Rw3G023560

Cleft lip and palate transmembrane protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0011964
Physical Location & Seq
Reverse (-)
29538103 .. 29546597
8495 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G023560.1

Sequence Viewer

Length: 1794 bp
ATGGCGCCGCCAGCGCCAGTCGCCGCCGCAGCCGCAGCAGGTGGGCAAGTCCAAGCCGGACCGCAGCAAGGAGGGATTGGTCAGAGCATCGGTGGAATCATACGGATGGCTGTGATTTGGTACTTCGCTTCCAAATTCTTTTCCTCCTCCAAAAAGCCTTCTGATCCTTCTCAGCTCATCTCCAATATCTTCCCCAAGGGTGAACCACTGGATATGTGGTTCTATATTACTGAACATGAGAAGTTCAATGAATTCGGGAGTGAAAGCGCGCTTGTATGGCATGAAACTAATATCCCCTACGCTACCTATGGGCCGGAGAGTACCAGGACTCTGTCTATGAAGTACTATCCATCTGAGGCATTAAAGCACAATGGGAGTCTCTATGCTCATGTTTTCTTTGCCCGCTCTGGTTACCCTGCGGACCCAAATGATCCAGAGTATCTGCCTCTAGCTGCGTTTGGAAAGACGCATGTCATTGTGACACACTTGCCCAAGTCGAAAGCTGGTAAAAAGAGGAGTTTGCTGGGGGCCTCAAAAGACACTGAAGAGGATGCAAAAATTGCTGAGGTGGTTGATGATACTCAAGGTGATTCTGAGGATAATGGTCCTGAGGAGTGGGTATCATACTTTAAACCAAATGTTACTGTCAATTTGGTTGATGATTTTACCCGATATCCTCATAATGCTGTTCCACCCAATGTTGCTCCTTACTTGAATGTGGAGCCTAATTCTGGCAATTACTTTCCAACCATTTTCTTCAACGAATTTTGGTTACTTCGAGATAAGTTGATACCAATTAATGAAACAGTGAAAGAATTGCAGCTGAATCTGGAAGTAGGTCCCATAAGCATGACTAAGTGGCAACTATTCCTACAGATTGATCAGTCTTTCCAAATTCACCGTAGTTATGGAAGCATGCTCGAGGGTGAGGCTGATGAACTGAAGAGAGTATTCTTGGAAGGAAATCCTTACCTCCTGGCAATCACTATGGCTGTTTCTGTACTTCATTCAGTGTTTGACTTCTTGGCATTCAAAAACGATATTCAGTTTTGGAACAAAAATAAGTCTATGGAAGGGCTGTCTGCAAAGTCTGTTGTCGTGAGCTTCATAAGCCAGTTCATTATCTTCCTCTATCTACTTGATAATGACACTTCATGGATGATACTTGCAAGCTCTGGAGTTGGCTGCTGCATTGAATTTTGGAAAATTGGGAAGGCCATGCACATAGAGATTGATAGAAGTGGGAAGATACCAATGTTGAGATTCCGAGATCGTGAGTCATATGCAGGGAATAAGACAAAGGAATATGATGATATCGCAATGAAATATTTGACGTATGTGCTCTTGTTCCTTGTCGCATGCTCCTCTATTTATTCACTCAAGTACGAGCAGCACAAGAGCTGGTATTCTTGGATTCTCTCTTCATTCACGAGCTGTGTCTACATGTTCGGTTTTATTATGATGTGCCCTCAATTGTTCATTAACTATAAGCTGAAGTCGGTAGCTCATCTACCCTGGAGACAGATGACTTACAAGTTCCTCAACACCATCATCGATGATCTATTTGCTTTTGTCATAAAAATGCCAATGTTGCATCGCCTTTCTGTGTTCCGTGATGATATCATATTTCTGATATACATATACCAGAGATGGGTCTATCCAGTGGACAAAAAACGTGTAAATGAATTTGGTTTCAGTGGTGAAGCCGATCAGGTCACCGATCAGGTCATTGAACAGGTCACTGATGGTACAGACGACACTGAAGTTAAGCAAGAAGCGAAGAAAACCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CLPTM1

Protein Analysis

597

Amino Acids

68.12

Weight (kDa)

5.79

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CLPTM1 PF05602 33 - 462 1.8e-150 Cleft lip and palate transmembrane protein 1 (CLPTM1)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011964)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G08500 AT5G08500 AT5G23575
