155, 1219, 1359, 1444
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 1663
HindII GTYRAC 1 cut(s) 1663
HinfI GANTC 7 cut(s) 93, 325, 536, 587, 892, 1274, 1411
HpaII CCGG 3 cut(s) 322, 431, 1239
HphI GGTGA 4 cut(s) 596, 817, 935, 1709
Hpy166II GTNNAC 7 cut(s) 260, 266, 333, 1438, 1639, 1654, 1663
Hpy188I TCNGA 9 cut(s) 81, 160, 229, 352, 541, 592, 891, 1265, 1629
Hpy188III TCNNGA 7 cut(s) 416, 431, 776, 827, 1030, 1096, 1173
Hpy8I GTNNAC 7 cut(s) 260, 266, 333, 1438, 1639, 1654, 1663
HpyAV CCTTC 7 cut(s) 142, 165, 541, 950, 1064, 1204, 1576
HpyCH4III ACNGT 4 cut(s) 669, 805, 899, 1271
HpyCH4IV ACGT 3 cut(s) 232, 262, 1635
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 1361, 1516
HpyF3I CTNAG 4 cut(s) 168, 173, 351, 1251
HpySE526I ACGT 3 cut(s) 232, 262, 1635
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 8 cut(s) 281, 389, 850, 916, 1155, 1219, 1359, 1444
HspAI GCGC 1 cut(s) 5
KasI GGCGCC 1 cut(s) 4
Kpn2I TCCGGA 1 cut(s) 430
KpnI GGTACC 1 cut(s) 673
Ksp22I TGATCA 1 cut(s) 877
Kzo9I GATC 4 cut(s) 427, 877, 1555, 1725
LguI GCTCTTC 1 cut(s) 1346
LmnI GCTCC 2 cut(s) 157, 182
Lsp1109I GCAGC 6 cut(s) 29, 35, 64, 436, 1169, 1172
LweI GCATC 1 cut(s) 93
MaeI CTAG 1 cut(s) 723
MaeII ACGT 3 cut(s) 232, 262, 1635
MaeIII GTNAC 8 cut(s) 407, 475, 768, 1388, 1587, 1697, 1708, 1744
MalI GATC 4 cut(s) 429, 879, 1557, 1727
MboI GATC 4 cut(s) 427, 877, 1555, 1725
MfeI CAATTG 1 cut(s) 1469
MhlI GDGCHC 3 cut(s) 530, 1341, 1466
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 2 cut(s) 319, 1283
MmeI TCCRAC 1 cut(s) 767
MroI TCCGGA 1 cut(s) 430
MseI TTAA 5 cut(s) 645, 795, 1377, 1479, 1755
MslI CAYNNNNRTG 3 cut(s) 101, 845, 1577
MspA1I CMGCKG 2 cut(s) 20, 26
MspCI CTTAAG 1 cut(s) 1376
MspI CCGG 3 cut(s) 322, 431, 1239
MspR9I CCNGG 3 cut(s) 206, 322, 1240
MunI CAATTG 1 cut(s) 1469
Mva1269I GAATGC 1 cut(s) 1025
MvaI CCWGG 1 cut(s) 206
MwoI GCNNNNNNNGC 3 cut(s) 23, 1361, 1516
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 2 cut(s) 322, 1240
NdeI CATATG 4 cut(s) 1106, 1279, 1333, 1506
NdeII GATC 4 cut(s) 427, 877, 1555, 1725
NlaIII CATG 8 cut(s) 281, 389, 850, 916, 1155, 1219, 1359, 1444
NlaIV GGNNCC 9 cut(s) 6, 153, 309, 527, 528, 552, 671, 838, 1262
NmuCI GTSAC 5 cut(s) 475, 1388, 1697, 1708, 1744
NspI RCATGY 3 cut(s) 916, 1359, 1444
PaeI GCATGC 2 cut(s) 916, 1359
PaeR7I CTCGAG 1 cut(s) 917
PaqCI CACCTGC 1 cut(s) 492
PciI ACATGT 1 cut(s) 1440
PciSI GCTCTTC 1 cut(s) 1346
PctI GAATGC 1 cut(s) 1025
PfeI GAWTC 5 cut(s) 93, 536, 587, 892, 1411
PflFI GACNNNGTC 1 cut(s) 328
PkrI GCNGC 8 cut(s) 9, 19, 22, 25, 54, 451, 1184, 1187
