FvH4_1g29510
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
22686778 .. 22689043
2266 bp
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UTR
Exon/CDS
Intron
FvH4_1g29510.t7

Sequence Viewer

Length: 300 bp
ATGACCACAAGATGCGAGGTCAAGGTCACCTCAAAGAAGAGAGAAGGAGGAAGGAGGAGAGACGTCGAGTGGAGAAAACAATTCCAGATTTTGGAGATGAGGCAAGCTTCTGAAGGCATTCATCACATACCTGAAGTTATAGAAGCCAAAGTAGAGAACATTAAGGAGGTCTGGAGCATTCTGCTAGCTGGAAGCAATGCAAGAATTAGCCCTTCGAAGCTGGACCTGAATGAGAGTTTAAGTTCTCGAAACTTTGCAGCATGGGTTCTAAACTTTGAATTAGGTCTAGTAAACAAGTGA

Protein Analysis

100

Amino Acids

11.4

Weight (kDa)

9.57

Isoelectric Point (pI)

55.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 66
AccB7I CCANNNNNTGG 1 cut(s) 91
AcuI CTGAAG 2 cut(s) 132, 153
AcyI GRCGYC 1 cut(s) 63
AfiI CCNNNNNNNGG 1 cut(s) 91
AgsI TTSAA 1 cut(s) 278
AluBI AGCT 3 cut(s) 107, 188, 220
AluI AGCT 3 cut(s) 107, 188, 220
Alw26I GTCTC 1 cut(s) 54
ApeKI GCWGC 1 cut(s) 257
Asp700I GAANNNNTTC 1 cut(s) 117
AspS9I GGNCC 1 cut(s) 223
AsuHPI GGTGA 1 cut(s) 19
AsuII TTCGAA 1 cut(s) 215
AsuNHI GCTAGC 1 cut(s) 184
AvaII GGWCC 1 cut(s) 223
BbvI GCAGC 1 cut(s) 269
BcoDI GTCTC 1 cut(s) 54
BfaI CTAG 2 cut(s) 185, 287
BisI GCNGC 1 cut(s) 258
BlsI GCNGC 1 cut(s) 259
Bme18I GGWCC 1 cut(s) 223
BmgT120I GGNCC 1 cut(s) 223
BmsI GCATC 1 cut(s) 2
BmtI GCTAGC 1 cut(s) 188
BpmI CTGGAG 1 cut(s) 193
Bpu14I TTCGAA 1 cut(s) 215
BsaHI GRCGYC 1 cut(s) 63
Bsc4I CCNNNNNNNGG 1 cut(s) 91
Bse3DI GCAATG 1 cut(s) 202
BseLI CCNNNNNNNGG 1 cut(s) 91
BseMI GCAATG 1 cut(s) 202
BseRI GAGGAG 1 cut(s) 70
BseXI GCAGC 1 cut(s) 269
BslI CCNNNNNNNGG 1 cut(s) 91
BsmAI GTCTC 1 cut(s) 54
BsmBI CGTCTC 1 cut(s) 54
BsmI GAATGC 2 cut(s) 117, 177
Bsp119I TTCGAA 1 cut(s) 215
BspOI GCTAGC 1 cut(s) 188
BspT104I TTCGAA 1 cut(s) 215
BsrDI GCAATG 1 cut(s) 202
BssNI GRCGYC 1 cut(s) 63
Bst6I CTCTTC 1 cut(s) 32
BstACI GRCGYC 1 cut(s) 63
BstBI TTCGAA 1 cut(s) 215
BstC8I GCNNGC 2 cut(s) 105, 186
BstEII GGTNACC 1 cut(s) 25
BstMAI GTCTC 1 cut(s) 54
BstPI GGTNACC 1 cut(s) 25
BstV1I GCAGC 1 cut(s) 269
Cac8I GCNNGC 2 cut(s) 105, 186
Cfr13I GGNCC 1 cut(s) 223
CviAII CATG 1 cut(s) 261
CviJI RGCY 5 cut(s) 107, 146, 188, 210, 220
CviKI_1 RGCY 5 cut(s) 107, 146, 188, 210, 220
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 223
Eco57I CTGAAG 2 cut(s) 132, 153
Eco91I GGTNACC 1 cut(s) 25
EcoO65I GGTNACC 1 cut(s) 25
Esp3I CGTCTC 1 cut(s) 54
FaeI CATG 1 cut(s) 264
FaiI YATR 3 cut(s) 128, 140, 262
FatI CATG 1 cut(s) 260
Fnu4HI GCNGC 1 cut(s) 258
Fsp4HI GCNGC 1 cut(s) 258
FspBI CTAG 2 cut(s) 185, 287
GluI GCNGC 1 cut(s) 258
GsuI CTGGAG 1 cut(s) 193
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 1 cut(s) 264
HindIII AAGCTT 1 cut(s) 105
HphI GGTGA 1 cut(s) 19
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 1 cut(s) 112
Hpy188III TCNNGA 3 cut(s) 85, 172, 246
Hpy8I GTNNAC 1 cut(s) 292
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 4 cut(s) 38, 45, 107, 222
HpyCH4IV ACGT 1 cut(s) 63
HpyCH4V TGCA 2 cut(s) 200, 257
HpySE526I ACGT 1 cut(s) 63
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 1 cut(s) 264
LmnI GCTCC 1 cut(s) 174
LpnPI CCDG 6 cut(s) 98, 144, 157, 174, 206, 239
Lsp1109I GCAGC 1 cut(s) 269
LweI GCATC 1 cut(s) 2
MaeI CTAG 2 cut(s) 185, 287
MaeII ACGT 1 cut(s) 63
MaeIII GTNAC 1 cut(s) 25
MboII GAAGA 1 cut(s) 49
MluCI AATT 3 cut(s) 80, 204, 278
MnlI CCTC 6 cut(s) 10, 40, 41, 48, 93, 160
MroXI GAANNNNTTC 1 cut(s) 117
MseI TTAA 2 cut(s) 162, 239
Mva1269I GAATGC 2 cut(s) 117, 177
NheI GCTAGC 1 cut(s) 184
NlaIII CATG 1 cut(s) 264
NmuCI GTSAC 1 cut(s) 25
NspV TTCGAA 1 cut(s) 215
PctI GAATGC 2 cut(s) 117, 177
PdmI GAANNNNTTC 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 91
PkrI GCNGC 1 cut(s) 259
PspEI GGTNACC 1 cut(s) 25
PspPI GGNCC 1 cut(s) 223
SaqAI TTAA 2 cut(s) 162, 239
SatI GCNGC 1 cut(s) 258
Sau96I GGNCC 1 cut(s) 223
SfaNI GCATC 1 cut(s) 2
SfuI TTCGAA 1 cut(s) 215
SinI GGWCC 1 cut(s) 223
Sse9I AATT 3 cut(s) 80, 204, 278
SspMI CTAG 2 cut(s) 185, 287
TaiI ACGT 1 cut(s) 66
TaqI TCGA 3 cut(s) 66, 215, 247
TasI AATT 3 cut(s) 80, 204, 278
Tru1I TTAA 2 cut(s) 162, 239
Tru9I TTAA 2 cut(s) 162, 239
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 1 cut(s) 257
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 110
Van91I CCANNNNNTGG 1 cut(s) 91
VpaK11BI GGWCC 1 cut(s) 223
XmnI GAANNNNTTC 1 cut(s) 117
XspI CTAG 2 cut(s) 185, 287
ZraI GACGTC 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.