fragaria_vesca FvH4_1g25770
malus_domestica MD15G1140200.v1.1
prunus_persica Prupe.4G286100_v2.0.a1
pyrus_communis pycom15g12670 pycom520g00950
rosa_chinensis RchiOBHm_Chr3g0484771
rosa_laevigata RLG00000023204
rosa_multiflora Rmu_sc0001689.1_g000011 Rmu_sc0006653.1_g000006 Rmu_sc0020526.1_g000001
rosa_roxburghii Rroxscaffold_6G00397450
rosa_rugosa Rorug03G0213800
rosa_samantha Rh3BG299200 Rh3CG297000 Rh3DG292800
rosa_wichuraiana Rw3G023560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 29
Acc36I ACCTGC 1 cut(s) 29
AccB1I GGYRCC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 405
AccI GTMKAC 1 cut(s) 1440
AccII CGCG 1 cut(s) 269
AciI CCGC 7 cut(s) 8, 24, 27, 33, 62, 403, 419
AclWI GGATC 2 cut(s) 158, 425
AcsI RAATTY 6 cut(s) 134, 251, 764, 894, 1196, 1685
AcuI CTGAAG 4 cut(s) 564, 962, 1514, 1782
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 6 cut(s) 122, 322, 344, 1002, 1385, 1750
AfiI CCNNNNNNNGG 3 cut(s) 68, 731, 1651
AflIII ACRYGT 2 cut(s) 1443, 1675
AgsI TTSAA 6 cut(s) 247, 715, 760, 1033, 1196, 1733
AjnI CCWGG 3 cut(s) 323, 975, 1514
AloI GAACNNNNNNTCC 2 cut(s) 203, 235
Alw21I GWGCWC 1 cut(s) 1344
Alw26I GTCTC 2 cut(s) 383, 1513
AlwI GGATC 2 cut(s) 158, 425
Ama87I CYCGRG 1 cut(s) 920
AoxI GGCC 3 cut(s) 311, 528, 1215
ApeKI GCWGC 8 cut(s) 29, 35, 64, 452, 820, 1185, 1188, 1390
ApoI RAATTY 6 cut(s) 134, 251, 764, 894, 1196, 1685
AseI ATTAAT 1 cut(s) 798
AspLEI GCGC 4 cut(s) 7, 16, 269, 271
AspS9I GGNCC 6 cut(s) 59, 311, 421, 528, 605, 839
AsuHPI GGTGA 6 cut(s) 212, 599, 890, 938, 1708, 1712
AvaI CYCGRG 1 cut(s) 920
AvaII GGWCC 4 cut(s) 59, 421, 605, 839
AxyI CCTNAGG 1 cut(s) 609
BaeGI GKGCMC 1 cut(s) 1469
BaeI ACNNNNGTAYC 2 cut(s) 1241, 1274
BanI GGYRCC 1 cut(s) 4
BauI CACGAG 1 cut(s) 1429
Bbv12I GWGCWC 1 cut(s) 1344
BbvCI CCTCAGC 1 cut(s) 564
BbvI GCAGC 8 cut(s) 41, 47, 76, 439, 832, 1172, 1175, 1402
BccI CCATC 5 cut(s) 100, 358, 1556, 1644, 1739
BciT130I CCWGG 3 cut(s) 325, 977, 1516
BclI TGATCA 1 cut(s) 880
BcoDI GTCTC 2 cut(s) 383, 1513
BfaI CTAG 1 cut(s) 449
BfmI CTRYAG 1 cut(s) 872
BfoI RGCGCY 2 cut(s) 8, 17
BfuAI ACCTGC 1 cut(s) 29
BmcAI AGTACT 1 cut(s) 344
Bme1390I CCNGG 3 cut(s) 325, 977, 1516
Bme18I GGWCC 4 cut(s) 59, 421, 605, 839
BmeT110I CYCGRG 1 cut(s) 920
BmgT120I GGNCC 6 cut(s) 59, 311, 421, 528, 605, 839
BmiI GGNNCC 5 cut(s) 6, 423, 529, 723, 841