PleI GAGTC 2 cut(s) 319, 1282
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 2 cut(s) 319, 1282
Ppu21I YACGTR 1 cut(s) 1636
PpuMI RGGWCCY 1 cut(s) 836
PscI ACATGT 1 cut(s) 1440
PshBI ATTAAT 2 cut(s) 645, 795
Psp5II RGGWCCY 1 cut(s) 836
Psp6I CCWGG 1 cut(s) 204
PspEI GGTNACC 1 cut(s) 407
PspGI CCWGG 1 cut(s) 204
PspN4I GGNNCC 9 cut(s) 6, 153, 309, 527, 528, 552, 671, 838, 1262
PspOMI GGGCCC 1 cut(s) 526
PspPI GGNCC 5 cut(s) 308, 526, 527, 602, 836
PspPPI RGGWCCY 1 cut(s) 836
PspXI VCTCGAGB 1 cut(s) 917
PstI CTGCAG 1 cut(s) 873
PsyI GACNNNGTC 1 cut(s) 328
RsaI GTAC 5 cut(s) 119, 319, 341, 671, 1382
RsaNI GTAC 5 cut(s) 118, 318, 340, 670, 1381
RseI CAYNNNNRTG 3 cut(s) 101, 845, 1577
SalI GTCGAC 1 cut(s) 1661
SapI GCTCTTC 1 cut(s) 1346
SaqAI TTAA 5 cut(s) 645, 795, 1377, 1479, 1755
SatI GCNGC 8 cut(s) 8, 18, 21, 24, 53, 450, 1183, 1186
Sau3AI GATC 4 cut(s) 427, 877, 1555, 1725
Sau96I GGNCC 5 cut(s) 308, 526, 527, 602, 836
ScaI AGTACT 1 cut(s) 341
SchI GAGTC 2 cut(s) 319, 1283
ScrFI CCNGG 3 cut(s) 206, 322, 1240
SduI GDGCHC 3 cut(s) 530, 1341, 1466
SfaNI GCATC 1 cut(s) 93
SfcI CTRYAG 2 cut(s) 869, 898
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 917
SinI GGWCC 2 cut(s) 602, 836
SlaI CTCGAG 1 cut(s) 917
SmiMI CAYNNNNRTG 3 cut(s) 101, 845, 1577
SmlI CTYRAG 3 cut(s) 579, 917, 1376
SmoI CTYRAG 3 cut(s) 579, 917, 1376
SnaBI TACGTA 1 cut(s) 1636
SphI GCATGC 2 cut(s) 916, 1359
SsiI CCGC 5 cut(s) 8, 20, 26, 45, 69
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 637
SspMI CTAG 1 cut(s) 723
StyD4I CCNGG 3 cut(s) 204, 320, 1238
StyI CCWWGG 1 cut(s) 40
TaaI ACNGT 4 cut(s) 669, 805, 899, 1271
TaiI ACGT 3 cut(s) 235, 265, 1638
TaqI TCGA 3 cut(s) 775, 918, 1662
TatI WGTACW 1 cut(s) 339
TauI GCSGC 2 cut(s) 10, 23
TfiI GAWTC 5 cut(s) 93, 536, 587, 892, 1411
Tru1I TTAA 5 cut(s) 645, 795, 1377, 1479, 1755
Tru9I TTAA 5 cut(s) 645, 795, 1377, 1479, 1755
TscAI CASTG 7 cut(s) 18, 94, 262, 902, 1503, 1699, 1753
TseFI GTSAC 5 cut(s) 475, 1388, 1697, 1708, 1744
TseI GCWGC 6 cut(s) 17, 23, 52, 449, 1182, 1185
Tsp45I GTSAC 5 cut(s) 475, 1388, 1697, 1708, 1744
TspGWI ACGGA 4 cut(s) 115, 1591, 1598, 1745
TspRI CASTG 7 cut(s) 18, 94, 262, 902, 1503, 1699, 1753
Tth111I GACNNNGTC 1 cut(s) 328
Vha464I CTTAAG 1 cut(s) 1376
VpaK11BI GGWCC 2 cut(s) 602, 836
VspI ATTAAT 2 cut(s) 645, 795
XagI CCTNNNNNAGG 1 cut(s) 726
XapI RAATTY 4 cut(s) 131, 248, 761, 1682
XceI RCATGY 3 cut(s) 916, 1359, 1444
XhoI CTCGAG 1 cut(s) 917
XmiI GTMKAC 5 cut(s) 332, 1437, 1638, 1653, 1662
XspI CTAG 1 cut(s) 723
ZrmI AGTACT 1 cut(s) 341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.