BmrFI CCNGG 3 cut(s) 325, 977, 1516
BmsI GCATC 3 cut(s) 96, 541, 1603
BoxI GACNNNNGTC 1 cut(s) 470
BpmI CTGGAG 2 cut(s) 1197, 1537
Bpu10I CCTNAGC 1 cut(s) 564
BpuEI CTTGAG 2 cut(s) 567, 1364
Bsa29I ATCGAT 1 cut(s) 1554
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 2 cut(s) 195, 1514
Bsc4I CCNNNNNNNGG 3 cut(s) 68, 731, 1651
Bse1I ACTGG 4 cut(s) 17, 213, 1114, 1661
Bse21I CCTNAGG 1 cut(s) 609
Bse3DI GCAATG 1 cut(s) 1326
BseBI CCWGG 3 cut(s) 325, 977, 1516
BseCI ATCGAT 1 cut(s) 1554
BseDI CCNNGG 2 cut(s) 195, 1514
BseGI GGATG 3 cut(s) 111, 556, 1164
BseLI CCNNNNNNNGG 3 cut(s) 68, 731, 1651
BseMI GCAATG 1 cut(s) 1326
BseMII CTCAG 5 cut(s) 185, 345, 555, 585, 600
BseNI ACTGG 4 cut(s) 17, 213, 1114, 1661
BsePI GCGCGC 1 cut(s) 267
BseRI GAGGAG 4 cut(s) 136, 529, 626, 1354
BseSI GKGCMC 1 cut(s) 1469
BseXI GCAGC 8 cut(s) 41, 47, 76, 439, 832, 1172, 1175, 1402
BseYI CCCAGC 1 cut(s) 523
Bsh1236I CGCG 1 cut(s) 269
BshFI GGCC 3 cut(s) 313, 530, 1217
BshNI GGYRCC 1 cut(s) 4
BshVI ATCGAT 1 cut(s) 1554
BsiHKAI GWGCWC 1 cut(s) 1344
BsiHKCI CYCGRG 1 cut(s) 920
BsiSI CCGG 2 cut(s) 57, 314
BslFI GGGAC 1 cut(s) 825
BslI CCNNNNNNNGG 3 cut(s) 68, 731, 1651
BsmAI GTCTC 2 cut(s) 383, 1513
BsmFI GGGAC 1 cut(s) 825
BsmI GAATGC 1 cut(s) 1028
BsnI GGCC 3 cut(s) 313, 530, 1217
BsoBI CYCGRG 1 cut(s) 920
Bsp1286I GDGCHC 2 cut(s) 1344, 1469
Bsp143I GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
BspACI CCGC 7 cut(s) 8, 24, 27, 33, 62, 403, 419
BspANI GGCC 3 cut(s) 313, 530, 1217
BspCNI CTCAG 5 cut(s) 184, 346, 556, 586, 601
BspDI ATCGAT 1 cut(s) 1554
BspFNI CGCG 1 cut(s) 269
BspLI GGNNCC 5 cut(s) 6, 423, 529, 723, 841
BspMI ACCTGC 1 cut(s) 29
BspPI GGATC 2 cut(s) 158, 425
BspT107I GGYRCC 1 cut(s) 4
BsrBI CCGCTC 1 cut(s) 405
BsrDI GCAATG 1 cut(s) 1326
BsrI ACTGG 4 cut(s) 17, 213, 1114, 1661
BssECI CCNNGG 2 cut(s) 195, 1514
BssHII GCGCGC 1 cut(s) 267
BssMI GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1429
BssT1I CCWWGG 1 cut(s) 195
Bst2BI CACGAG 1 cut(s) 1429
Bst2UI CCWGG 3 cut(s) 325, 977, 1516
Bst4CI ACNGT 3 cut(s) 646, 808, 902
Bst6I CTCTTC 3 cut(s) 540, 938, 1426
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 560
BstC8I GCNNGC 6 cut(s) 12, 269, 403, 917, 1171, 1360
BstDEI CTNAG 6 cut(s) 171, 354, 564, 594, 609, 855
BstEII GGTNACC 2 cut(s) 410, 1714
BstF5I GGATG 3 cut(s) 111, 556, 1164
BstFNI CGCG 1 cut(s) 269
BstH2I RGCGCY 2 cut(s) 8, 17
BstHHI GCGC 4 cut(s) 7, 16, 269, 271
BstKTI GATC 7 cut(s) 166, 433, 883, 1273, 1561, 1711, 1723
BstMAI GTCTC 2 cut(s) 383, 1513
BstMBI GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
BstNI CCWGG 3 cut(s) 325, 977, 1516
BstNSI RCATGY 4 cut(s) 473, 919, 1362, 1447
BstPAI GACNNNNGTC 1 cut(s) 470
BstPI GGTNACC 2 cut(s) 410, 1714
BstSCI CCNGG 3 cut(s) 323, 975, 1514
BstSFI CTRYAG 1 cut(s) 872
BstSLI GKGCMC 1 cut(s) 1469
BstUI CGCG 1 cut(s) 269
BstV1I GCAGC 8 cut(s) 41, 47, 76, 439, 832, 1172, 1175, 1402
Bsu15I ATCGAT 1 cut(s) 1554
Bsu36I CCTNAGG 1 cut(s) 609
BsuRI GGCC 3 cut(s) 313, 530, 1217
BsuTUI ATCGAT 1 cut(s) 1554
BtgZI GCGATG 1 cut(s) 1580
BtsCI GGATG 3 cut(s) 111, 556, 1164
BtsIMutI CAGTG 8 cut(s) 206, 540, 813, 1017, 1668, 1702, 1740, 1758
BveI ACCTGC 1 cut(s) 29
Cac8I GCNNGC 6 cut(s) 12, 269, 403, 917, 1171, 1360
CfoI GCGC 4 cut(s) 7, 16, 269, 271
Cfr13I GGNCC 6 cut(s) 59, 311, 421, 528, 605, 839
ClaI ATCGAT 1 cut(s) 1554
CpoI CGGWCCG 1 cut(s) 59
CseI GACGC 1 cut(s) 475
Csp6I GTAC 6 cut(s) 121, 321, 343, 1001, 1384, 1749
CspI CGGWCCG 1 cut(s) 59
CviQI GTAC 6 cut(s) 121, 321, 343, 1001, 1384, 1749
DdeI CTNAG 6 cut(s) 171, 354, 564, 594, 609, 855
DinI GGCGCC 1 cut(s) 6
DpnI GATC 7 cut(s) 165, 432, 882, 1272, 1560, 1710, 1722
DpnII GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
DraI TTTAAA 1 cut(s) 631
Eam1104I CTCTTC 3 cut(s) 540, 938, 1426
EarI CTCTTC 3 cut(s) 540, 938, 1426
Eco130I CCWWGG 1 cut(s) 195
Eco32I GATATC 3 cut(s) 674, 1315, 1621
Eco47I GGWCC 4 cut(s) 59, 421, 605, 839
Eco57I CTGAAG 4 cut(s) 564, 962, 1514, 1782
Eco81I CCTNAGG 1 cut(s) 609
Eco88I CYCGRG 1 cut(s) 920
Eco91I GGTNACC 2 cut(s) 410, 1714
EcoO109I RGGNCCY 2 cut(s) 528, 839
EcoO65I GGTNACC 2 cut(s) 410, 1714
EcoRI GAATTC 1 cut(s) 251
EcoRII CCWGG 3 cut(s) 323, 975, 1514
EcoRV GATATC 3 cut(s) 674, 1315, 1621
EcoT14I CCWWGG 1 cut(s) 195
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 195
FaqI GGGAC 1 cut(s) 825
FauI CCCGC 1 cut(s) 410
FauNDI CATATG 1 cut(s) 1282
FbaI TGATCA 1 cut(s) 880
FblI GTMKAC 1 cut(s) 1440
FokI GGATG 3 cut(s) 118, 563, 1171
FspBI CTAG 1 cut(s) 449
GlaI GCGC 4 cut(s) 6, 15, 268, 270
GsaI CCCAGC 1 cut(s) 527
GsuI CTGGAG 2 cut(s) 1197, 1537
HaeII RGCGCY 2 cut(s) 8, 17
HaeIII GGCC 3 cut(s) 313, 530, 1217
HapII CCGG 2 cut(s) 57, 314
HgaI GACGC 1 cut(s) 475
HhaI GCGC 4 cut(s) 7, 16, 269, 271
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 4 cut(s) 5, 14, 267, 269
HinP1I GCGC 4 cut(s) 5, 14, 267, 269
HinfI GANTC 8 cut(s) 96, 328, 376, 590, 826, 1263, 1277, 1414
HpaII CCGG 2 cut(s) 57, 314
HphI GGTGA 6 cut(s) 212, 599, 890, 938, 1708, 1712
Hpy166II GTNNAC 3 cut(s) 203, 1441, 1666
Hpy188I TCNGA 6 cut(s) 84, 163, 355, 595, 1268, 1632
Hpy188III TCNNGA 9 cut(s) 256, 434, 608, 779, 830, 1099, 1176, 1274, 1429
Hpy8I GTNNAC 3 cut(s) 203, 1441, 1666
HpyAV CCTTC 5 cut(s) 168, 177, 953, 1067, 1207
HpyCH4III ACNGT 3 cut(s) 646, 808, 902
HpyCH4IV ACGT 2 cut(s) 1334, 1675
HpyCH4V TGCA 8 cut(s) 554, 820, 1085, 1169, 1191, 1222, 1286, 1594
HpyF3I CTNAG 6 cut(s) 171, 354, 564, 594, 609, 855
HpySE526I ACGT 2 cut(s) 1334, 1675
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 4 cut(s) 5, 14, 267, 269
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 880
Kzo9I GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
LmnI GCTCC 3 cut(s) 709, 721, 1367
Lsp1109I GCAGC 8 cut(s) 41, 47, 76, 439, 832, 1172, 1175, 1402
LweI GCATC 3 cut(s) 96, 541, 1603
MaeI CTAG 1 cut(s) 449
MaeII ACGT 2 cut(s) 1334, 1675
MaeIII GTNAC 6 cut(s) 410, 478, 640, 771, 1714, 1738
MalI GATC 7 cut(s) 165, 432, 882, 1272, 1560, 1710, 1722
MbiI CCGCTC 1 cut(s) 405
MboI GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
MboII GAAGA 8 cut(s) 181, 557, 748, 955, 1117, 1258, 1413, 1792
MfeI CAATTG 1 cut(s) 1472
MhlI GDGCHC 2 cut(s) 1344, 1469
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 3 cut(s) 322, 385, 1286
MmeI TCCRAC 1 cut(s) 770
MseI TTAA 5 cut(s) 362, 630, 798, 1482, 1767
MslI CAYNNNNRTG 3 cut(s) 104, 848, 1580
MspA1I CMGCKG 1 cut(s) 823
MspI CCGG 2 cut(s) 57, 314
MspR9I CCNGG 3 cut(s) 325, 977, 1516
MunI CAATTG 1 cut(s) 1472
Mva1269I GAATGC 1 cut(s) 1028
MvaI CCWGG 3 cut(s) 325, 977, 1516
MvnI CGCG 1 cut(s) 269
NarI GGCGCC 1 cut(s) 5
NdeI CATATG 1 cut(s) 1282
NdeII GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
NlaIV GGNNCC 5 cut(s) 6, 423, 529, 723, 841
NmuCI GTSAC 3 cut(s) 478, 1714, 1738
NspI RCATGY 4 cut(s) 473, 919, 1362, 1447
PaeI GCATGC 2 cut(s) 919, 1362
PaeR7I CTCGAG 1 cut(s) 920
PaqCI CACCTGC 1 cut(s) 29
PauI GCGCGC 1 cut(s) 267
PciI ACATGT 1 cut(s) 1443
PctI GAATGC 1 cut(s) 1028
PfeI GAWTC 5 cut(s) 96, 590, 826, 1263, 1414
PflFI GACNNNGTC 1 cut(s) 331
PleI GAGTC 3 cut(s) 322, 384, 1285
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 3 cut(s) 322, 384, 1285
PpuMI RGGWCCY 1 cut(s) 839
PscI ACATGT 1 cut(s) 1443
PshAI GACNNNNGTC 1 cut(s) 470
PshBI ATTAAT 1 cut(s) 798
Psp5II RGGWCCY 1 cut(s) 839
Psp6I CCWGG 3 cut(s) 323, 975, 1514
PspEI GGTNACC 2 cut(s) 410, 1714
PspFI CCCAGC 1 cut(s) 523
PspGI CCWGG 3 cut(s) 323, 975, 1514
PspN4I GGNNCC 5 cut(s) 6, 423, 529, 723, 841
PspPI GGNCC 6 cut(s) 59, 311, 421, 528, 605, 839
PspPPI RGGWCCY 1 cut(s) 839
PspXI VCTCGAGB 1 cut(s) 920
PsyI GACNNNGTC 1 cut(s) 331
PteI GCGCGC 1 cut(s) 267
PvuII CAGCTG 1 cut(s) 823
RsaI GTAC 6 cut(s) 122, 322, 344, 1002, 1385, 1750
RsaNI GTAC 6 cut(s) 121, 321, 343, 1001, 1384, 1749
RseI CAYNNNNRTG 3 cut(s) 104, 848, 1580
Rsr2I CGGWCCG 1 cut(s) 59
RsrII CGGWCCG 1 cut(s) 59
SaqAI TTAA 5 cut(s) 362, 630, 798, 1482, 1767
Sau3AI GATC 7 cut(s) 163, 430, 880, 1270, 1558, 1708, 1720
Sau96I GGNCC 6 cut(s) 59, 311, 421, 528, 605, 839
ScaI AGTACT 1 cut(s) 344
SchI GAGTC 3 cut(s) 322, 385, 1286
ScrFI CCNGG 3 cut(s) 325, 977, 1516
SduI GDGCHC 2 cut(s) 1344, 1469
SfaNI GCATC 3 cut(s) 96, 541, 1603
SfcI CTRYAG 1 cut(s) 872
SfoI GGCGCC 1 cut(s) 6
Sfr274I CTCGAG 1 cut(s) 920
SinI GGWCC 4 cut(s) 59, 421, 605, 839
SlaI CTCGAG 1 cut(s) 920
SmiMI CAYNNNNRTG 3 cut(s) 104, 848, 1580
SmlI CTYRAG 3 cut(s) 582, 920, 1379
SmoI CTYRAG 3 cut(s) 582, 920, 1379
SphI GCATGC 2 cut(s) 919, 1362
SsiI CCGC 7 cut(s) 8, 24, 27, 33, 62, 403, 419
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 1328
SspMI CTAG 1 cut(s) 449
StyD4I CCNGG 3 cut(s) 323, 975, 1514
StyI CCWWGG 1 cut(s) 195
TaaI ACNGT 3 cut(s) 646, 808, 902
TaiI ACGT 2 cut(s) 1337, 1678
TaqI TCGA 4 cut(s) 497, 778, 921, 1554
TatI WGTACW 2 cut(s) 342, 1000
TauI GCSGC 4 cut(s) 10, 26, 29, 35
TfiI GAWTC 5 cut(s) 96, 590, 826, 1263, 1414
Tru1I TTAA 5 cut(s) 362, 630, 798, 1482, 1767
Tru9I TTAA 5 cut(s) 362, 630, 798, 1482, 1767
TscAI CASTG 8 cut(s) 213, 547, 813, 1017, 1668, 1702, 1747, 1765
TseFI GTSAC 3 cut(s) 478, 1714, 1738
TseI GCWGC 8 cut(s) 29, 35, 64, 452, 820, 1185, 1188, 1390
Tsp45I GTSAC 3 cut(s) 478, 1714, 1738
TspGWI ACGGA 2 cut(s) 118, 1601
TspRI CASTG 8 cut(s) 213, 547, 813, 1017, 1668, 1702, 1747, 1765
Tth111I GACNNNGTC 1 cut(s) 331
VpaK11BI GGWCC 4 cut(s) 59, 421, 605, 839
VspI ATTAAT 1 cut(s) 798
XapI RAATTY 6 cut(s) 134, 251, 764, 894, 1196, 1685
XceI RCATGY 4 cut(s) 473, 919, 1362, 1447
XcmI CCANNNNNNNNNTGG 1 cut(s) 213
XhoI CTCGAG 1 cut(s) 920
XmiI GTMKAC 1 cut(s) 1440
XspI CTAG 1 cut(s) 449
ZrmI AGTACT 1 cut(s) 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.